| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 6,040,850 | T→A | 5.4% | intergenic (+19/+15) | PP_5292 → / ← PP_5293 | catabolite repression control protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 6,040,850 | 0 | T | A | 5.4% | 402.2 / 9.9 | 129 | intergenic (+19/+15) | PP_5292/PP_5293 | catabolite repression control protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (63/58); new base A (3/4); total (67/62) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.12e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.58e-01 | |||||||||||
Only 100 of 130 total aligned reads displayed.
TCGGTTCGACTACCAGATCCTCACCCCGGGCCTGCGCCGCTTCGTGCGCAACGCTCGCCTGCCGCGTCAGCCACGCTTCTCCCAGCATGCACCGCTGATCGTCGACTATGACTGGACGCTGA‑CCATCTAAAAGGCCATTGGGGCTGCATTGCAGCCCCAATGGTTATTTGATCGGCCGCCAGATCATCGGGTAGCGATAAGGCTTGCCCTCATTCGCCCGCACCGCCGCGATGATGATCAATATCATCACTGCCACCGTGAGCATGGCAAACAGCACCAGCCCGATAAACACGAAC > NC_002947/6040702‑6040997 | tCGGTTCGACTACCAGATCCTCACCCCGGGCCTGCGCCGCTTCGTGCGCAACGCTCGCCTGCCGCGTCAGCCACGCTTCTCCCAGCATGCACCGCTGATCGTCGACTATGACTGGACGCTGA‑CCATCTAAAAGGCCATTGGGGCTGCAtt > 2:755450/1‑150 (MQ=255) cGGTTCGACTACCAGATCCTCACCCCGGGCCTGCGCCGCTTCGTGCGCAACGCTCGCCTGCCGCGTCAGCCACGCTTCTCCCAGCATGCACCGCTGATCGTCGACTATGACTGGACGCTGA‑CCATCTAAAAGGCCATTGGGGCTGCATTg < 2:584236/150‑1 (MQ=255) cGGTTCGACTACCAGATCCTCACCCCGGGCCTGCGCCGCTTCGTGCGCAACGCTCGCCTGCCGCGTCAGCCACGCTTCTCCCAGCATGCACCGCTGATCGTCGACTATGACTGGACGCTGA‑CCATCTAAAAGGCCATTGGGGCGGCATTg > 1:115268/1‑150 (MQ=255) gTTCGACTACCAGATCCTCACCCCGGGCCTGCGCCGCTTCGTGCGCAACGCTCGCCTGCCGCGTCAGCCACGCTTCTCCCAGCATGCACCGCTGATCGTCGACTATGACTGGACGCTGA‑CCATCTAAAAGGCCATTGGGGCTGCATTGCa > 1:1564814/1‑150 (MQ=255) cGACTACCAGATCCTCACCCCGGGCCTGCGCCGCTTCGTGCGCAACGCTCGCCTGCCGCGTCAGCCACGCTTCTCCCAGCATGCACCGCTGATCGTCGACTATGACTGGACGCTGA‑CCATCTAAAAGGCCATTGGGGCTGCATTGCAGcc > 1:872522/1‑150 (MQ=255) aCTACCAGATCCTCACCCCGGGCCTGCGCCGCTTCGTGCGCAACGCTCGCCTGCCGCGTCAGCCACGCTTCTCCCAGCATGCACCGCTGATCGTCGACTATGACTGGACGCTGA‑CCATCTAAAAGGCCATTGGGGCTGCATTGCAGcccc < 2:1490996/150‑1 (MQ=255) aCTACCAGATCCTCACCCCGGGCCTGCGCCGCTTCGTGCGCAACGCTCGCCTGCCGCGTCAGCCACGCTTCTCCCAGCATGCACCGCTGATCGTCGACTATGACTGGACGCTGA‑CCATCTAAAAGGCCATTGGGGCTGCAATGCAGcccc < 2:180065/150‑1 (MQ=255) aCTACCAGATCCTCACCCCGGGCCTGCGCCGCGTCGTGCGCAACGCTCCGCTGCCGCGTCAGCCACGCTTCTCCCAGCATGCACCGCTGATCGGCGACTATGACTGGACGCTGA‑CCATCTAAAAGGCTATTGGGGCTGCAATGCAGcccc < 1:308134/150‑1 (MQ=255) aCCAGATCCTCACCCCGGGCCTGCGCCGCTTCGTGCGCAACGCTCGCCTGCCGCGTCAGCCACGCTTCTCCCAGCATGCACCGCTGATCGTCGACTATGACTGGACGCTGA‑CCATCTAAAAGGCCATTGGGGCTGCAATGCAGCCCCAAt < 2:2239557/150‑1 (MQ=255) aCCAGATCCTCACCCCGGGCCTGCGCCGCTTCGTGCGCAACGCTCGCCTGCCGCGTCAGCCACGCTTCTCCCAGCATGCACCGCTGATCGTCGACTATGACTGGACGCTGA‑CCATCTAAAAGACCATTGGGGCTGCAATGCAGCCCCAAt < 2:1018002/150‑1 (MQ=255) aCCAGATACCCACCCCGGGCCTGCGCCGCTTCGTGCGCAACGCTCGCCTGCCGCGTCAGCCACGCTTCTCCCAGCATGCACCGCTGATCGTCGACTATGACTGGACGCTGA‑CCATCTAAAAGGCCATTGGGGCTGCATTGCAGCCCCAAt < 1:1308046/150‑1 (MQ=255) ccAGATCCTCACCCCGGGCCTGCGCCGCTTCGTGCGCAACGCTCGCCTGCCGCGTCAGCCACGCTTCTCCCAGCATGCACCGCTGATCGTCGACTATGACTGGACGCTGA‑CCATCTAAAAGGCCATTGGGGCTGCATTGCAGCCCCAATg > 1:1591332/1‑150 (MQ=255) ccAGATCCTCACCCCGGGCCTGCGCCGCTTCGTGCGCAACGCTCGCCTGCCGCGTCAGCCACGCTTCTCCCAGCATGCACCGCTGATCGTCGACTATGACTGGACGCTGA‑CCATCTAAAAGGCCATTGGGGCTGCATTGCAGCCCCAATg > 1:1648080/1‑150 (MQ=255) ccAGATCCTCACCCCGGGCCTGCGCCGCTTCGTGCGCAACGCTCGCCTGCCGCGTCAGCCACGCTTCTCCCAGCATGCACCGCTGATCGTCGACTATGACTGGACGCTGA‑CCATCTAAAAGGCCATTGGGGCTGCATTGCAGCCCCAATg > 2:1624075/1‑150 (MQ=255) cAGATCCTCACCCCGGGCCTGCGCCGCTTCGTGCGCAACGCTCGCCTGCCGCGTCAGCCACGCTTCTCCCAGCATGCACCGCTGATCGTCGACTATGACTGGACGCTGA‑CCATCTAAAAGGCCATTGGGGCTGCATTGCAGCCCCAATgg > 1:495874/1‑150 (MQ=255) aTCCTCACCCCGGGCCTGCGCCGCTTCGTGCGCAACGCTCGCCTGCCGCGTCAGCCACGCTTCTCCCAGCATGCACCGCTGATCGTCGACTATGACTGGACGCTGA‑CCATCTAAAAGGCCATTGGGGCTGCATTGCAGCCCCAATGGTTa > 2:1566909/1‑150 (MQ=255) tCACCCCGGGCCTGCGCCGCTTCGTGCGCAACGCTCGCCTGCCGCGTCAGCCACGCTTCTCCCAGCATGCACCGCTGATCGTCGACTATGACTGGACGCTGA‑CCATCTAAAAGGCCATTGGGGCTGCATTGCa > 1:927443/1‑133 (MQ=255) tCACCCCGGGCCTGCGCCGCTTCGTGCGCAACGCTCGCCTGCCGCGTCAGCCACGCTTCTCCCAGCATGCACCGCTGATCGTCGACTATGACTGGACGCTGA‑CCATCTAAAAGGCCATTGGGGCTGCATTGCa < 2:927443/133‑1 (MQ=255) tCACCCCGGGCCTGCGCCGCTTCGTGCGCAACGCTCGCCTGCCGCGTCAGCCACGCTTCTCCCAGCATGCACCGCTGATCGTCGACTATGACTGGACGCTGA‑CCATCTAAAAGGCCATTGGGGCTGCATTGCAGCCCCAATGGTTATTTg > 2:1474035/1‑150 (MQ=255) tCACCCCGGGCCTGCGCCGCTTCGTGCGCAACGCTCGCCTGCCGCGTCAGCCACGCTTCTCCCAGCATGCACCGCTGATCGTCGACTATGACTGGACGCTGA‑CCATCTAAAAGGCCATTGGGGCTGCATTGCAGCCCCAATGGTTATTTg > 1:398911/1‑150 (MQ=255) ccccGGGCCTGCGCCGCTTCGTGCGCAACGCTCGCCTGCCGCGTCAGCCACGCTTCTCCCAGCATGCACCGCTGATCGTCGACTATGACTGGACGCTGA‑CCATCTAAAAGGCCATTGGGGCTGCATTGCAGCCCCAATGGTTATTTGATc > 2:1144111/1‑150 (MQ=255) ccccGGGCCTGCGCCGCTTCGTGCGCAACGCTCGCCTGCCGCGTCAGCCACGCTTCTCCCAGCATGCACCGCTGATCGTCGACTATGACTGGACGCTGA‑CCATCTAAAAGGCCATTGGGGCTGCATTGCAGCCCCAATGGTTATTTGATc < 2:1856547/150‑1 (MQ=255) ccccGGGCCTGCGCCGCTTCGTGCGCAACGCTCGCCTGCCGCGTCAGCCACGCTTCTCCCAGCATGCACCGCTGATCGTCGACTATGACTGGACGCTGA‑CCATCTAAAAGGCCATTGGGGCTGCATTGCAGCCCCAATGGTTATTTGATc < 2:437504/150‑1 (MQ=255) ccccGGGCCTGCGCCGCTTCGTGCGCAACGCTCGCCTGCCGCGTCAGCCACGCTTCTCCCAGCATGCACCGCTGATCGTCGACTATGACTGGACGCTGA‑CCATCTAAAAGGCCATTGGGGCTGCATTGCAGCCCCAATGGTTATTTGATc < 1:204229/150‑1 (MQ=255) cccGGGCCTGCGCCGCTTCGTGCGCAACGCTCGCCTGCCGCGTCAGCCACGCTTCTCCCAGCATGCACCGCTGATCGTCGACTATGACTGGACGCTTT‑CGATCTAAAAGGCCATTGGGGCTGCATTGCAGCCCCAATGGTTATTTGATCg < 1:2102237/150‑1 (MQ=255) ccGGGCCTGCGCCGCTTCGTGCGCAACGCTCGCCTGCCGCGTCAGCCACGCTTCTCCCAGCATGCACCGCTGATCGTCGACTATGACTGGACGCTGA‑CCATCTAAAAGGCCATTGGGGCTGCATTGCAGc < 1:1171900/130‑1 (MQ=255) gCCTGCGCCGCTTCGTGCGCAACGCTCGCCTGCCGCGTCAGCCACGCTTCTCCCAGCATGCACCGCTGATCGTCGACTATGACTGGACGCTGA‑CCATCTAAAAGGCCATTGGGGCTGCATTGCAGCCCCAATGGTTATTTGATCGgccgc > 2:725855/1‑150 (MQ=255) tttGCGCGGCTTCGTGCGCAACGCTCGCCTGCCGCGTCAGCCACGCTTCTCCCAGCATGCACCGCTGATCGTCGACTATGCCTGGACGCTGA‑CCATCTAACAGGCAATTGGGCATTCATTGCAGTCCGGATGGTGATTTGATCGgccgcc > 2:1470806/3‑150 (MQ=255) cgccgcTTCGTGCGCAACGCTCGCCTGCCGCGTCAGCCACGCTTCTCCCAGCATGCACCGCTGATCGTCGACTATGACTGGACGCTGA‑CCATCTAAAAGGCCATTGGGGCTGCATTGCAGCCCCAATGGTTAt < 2:910259/133‑1 (MQ=255) cgccgcTTCGTGCGCAACGCTCGCCTGCCGCGTCAGCCACGCTTCTCCCAGCATGCACCGCTGATCGTCGACTATGACTGGACGCTGA‑CCATCTAAAAGGCCATTGGGGCTGCATTGCAGCCCCAATGGTTAt > 1:910259/1‑133 (MQ=255) cTTCGTGCGCAACGCTCGCCTGCCGCGTCCACCACGCTTCTCCCAGCAAGCACCGCTGATCGGCGACTATGACTGGACGCTGA‑CCATCTAAAAGGCCATTGCGGGTAGATGGTAGCCCCAATGGTTATTTGATCGGCCGCCAGATCATCg < 1:1624075/150‑1 (MQ=255) ttCGTGCGCAACGCTCGCCTGCCGCGTCAGCCACGCTTCTCCCAGCATGCACCGCTGATCGTCGACTATGACTGGACGCTGA‑CCATCTAAAAGGCCATTGGGGCTGCATTGCAGCCCCAATGGTTATTTGATCGGCCGCCAGATCATCgg < 1:1436520/150‑1 (MQ=255) tGCACAACGCTCGCCTGCCGCGTCAGCCACGCTTCTCCCAGCATGCACCGCTGACCGTCGACTATGACTGGACGCTGA‑CCATCTAAAAGGCCATTGGGGCAGCATTGCAGCCCCAATGGATATTTGATCGGCCGCCAGATCATCAGGTAg > 2:141217/1‑150 (MQ=255) gcAACGCTCGCCTGCCGCGTCAGCCACGCTTCTCCCAGCATGCACCGCTGATCGTCGACTATGACTGGACGCTGA‑CCATCTAAAAGGCCATTGGGGCTGCATTGCAGCCCCAATGGTTATTTGATCGGCCGCCAGATCATCGGGTAGCGa < 1:464993/150‑1 (MQ=255) aaCGCTCGCCTGCCGCGTCAGCCACGCTTCTCCCAGCATGCACCGCTGATCGTCGACTATGACTGGACGCTGA‑CCATCTAAAAGGCCATTGGGGCTGCATTGCAGCCCCAATGGTTAt > 1:1302538/1‑118 (MQ=255) aaCGCTCGCCTGCCGCGTCAGCCACGCTTCTCCCAGCATGCACCGCTGATCGTCGACTATGACTGGACGCTGA‑CCATCTAAAAGGCCATTGGGGCTGCATTGCAGCCCCAATGGTTATTTGATCGGCCGCCAGATCATCGGGTAGCGATa > 1:1886210/1‑150 (MQ=255) tCGCCTGCCGCGTCAGCCACGCTTCTCCCAGCATGCACCGCTGATCGTCGACTATGACTGGACGCTGA‑CCATCTAAAAGGCCATTGGGGCTGCATTGCAGCCCCaa > 1:2220052/1‑106 (MQ=255) gCCTGCCGCGTCAGCCACGCTTCTCCCAGCATGCACCGCTGATCGTCGACTATGACTGGACGCTGA‑CCATCTAAAAGGCCATTGGGGCTGCATTGCAGCCCCAATGGTTATTTGATCGGCCGCCAGATCATCGGGTAGCGATAAGGCTTg > 1:1500137/1‑150 (MQ=255) ccTGCCGCGTCAGCCACGCTTCTCCCAGCATGCACCGCTGATCGTCGACTATGACTGGACGCTGA‑CCATCTAAAAGGCCATTGGGGCTGCATTGCAGCCCCAATGGTTATTTGATCGGCCGCCAGATCATCGGGTAGCGATAAGGCTTGc < 2:1564814/150‑1 (MQ=255) cgcgTCAGCCACGCTTCTCCCAGCATGCACCGCTGATCGTCGCCTATGACTGGACGCTGA‑CCATCTAAAAGGCCATTGGGGCTGCATTGCAGCCCCAATGGTTATTTGATCGGCCGCCAGATCATCGGGTAGCGATAAGGCTTGCCCTCa < 1:1144111/150‑1 (MQ=255) gcgTCAGCCACGCTTCTCCCAGCATGCACCGCTGATCGTCGACTATGACTGGACGCTGA‑CCATCTAAAAGGCCATTGGGGCTGCATTGCAGCCCCAATGGTTATTTGATCGGCCGCCAGATCATCGGGTAGCGATAAGGCTTGCCCTCAt < 1:1768801/150‑1 (MQ=255) gTCAGCCACGCTTCTCCCAGCATGCACCGCTGATCGTCGACTATGACTGGACGCTGA‑CCATCTAAAAGGCCATTGGGGCTGCATTGCAGCCCCAATGGTTATTTGATCGGCCGCCAGATCATCGGGTAGCGATAAGGCTTGCCCTCATTc < 2:495874/150‑1 (MQ=255) gCCACGCTTCTCCCAGCATGCACCGCTGATCGTCGACTATGACTGGACGCTGA‑CCATCTAAAAGGCCATTGGGGCTGCATTGCAGCCCCAATGGTTATTTGATCGGCCGCCAGATCATCGGGTAGCGATAAGGCTTGCCCTCATTCGccc > 1:1574884/1‑150 (MQ=255) cACGCTTCTCCCAGCATGCACCGCTGATCGTCGACTATGACTGGACGCTGA‑CCATCTAAAAGGCCATTGGGGCTGCATTGCAGCCCCAATGGTTATTTGATCGGCCGCCAGATCATCGGGTAGCGATAAGGCTTGCCCTCATTCGCCCGc > 2:122179/1‑150 (MQ=255) gCTTCTCCCAGCATGCACCGCTGATCGACGACTATGACTGGACGCTGA‑CCATCTAAAAGGCCATTGGGGGTGCAGTGCAGCCCCAATGGTTATTTAATCGGCCGCCAGATCATCGGGTAGCGATAAGGGTTGCACTCATTCGCCCGCaac > 2:189677/1‑148 (MQ=255) cTTCTCCCAGCATGCACCGCTGATCGTCGACTATGACTGGACGCTGA‑CACTCTCCAAGGCCCTTGGGCCTGCATTGCAGCCTCAATGCTTATTTGTTCTGCCGCCAGCTAATCGGGTAGCGATAAGAGCTGCCATCATTCCCCCCCAccc > 2:1121995/1‑149 (MQ=255) tcCCAGCATGCACCGCTGATCGTCGACTATGACTGGACGCTGA‑CCATCTAAAAGGCCATTGGGGCTGCATTGCAGCCCCAATGGTTATTTGATCGGCCGCCAGATCATCGGGTAGCGATAAGGCTTGCCCTCATTCGCCCGCACcgccgc > 2:737881/1‑150 (MQ=255) tcCCAGCAGGCAACGCTTATCGTCGACTAGGACTGGTCGCTTA‑CCATCTAAAAGGCCATTGGGGCTGCATTGCAGCCCCAATGGTTATTTGATCGGCCGCCAGATCATCGGGTAGCGATAAGGCTTGCCCTCATTCGCCCGCACcgccgc > 2:1223412/1‑150 (MQ=255) aTGCACCGCTGATCGTCGACTATGACTGGACGCTGA‑CCATCTAAAAGGCCATTGGGGCTGCATTGCAGCCCCAATGGTTATTTGATCGGCCGCCAGATCATCGGGTAGCGATAAGGCTTGCCCTCATTCGccc < 2:1208111/133‑1 (MQ=255) aTGCACCGCTGATCGTCGACTATGACTGGACGCTGA‑CCATCTAAAAGGCCATTGGGGCTGCATTGCAGCCCCAATGGTTATTTGATCGGCCGCCAGATCATCGGGTAGCGATAAGGCTTGCCCTCATTCGccc > 1:1208111/1‑133 (MQ=255) tGCACCGCTGATCGTCGACTATGACTGGACGCTGA‑CCATCTAAAAGGCCATTGGGGCTGCATTGCAGCCCCAATGGTTATTTGATCGGCCGCCAGATCATCGGGTAGCGATAAGGCTTGCCCTCATTCGCCCGCACCGCCGCgatgatgg > 1:1707762/1‑149 (MQ=255) tGCACCGCTGATCGTCGACTATAAATGCA‑AATGATCTATCTAAAAGGCCATTGGGGCTGCATTGCAGCCCCAATGGTTATTTGATCGGCCGCCAGATCATCGGGTAGCGATAAGGCTTGCCCTCATTCGCCCGCACCGCCGCgatgatga < 2:1508404/150‑1 (MQ=255) aCCGCTGATCGTCGACTATGACTGGACGCTGA‑CCATCTAAAAGGCCATTGGGGCTGCATTGCAGCCCCAATGGTTATTTGATCGGCCGCCAGATCATCggg < 1:1313673/101‑1 (MQ=255) aCCGCTGATCGTCGACTATGACTGGACGCTGA‑CCATCTAAAAGGCCATTGGGGCTGCATTGCAGCCCCAATGGTTATTTGATCGGCCGCCAGATCATCggg > 2:1313673/1‑101 (MQ=255) aCCGCTGATCGTCGACTATGACTGGACGCTGA‑CCATCTAAAAGGCCATTGGGGCTGCATTGCAGCCCCAATGGTTATTTGATCGGCCGCCAGATCATCGGGTAGCGATAAGGCTTGCCCTCAt > 2:230383/1‑123 (MQ=255) aCCGCTGATCGTCGACTATGACTGGACGCTGA‑CCATCTAAAAGGCCATTGGGGCTGCATTGCAGCCCCAATGGTTATTTGATCGGCCGCCAGATCATCGGGTAGCGATAAGGCTTGCCCTCAt < 1:230383/123‑1 (MQ=255) aCCGCTGATCGTCGACTATGACTGGACGCTGA‑CCATCTAAAAGGCCATTGGGGCTGCATTGCAGCCCCAATGGTTATTTGATCGGCCGCCAGATCATCGGGTAGCGATAAGGCTTGCCCTCATTCGCCCGCACCGCCGCGATGATGATCa > 1:470306/1‑150 (MQ=255) tcgtcgACTATGACTGGACGCTGA‑CCATCTAAAAGGCCATTGGGGCTGCATTGCAGCCCCAATGGTTATTTGATCGGCCGCCAGATCATCGGGTAGCGATAAGGCTTGCCCTCATTCGCCCGCACCGCCGCGATGATGATCAATatcatc < 1:725855/150‑1 (MQ=255) tcgtcgACTATGACTGGACGCTGA‑CCATCTAAAAGGCCATTGGGGCTGCATTGCAGCCCCAATGGTTATTTGATCGGCCGCCAGATCATCGGGTAGCGATAAGGCTTGCCCTCATTCGCCCGCACCGCCGCGATGATGATCAATatcatc < 1:122179/150‑1 (MQ=255) tcgtcgACTATGACTGGACGCTGA‑CCATCTAAAAGGCCATTGGGGCTGCATTGCAGCCCCAATGGTTATTTGATCGGCCGCCAGATCATCGGGTAGCGATAAGGCTTGCCCTCATTCGCCCGCACCGCCGCGATGATGATCAATatcatc > 2:1426141/1‑150 (MQ=255) cgtcgACTATGACTGGACGCTGA‑CCATCTAAAAGGCCATTGGGGCTGCATTGCAGCCCCAATGGTTATTTGATCGGCCGCCAGATCATCGGGTAGCGATAAGGCTTGCCCTCATTCGCCCGCACCGCCGCGATGATGATCAATAtcatca < 1:489531/150‑1 (MQ=255) ttgACTATGACTGGACGCTGC‑TCATCTAAAAGGCCATTGGGGCTGAATTGCAGCCCCAATGGTTATTTGATCGGCCGCCAGATCATCGGGTAGCGATAAGGCTTGCCCTCATTCGCCCGCACCGCCGCGATGATGATCAATATCATCACt < 2:1707762/148‑1 (MQ=255) tcgACTATGACTGGACGCTGA‑CCATCTAAAAGGCCATTGGGGCTGCATTGCAGCCCCAATGGTTATTTGATCGGCCGCCAGATCATCGGGTAGCGATAAGGCTTg > 2:1945774/1‑105 (MQ=255) tcgACTATGACTGGACGCTGA‑CCATCTAAAAGGCCATTGGGGCTGCATTGCAGCCCCAATGGTTATTTGATCGGCCGCCAGATCATCGGGTAGCGATAAGGCTTg < 1:1945774/105‑1 (MQ=255) cTATGACTGGACGCTGA‑CCATCTAAAAGGCCATTGGGGCTGCATTGCAGCCCCAATGGTTATTTGATCGGCCGCCAGATCATCGGGTTGCGATAAGGCTTGCCCTCATTCGCCCGGATAGCCGCGATGATGATCAATATAATCACTGcgg > 1:216383/1‑148 (MQ=255) aCTGGACGCTGA‑CCATCTAAAAGGCCATTGGGGCTGCATTGCAGCCCCAATGGTTATTTGATCg > 1:712814/1‑64 (MQ=255) gACGCTGA‑CCATCTAAAAGGCCATTGGGGCTGCATTGCAGCCCCAATGGTTATTTGATCGGCCGCCAGATCATCGGGTAGc > 2:747266/1‑81 (MQ=255) gACGCTGA‑CCATCTAAAAGGCCATTGGGGCTGCATTGCAGCCCCAATGGTTATTTGATCGGCCGCCAGATCATCGGGTAGCGATAAGGCTTGCCCTCATTCGCCCGCACCGCCGCGATGATGATCAATATCATCACTGCCACCGTGAGCa > 1:1688325/1‑150 (MQ=255) cGCTGA‑CCATCTAAAAGGCCATTGGGGCTGCATTGCAGCCCCAATGGTTATTTGATCGGCCGCCAGATCATCGGGTAGCGATAAGGCTTGCCCTCATTCGCCCGCACCGCCGCGATGATGATCAATATCATCACTGCCACCGTGAGCATg < 1:1061340/150‑1 (MQ=255) gCTGA‑CCATCTAAAAGGCCATTGGGGCTGCATTGCAGCCCCAATGGTTATTTGATCGGCCGCCAGATCATCGGGTAGc < 2:2351765/78‑1 (MQ=255) gCTGA‑CCATCTAAAAGGCCATTGGGGCTGCATTGCAGCCCCAATGGTTATTTGATCGGCCGCCAGATCATCGGGTAGCGATaa < 2:1125391/83‑1 (MQ=255) gCTGA‑CCATCTAAAAGGCCATTGGGGCTGCATTGCAGCCCCAATGGTTATTTGATCGGCCGCCAGATCATCGGGTAGCGATaa > 1:1125391/1‑83 (MQ=255) gCTGA‑CCATCTAAAAGGCCATTGGGGCTGCATTGCAGCCCCAATGGTTATTTGATCGGCCGCCAGATCATCGGGTAGCGATAAGGCTTGCCCTCATTCGCCCGCACCGCCGCGATGATGATCAATatcat > 1:113137/1‑130 (MQ=255) gCTGA‑CCATCTAAAAGGCCATTGGGGCTGCATTGCAGCCCCAATGGTTATTTGATCGGCCGCCAGATCATCGGGTAGCGATAAGGCTTGCCCTCATTCGCCCGCACCGCCGCGATGATGATCAATATCATCACTGCCACCGTGAGCATgg < 1:1337656/150‑1 (MQ=255) gCTGA‑CCATCTAAAAGGCCATTGGGGCTGCATTGCAGCCCCAATGGTTATTTAATCGGCCGCCAGATCATCGGGTAGc > 1:2351765/1‑78 (MQ=255) tGA‑CCATCTAAAAGGCCATTGGGGCTGCATTGCAGCCCCAATGGTTATTTGATCGGCCGCCAGATCATCGGGTAGCGATAAGGCTTGCCCTCATTCGCCCGCACCGCCGCGATGATGATCaa > 1:106511/1‑122 (MQ=255) tGA‑CCATCTAAAAGGCCATTGGGGCTGCATTGCAGCCCCAATGGTTATTTGATCGGCCGCCAGATCATCGGGTAGCGATAAGGCTTGCCCTCATTCGCCCGCACCGCCGCGATGATGATCaa < 2:106511/122‑1 (MQ=255) a‑CCATCTAAAAGGCCATTGGGGCTGCATTGCAGCCCCAATGGTTATTTGATCGGCCGCCAGATCATCGGGTAGCGATAAGGCTTGCCCTCATTCGCCCGCACCGCCGCGATGATGATCAATATCATCACTGCCACCGTGAGCATGGCaaa < 1:755450/150‑1 (MQ=255) ccATCTAAAAGGCCATTGGGGCTGCATTGCAGCCCCAATGGTTATTTGATCGGCCGCCAGATCATCGGGTAGCGATAAGGCTTGCCCTCATTCGCCCGCACCGCCGCGATGATGATCAATATCATCACTGCCACCGTGAGCATGGCAAAc < 2:1574884/150‑1 (MQ=255) cATCTAAAAGGCCATTGGGGCTGCATTGCAGCCCCAATGGTTATTTGATCGGCCGCCAGATCATCGGGTAGCGATAAGGCTTGCCCTCATTCGCCCGCACCGCCGCGATGATGATCAATATCATCACTGCCACCGTGAGCATgctgggag < 2:115268/150‑8 (MQ=255) tCTAAAAGGCCATTGGGGCTGCATTGCAGCCCCAATGGTTATTTGATCGGCCGCCAGATCATCGGGTAGCGATAAGGCTTGCCCTCATTCGCCCGCACCGCCGCGATGATGATCAATATCATCACTGCCACCGTGAGCATGGCAAACAGc < 2:398911/150‑1 (MQ=255) ataaccATTGGGGCTGCAATGCAGCCCCAATGGTTATTTGATCGGCCGCCAGATCATCGGGTAGCGATAAGGCTTGCCCTCATTCGCCCGCACCGCCGCGATGATGATCAATATCATCACTGCCACCGTGAGCATGGCAAACAGCACCAg > 1:454532/5‑150 (MQ=255) ggCCATTGGGGCTGCATTGCAGCCCCAATGGTTATTTGATCGGCCGCCAGATCATCGGGTAGCGATAAGGCTTGCCCTCATTCGCCCGCACCGCCGCGATGATGATCAATATCATCACTGCCACCGTGAGCATgg < 1:2153725/135‑1 (MQ=255) ggCCATTGGGGCTGCATTGCAGCCCCAATGGTTATTTGATCGGCCGCCAGATCATCGGGTAGCGATAAGGCTTGCCCTCATTCGCCCGCACCGCCGCGATGATGATCAATATCATCACTGCCACCGTGAGCATgg > 2:2153725/1‑135 (MQ=255) cATTGGGGCTGCATTGCAGCCCCAATGGTTTTTTGCTCGGCCGCCAGATCATCGGGTAGCGATAAGGCTTGCCCTCATTCGCCCGCACCGCCGCGATGATGATCAATATCATCACTGCCACCGTGAGCATGGCAAACAGCACCAGCCCGa < 1:141217/150‑1 (MQ=255) cATTGGGGCTGCAATGCAGCCCCAATGGTTATTTGATCGGCCGCCAGATCATCGGGTAGCGATAAGGCTTGCCCTCATTCGCCCTCACCGCCGCGATGATAATCAATATCATCACTGCCACCGTGAGCATGGCAAACAGCACCAGCCCGa > 1:2111391/1‑150 (MQ=255) aTTGGGGCTGCATTGCAGCCCCAATGGTTATTTGATCGGCCGCCAGATCATCGGGTAGCGATAAGGCTTGCCCTCATTCGCCCGCACCGCCGCGATGATGATCAATATCATCACTGCCACCGTGAGCATGGCAAACAGCACCAGCCCGAt > 2:476445/1‑150 (MQ=255) aTTGGGGCTGCATTGCAGCCCCAATGGTTATTTGATCGGCCGCCAGATCATCGGGTAGCGATAAGGCTTGCCCTCATTCGCCCGCACCGCCGCGATGATGATCAATATCATCACTGCCACCGTGAGCATGGCAAACAGCACCAGCCCGAt > 2:1209700/1‑150 (MQ=255) aTTGGGGCTGCATTGCAGCCCCAATGGTTATTTGATCGGCCGCCAGATCATCGGGTAGCGATAAGGCTTGCCCTCATTCGCCCGCACCGCCGCGATGATGATCAATATCATCACTGCCACCGTGAGCATGGCAAACAGCACCAGCCCGAt > 2:1755856/1‑150 (MQ=255) aTTGGGGCTGCATTGCAGCCCCAATGGTTATTTGATCGGCCGCCAGATCATCGGGTAGCGATAAGGCTTGCCCTCATTCGCCCGCACCGCCGCGATGATGATCAATATCATCACTGCCACCCTGAGCATGGCCAACCGCACCAcccccac > 2:4402/1‑147 (MQ=255) ttGGGGCTGCATTGCAGCCCCAATGGTTATTTGATCGGCCGCCAGATCATCGGGTAGCGATAAGGCTTGCCCTCATTCGCCCGCACCGCCGCGATGATGATCAATATCATCACTGCCACCGTGAGCATGGCAAACAGCCCCAGCCCGATa > 1:835708/1‑150 (MQ=255) ttGGGGCTGCAATGCAGCCCCAATGGTTATTTGATCGGCCGCCAGATCATCGGGTAGCGATAAGGCTTGCCCTCATTCGCCCGCACCGCCGCGATGATGATCAATATCATCACTGCCACCGTGAGCATGGCAAACAGCACCAGCCCGATa > 1:1512478/1‑150 (MQ=255) ggggCTGCATTGCAGCCCCAATGGTTATTTGATCGGCGTCCAGATCATCGGGTAGCGATAAGGCTTGCCCTCATTCGCCCGCACCGCCGCGATGATGATCAATATCATCACTGCCACCGTGAGCATGGCAAACAGCACCAGCCCGATaaa < 1:737881/150‑1 (MQ=255) ggggCTGCATTGCAGCCCCAATGGTTATTTGATCGGCCGCCAGATCATCGGGTAGCGATAAGGCTTGCCCTCATTCGCCCGCACCGCCGCGATGATGATCAATATCATCACTGCCACCGTGAGCATGGCAAACAGCACCAGCCCGATaaa < 2:470306/150‑1 (MQ=255) gggCTGCATTGCAGCCCCAATGGTTATTTGATCGGCCGCCAGATCATCGGGTAGCGATAAGGCTTGCCCTCATTCGCCCGCACCGCCGCGATGATGATCAATATCATCACTGCCACCGTGAGCATGGCAAACAGCACCAGCCCGATAAac > 2:1824059/1‑150 (MQ=255) ggCTGCATTGCAGCCCCAATGGTTATTTGATCGGCCGCCAGATCATCGGGTAGCGATAAGGCTTGCCCTCATTCGCCCGCACCGCCGCGATGATGATCAATATCATCACTGCCACCGTGAGCATGGCAAACAGCACCAGCCCGATAAaca < 1:1223412/150‑1 (MQ=255) gCTGCATTGCAGCCCCAATGGTTATTTGATCGGCCGCCAGATCATCGGGTAGCGATAAGGCTTGCCCTc < 2:114096/69‑1 (MQ=255) tGCATTGCAGCCCCAATGGTTATTTGATCGGCCGCCAGATCATCGGGTAGCGATAAGGCTTGCCCTCATTCGCCCGCACCGCCGCGATGATGATCAATATCATCACTGCCACCGTGAGCAt > 1:981890/1‑121 (MQ=255) tGCATTGCAGCCCCAATGGTTATTTGATCGGCCGCCAGATCATCGGGTAGCGATAAGGCTTGCCCTCATTCGCCCGCACCGCCGCGATGATGATCAATATCATCACTGCCACCGTGAGCATGGCAAACAGCACCAGCCCGATAAACACGa < 1:1470806/150‑1 (MQ=255) gCATTGCAGCCCCAATGGTTATTTGATCGGCCGCCAGATCATCGGGTAGCGATAAGGCTTGCCCTCATTCGCCCGCACCGCCGCGATGATGATCAATATCATCACTGCCACCGTGAGCATGGCAAACAGCACCAGCCCGATAAACACGaa < 2:2057003/150‑1 (MQ=255) | TCGGTTCGACTACCAGATCCTCACCCCGGGCCTGCGCCGCTTCGTGCGCAACGCTCGCCTGCCGCGTCAGCCACGCTTCTCCCAGCATGCACCGCTGATCGTCGACTATGACTGGACGCTGA‑CCATCTAAAAGGCCATTGGGGCTGCATTGCAGCCCCAATGGTTATTTGATCGGCCGCCAGATCATCGGGTAGCGATAAGGCTTGCCCTCATTCGCCCGCACCGCCGCGATGATGATCAATATCATCACTGCCACCGTGAGCATGGCAAACAGCACCAGCCCGATAAACACGAAC > NC_002947/6040702‑6040997 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |