| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 6,049,499 | A→T | 7.6% | K102M (AAG→ATG) ‡ | spoT → | bifunctional (p)ppGpp synthase/hydrolase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 6,049,499 | 0 | A | T | 7.6% | 376.3 / 16.5 | 118 | K102M (AAG→ATG) ‡ | spoT | bifunctional (p)ppGpp synthase/hydrolase |
| Reads supporting (aligned to +/- strand): ref base A (49/60); new base T (5/4); total (54/64) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.30e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.78e-01 | |||||||||||
Only 100 of 119 total aligned reads displayed.
CCAGCATCCTCGCCGACATGCACATGGACCATCAGAGCCTGATGGCGGCCATGCTGCACGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCGAGACCAAGGCCGAGGCGCAGGCGGAAAACTTCCAGAAGATGGCCATGGCCATGGCCCGCGATATCCGCGTGATCCTGGTCAAGCTGGCCGACCGCCTGCACAACATGCGCACCCTGGAAGTGCTGTCTG > NC_002947/6049352‑6049648 | ccAGCATCCTCGCCGACATGCACATGGACCATCAGAGCCTGATGGCGGCCATGCTGCACGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGc < 2:1305430/150‑1 (MQ=255) cAGCATCCTCGCCGACATGCACATGGACCATCAGAGCCTGATGGCGGCCATGCTGCACGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCt > 1:427738/1‑150 (MQ=255) cAGCATCCTCGCCGACATGCACATGGACCATCAGAGCCTGATGGCGGCCATGCTGCACGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCt > 1:114412/1‑150 (MQ=255) cAGCATCCTCGCCGACATGCACATGGACCATCAGAGCCTGATGGCGGCCATGCTGCACGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCACGCAGTTTGGCGAGACCGTGTCCGAATTGGTCGATGGGGTCAGCAAGCt > 1:145767/1‑150 (MQ=255) gCATCCTCGCCGACATGCACATGGACCATCAGAGCCTGATGGCGGCCATGCTGCACGATGTGATCGAAGATACCGGTATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGa < 2:2373503/150‑1 (MQ=255) gCATCCTCGCCGACATGCACATGGACCATCAGAGCCTGATGGCGGCCATGCTGCACGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGa < 1:1522249/150‑1 (MQ=255) aTCCTCGCCGACATGCACATGGACCATCAGAGCCTGATGGCGGCCATGCTGCACGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCTTGCTGAcc < 2:2087017/150‑1 (MQ=255) tCCTCGCCGACATGCACATGGACCATCAGAGCCTGATGGCGGCCATGCTGCACGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCTTGCTGAccc > 1:1583646/1‑150 (MQ=255) tCGCCGACATGCACATGGACCATCAGAGCCTGATGGCGGCCATGCTGCACGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCTTGCTGAccccat > 2:660854/1‑147 (MQ=255) tCGCCGACATGCACATGGACCATCAGAGCCTGATGGCGGCCATGCTGCACGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGa > 1:1694191/1‑150 (MQ=255) tCGCCGACATGCACATGGACCATCAGAGCCTGATGGCGGCCATGCTGCACGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGa < 2:853540/150‑1 (MQ=255) cGCCGACATGCACATGGACCATCAGAGCCTGATGGCGGCCATGCTGCACGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCTTGCTGAccccatc < 1:660854/150‑5 (MQ=255) gACATGCACATGGACCATCAGAGCCTGATGGCGGCCATGCTGCACGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGCCAGCAAGCTGACCCAGATGAAt > 1:1011001/1‑150 (MQ=255) gACATGAACATGGACCATCCGAGCGTGATGGCGCTCACGCTGCACGACGTGATCGAAGTCAGCGGCAACGGCAAGGAAGCCCTCAGGCAGCAGGTTGGCGAGACCGTGGCCGAATTGGTCGCTGAGGTCAGCAAGCGGACCCAGCTGGAt < 2:659059/150‑1 (MQ=255) cATGCACATGGACCATCAGAGCCTGATGGCGGCCATGCTGCACGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAAttt > 1:2313643/1‑150 (MQ=255) aTGCACATGGACCATCAGAGCCTGATGGCGGCCATGCTGCACGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTc < 2:2136020/150‑1 (MQ=255) gCACATGGACCATCAGAGCCTGATGGCGGCCATGCTGCACGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCga < 1:130445/150‑1 (MQ=255) acaTGGACCATCAGAGCCTGATGGCGGCCATGCTGCACGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCgaga < 1:1240095/150‑1 (MQ=255) aTGGACCATCAGAGCCTGATGGCGGCCATGCTGCACGATGTGATCGAAGACATCGGCATCGCCAAGGAAGCCCTCAGCACGAAAATGGGTGAGCGCGGCGCCGTGGGGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCGAGAcc > 1:2090355/1‑150 (MQ=255) ggACCATCAGAGCCTGATGGCGGCCATGCTGCACGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATTGGGTCAGCAAGCTGACCCAGATGAATTTCGAGACCaa > 1:267268/1‑150 (MQ=255) ggACCATCAGAGCCTGATGGCGGCCATGCTGCACGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCGAGACCaa < 2:1949505/150‑1 (MQ=255) gACCATCAGAGCCTGATGGCGGCCATGCTGCACGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGCTGGGGCCAGCAAGCTGACCCAGCTGAATTTCGAGACCAAg > 2:1774103/1‑150 (MQ=255) aCCATCAGAGCCTGATGGCGGCCATGCTGCACGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCGAGACCAAgg < 2:2290040/150‑1 (MQ=255) aCCATCAGAGCCTGATGGCGGCCATGCTGCACGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCGAGACCAAgg < 1:702517/150‑1 (MQ=255) aTCAGAGCCTGATGGCGGCCATGCTGCACGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCatc > 2:1262111/1‑127 (MQ=255) aTCAGAGCCTGATGGCGGCCATGCTGCACGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCGAGACCAAGGCCg > 1:91388/1‑150 (MQ=255) aTCAGAGCCTGATGGCGGCCATGCTGCACGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCGAGACCAAGGCCg < 2:2192950/150‑1 (MQ=255) gagCCTGATGGCGGCCATGCTGCACGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCGAGACCAAGGCCGAGgc > 1:1084637/1‑150 (MQ=255) gagCCTGATGGCGGCCATGCTGCACGATGTGATCGAAAACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCGAGACCAAGGCCGAGgc < 1:1785272/150‑1 (MQ=255) ccTGATGGCGGCCATGCTGCACGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCGAGACCAAGGCCGAGGCGCa < 1:1461233/150‑1 (MQ=255) gATGGCGGCCATGCTGCACGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCGAGACCAAGGCCGAGGCGCAGGc > 1:374243/1‑150 (MQ=255) gcggcCATGCTGCACGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCGAGACCAAGGCCGAGGCGCAGGCGGaa > 2:1562529/1‑150 (MQ=255) gcCATGCTGCACGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCGAGACCAAGGCCGAGGCGCAGGCGGAAAAc < 2:1694191/150‑1 (MQ=255) cATGCTGCACGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCgaga < 1:1280377/122‑1 (MQ=255) cATGCTGCACGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCgaga > 2:1280377/1‑122 (MQ=255) cATGCTGCACGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCGAGACCAAgg > 1:972066/1‑128 (MQ=255) cATGCTGCACGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCGAGACCAAGGCCGAGGCGCCGCCggctagaac > 2:1118380/1‑143 (MQ=255) aTGCTGCACGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCGAGACCAAGGCCGAGGCGCAGGCGGAAAACTTc > 1:1737569/1‑150 (MQ=255) aTGCTGCACGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCAGGATGAATTTCGAGACCAAGGCCGAGGCGCAGGCGGAAAACTTc < 2:417023/150‑1 (MQ=255) tgctgcACGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCGAGACCAAGGCCGAGGCGCAGGCGGAAAACTTcc < 1:502109/150‑1 (MQ=255) tgctgcACGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCGAGACCAAGGCCGAGGCGCAGGCGGAAAACTTcc < 2:2266951/150‑1 (MQ=255) ggtgcATGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCATCAGCCAGGAGTTTGGCGAGACCGTGGCCGACTTGGTCGATGGGGTCAGCAAGCTGACCCAGATGACTTTGGAGACCAAGGCCGAGGCGCAGGCGGAAAACTTCCa < 2:1011001/148‑1 (MQ=255) gcACGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCGAGACCAAGGCCGAGGCGCAGGCGGAAAACTTCCagaa > 1:192404/1‑150 (MQ=255) gcACGATGTGATCGAAGACACAGGCATCGCCAAGGAAGAACTCAGCCAGGAGGTTGGCGAGACCGTGGCCGAATGGGTCGATTGGGTCAGCAAGCTGACCCAGATGAATTTCGAGACCAAGGCCGAGGCGCAGGCGGAAAACTTCCagaa < 2:267268/150‑1 (MQ=255) aCGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCGAGACCAAGGCCGAGGCGCAGGCGGAAAACTTCCagaaga < 1:603702/150‑1 (MQ=255) aTGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCGAGACCAAGGCCGAGGCGCAGGCGGAAAACTTCCAGAAGatgg < 2:1737569/150‑1 (MQ=255) tgtgATCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCGAGACCAAGGCCGAGGCGCAGGCGGAAAACTTCCAGAAGatggc < 2:192404/150‑1 (MQ=255) tgtgATCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCGAGACCAAGGCCGAGGCGCAGGCGGAAAACTTCCAGAAGatggc > 1:2166127/1‑150 (MQ=255) tCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCGAGACCAAGGCCGAGGCGCAGGCGGAAAACTTCCAGAAGatggccatgg > 1:1831967/1‑150 (MQ=255) aaGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCGAGACCAAGGCCGAGGCGCAGGCGGAAAACTTCCAGAAGatggccatggcca > 1:2268150/1‑150 (MQ=255) ccacCGGCATCGCAAAGGCAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCGAGACCAAGGCCGAGGCGCAGGCGGAAAACTTCCAGAAGatggccatggccatgg > 2:2331868/2‑150 (MQ=255) acacCGTCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCGAGACCAAGGCCGAGGCGCAGGCGGAAAACTTCCAGAAGatggccatggccatgg < 2:374243/150‑1 (MQ=255) acacCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCGAGACCAAGGCCGAGGCGCAGGCGGAAAACTTCCAGAAGatggccatggccatgg < 2:1084637/150‑1 (MQ=255) acacCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCGAGACCAAGGCCGAGGCGCAGGCGGAAAACTTCCAGAAGatggccatggccatgg < 1:2353831/150‑1 (MQ=255) cacCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCGAGACCAAGGCCGAGGCGCAGGCGGAAAACTTCCAGAAGatggccatggccatggc < 2:2313643/150‑1 (MQ=255) acCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCGAGACCAAGGCCGAGGCGCAGGCGGAAAACTTCCAGAAGatggccatggccatggcc > 1:585387/1‑150 (MQ=255) cGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCGAGACCAAGGCCGAGGCGCAGGCGGAAAACTTCCAGAAGATGGCCATGGCCATGGCCcg > 2:1840732/1‑150 (MQ=255) ggCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCGAGACCAAGGCCGAGGCGCAGGCGGAAAACTTCCAGAAGatggccatggccatggccatc < 2:91388/150‑4 (MQ=255) cATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCGAGACCAAGGCCGAGGCGCAGGCGGAAAACTTc > 2:1625732/1‑121 (MQ=255) cATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCGAGACCAAGGCCGAGGCGCAGGCGGAAAACTTCCAGAAGatggccatggccatggccatctt < 1:1774103/150‑6 (MQ=255) aTCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCGAGAc > 1:693862/1‑92 (MQ=255) aTCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCGAGAc < 2:693862/92‑1 (MQ=255) cAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCGAGAc > 2:2043535/1‑87 (MQ=255) cAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCGAGAc < 1:2043535/87‑1 (MQ=255) cAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCGAGACCAAGGCCGAGGCGCAGGCGGAAAACTTCCAGAAGATGGCCATGGCCATGGCCCGCGATATCcg > 2:94861/1‑150 (MQ=255) aaGGAAGCCCTCAGCCAGCAGATTGGCGAGAAGTTGCTGGAAATGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCGAGACCAAGGCCGAGGCGCAGGCGGAAAACTTCCAGAAGATGGCCATGGCCATGGCCCGCGATATCcgc < 2:1831967/150‑1 (MQ=255) gCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCGAGACCAAGGCCGAGGCGCAGGCGGAAAACt < 2:820004/106‑1 (MQ=255) gCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCGAGACCAAGGCCGAGGCGCAGGCGGAAAACt > 1:820004/1‑106 (MQ=255) gCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCGAGACCAAGGCCGAGGCGCAGGCGGAAAACTTCCAGAAGATGGCCATGGCCATGGCCCGCGATATCCGCGTGATc < 1:1562529/150‑1 (MQ=255) gCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCGAGACCAAGGCCGAGGCGCAGGCGGAAAACTTCCAGAAGATGGCCATGGCCATGGCCCGCGATATCCGCGTGATc < 2:2090355/150‑1 (MQ=255) ccTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCGAGACCAAGGCCGAGGCGCAGGCGGAAAACTTCCAGAAGatgg < 1:1261703/116‑1 (MQ=255) cTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCGAGACCAAGGCCGAGGCGCAGGCGGAAAACTTCCAGAAGATGGCCATGGCCATGGCCCGCGATATCCGCGTGATCCTg < 1:849477/150‑1 (MQ=255) cTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCGAGACCAAGGCCGAGGCGCAGGCGGAAAACTTCCAGAAGATGGCCATGGCCATGGCCCGCGATATCCGCGTGATCCTg < 1:306029/150‑1 (MQ=255) cTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCGAGACCAAGGCCGAGGCGCAGGCGGAAAACTTCCAGAAGATGGCCATGGCCATGGCCCGCGATATCCGCGTGATCCTg > 2:849477/1‑150 (MQ=255) cTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGACGATGGGATCAGCAAGCTGACCCAGATGAATTTCGAGACCATAATAGTGCCGACTGCTTAAAAGTTCCAGAAGATGGGCATGGCCATGGCCCGCGGTATCCGCGTGAGCCTg > 1:549395/1‑150 (MQ=255) tCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTTGAGACCAAGGCCGAGGAGCAGGCGGAAAACTTCCAGAAGATGGCCATGGCCATGGCCCGCGATATCCGCGTGATCCTgg < 2:145767/150‑1 (MQ=255) tCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCGAGACCAAGGCCGAGGCGCAGGCGGAAAACTTCCAGAAGATGGCCATGGCCATGGCCCGCGATATCCGCGTGATCCTgg > 2:1376016/1‑150 (MQ=255) tCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCGAGACCAAGGCCGAGGCGCAGGCGGAAAACTTCCAGAAGATGGCCATGGCCATGGCCCGCGATATCCGCGTGATCCTgg < 2:114706/150‑1 (MQ=255) tCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCGAGACCAAGGCCGAGGCGCAGGCGGAAAACTTCCAGAAGATGGCCATGGCCATGGCCCGCGATATCCGCGTGATCCTgg < 2:114412/150‑1 (MQ=255) tCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCGAGACCAAGGCCGAGGCGCAGGCGGAAAACTTCCAGAAGATGGCCATGGCCATGGCCCGCGATATCCGCGTGATCCTgg < 1:1103720/150‑1 (MQ=255) agccagcAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCGAGACCAAGGCCGAGGCGCAGGCGGAAAACTTCCAGAAGATGGCCATGGCCATGGCCCGCGATATCCGCGTGATCCTGGTc > 2:971896/1‑150 (MQ=255) cagcagTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCGAGACCAAGGCCGAGGCGCAGGCGGAAAACTTCCAGAAGATGGCCATGGCCATGGCCCGCGATATCCGCGt > 2:2119142/1‑137 (MQ=255) cagcagTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCGAGACCAAGGCCGAGGCGCAGGCGGAAAACTTCCAGAAGATGGCCATGGCCATGGCCCGCGATATCCGCGTGATCCTGGTCAAg > 1:1310416/1‑150 (MQ=255) agTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCCACACCAAGGCCGAGGGGCAGGCGGAAAACTTCCAGCAGCTGGCCCTGGCCATGGCCCGCGATATCCGCGTGATCCTGGTCAAGCTgg < 1:1376016/150‑1 (MQ=255) tttGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCGAGACCAAGGCCGAGGCGCAGGCGGAAAACTTCCAGAAGatggccatggccatggc > 1:36846/1‑116 (MQ=255) tttGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCGAGACCAAGGCCGAGGCGCAGGCGGAAAACTTCCAGAAGatggccatggccatggc < 2:36846/116‑1 (MQ=255) ggCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCGAGACCAAGGCCGAGGCGCAGGCGGAAAACTTCCAGAAGATGGCCATGGCCATGGCCCGCGATATCCGCGTGATCCTGGTCAAGCTGGCCGAc < 1:971896/150‑1 (MQ=255) gagaCCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCGAGACCAAGGCCGAGGCGCAGGCGGAAAACTTCCAGAAGATGGCCATGGCCATGGCCCGCGATATCCGCGTGATCCTGGTCAAGCTGGCCGACCGc > 2:1923909/1‑150 (MQ=255) cGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCGAGACCAAGGCCGAGGCGCAGGCGGAAAACTTCCAGAAGatggccatgg > 1:2344437/1‑98 (MQ=255) gTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCGAGACCAAGGCCGAGGCGCAGGCGGAAAACTTCCAGAAGATGGCCATGGCCATGGCCCGCGATATCCGCGTGATCCTGGTCAAGCTGGCCGACCGCCTGcac > 1:1809546/1‑150 (MQ=255) ggCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCGAGACCAAGGCCGAGGCGCAGGCGGAAAACTTCCAGAAGatggccatggccatg < 1:1938269/100‑1 (MQ=255) cGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCGAGACCAAGGCCGAGGCGCAGTCGGAAAACTTCCAGAAGATGGCCATGGCCATGGCCCGCGATATCCGCGTGATCCTGGTCAAGGTGGCCGACCGCCTGCACAACAt > 1:508503/1‑150 (MQ=255) ttGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCGAGACCAAGGCCGAGGCGCAGGCGGAAAACTTcc > 2:1900572/1‑73 (MQ=255) gTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCGAGACCAAGGCCGAGGCGCAGGCGGAAAACTTCCAGAAGatggccatggccatggccatc > 1:76738/1‑93 (MQ=255) gTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCGAGACCAAGGCCGAGGCGCAGGCGGAAAACTTCCAGAAGatggccatggccatggccatc < 2:76738/96‑4 (MQ=255) tCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCGAGACCAAGGCCGAGGCGCAGGCGGAAAACTTCCAGAAGATGGCCATGGCCATGGCCCGCGATATCCGCGTGATCCTGGCCAAGCTGGCCGACCGCCTGCACAACATGCGCAccc < 1:94861/150‑1 (MQ=255) tctgggTCAGCTTGCTGACCGCGATGAATTTCGAGACCAAGGCCGAGGCGCAGGCGGAAAACTTTCAGAAGATGGCCATGGCCATGGCCCGCGATATCCGCGTGATCCTGGTCAAGCTGGCAGCCCGCCTGCACCACATGCGCACCCTgg > 2:171602/4‑150 (MQ=255) ggTCAGCTTGCTGACCCAGATGAATTTCGAGACCAAGGCCGAGGCGCAGGCGGAAAACTTCCAGAAGATGGCCATGGCCATGGCCCGCGATATCCACATGATCCTGGTCAAGCTGGCCGACCGCCTGCACAACATGCGCACCCTGGAAGt > 1:1366110/1‑150 (MQ=255) gCAAGCTGACCCAGATGAATTTCGAGACCAAGGCCGAGGCGCAGGCGGAAAACTTCCAGAAGATGGCCATGGCCATGGCCCGCGATATCCGCGTGATCCTGGTCAAGCTGGCCGACCGCCTGCACAACATGCGCACCCTGGAAGTGCTGt > 1:558657/1‑150 (MQ=255) aGCTGACCCAGATGAATTTCGAGACCAAGGCCGACGCCCCGGCGGAAAACTTCCAGAAGATGGCCATGGCCATGGCCCGCGATATCCGCGTGATCCTGGTCAAGCTGGCCGACCGCCTGCACAACATGCGCACCCTGGAAGTGCTGTCTg < 1:1933765/150‑1 (MQ=255) | CCAGCATCCTCGCCGACATGCACATGGACCATCAGAGCCTGATGGCGGCCATGCTGCACGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCGAGACCAAGGCCGAGGCGCAGGCGGAAAACTTCCAGAAGATGGCCATGGCCATGGCCCGCGATATCCGCGTGATCCTGGTCAAGCTGGCCGACCGCCTGCACAACATGCGCACCCTGGAAGTGCTGTCTG > NC_002947/6049352‑6049648 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |