| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 6,050,960 | G→A | 5.7% | G589D (GGC→GAC) | spoT → | bifunctional (p)ppGpp synthase/hydrolase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 6,050,960 | 0 | G | A | 5.7% | 206.1 / 2.5 | 70 | G589D (GGC→GAC) | spoT | bifunctional (p)ppGpp synthase/hydrolase |
| Reads supporting (aligned to +/- strand): ref base G (30/36); new base A (2/2); total (32/38) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.46e-01 | |||||||||||
GCGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCAGAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGATTGTCGGCC‑ACCTGTCGGCCGGCAAGGGCATGGTCGTGCACCTGGAGAACTGCCGCAACATCAGTGAAATCCGCCACAACCCCGAAAAGTGCGTGCAACTCTCCTGGGCCAAGGACATCACTGGCGAGTTCAATGTCGAACTGCGTGTCGAACTGGAACACCAGCGCGGGC > NC_002947/6050814‑6051109 | gcgcCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCAGAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGATTGTCGGCC‑ACCTGTCGGCCGGCaa < 2:1501679/150‑1 (MQ=255) cgccgcCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCAGAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGATTGTCGGCC‑ACCTGTCGGCCGGCAAg < 2:715939/150‑1 (MQ=255) gccgccTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCAGAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGATTGTCGGCC‑ACCTGTCGGCCGGCAAgg > 1:1103183/1‑150 (MQ=255) cgccTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCAGAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGATTGTCGGCC‑ACCTGTCGGCCGGCAAGGGc < 2:1103183/150‑1 (MQ=255) ctgctgTCGGCCGAAGGCGAACAGCTGCCGGCGCCAGAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGATTGTCGGCC‑ACCTGTCGGCCGGCAAGGGCATg < 1:214841/150‑1 (MQ=255) ctgTCGGCCGAAGGCGAACAGCTGCCGGCGCCAGAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGATTGTCGGCC‑ACCTGTCGGCCGGCAAGGGCATGGTc < 2:1878958/150‑1 (MQ=255) tgTCGGCCGAAGGCGAACAGCTGCCGGCGCCAGAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGATTGTCGGCC‑ACCTGTCGGCCGGCAAGGGCATGGTCg > 1:406990/1‑150 (MQ=255) tCGGCCGAAGGCGAACAGCTGCCGGCGCCAGAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGATTGTCGGCC‑ACCTGTCGGCCGGCaa < 1:441476/137‑1 (MQ=255) tCGGCCGAAGGCGAACAGCTGCCGGCGCCAGAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGATTGTCGGCC‑ACCTGTCGGCCGGCaa > 2:441476/1‑137 (MQ=255) cGAAGGCGAACAGCTGCCGGCGCCAGAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGATTGTCGGCC‑ACCTGTCGGCCGGCAAGGGCATGGTCGTGCACCt < 1:1124764/150‑1 (MQ=255) gCGAACAGCTGCCGGCGCCAGAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCCGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGATTGTCGGCC‑ACCTGTCGGCCGGCAAGGGCATGGCCGTGCACCtccaga > 2:344805/1‑145 (MQ=255) aCAGCTGCCGGCGCCAGAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGATTGTCGGCC‑ACCTGTCGGCCGGCAAGGGCATGGTCGTGCACCTGGAGAACTg > 2:2227096/1‑150 (MQ=255) gCCGGCGCCAGAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGATTGTCGGCC‑ACCTGTCGGCCGGCAAGGGCATGGTCGTGCACCTGGAGAACTGCCGCaa < 1:236976/150‑1 (MQ=255) cgcCAGAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGATTGTCGGCC‑ACCTGTCGGCCGGCAAGGGCATGGTCGTGCACCTGGAGAACTGCCGCAACATCa < 1:39050/150‑1 (MQ=255) cgcCAGAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCAAGCCCAAGCCTCAGGACCCGATTCAGGTCC‑TCCTGTCGTCCGGCAAGGGCATGGTCGTGCACCTGGAGAACTGCCGCAACATCa < 1:1498344/150‑1 (MQ=255) ccAGAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGATTGTCGGCC‑ACCTGTCGGCCGGCAAGGGCATGGTCGTGCACCTGGAGAACTGCCGCAACATCAGt < 1:2227096/150‑1 (MQ=255) ccAGAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGATTGTCGGCC‑ACCTGTCGGCCGGCAAGGGCATGGTCGTGCACCTGGAGAACTGCCGCAACATCAGt < 1:344805/150‑1 (MQ=255) ccAGAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGATTGTCGGCC‑ACCTGTCGGCCGGCAAGGGCATGGTCGTGCACCTGGAGAACTGCCGCAACATCAGt > 2:1848064/1‑150 (MQ=255) cAGAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGATTGTCGGCC‑ACCTGTCGGCCGGCAAGGGCATGGTCGTGCACCTGgaga > 1:827379/1‑132 (MQ=255) cAGAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGATTGTCGGCC‑ACCTGTCGGCCGGCAAGGGCATGGTCGTGCACCTGgaga < 2:827379/132‑1 (MQ=255) gAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGATTGTCGGCC‑ACCTGTCGGCCGGCAAGGGCATGGTCGTGCACCTGGAGAACTGCCGCAACATCAGTGaa > 2:556521/1‑150 (MQ=255) gAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGATTGTCGGCC‑ACCTGTCGGCCGGCAAGGGCATGGTCGTGCACCTGGAGAACTGCCGCAACATCAGTGaa < 2:381890/150‑1 (MQ=255) aaGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGATTGTCGGCC‑ACCTGTCGGCCGGCAAGGGCATGGTCGTGCACCTGGAGAACTGCCGCAACATCAGTGaaa < 2:1781617/150‑1 (MQ=255) gCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGATTGTCGGCC‑ACCTGTCGGCCGGCAAGGGCATGGTCGTGCACCTGGAGAACTGCCGCAACATCAGTGAAATCCGCCACAAc > 2:1910701/1‑150 (MQ=255) gATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGATTGTCGGCC‑ACCTGTCGGCCGGCAAGGGCATGGTCGTGCACCTGGAGAACTGCCGCAACATCAGTGAAATCCGCCACAAccc < 2:1632081/150‑1 (MQ=255) gCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGATTGTCGGCC‑ACCTGTCGGCCGGCAAGGGCATGGTCGTGCACCTGGAGAACTGCCGCAACATCAGTGAAATCCGCCACAACCCCGAAAAgt < 2:1161380/150‑1 (MQ=255) cACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGATTGTCGGCC‑ACCTGTCGGCCGGCAAGGGCATGGTCGTGCACCTGGAGAACTGCCGCAACATCAGTGAAATCCGCCACAACCCCGAAAAgtg > 2:840745/1‑150 (MQ=255) ccGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGATTGTCGGCC‑ACCTGTCGGCCGGCAAGGGCATGGTCGt < 1:1877394/94‑1 (MQ=255) ccGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGATTGTCGGCC‑ACCTGTCGGCCGGCAAGGGCATGGTCGt > 2:1877394/1‑94 (MQ=255) cGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGATTGTCGGCC‑ACCTGTCGGCCGGCAAGGGCATGGTCGTGCACCTGGAGAACTGCCGc < 1:2058474/112‑1 (MQ=255) cGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGATTGTCGGCC‑ACCTGTCGGCCGGCAAGGGCATGGTCGTGCACCTGGAGAACTGCCGc > 2:2058474/1‑112 (MQ=255) aaGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGATTGTCGGCC‑ACCTGTCGGCCGGCAAGGGCATGGTCGTGCACCTGGAGAACTGCCGCAAc < 1:574519/113‑1 (MQ=255) aaGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGATTGTCGGCC‑ACCTGTCGGCCGGCAAGGGCATGGTCGTGCACCTGGAGAACTGCCGCAAc > 2:574519/1‑113 (MQ=255) aaGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGATTGTCGGCC‑ACCTGTCGGCCGGCAAGGGCATGGTCGTGCACCTGGAGAACTGCCGCAACATCAGTGAAATCCGCCACAACCCCGAAAAgtgcgtgc > 1:2078212/1‑150 (MQ=255) gCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGATTGTCGGCC‑ACCTGTCGGCCGGCAAGGGCATGGTCGTGCACCTGGAGAACTGCCGCAACATCAGTGAAATCCGCCACAACCCCGCAACGTGCGTGCacc > 2:1532965/1‑148 (MQ=255) cTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGATTGTCGGCC‑ACCTGTCGGCCGGCAAGGGCATGGTCGTGCACCTGGAGAACTGCCGCAACATCAGt > 2:217307/1‑114 (MQ=255) cTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGATTGTCGGCC‑ACCTGTCGGCCGGCAAGGGCATGGTCGTGCACCTGGAGAACTGCCGCAACATCAGt < 1:217307/114‑1 (MQ=255) tCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGATTGTCGGCC‑ACCTGTCGGCCGGCAAGGGCATGGTCGTGCACCTGGAGAACTGCCGCAACATCa < 2:1213893/105‑1 (MQ=255) tCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGATTGTCGGCC‑ACCTGTCGGCCGGCAAGGGCATGGTCGTGCACCTGGAGAACTGCCGCAACATCa > 1:1213893/1‑105 (MQ=255) tCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGATTGTCGGCC‑ACCTGTCGGCCGGCAAGGGCATGGTCGTGCACCTGGAGAACTGCCGCAACATCAGTGAAATCCGCCACAACCCCGAAAAGTGCGTGCAACTCTcc < 2:358670/146‑1 (MQ=255) tCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGATTGTCGGCC‑ACCTGTCGGCCGGCAAGGGCATGGTCGTGCACCTGGAGAACTGCCGCAACATCAGTGAAATCCGCCACAACCCCGAAAAGTGCGTGCAACTCTcc > 1:358670/1‑146 (MQ=255) gCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGATTGTCGGCC‑ACCTGTCGGCCGGCAAGGGCATGGTCGTGCACCTGGAGAACTGCCGCAACATCAGTGAAATCCGc < 2:1606178/113‑1 (MQ=255) gCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGATTGTCGGCC‑ACCTGTCGGCCGGCAAGGGCATGGTCGTGCACCTGGAGAACTGCCGCAACATCAGTGAAATCCGc > 1:1606178/1‑113 (MQ=255) tACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGATTGTCGGCC‑ACCTGTCGGCCGGCAAGGGCATGGTCGTGCACCTGGAGAACTGCCGCAACATCAGTGAAATCCGCCACAACCCCGAAAAGTGCGTGCAACTCTCCTGGGCCAAg < 1:913763/150‑1 (MQ=255) gCCAGGTGCTGCACGCCGATCCCGGGTGACCCGATTGTCGGCC‑ACCTGTCGGCCGGCAAGGGCATGGTCGTGCACCTGGAGAACTGCCGCAACATCAGTGAAATCCGCCACAACCCCGAAAAGTGCGTGCAACTCTCCTGGGCCAAGGAc > 1:2252554/1‑150 (MQ=255) ccAAGTGCTGCACGCCGATCCCGGGTGACCCGATTGTCGGCC‑ACCTGTCGGCCGGCAAGGGCATGGTCGTGCACCTGGAGAACTGCCGCAACATCAGTGAAATCCGCCACAACCCCGAAAAGTGCGTGCAACTCTCCTGGGCCAAGGACa > 1:2012271/1‑150 (MQ=255) tgcACGCCGATCCCGGGTGACCCGATTGTCGGCC‑ACCTGTCGGCCGGCAAGGGCATGGTCGTGCACCTGGAGAACTGCCGCAACATCAGTGAAATCCGCCACAACCCCGAAAAGTGCGTGCAACTCTCCTGGGCCAAGGACATCACTGGc > 1:861736/1‑150 (MQ=255) tgcACGCCGATCCCGGGTGACCCGATTGTCGGCC‑ACCTGTCGGCCGGCAAGGGCATGGTCGTGCACCTGGAGAACTGCCGCAACATCAGTGAAATCCGCCACAACCCCGAAAAGTGCGTGCAACTCTCCTGGGCCAAGGACATCACTGGc > 1:2324456/1‑150 (MQ=255) cACGCCGATCCCGGGTGACCCGATTGTCGGCC‑ACCTGTCGGCCGGCAAGGGCATGGTCGTGCACCTGGAGAACTGCCGCAACATCAGTGAAATCCGCCACAACCCCGAAAAGTGCGTGCAACTCTCCTGGGCCAAGGACATCACTGGCGa < 2:861736/150‑1 (MQ=255) ctccaggtgcacgaccatgcccTTGCCGGCC‑GACAGGTGGCCGACAAGGGCATGGTCGTGCACCTGGAGAACTGCCGCAACATCAGTGAAATCCGc < 1:1738537‑M1/74‑1 (MQ=255) ctccaggtgcacgaccatgcccTTGCCGGCC‑GACAGGTGGCCGACAAGGGCATGGTCGTGCACCTGGAGAACTGCCGCAACATCAGTGAAATCCGc > 2:1738537‑M1/23‑96 (MQ=255) aTCCCGGGTGACCCGATTGTCGGCC‑ACCTGTCGGCCGGCAAGGGCATGGTCGTGCACCTGGAGAACTGCCGCAACATCAGTGAAATCCGCCACAACCCCGAAAAGTGCGTGCAACTCTCCTGGGCCAAGGACATCACTGGCGAGTTCAAt < 2:1437171/150‑1 (MQ=255) aTCCCGGGTGACCCGATTGTCGGCC‑ACCTGTCGGCCGGCAAGGGCATGGTCGTGCACCTGGAGAACTGCCGCAAAATCAGTGAAATCCGCCACAACCCCGAAAAGTGCGTGCAACTCTCCTGCGCCAAGGACATCACTGGCGAGttaact < 2:406990/150‑5 (MQ=255) gaccatgcccTTGCCGGCCGACAGGT‑GGCCGACAAGGGCATGGTCGTGCACCTGGAGAACTGCCGCAACATCAGTGAAATCCGCCACAACCCCGAAAAgtgc < 1:678436‑M1/92‑1 (MQ=255) gaccatgcccTTGCCGGCCGACAGGT‑GGCCGACAAGGGCATGGTCGTGCACCTGGAGAACTGCCGCAACATCAGTGAAATCCGCCACAACCCCGAAAAgtgc > 2:678436‑M1/11‑102 (MQ=255) tGACCCGATTGTCGGCC‑ACCTGTCGGCCGGCAAGGGCATGGTCGTGCACCTGGAGAACTGCCGCAACATCAGTGAAATCCGCCACAACCCCGAAAAGTGCGTGCAACTCTCCTGGGCCAAGGACATCACTGGCGAGTTCAATGTCGAACt < 2:2252554/150‑1 (MQ=255) aCCCGATTGTCGGCC‑ACCTGTCGGCCGGCAAGGGCATGGTCGTGCACCTGGAGAACTGCCGCAACATCAGTGAAATCCGCCACAACCCCGAAAAGTGCGTGCAACTCTCCTGGGCCAAGGACATCACTGGCGAGTTCAATGTCGAACTGc < 1:840745/150‑1 (MQ=255) ccGATTGTCGGCC‑ACCTGTCGGCCGGCAAGGGCATGGTCGTGCACCTGGAGAACTGCCGCAACATCAGt < 1:671843/69‑1 (MQ=255) ccGATTGTCGGCC‑ACCTGTCGGCCGGCAAGGGCATGGTCGTGCACCTGGAGAACTGCCGCAACATCAGt > 2:671843/1‑69 (MQ=255) ccGATTGTCGGCC‑ACCTGTCGGCCGGCAAGGGCATGGTCGTGCACCTGGAGAACTGCCGCAACATCAGTGAAATCCGc > 1:1888364/1‑78 (MQ=255) ccGATTGTCGGCC‑ACCTGTCGGCCGGCAAGGGCATGGTCGTGCACCTGGAGAACTGCCGCAACATCAGTGAAATCCGc < 2:1888364/78‑1 (MQ=255) ccGATTGTCGGCC‑ACCGGTCGGCCGGCAAGGGCATGGTCGTGCACCTGGAGAACTGCCGCAACATCAGTGAAATCCGCCACAACCCCGAAAAGTGCGTGCAACTCTCCTGGGCCAAGGACATCACTGGCGAGTTCAATGTCGAACTGCgt < 2:2242969/150‑1 (MQ=255) GTCGGCC‑ACCTGTCGGCCGGCAAGGGCATGGTCGTGCACCTGGAGAACTGCCGCAACATCAGTGAAATCCGCCACAACCCCGAAAAGTGCGTGCAACTCTCCTGGGCCAAGGACATCACTGGCGAGTTCAATGTCGAACTGCGTGTCGaa > 1:1848064‑M1/1‑150 (MQ=255) ggCC‑ACCTGTCGGCCGGCAAGGGCATGGTCGTGCACCTGGAGAACTGCCGCAACATCAGTGAAATCCGCCACAACCCCGAAAAGTGCGTGCAACTCTCCTGGGCCAAGGACATCACTGGCGAGTTCAATGTCGAACTGCGTGTCGAACTg > 2:2013494/1‑150 (MQ=255) c‑ACCTGTCGGCCGGCAAGGGCATGGTCGTGCACCTGGAGAACTGCCGCAACATCAGTGAAATCCGCCACAACCCCGaaaa < 1:1840540/80‑1 (MQ=255) c‑ACCTGTCGGCCGGCAAGGGCATGGTCGTGCACCTGGAGAACTGCCGCAACATCAGTGAAATCCGCCACAACCCCGaaaa > 2:1840540/1‑80 (MQ=255) aCCTGTCGGCCGGCAAGGGCATGGTCGTGCACCTGGAGAACTGCCGCAACATCAGTGAAATCCGCCACAACCCCGAAAAGTGCGTGCAACTCTCCTGGGCCAAGGACATCACTGGCGAGtt < 2:2303013/121‑1 (MQ=255) aCCTGTCGGCCGGCAAGGGCATGGTCGTGCACCTGGAGAACTGCCGCAACATCAGTGAAATCCGCCACAACCCCGAAAAGTGCGTGCAACTCTCCTAGGCCAAGGACATCACTGGCGAGtt > 1:2303013/1‑121 (MQ=255) gTCGGCCGGCAAGGGCATGGTCGTGCACCTGGAGAACTGCCGCAACATCAGTGAAATCCGCCACAACCCCGAAAAGTGCGTGCAACTCTCCTGGGCCAAGGACATCACTGGCGAGTTCAATGTCGAACTGCGTGTCGAACTGGa < 1:1681543/144‑1 (MQ=255) gTCGGCCGGCAAGGGCATGGTCGTGCACCTGGAGAACTGCCGCAACATCAGTGAAATCCGCCACAACCCCGAAAAGTGCGTGCAACTCTCCTGGGCCAAGGACATCACTGGCGAGTTCAATGTCGAACTGCGTGTCGAACTGGa > 2:1681543/1‑144 (MQ=255) ggcAAGGGCATGGTCGTGCACCTGGAGAACTGCCGCAACATCAGTGAAATCCGCCACAACCCCGAAAAGTGCGTGCAACTCTCCTGGGCCAAGGACATCACTGGCGAGTTCAATGTCGAACTGCGTGTCGAACTGGAACACCAGCGCggg < 2:2078212/150‑1 (MQ=255) gcAAGGGAACAGTCGTGCACCTGGAGAACTGCCGCAACCTCAGTGAAAGCCGCCACAACCCCGAAAAGTGCGTGCAACTCTCCTGGGCCAAGGACATCACTGGCGAGTTCAATGTCGAACTGCGTGTCGAACTGGAACACCAGCGCGGGc < 1:1910701/150‑1 (MQ=255) | GCGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCAGAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGATTGTCGGCC‑ACCTGTCGGCCGGCAAGGGCATGGTCGTGCACCTGGAGAACTGCCGCAACATCAGTGAAATCCGCCACAACCCCGAAAAGTGCGTGCAACTCTCCTGGGCCAAGGACATCACTGGCGAGTTCAATGTCGAACTGCGTGTCGAACTGGAACACCAGCGCGGGC > NC_002947/6050814‑6051109 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |