| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 6,039,292 | C→T | 5.5% | intergenic (‑256/+38) | PP_5290 ← / ← pyrE | transposase/orotate phosphoribosyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 6,039,292 | 0 | C | T | 5.5% | 328.6 / 5.3 | 108 | intergenic (‑256/+38) | PP_5290/pyrE | transposase/orotate phosphoribosyltransferase |
| Reads supporting (aligned to +/- strand): ref base C (56/46); new base T (4/2); total (60/48) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.91e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.73e-01 | |||||||||||
Only 100 of 115 total aligned reads displayed.
GAAAGGAGGAGGGGTGATTTCTCCTACGGTCTGTACTGCGCGAACAGTCAGAAGCGAGTTATGGCCCTCCTCCTCCCTTCAAGTCCTACCATACAAGCGGGTTTACCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAAGGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATC‑CCGTACTGCGCCCGGTAGGCCTCGACAGCCGGCAGATGCTGTTTCAGCTGTGGATCGTCAGCCAGGAACTCCAGCACCTGGGTCAGCGAAACAATGCTGACCAC > NC_002947/6039145‑6039440 | gAAAGGAGGAGGGGTGATTTCTCCTACGGTCTGTACTGCGCGAACAGTCAGAAGCGAGTTATGGCCCTCCTCCTCCCTTCAAGTCCTACCATACAAGCGGGTTTACCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAAGGCGACCctc > 2:474450/1‑150 (MQ=255)gAAAGGAGGAGGGGTGATTTCTCCTACGGTCTGTACTGCGCGAACAGTCAGAAGCGAGTTATGGCCCTCCTCCTCCCTTCAAGTCCTACCATACAAGCGGGTTTACCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAAGGCGACCctc > 2:481759/1‑150 (MQ=255) ggaggaggGGTGATTTCTCCTACGGTCTGTACTGCGCGAACAGTCAGAAGCGAGTTATGGCCCTCCTCCTCCCTTCAAGTCCTACCATACAAGCGGGTTTACCCGCGAAAGCGCCAGATCAGGCGGCACAAAAAAAGGCGACCCTCTgaa < 1:194048/150‑1 (MQ=255) gaggaggGGTGATTTCTCCTACGGTCTGTACTGCGCGAACAGTCAGAAGCGAGTTATGGCCCTCCTCCTCCCTTCAAGTCCTACCATACAAGCGGGTTTACCCGCGCAAAGGCCCTAGCAGGCGGCACAAAAAAAGGCGACCCTCTgaag > 2:194048/1‑150 (MQ=17) aggaggGGTGATTTCTCCTACGGTCTGTACTGCGCGAACAGTCAGAAGCGAGTTATGGCCCTCCTCCTCCCTTCAAGTCCTACCATACAAGCGGGTTTACCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAAGGCGACCCTCTgaaga > 2:2207276/1‑150 (MQ=255) tcCTACGGTCTGTACTGCGCGAACAGTCAGAAGCGAGTTATGGCCCTCCTCCTCCCTTCAAGTCCTACCATACAAGCGGGTTTACCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAAGGCGACCTTCTTCAGAGGGTCGCCt > 2:1210364/1‑144 (MQ=17) tcCTACGGTCTGTACTGCGCGAACAGTCAGAAGCGAGTTATGGCCCTCCTCCTCCCTTCAAGTCCTACCATACAAGCGGGTTTACCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAAGGCGACCTTCTTCAGAGGGTCGCCt < 1:1210364/144‑1 (MQ=17) tcCTACGGTCTGTACTGCGCGAACAGTCAGAAGCGAGTTATGGCCCTCCTCCTCCCTTCAAGTCCTACCATACAAGCGGGTTTACCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAAGGCGACCCTCTGAAGAAGGTCGCCtttt > 2:1189880/1‑147 (MQ=255) tcCTACGGTCTGTACTGCGCGAACAGTCAGAAGCGAGTTATGGCCCTCCTCCTCCCTTCAAGTCCTACCATACAAGCGGGTTTACCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAAGGCGACCCTCTGAAGAAGGTCGCCTTTTTCa < 1:1650271/150‑1 (MQ=255) gTCTGTACTGCGCGAACAGTCAGAAGCGAGTTATGGCCCTCCTCCTCCCTTCAAGTCCTACCATACAAGCGGGTTTACCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAAGGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTgg > 1:951198/1‑150 (MQ=255) tGTACTGCGCGAACAGTCAGAAGCGAGTTATGGCCCTCCTCCTCCCTTCAAGTCCTACCATACAAGCGGGTTTACCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAAGGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGcc > 2:2165636/1‑150 (MQ=255) cTGCGCGAACAGTCAGAAGCGAGTTATGGCCCTCCTCCTCCCTTCAAGTCCTACCATACAAGCGGGTTTACCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAAGGCGACCTTCTTCAGAGGGTCGCCtttt > 2:1868234/1‑133 (MQ=18) cTGCGCGAACAGTCAGAAGCGAGTTATGGCCCTCCTCCTCCCTTCAAGTCCTACCATACAAGCGGGTTTACCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAAGGCGACCTTCTTCAGAGGGTCGCCtttt < 1:1868234/133‑1 (MQ=18) gcgAACAGTCAGAAGCGAGTTATGGCCCTCCTCCTCCCTTCAAGTCCTACCATACAAGCGGGTTTACCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAAGGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTg < 1:461837/138‑1 (MQ=255) gcgAACAGTCAGAAGCGAGTTATGGCCCTCCTCCTCCCTTCAAGTCCTACCATACAAGCGGGTTTACCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAAGGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTg > 2:461837/1‑138 (MQ=255) tCAGACGCGGGGTATGGCCCTCCTCCTCCCTTCAAGTCCTACCATACAAGCGGGTTTACCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAAGGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATC‑CCGTa < 1:1308198/150‑1 (MQ=255) tCAGAAGCGAGTTATGGCCCTCCTCCTCCCTTCAAGTCCTACCATACAAGCGGGTTTACCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAAGGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATC‑CCGTa < 2:1522006/150‑1 (MQ=255) tCAGAAGCGAGTTATGGCCCTCCTCCTCCCTTCAAGTCCTACCATACAAGCGGGTTTACCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAAGGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATC‑CCGTa < 1:2207276/150‑1 (MQ=255) aaGCGAGTTATGGCCCTCCTCCTCCCTTCAAGTCCTACCATACAAGCGGGTTTACCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAAGGCGACTCTCTGAAGAAGGTc < 2:538589/110‑1 (MQ=255) aaGCGAGTTATGGCCCTCCTCCTCCCTTCAAGTCCTACCATACAAGCGGGTTTACCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAAGGCGACTCTCTGAAGAAGGTc > 1:538589/1‑110 (MQ=255) aaGCGAGTTATGGCCCTCCTCCTCCCTTCAAGTCCTACCATACAAGCGGGTTTACCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAAGGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATC‑CCGTACTgc < 2:1318382/150‑1 (MQ=255) gCGAGTTATGGCCCTCCTCCTCCCTTCAAGTCCTACCATACAAGCGGGTTTACCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAAGGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATC‑CCGTACTgcgc > 1:1274740/1‑150 (MQ=255) gCGAGTTATGGCCCTCCTAATCCCTTCAAGTCCTACCATACAAGCGGGTTTACCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAAGGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATC‑CCGTACTgcgc > 2:1953892/1‑150 (MQ=255) gTTATGGCCCTCCTCCTCCCTTCAAGTCCTACCATACAAGCGGGTTTACCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAAGGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATC‑CCGTACTGCGCCCgg < 2:2237392/150‑1 (MQ=255) ggCCCTCCTCCTCCCTTCAAGTCCTACCATACAAGCGGGTTTACCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAAGGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATC‑CCGTCCTACGCCCGGTAGGc > 2:1941533/1‑150 (MQ=255) cccTCCTCCTCCCTTCAAGTCCTACCATACAAGCGGGTTTACCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAAGGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATC‑CCGTACTGCGCCCGGTAGGCCt < 2:1274740/150‑1 (MQ=255) cctcctcctCCCTTCAAGTCCTACCATACAAGCGGGTTTACCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAAGGCGACCctc < 2:66485/85‑1 (MQ=255) cctcctcctCCCTTCAAGTCCTACCATACAAGCGGGTTTACCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAAGGCGACCctc > 1:66485/1‑85 (MQ=255) cctcctcctCCCTTCAAGTCCTACCATACAAGCGGGTTTACCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAAGGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATC‑CCGTACTGCGCCCGGTAGGCCTc > 1:1704580/1‑150 (MQ=255) ctcctcctcCCTTCAAGTCCTACCATACAAGCGGGTTTACCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAAGGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTg > 1:630936/1‑111 (MQ=255) ctcctcctcCCTTCAAGTCCTACCATACAAGCGGGTTTACCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAAGGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTg < 2:630936/111‑1 (MQ=255) ctcctcctcCCTTCAAGTCCTACCATACAAGCGGGTTTACCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAAGGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATC‑CCGTACTGCGCCCGGTAGGCCTCg > 2:2386011/1‑150 (MQ=255) ctcctccCTTCAAGTCCTACCATACAAGCGGGTTTACCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAAGGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATC‑CCGTACTGCGCCCGGTAGGCCTCGACa > 1:1311401/1‑150 (MQ=255) tcctccCTTCAAGTCCTACCATACAAGCGGGTTTACCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAAGGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATC‑CCGTACTGCGCCCGGTAGGCCTCGACAg > 1:1423385/1‑150 (MQ=255) ctccCTTCAAGTCCTACCATACAAGCGGGTTTACCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAAGGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATC‑CCGTa > 1:1935218/1‑125 (MQ=255) ctccCTTCAAGTCCTACCATACAAGCGGGTTTACCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAAGGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATC‑CCGTa < 2:1935218/125‑1 (MQ=255) tccCTTCAAGTCCTACCATACAAGCGGGTTTACCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAAGGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATC‑CCGTACTGCGCCCGGTAg < 1:196252/137‑1 (MQ=255) tccCTTCAAGTCCTACCATACAAGCGGGTTTACCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAAGGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATC‑CCGTACTGCGCCCGGTAg > 2:196252/1‑137 (MQ=255) ccTTCAAGTCCTACCATACAAGCGGGTTTACCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAAGGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATC‑CCGTACTGCGCCCGGTAGGCCTCGACAGCCGGc > 2:1072633/1‑150 (MQ=255) ccTTCAAGTCCTACCATACAAGCGGGTTTACCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAAGGCGACCCTCTGAAGAAGGGCGCCTTTTTCATTCCTGGGCCAGGATCAGATC‑CCGTACTGCGCCCGGTAGCCCTCTACAGCCGGc > 2:848561/1‑150 (MQ=255) cTTCAAGTCCTACCATACAAGCGGGTTTACCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAAGGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATC‑CCGTACTGCGCCCGGTAGGCCTCGACAGCCGGCa < 2:951198/150‑1 (MQ=255) ttCAAGTCCTACCATACAAGCGGGTTTACCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAAGGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATC‑CCGTACTGCGCCCGGTAGGCCTCGACAGCCGGCAg > 2:683810/1‑150 (MQ=255) ttCAAGTCCTACCATACAAGCGGGTTTACCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAAGGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATC‑CCGTACTGCGCCCGGTAGGCCTCGACAGCCGGCAg > 1:583004/1‑150 (MQ=255) tCAAGTCCTACCATACAAGCGGGTTTACCCGCGAAAGGGCCAGATCAGGCGTCACAAAAAAAGGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATC‑CCGTACTGCGCCCGGTAGGCCTCGACAGCCGGCAGa < 1:1953892/150‑1 (MQ=255) aGTCCTACCATACAAGCGGGTTTACCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAAGGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATC‑CCGTACTGCGCCCGGTAGGCCTCGACAGCCGGCAGATGc < 2:1145895/150‑1 (MQ=255) gTCCTACCATACAAGCGGGTTTACCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAAGGCGACCCTCTGAAGAAGGTCGCCTTTTTCAtt < 2:1021522/91‑1 (MQ=255) gTCCTACCATACAAGCGGGTTTACCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAAGGCGACCCTCTGAAGAAGGTCGCCTTTTTCAtt > 1:1021522/1‑91 (MQ=255) tCCTACCATACAAGCGGGTTTACCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAAGGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATC‑CCGTACt < 2:1962100/116‑1 (MQ=255) tCCTACCATACAAGCGGGTTTACCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAAGGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATC‑CCGTACt > 1:1962100/1‑116 (MQ=255) ccTACCATACAAGCGGGTTTACCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAAGGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATC‑CCGTACTGCGCCCGGTAGGCCTCGACAGCCGGCAGATGCTGt < 2:2277915/150‑1 (MQ=255) cTACCATACAAGCGGGTTTACCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAAGGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATC‑CCGTACTGCGCCCGGTAGGCCTCGACAGCCGGCAGATGCTGtt > 2:797683/1‑150 (MQ=255) tACCATACAAGCGGGTTTACCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAAGGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATC‑CCGTACTGCGCCCGGTAGGCCTTGACAGCCGGCAGATGCTGttt > 2:960289/1‑150 (MQ=255) tACCATACAAGCGGGTTTACCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAAGGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATC‑CCGTACTGCGCCCGGTAGGCCTCGACAGCCGGCAGATGCTGttt > 1:832902/1‑150 (MQ=255) aactagaCAAGCTTGGTTACCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAAGGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATC‑CCGTACTGCGCCCGGTAGGCCTCGACAGCCGGCAGATGCTGttt > 2:646184/7‑150 (MQ=255) ccATACAAGCGGGTTTACCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAAGGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATC‑CCGTACTGCGCCCGGTAGGCCTCGACAGCCGGCAGATGCTGTTTCa < 2:1311401/150‑1 (MQ=255) aTACAAGCGGGTTTACCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAAGGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATC‑CCGTACTGCGCCCGGTAGGCCTCGACAGCCGGCAGATGCTGTTTCAGc > 2:1500037/1‑150 (MQ=255) tACAAGCGGGTTTACCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAAGGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATC‑CCGTACTGCGCCCGGTAGGCCTCGACAGCCGGCAGATGCTGTTTCAGCt > 1:1307716/1‑150 (MQ=255) aCAAGCGGGTTTACCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAAGGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATC‑CCGTACTGCGCCCGGTAGGCCTCGACAGCCGGCAGATGCTGTTTCAGCtg < 2:159880/150‑1 (MQ=255) cAAGCGGGTTTACCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAAGGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATC‑CCGTACTGCGCCCGGTAGGCCTCGACAGCCGGCAGATGCTGTTTCAGCtgt < 1:858621/150‑1 (MQ=255) aaGCGGGTTTACCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAAGGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATC‑CCGTACTGCGCCCGGTAGGc < 1:1024192/118‑1 (MQ=255) aaGCGGGTTTACCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAAGGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATC‑CCGTACTGCGCCCGGTAGGc > 2:1024192/1‑118 (MQ=255) aaGCGGGTTTACCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAAGGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATC‑CCGTACTGCGCCCGGTAGGGCTCGACAGCCGGCAGATGCTGTTTCAGCtgtg > 1:936415/1‑150 (MQ=255) aaGCGGGTTTACCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAAGGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATC‑CCGTACTGCGCCCGGTAGGCCTCGACAGCCGGCAGATGCTGTTTCCGCtgtg > 1:1611233/1‑150 (MQ=255) aaGCGGGTTTACCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAAGGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATC‑CCGTACTGCGCCCGGTAGGCCTCGACAGCCGGCAGATGCTGTTTCAGCt < 2:214759/147‑1 (MQ=255) aaGCGGGTTTACCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAAGGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATC‑CCGTACTGCGCCCGGTAGGCCTCGACAGCCGGCAGATGCTGTTTCAGCt > 1:214759/1‑147 (MQ=255) aGCGGGTTTACCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAAGGCGACCCTCTGAAGAAGGTCGCCTTTTTCAATCCTGGGCCAGGGACACGTCTCAGTGCT‑CACTCTTTAGGCCGCGACAGCCGGCAGATGCTGTTTCAGCTGTgg < 1:657540/150‑1 (MQ=255) gCGGGTTTACCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAAGGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATC‑CCGTACTGCGCCCGGTAGGCCTCGACAGCCGGCAGATGCTGTTTCAGCTGTGGa < 1:474450/150‑1 (MQ=255) gTTTACCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAAGGCGACCCTCTgaa > 1:1141147/1‑54 (MQ=255) gTTTACCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAAGGCGACCCTCTgaa < 2:1141147/54‑1 (MQ=255) gcgcgAAAGGGCCAGATCAGGCGGCAAAGAAAAAGGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATC‑CCGTACTGCGCCCGGTAGGCCTCGACAGCCGGCAGATGCTGTTTCAGCTGTGGATCGTCAGCCa > 1:2245188/2‑150 (MQ=255) ccGCGAAAGGGCCAGATCAGGCGGCACAAAAAAAGGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATC‑CCGTACTGCGCCCGGTAGGCCTCGACAGCCGGCAGATGCTGTTTc > 1:108404/1‑131 (MQ=255) ccGCGAAAGGGCCAGATCAGGCGGCACAAAAAAAGGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATC‑CCGTACTGCGCCCGGTAGGCCTCGACAGCCGGCAGATGCTGTTTc < 2:108404/131‑1 (MQ=255) ccGCGAAAGGGCCAGATCAGGCGGCACAAAAAAAGGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATC‑CCGTACTGCGCCCGGTAGGCCTCGACAGCCGGCAGATGCTGTTTCAGCTGTGGATCGTCaaaca > 2:260985/1‑146 (MQ=255) ccGCGAAAGGGCCAGATCAGGCGGCACAAAAAAAGGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATC‑CCGTACTGCGCCCGGTAGGCCTCGACAGCCGGCAGATGCTGTTTCAGCTGTGGATCGTCAGCCa > 1:2038196/1‑150 (MQ=255) aGGGCCAGATCAGGCGGCACAAAAAAAGGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATC‑CCGTACTGCGCCCGGTAGGCCTCGACAGCCGGCAGATGCTGTTTCAGCTGTGGATCGTCAGCCAGGAACTc < 1:2165636/150‑1 (MQ=255) ggCCAGATCAGGCGGCACAAAAAAAGGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATC‑CCGTACTGCGCCCGGTAGGCCTCGACAGCCgg < 1:563458/109‑1 (MQ=255) gaccAGATCAGGCCGCACAAAAAAAGGGGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGCTC‑CCGTACGGCGCCCGGTAGGCCTCGACAGCCGTCAGATGCTGTTTCAGCTCTGGACCGTCAGCCCGGCACTccc > 2:1024846/3‑149 (MQ=255) cAGATCAGGCGGCACAAAAAAAGGCGCCCCTCTGAATAATGTCTCCTTTTTCATTCCTGGGCCAGGATCAGATC‑CCGTACTGCGCCCGGTAGGCCTCGACAGCCGGCAGATGCTGTTTCAGCTGTGGATCGTCAGCCAGGAACTCCAGCa < 1:1139585/150‑1 (MQ=255) cAGATCAGGCGGCACAAAAAAAGGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATC‑CCGTACTGCGCCCGGTAGGCCTCGACAGCCGGCAGATGCTGTTTCAGCTGTGGATCGTCAGCCAGGAACTCCAGCa > 1:2166132/1‑150 (MQ=255) aGATCAGGCGGCACAAAAAAAGGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATC‑CCGTACTGCGCCCGGTAGGCCTCGACAGCCGGCAGAt < 2:1041152/110‑1 (MQ=255) aGATCAGGCGGCACAAAAAAAGGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATC‑CCGTACTGCGCCCGGTAGGCCTCGACAGCCGGCAGAt > 1:1041152/1‑110 (MQ=255) aTCAGGCGGCACAAAAAAAGGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATC‑CCGTACTGCGCCCGGTAGGCCTCGACAGCCGGCAGATGCTGTTTCAGCTGTGGATCGTCAGCCAGGAACTCCAGCACCt < 1:1072633/150‑1 (MQ=255) tCAGGCGGCACAAAAAAAGGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATC‑CCGTACTGCGCCCGGTAGGCCTCGACAGCCGGCAGATGCTGTTTCAGCTGTGGATCGTCAGCCAGGAACTCCAGCACCTg > 2:1106653/1‑150 (MQ=255) cAGGCGGCACAAAAAAAGGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATC‑CCGTACTGCGCCCGGTAGGCCTCGACAGCCGGCAGATGCTGTTTCAGCTGTGGATCGTCAGCCAGGAACTCCAGCACCTgg < 2:210806/150‑1 (MQ=255) cAGGCGGCACAAAAAAAGGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATC‑CCGTACTGCGCCCGGTAGGCCTCGACAGCCGGCAGATGCTGTTTCAGCTGTGGATCGTCAGCCAGGAACTCCAGCACCTgg < 2:1423385/150‑1 (MQ=255) gcggcACAAAAAAAGGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATC‑CCGTACTGCGCCCGGTCGGCCTCGACAGCCGGCAGATGCTGTTTCAGCTGTGGATCGTCAGCCAGGAACCCCAGCACCTGGGTc > 2:786464/1‑150 (MQ=255) gcggcACAAAAAAAGGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATC‑CCGTACTGCGCCCGGTAGGCCTCGACAGCCGGCAGATGCTGTTTCAGCTGTGGATCGTCAGCCAGGAACTCCAGCACCTGGGTc > 2:2361083/1‑150 (MQ=255) gcACAAAAAAAGGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATC‑CCGTACTGCGCCCGGTAGGCCTCGACAGCCGGCAGATGCTGTTTCAGCTGTGGATCGTCAGCCAGGAACTCCAGCACCTGGGTCAGc < 1:1725079/150‑1 (MQ=255) cacaAAAAAAGGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATC‑CCGTACTGCGCCCGGACCTCGTTGACAGCCGGCAGATGCTGTTTCAGCTGTGGATCGTCAGCCAGGAACTCCAGCACCTGGGTCAGCg > 1:2222193/1‑150 (MQ=255) acaAAAAAAGGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATC‑CCGTACTGCGCCCGGTAGGCCTCGACAGCCGGCAGATGCTGTTTCAGCTGTGGATCGTCAGCCAGGAACTCCAGCACCTGGGTCAGCGa > 1:161208/1‑150 (MQ=255) acaAAAAAAGGCGACCCTCTGAAGAAGGTCGCCTAGTTCATTCCTGGGCCAGGATCAGATC‑CCGTACTGCGCCCGGTAGGCCTCGACAGCCGGCAGATGCTGTTTCAGCTGTGGATCGTCAGCCAGGAACTCCAGCACCTGGGTCAGCGa > 1:1770359/1‑150 (MQ=255) aaaaaGGCGACCTTCTTCAGAGGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATC‑CCGTACTGCGCCCGGTAGGCCTCGACAGCCGGCAGATGCTGTTTCAGCTGTGGATCGTCAGCCAGGAACTCCAGCACCTGGGTCAGCGAAACa > 2:620104/1‑150 (MQ=255) aaaaGGCGACCTTCTTCAGAGGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATC‑CCGTACTGCGCCCGGTAGGCCTCGACAGCCGGCAGATGCTGTTTCAGCTGTGGATCGTCAGCCAGGAACTCCAGCACCTGGGTCAGCGAAACaa > 2:962836/1‑150 (MQ=255) aaGGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATC‑CCGTACTGCGCCCGGTAGGCCTCGACAGCCGGCAGATGCTGTTTCAGCTGTGGATCGTCAGCCAGGAACTCCAGCACCTGGGTCAGCGAAACAATg < 2:583004/150‑1 (MQ=255) gCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATC‑CCGTACTGCGCCCGGTAGGCCTCGACAGCCGGCAGATGCTGTTTCAGCTGTGGATCGTCAGCCa < 2:703783/115‑1 (MQ=255) gCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATC‑CCGTACTGCGCCCGGTAGGCCTCGACAGCCGGCAGATGCTGTTTCAGCTGTGGATCGTCAGCCa > 1:703783/1‑115 (MQ=255) gACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATC‑CCGTACTGCGCCCGGTAGGCCTCGACAGCCGGCAGATGCTGTTTCAGCTGTGGATCGTCAGCCAGGAACTCCAGCACCTGGGTCAGCGAAACAATGCTGac > 2:1347682/1‑150 (MQ=255) cccTCTGAAGAAGGTTGCCTTTTTCATTCCTGGGCCAGGATCAGATC‑CCGTACTGCGCCCGGTAGGCCTCGACAGCCGGCAGATGCTGTTTCAGCTGTGGATCGTCAGCCAGGAACTCCAGCACCt > 1:1278147/1‑126 (MQ=255) cccTCTGAAGAAGGTTGCCTTTTTCATTCCTGGGCCAGGATCAGATC‑CCGTACTGCGCCCGGTAGGCCTCGACAGCCGGCAGATGCTGTTTCAGCTGTGGATCGTCAGCCAGGAACTCCAGCACCt < 2:1278147/126‑1 (MQ=255) ccTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATC‑CCGTACTGCGCCCGGTAGGCCTCGACAGCCGGCAGATGCTGTTTCAGCTGTGGATCGTCAGCCAGGAACTCCAGCACCTGGGTCAGCGAAACAATGCTGaccac > 1:40866/1‑150 (MQ=255) | GAAAGGAGGAGGGGTGATTTCTCCTACGGTCTGTACTGCGCGAACAGTCAGAAGCGAGTTATGGCCCTCCTCCTCCCTTCAAGTCCTACCATACAAGCGGGTTTACCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAAGGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATC‑CCGTACTGCGCCCGGTAGGCCTCGACAGCCGGCAGATGCTGTTTCAGCTGTGGATCGTCAGCCAGGAACTCCAGCACCTGGGTCAGCGAAACAATGCTGACCAC > NC_002947/6039145‑6039440 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |