| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 6,067,254 | G→C | 5.8% | intergenic (+14/‑160) | phoR → / → PP_5322 | two‑component system sensor histidine kinase/metal ion transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 6,067,254 | 0 | G | C | 5.8% | 269.4 / 6.4 | 87 | intergenic (+14/‑160) | phoR/PP_5322 | two‑component system sensor histidine kinase/metal ion transporter |
| Reads supporting (aligned to +/- strand): ref base G (44/38); new base C (3/2); total (47/40) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.67e-01 | |||||||||||
GGGGCTCGCAATCGTCAAGCATGTGCTGATGCGCCACCGGGGCAAGCTGGAAATCAGCAGTGTACCGGGGCATGGCAGCACCTTTACCTGTCACTTTGCGCCAGCACAATTGGCCAACGAAAAGGCTTGAGATTGAG‑GCTGCGGCGCAGCCCTTCGCGGGCATGCCGGCTGCCACTGGGCCCGCAATGAGTCCGCTGCCCTTTGCTTTTACGGCCCCAGCCGCTACATTGGATCCCCTGTGCCAGCAAAAGCTGGCACTTTTTTTCTCTCTATCTCAAAGACGGACCCCGTA > NC_002947/6067111‑6067402 | ggggCTCGCAATCGTCAAGCATGTGCTGATGCGCCACCAGGGCAAGCTGGAAATCAGCAGTGTACCGGGGCATGGCAGCACCTTTACCTGTCACTTTGCGCCAGCACAATTGGCCAACGAAAAGGCTTGAGATTGAG‑GCTGCGGCGCAGc < 2:1360599/150‑1 (MQ=255) cTCGCAATCGTCAAGCATGTGCTGATGCGCCACCGGGGCAAGCTGGAAATCAGCAGTGTACCGGGGCATGGCAGCACCTTTACCTGTCACTTTGCGCCAGCACAATTGGCCAACGAAAAGGCTTGAGATTGAG‑GCTGCGGCGCAGCCCtt > 1:2074015/1‑150 (MQ=255) cAATCGTCAAGCATGTGCTGATGCGCCACCGGGGCAAGCTGGAAATCAGCAGTGTACCGGGGCATGGCAGCACCTTTACCTGTCACTTTGCGCCAGCACAATTGGCCAACGAAAAGGCTTGAGATTGAG‑GCTGCGGCGCAGCCCTTcgcg < 1:176616/150‑1 (MQ=255) aaTCGTTAAGCATGTTCTTCTGCGCCACCGGGGCAAGCTTGAAATCAGCAGTGTACCGGGGCATGGCAGCACCTTTACGTGTTCCTTTGCGCGAGCACAAGTGGCAGACGAAAAGGCCTGAGATTGAT‑CCTGCGGGGCAGCGCTTcactg > 2:648777/1‑146 (MQ=255) aaTCGTCAAGCATGTGCTGATGCTCCACCGGGGCAAGCTGGAAATCAGCAGTGTACCGGGGCATCGGGCTTCCTTTACCTGTCACTTTGCGCCAGCACAATTGGCCAACGAACAGGCTTGAGATTGAG‑GCTGCGGCGCAGCCCTTCGCgg < 1:1955543/150‑1 (MQ=255) aaTCGTCAAGCATGTGCTGATGCGCCACCGGGGCAAGCTGGAAATCAGCAGTGTACCGGGGCATGGCAGCACCTTTACCTGTCACTTTGCGCCAGCACAATTGGCCAACGAAAAGGCTTGAGATTGAG‑GCTGCGGCGCAGCCCTTCGCgg > 2:350662/1‑150 (MQ=255) aaTCGTCAAGCATGTGCTGATGCGCCACCGGGGCAAGCTGGAAATCAGCAGTGTACCGGGGCATGGCAGCACCTTTACCTGTCACTTTGCGCCAGCACAATTGGCCAACGAAAAGGCTTGAGATTGAG‑GCTGCGGCGCAGCCCTTCGCgg > 2:1816774/1‑150 (MQ=255) aTCGTCAAGCATGTGCTGATGCGCCACCGGGGCAAGCTGGAAATCAGCAGTGTACCGGGGCATGGCAGCACCTTTACCTGTCACTTTGCGCCAGCACAATTGGCCAACGAAAAGGCTTGAGATTGAG‑GCTGCGGCGCAGCCCTTCGCggg < 2:2055240/150‑1 (MQ=255) tCAAGCATGTGCTGATGCGCCACCGGGGCAAGCTGGGAATCAGCAGTGTACCGGGGCATGGGAGCACCTTTACCTGTCACTTTGCGCCAGCGCAATTGGCCAACGAAAAGGCTTGAGATTGAG‑GCTGCGGCGCAGCCCTTCGCGGGCATg > 1:203548/1‑150 (MQ=255) cATGTGCTGATGCGCCACCGGGGCAAGCTGGAAATCAGCAGTGTACCGGGGCATGGCAGCACCTTTACCTGTCACTTTGCGCCAGCACAATTGGCCAACGAAAAGGCTTGAGATTGAG‑GCTGCGGCGCAGCCCTTCGCGGGCATGCCGGc < 2:2268784/150‑1 (MQ=255) cATGTGCTGATGCGCCACCGGGGCAAGCTGGAAATCAGCAGTGTACCGGGGCATGGCAGCACCTTTACCTGTCACTTTGCGCCAGCACAATTGGCCAACGAAAAGGCTTGAGATTGAG‑GCTGCGGCGCAGCCCTTCGCGGGCATGCCGGc < 1:350662/150‑1 (MQ=255) tgCTGATGCGCCACCGGGGCAAGCTGGAAATCAGCAGTGTACCGGGGCATGGCAGCACCTTTACCTGTGACATGGCGCCAGCACAATTGGCCAACGAAAAGGCTTGAGATTGAG‑GCTGCGGCGCAGCCCTTCGCGGGCATGCCGGCTGcc > 1:781137/1‑150 (MQ=255) gATGCGCCACCGGGGCAAGCTGGAAATCAGCAGTGTACCGGGGCATGGCAGCACCTTTACCTGTCACTTTGCGCCAGCACAATTGGCCAACGAAAAGGCTTGAGATTGAG‑GCTGCGGCGCAGCCCTTCGCGGGCATGCCGGCTGCCACTg < 2:2101590/150‑1 (MQ=255) aTGCGCCACCGGGGCAAGCTGGAAATCAGCAGTGTACCGGGGCATGGCAGCACCTTTACCTGTCACTTTGCGCCAGCACAATTGGCCAACGAAAAGGCTTGAGATTGAG‑GCTGCGGCGCAGCCCTTCGCGGGCATGCCGGCTGCCACTgg > 1:2196552/1‑150 (MQ=255) gcgcCACCGGGGCAAGCTGGAAATCAGCAGTGTACCGGGGCATGGCAGCACCTTTACCTGTCACTTTGCGCCAGCACAATTGGCCAACGAAAAGGCTTGAGATTGAG‑GCTGCGGCGCAGCCCTTCGCGGGCATGCCGGCTGCCACTGGGc < 2:2196552/150‑1 (MQ=255) cgcCACCGGGGCAAGCTGGAAATCAGCAGTGTACCGGGGCATGGCAGCACCTTTACCTGTCACTTTGCGCCAGCACAATTGGCCAACGAAAAGGCTTGAGATTGAG‑GCTGCGGCGCAGCCCTTCGCGGGCATGCCGGCTGCCACTGGGcc < 1:2335176/150‑1 (MQ=255) gcCACCGGGGCCCGCTGGAAATCAGCAGTGTACCGGGGCATGGCAGCACCTTTACCTGTCACTTTGCGCCAGCACAATTGGCCAACGAAAAGGCTTGAGATTGAG‑GCTGCGGCGCAGCCCTTCGCGGGCATGCCGGCTGCCACTGGGccc < 1:1100064/150‑1 (MQ=255) gcCACCGGGGCAAGCTGGAAATCAGCAGTGTACCGGGGCATGGCAGCACCTTTACCTGTCACTTTGCGCCAGCACAATTGGCCAACGAAAAGGCTTGAGATTGAG‑GCTGCGGCGCAGCCCTTcgcg > 1:1451765/1‑126 (MQ=255) gcCACCGGGGCAAGCTGGAAATCAGCAGTGTACCGGGGCATGGCAGCACCTTTACCTGTCACTTTGCGCCAGCACAATTGGCCAACGAAAAGGCTTGAGATTGAG‑GCTGCGGCGCAGCCCTTcgcg < 2:1451765/126‑1 (MQ=255) aCCGGGGCAAGCTGGAAATCAGCAGTGTACCGGGGCATGGCAGCACCTTTACCTGTCACTTTGCGCCAGCACAATTGGCCAACGAAAAGGCTTGAGATTGAG‑GCTGCGGCGCAGCCCTTCGCGGGCATGCCGGCTGCCACTgg > 1:626159/1‑143 (MQ=255) aCCGGGGCAAGCTGGAAATCAGCAGTGTACCGGGGCATGGCAGCACCTTTACCTGTCACTTTGCGCCAGCACAATTGGCCAACGAAAAGGCTTGAGATTGAG‑GCTGCGGCGCAGCCCTTCGCGGGCATGCCGGCTGCCACTgg < 2:626159/143‑1 (MQ=255) gggCAAGCTGGAAATCAGCAGTGTACCGGGGCATGGCAGCACCTTTACCTGTCACTTTGCGCCAGCACAATTGGCCAACGAAAAGGCTTGAGATTGAG‑GCTGCGGCGCAGCCCTTCGCGGGCATGCCGGCTGCCACTGGGCCCGCAATGa < 2:1754300/150‑1 (MQ=255) aaGCTGGAAATCAGCAGTGTACCGGGGCATGGCAGCACCTTTACCTGTCACTTTGCGCCAGCACAATTGGCCAACGAAAAGGCTTGAGATTGAG‑GCTGCGGCGCAGCCCTTCGCGGGCATGCCGGCTGCCACTgg > 2:660012/1‑135 (MQ=255) aaGCTGGAAATCAGCAGTGTACCGGGGCATGGCAGCACCTTTACCTGTCACTTTGCGCCAGCACAATTGGCCAACGAAAAGGCTTGAGATTGAG‑GCTGCGGCGCAGCCCTTCGCGGGCATGCCGGCTGCCACTgg < 1:660012/135‑1 (MQ=255) aaGCTGGAAATCAGCAGTGTACCGGGGCATGGCAGCACCTTTACCTGTCACTTTGCGCCAGCACAATTGGCCAACGAAAAGGCTTGAGATTGAG‑GCTGCGGCGCAGCCCTTCGCGGGCATGCCGGCTGCCACTGGGCCCGCAATGAGTcc > 2:2135283/1‑150 (MQ=255) tGGAAATCAGCAGTGTACCGGGGCATGGCAGCACCTTTACCTGTCACTTTGCGCCAGCACAATTGGCCAACGAAAAGGCTTGAGATTGAG‑GCTGCGGCGCAGCACATCGCGGGCATGCCGGCATCCTCTTGGCCCGCAATGAGTCCGCTg > 2:265252/1‑150 (MQ=255) agcagTGTACCGGGGCATGGCAGCACCTTTACCTGTCACTTTGCGCCAGCACAATTGGCCAACGAAAAGGCTTGAGATTGAG‑GCTGCGGCGCAGCCCTTCGCGGGCATGCCGGCTGCCACTGGGc > 2:1671377/1‑125 (MQ=255) agcagTGTACCGGGGCATGGCAGCACCTTTACCTGTCACTTTGCGCCAGCACAATTGGCCAACGAAAAGGCTTGAGATTGAG‑GCTGCGGCGCAGCCCTTCGCGGGCATGCCGGCTGCCACTGGGc < 1:1671377/125‑1 (MQ=255) agcagTGTACCGGGGCATGGCAGCACCTTTACCTGTCACTTTGCGCCAGCACAATTGGCCAACGAAAAGGCTTGAGATTGAG‑GCTGCGGCGCAGCCCTTCGCGGGCATGCCGGCTGCCACTGGGCCCGCAATGAGTCCGCTGCCCTTTGc < 1:265252/150‑1 (MQ=255) gcagTGTACCGGGGCATGGCAGCACCTTTACCTGTCACTTTGCGCCAGCACAATTGGCCAACGAAAAGGCTTGAGATTGAG‑GCTGCGGCGCAGCCCTTCGCgg < 1:940045/103‑1 (MQ=255) gcagTGTACCGGGGCATGGCAGCACCTTTACCTGTCACTTTGCGCCAGCACAATTGGCCAACGAAAAGGCTTGAGATTGAG‑GCTGCGGCGCAGCCCTTCGCgg > 2:940045/1‑103 (MQ=255) gcagTGTACCGGGGCATGGCAGCACCTTTACCTGTCACTTTGCGCCAGCACAATTGGCCAACGAAAAGGCTTGAGATTGAG‑GCTGCGGCGCAGCCCTTCGCGGGCATGCCGGCTGCCACTGGGCCCGCAATGAGTCCGCTGCCCTTTGCt > 2:1155914/1‑150 (MQ=255) gcagTGTACCGGGGCATGGCAGCACCTTTACCTGTCACTTTGCGCCAGCACAATTGGCCAACGAAAAGGCTTGAGATTGAG‑GCTGCGGCGCAGCCCTTCGCGGGCATGCCGGCTGCCACTGGGCCCGCAATGAGTCCGCTGCCCTTTGCt > 1:1698941/1‑150 (MQ=255) gtgtACCGGGGCATGGCAGCACCTTTACCTGTCACTTTGCGCCAGCACAATTGGCCAACGAAAAGGCTTGAGATTCAGCGCCGCGG‑GCAGCCCTTCGCGGGCATGCCGGCTGCCACTGGGCCCGCAATGAGTCCGCTGCCCTTTGCtttt > 1:1621307/1‑150 (MQ=255) gtgtACCGGGGCATGGCAGCACCTTGACCTGTCACTTTGCGCCAGCACAATTGGCCAACGAAAAGGCTTGAGATTGAG‑GCTGCGGCGCAGCCCTTCGCGGGCATGCCGGCTGCCACTGGGCCCGCAATGAGTCCGCTGCCCTTTGCtttt < 2:640691/150‑1 (MQ=255) tgtACCGGGGCATGGCAGCACCTTTACCTGTCACTTTGCGCCAGCACAATTGGCCAACGAAAAGGCTTGAGATTGAG‑GCTGCGGCGCAGCCCTTCGCGGGCATGCCGGCTGCCACTGGGCCCGCAATGAGTCCGCTGCCCTTTGCTTTTa > 1:1494080/1‑150 (MQ=255) gtACCGGGGCATGGCAGCACCTTTACCTGTCACTTTGCGCCAGCACAATTGGCCAACGAAAAGGCTTGAGATTGAG‑GCTGCGGCGCAGCCCTTCGCGGGCATGCCGGCTGCCACTGGGCCCGCAATGAGTCCGCTGCCCTTTGCTTTTAc < 2:781137/150‑1 (MQ=255) cGGGGCATGGCAGCACCTTTACCTGTCACTTTGCGCCAGCACAATTGGCCAACGAAAAGGCTTGAGATTGAG‑GCTGCGGCGCAGCCCTTCGCGGGCAt > 1:396383/1‑98 (MQ=255) cGGGGCATGGCAGCACCTTTACCTGTCACTTTGCGCCAGCACAATTGGCCAACGAAAAGGCTTGAGATTGAG‑GCTGCGGCGCAGCCCTTCGCGGGCAt < 2:396383/98‑1 (MQ=255) cGGGGCATGGCAGCACCTTTACCTGTCACTTTGCGCCAGCACAATTGGCCAACGAAAAGGCTTGAGATTGAG‑GCTGCGGCGCAGCCCTTCGCGGGCATGCCGGCTGCCACTGGGCCCGCAATGAGTCCGCTGCCCTTTGCTTTTACGGcc > 2:880232/1‑150 (MQ=255) cATGGCAGCACCTTTACCTGTCACTTTGCGCCAGCACAATTGGCCAACGAAAAGGCTTGAGATTGAG‑GCTGCGGCGCAGCCCTTCGCGGGCATGCCGGCTGCCACTGGGCCCGCAATGAGTCCGCTGCCCTTTGCTTTTACGGCCCCAGc > 2:2008368/1‑150 (MQ=255) gcagcaCCTTTACCTGTCACTTTGCGCCAGCACAATTGGCCAACGAAAAGGCTTGAGATTGAG‑GCTGCGGCGCAGCCCTTCGCGGGCATGCCGGCTGCCACTGGGCCCGCAATGAGTCCGCTGCCCTTTGCTTTTACGGCCCCAGCCGCt > 1:102462/1‑150 (MQ=255) aCCTTTACCTGTCACTTTGCGCCAGCACAATTGGCCAACGAAAAGGCTTGAGATTGAG‑GCTGCGGCGCAGCCCTTCGCGGGCATGCCGGCTGCCACTGGGCCCGCAATGAGTCCGCTGCCCTTTGCTTTTACGGCCCCAGCCGCTACAtt > 2:1623975/1‑150 (MQ=255) cTTTACCTGTCACTTTGCGCCAGCACAATTGGCCAACGAAAAGGCTTGAGATTGAG‑GCTGCGGCGCAGCCCTTCGCGGGCATGCCGGCTGCCACTGGGCCCGCAATGAGTCCGCTGCCCTTTGCTTTTACGGCCCCAGcc > 2:404295/1‑140 (MQ=255) cTTTACCTGTCACTTTGCGCCAGCACAATTGGCCAACGAAAAGGCTTGAGATTGAG‑GCTGCGGCGCAGCCCTTCGCGGGCATGCCGGCTGCCACTGGGCCCGCAATGAGTCCGCTGCCCTTTGCTTTTACGGCCCCAGcc < 1:404295/140‑1 (MQ=255) cTGTCACTTTGCGCCAGCACAATTGGCCAACGAAAAGGCTTGAGATTGAG‑GCTGCGGCGCAGCCCTTCGCGGGCATGCCGGCTGCCACTGGGCCCGCAATGAGTCCGCTGCCCTTTGCTTTTACGGCCCCAGCCGCTACATTGGATcccc > 2:1027784/1‑150 (MQ=255) tGTCACTTTGCGCCAGCACAATTGGCCAACGAAAAGGCTTGAGATTGAG‑GCTGCGGCGCAGCCCTTCGCGGGCATGCCGGCTGCCACTGGGc < 1:2340860/92‑1 (MQ=255) tGTCACTTTGCGCCAGCACAATTGGCCAACGAAAAGGCTTGAGATTGAG‑GCTGCGGCGCAGCCCTTCGCGGGCATGCCGGCTGCCACTGGGc > 2:2340860/1‑92 (MQ=255) tGTCACTTTGCGCCAGCACAATTGGCCAACGAAAAGGCTTGAGATTGAG‑GCTGCGGCGCAGCCCTTCGCGGGCATGCCGGCTGCCACTGGGCCCGCAATGAGTCCGCTGCCCTTTGCTTTTACGGCCCCAGCCGCTACATGGGATCCCCt > 1:371251/1‑150 (MQ=255) gTCACTTTGCGCCAGCACAATTGGCCAACGAAAAGGCTTGAGATTGAG‑GCTGCGGCGCAGCCCTTCGCGGGCATGCCGGCTGCCACTGGGCCCGCAATGAGTCCGCTGCCCTTTGCTTTTACGGCCCCAGCCGCTACATTgg > 2:653084/1‑142 (MQ=255) gTCACTTTGCGCCAGCACAATTGGCCAACGAAAAGGCTTGAGATTGAG‑GCTGCGGCGCAGCCCTTCGCGGGCATGCCGGCTGCCACTGGGCCCGCAATGAGTCCGCTGCCCTTTGCTTTTACGGCCCCAGCCGCTACATTgg < 1:653084/142‑1 (MQ=255) aCTTTGCGCCAGCACAATTGGCCAACGAAAAGGCTTGAGATTGAG‑GCTGCGGCGCAGCCCTTCGCGGGCATGCCGGCTGCCACTGGGCCCGCAATGAGTCCGCTGCCCTTTGCTTTTACGGCCCCAGCCGCCAAATTAAATcccaggtgt > 2:136472/1‑144 (MQ=255) tttGCGCCAGCACAATTGGCCAACGAAAAGGCTTGAGATTGAG‑GCTGCGGCGCAGCCCTTCGCGGGCATGCCGGCTGCCACTGGGCCCGCAATGAGTCCGCTGCCCTTTGCTTTTACGGCCCCAGCCGCTACATTGGATCCCCTGTGCCa > 2:2060057/1‑150 (MQ=255) ccAGCACAATTGGCCAACGAAAAGGCTTGAGATTGAG‑GCTGCGGCGCAGCCCTTCGCGGGCATGCCGGCTGCCACTGGGCCCGCAATGAGTCCGCTGCCCTTTGCTTTTACGGCCCCAGCCGCTACATTGGATCCCCTGTGCCAGCaaaa < 1:1995046/150‑1 (MQ=255) ccAGCACAATTGGCCAACGAAAAGGCTTGAGATTGAG‑GCTGCGGCGCAGCCCTTCGCGGGCATGCCGGCTGCCACTGGGCCCGCAATGAGTCCGCTGCCCTTTGCTTTTACGGCCCCAGCCGCTACATTGGATCCCCTGTGCCAGCaaaa > 1:390751/1‑150 (MQ=255) cAGCACAATTGGCCAACGAAAAGGCTTGAGATTGAG‑GCTGCGGCGCAGCCCTTCGCGGGCATGCCGGCTGCCACTGGGCCCGCAATGAGTCCGCTGCCCTTTGCTTTTa < 2:960937/109‑1 (MQ=255) cAGCACAATTGGCCAACGAAAAGGCTTGAGATTGAG‑GCTGCGGCGCAGCCCTTCGCGGGCATGCCGGCTGCCACTGGGCCCGCAATGAGTCCGCTGCCCTTTGCTTTTa > 1:960937/1‑109 (MQ=255) aGCACAATTGGCCAACGAAAAGGCTTGAGATTGAG‑GCTGCGGCGCAGCCCTTCGCGGGCATGCCGGCTGCCACTGGGCCCGCAATGAGTCCGCTGCCCTTTGCTTTTACGGCCCCAGCCGCTACAAACGGTTGCCTGTGCCAGCAAAAGc > 1:125944/1‑150 (MQ=255) aGCACAATTGGCCAACGAAAAGGCTTGAGATTGAG‑GCTGCGGCGCAGCCATTCGCGGGCATGCCGGCTGCCACTGGGCCAGCAATGAGTCCGCTGCCCTTTGCTTTTACGGCCCCAGCCGCTACATTGGATCCCCTGTGCCAGCAAAAGc < 1:1425845/150‑1 (MQ=255) gCACAATTGGCCAACGAAAAGGCTTGAGATTGAG‑GCTGCGGCGCAGCCCTTCGCGGGCATGCCGGCTGCCACTGGGCCCGCAATGAGTCCGCTGCCCTTTGCTTTTACGGCCCCAGCCGCTACATTGGATCCCCTGTGCCAGCAAAAGCt < 2:1494080/150‑1 (MQ=255) ccagttGGCCGACGCAAAGGCTTGATATTGCG‑GCTGCGGCGCAACCCTTCGCGGGCATGCCGGCTGCCACTGGGCCCGCCACGAGTCCGCTGCCCTTTGCTTCTCCGGCCCCAGCCGCTACATTGGCTCCCCTGTGCCAGCAAAAGCttg < 2:203548/146‑3 (MQ=255) acaATTGGCCAACGAAAAGGCTTGAGATTGAG‑GCTGCGGCGCAGCCCTTCGCGGGCATGCCGGCTGCCACTGGGCCCGCAATGAGTCCGCTGCCCTTTGCTTTTACGGCCCCAGCCGCTACATTGGATCCCCTGTGCCAGCAAAAGCTgg < 1:1589997/150‑1 (MQ=255) acaATTGGCCAACGAAAAGGCTTGAGATTGAG‑GCTGCGGCGCAGCCCTTCGCGGGCATGCCGGCTGCCACTGGGCCCGCAATGAGTCCGCTGCCCTTTGCTTTTACGGCCCCAGCCGCTACATTGGATCCCCTGTGCCAGCAAAAGCTgg < 1:136472/150‑1 (MQ=255) aaTTGGCCAACGAAAAGGTTTGAGATTGAG‑GCTGCGGCGCAGCCCTTCGCGGGCATGCCGGCTGCCACTGGGCCCGCAATGAGTCCGCTGCCCTTTGCTTTTACGGCCCCAGCCGCTACATTGGATCCCCTGTGCCAGCAAAAGCTGGCa > 1:1903549/1‑150 (MQ=255) ggCCAACGAAAAGGCTTGAGATTGAG‑GCTGCGGCGCAGCCCTTCCCGGGCATGCCGGCTGCCACTGGGCCCGCAATGAGTCCGCTGCCCTTTGCTTCTACGGCCCCAGCCGCTACATTGGATCCCCTGTGCCAGCTTTTGCTGGCAcagg < 2:2074015/150‑4 (MQ=255) ccAACGAAAAGGCTTGAGATTGAG‑GCTGCGGCGCAGCCCTTCGCGGGCATGCCGGCTGCCACTGGGCCCGCAATGAGTCCGCTGCCCTTTGCTTTTACGGCCCCAGCCGCTACATTGGATCCCCt > 2:1255353/1‑125 (MQ=255) ccAACGAAAAGGCTTGAGATTGAG‑GCTGCGGCGCAGCCCTTCGCGGGCATGCCGGCTGCCACTGGGCCCGCAATGAGTCCGCTGCCCTTTGCTTTTACGGCCCCAGCCGCTACATTGGATCCCCt < 1:1255353/125‑1 (MQ=255) aaCGAAAAGGCTTGAGATTGAG‑GCTGCGGCGCAGCCCTTCGCGGGCATGCCGGCTGCCACTGGGCCCGCAATGAGTCCGCTGCCCTTTGCTTTTACGGCCCCAGCCGCTACATTGGATCCCCTGTGCCAGCAAAAGCTGGCACttttttt > 1:173963/1‑150 (MQ=255) aaCGAAAAGGCTGGAGATTGAG‑GCTGCGGCGCAGCCCTTCGCGGGCATGCCGGCTGCCTCTGAGCCCGCAATGAGGCCGTTGCCCTTTGCTTTTACGGCCCCAGTCGCTACATTGGATCCCCTGTGCCAGCAAAAGCTGGCACttttttt < 1:1608930/150‑1 (MQ=255) aaaGGCTTGAGATTGAG‑GCTGCGGCGCAGCCCTTCGCGGGCATGCCGGc > 2:739827/1‑49 (MQ=255) aaaGGCTTGAGATTGAG‑GCTGCGGCGCAGCCCTTCGCGGGCATGCCGGc < 1:739827/49‑1 (MQ=255) aaGGCTTGAGATTGAG‑GCTGCGGCGCAGCCCTTCGCGGGCATGCCGGCTGCCACTGGGCCCGCAATGAGTCCGCTGCCCTTTGCTTTTACGGCCCCAGCCGCTACATTGGATCCCCTGTGCCAGCAAAAGCTGGCACTTTTTTtctct > 1:481280/1‑148 (MQ=255) aaGGCTTGAGATTGAG‑GCTGCGGCGCAGCCCTTCGCGGGCATGCCGGCTGCCACTGGGCCCGCAATGAGTCCGCTGCCCTTTGCTTTTACGGCCCCAGCCGCTACATTGGATCCCCTGTGCCAGCAAAAGCTGGCACTTTTTTtctct < 2:481280/148‑1 (MQ=255) ggCTTGAGATTGAG‑GCTGCGGCGCAGCCCTTCGCGGGCATGCCGGCTGCCACTGGGCCCGCAATGAGTCCGCTGCCCTTTGCTTTTACGGCCCCAGCCGCTACATTGGATCCCCTGTGCCAGCAAAAGCTGGCACTTTTTTTCTCTCTAt < 2:173963/150‑1 (MQ=255) gCTTGAGATTGAG‑GCTGCGGCGCAGCCCTTCGCGGGCATGCCGGCTGCCACTGGGCCCGCAATGAGTCCGCTGCCCTTTGCt < 1:2081390/82‑1 (MQ=255) gCTTGAGATTGAG‑GCTGCGGCGCAGCCCTTCGCGGGCATGCCGGCTGCCACTGGGCCCGCAATGAGTCCGCTGCCCTTTGCt > 2:2081390/1‑82 (MQ=255) ttGAGATTGAG‑GCTGCGGCGCAGCCCTTCGCGGGCATGCCGGCTGCCACTGGGCCCGCAATGAGTCCGCTGCCCTTTGCtt < 2:1735716/81‑1 (MQ=255) ttGAGATTGAG‑GCTGCGGCGCAGCCCTTCGCGGGCATGCCGGCTGCCACTGGGCCCGCAATGAGTCCGCTGCCCTTTGCtt > 1:1735716/1‑81 (MQ=255) ttGAGATTGAG‑GCTGCGGCGCAGCCCTTCGCGGGCATGCCGGCTGCCACTGGGCCCGCAATGAGTCCGCTGCCCTTTGCTTTTACGGCCCCAGCCGCTACATTGGATCCCCTGTGCCAGCAAAAGCTGGCACTTTTTTTCTCTCTAtctc > 2:1365396/1‑150 (MQ=255) ttGAGATTGAG‑GCTGCGGCGCAGCCCTTCGCGGGCATGCCGGCTGCCACTGGGCCCGCAATGAGTCCGCTGCCCTTTGCTTTTACGGCCCCAGCCGCTACATTGGATCCCCTGTGCCAGCAAAAGCTGGCACTTTTTTTCTCTCTAtctc > 1:1652643/1‑150 (MQ=255) tGAGATTGAG‑GCTGCGGCGCAGCCCTTCGCGGGCATGCCGGCTGCCACTGGGCCCGCAATGAGTCCGCTGCCCTTTGCTTTTACGGCCCCAGCCGCTACATTGGATCCCCTGTGCCAGCAAAAGCTGGCACTTTTTTTCTCTCTATCTCa > 2:2210212/1‑150 (MQ=255) agaTTGAG‑GCTGCGGCGCAGCCCTTCGCGGGCATGCCGGCTGCCACTGGGCCCGCAATGAGTCCGCTGCCCTTTGCTTTTACGGCCCCAGCCGCTACATTGGATCCCCTGTGCCAGCAAAAGCTGGCACTTTTTTTCTCTCTATCTCaaa > 2:930934/1‑150 (MQ=255) agg‑gCTGCGCCGCAGCCCTTCGCGGGCATGCCGGCTGCCACTGGGCCCGCAATGAGTCCGCTGCCCTTTGCTTTTACGGCCCCAGCCGCTACAtt > 2:5212/3‑95 (MQ=255) agg‑gCTGCGCCGCAGCCCTTCGCGGGCATGCCGGCTGCCACTGGGCCCGCAATGAGTCCGCTGCCCTTTGCTTTTACGGCCCCAGCCGCTACAtt < 1:5212/93‑1 (MQ=255) gg‑gCTGCGCCGCAGCCCTTCGCGGGCATGCCGGCTGCCACTGGGCCCGCAATGAGTCCGCTGCCCTTTGCTTTTACGGCCCCAGCCGCTACATTGGATCCCCTGTGCCAGCAAAAGCTGGCACTTTTTTTCTCTCTATCTCAAAGACGGa > 1:1896675/2‑150 (MQ=255) g‑gCTGCGCCGCAGCCCTTCGCGGGCATGCCGGCTGCCACTGGGCCCGCaa < 1:1753711/50‑1 (MQ=255) g‑gCTGCGCCGCAGCCCTTCGCGGGCATGCCGGCTGCCACTGGGCCCGCaa > 2:1753711/1‑50 (MQ=255) gcggcgCAGCCCTTCGCGGGCATGCCGGCTGCCACTGGGCCCGCAATGAGTCCGCTGCCCTTTGCTTTTACGGCCCCAGCCGCTACATTGGATCCCCTGTGCCAGCAAAAGCTGGCACTTTTTTTCTCTCTATCTCAAAGACGGACCCCg > 2:1639560/1‑150 (MQ=255) ggcgAAACCCCTCGCGGGCATCCCGGCTGCCACAGGGCACGCAATGAGAGCGCTGCCCTTTGCTGTTATGGCCCCAGACGCCACATTGGATCCCCTGTGCCAGCACCAGCGGGCACTTTTTTTCCCTCTATCTCAAACACGGGCCTCGTa > 2:888025/1‑150 (MQ=255) gcgcAGCCCTTCGCGGGCATGCCGGCTGCCACTGGGCCCGCAATGAGTCCGCTGCCCTTTGCTTTTACGGCCCCAGCCGCTACATTGGATCCCCTGTGCCAGCAAAAGCTgg > 1:2273875/1‑112 (MQ=255) gcgcAGCCCTTCGCGGGCATGCCGGCTGCCACTGGGCCCGCAATGAGTCCGCTGCCCTTTGCTTTTACGGCCCCAGCCGCTACATTGGATCCCCTGTGCCAGCAAAAGCTgg < 2:2273875/112‑1 (MQ=255) | GGGGCTCGCAATCGTCAAGCATGTGCTGATGCGCCACCGGGGCAAGCTGGAAATCAGCAGTGTACCGGGGCATGGCAGCACCTTTACCTGTCACTTTGCGCCAGCACAATTGGCCAACGAAAAGGCTTGAGATTGAG‑GCTGCGGCGCAGCCCTTCGCGGGCATGCCGGCTGCCACTGGGCCCGCAATGAGTCCGCTGCCCTTTGCTTTTACGGCCCCAGCCGCTACATTGGATCCCCTGTGCCAGCAAAAGCTGGCACTTTTTTTCTCTCTATCTCAAAGACGGACCCCGTA > NC_002947/6067111‑6067402 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |