| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 6,070,833 | A→T | 8.4% | intergenic (‑133/+30) | PP_5324 ← / ← phoU | two‑component system response regulator/phosphate transport‑associated protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 6,070,833 | 0 | A | T | 8.4% | 413.9 / 21.2 | 130 | intergenic (‑133/+30) | PP_5324/phoU | two‑component system response regulator/phosphate transport‑associated protein |
| Reads supporting (aligned to +/- strand): ref base A (60/59); new base T (6/5); total (66/64) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.87e-01 | |||||||||||
Only 100 of 133 total aligned reads displayed.
CATTCACTTTACTCATCGATACTCCTTTTGAATCCCGACTAGCCTACTGCCAATGATGGCCACTTGCTACAACCTGGTCACGCCGGGACTTCTTCACATCGTTCGCGGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCAAGGCCGGGCGTCGATGCTCGGGAGCAACCTTACTTATCGTCAGATTCACCCGGAACATTAGCCTTTTCGCCGTTGGCGACAGCAGTGCCCTGCACTTCTGCCGTCATGCGCTTGAGGCCCATGTGGCGCACGTCGGTGCCGCGCACCA > NC_002947/6070685‑6070981 | caTTCACTTTACTCATCGATACTCCTTTTGAATCCCGACTAGCCTACTGCCACTCGGTCTCTCTTGCTACAACCTGGTCACGCCGGGACTTCTTCACATCGTTCGCGGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCaa < 1:636025/150‑1 (MQ=255)caTTCACTTTACTCATCGATACTCCTTTTGAATCCCGACTAGCCTACTGCCAATGATGGCCACTTGCTACAACCTGGTCACGCCGGGACTTCTTCACATCGTTCGCGGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCaa < 1:862049/150‑1 (MQ=255) ttCACTTTACTCATCGATACTCCTTTTGAATCCCGACTAGCCTACTGCCAATGATGGCCACTTGCTACAACCTGGTCACGCCGGGACTTCTTCACATCGTTCGCGGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCAAg < 2:1422970/149‑1 (MQ=255) tCATCGATTCTCCTTTTGAATCCCGACTAGCCTACTGCCAATGATGGCCACTTGCTACAACCTGGTCACGCCGGGACTTCTTCACATCGTTCGCGGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCTTGGCCGGGCGttt < 1:66817/150‑3 (MQ=255) tCATCGATACTCCTTTTGAATCCCGACTAGCCTACTGCCAATGATGGCCACTTGCTACAACCTGGTCACGCCGGGACTTCTTCACATCGTTCGCGGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCTTGGCCGGGc > 2:986950/1‑146 (MQ=255) tCATCGATACTCCTTTTGAATCCCGACTAGCCTACTGCCAATGATGGCCACTTGCTACAACCTGGTCACGCCGGGACTTCTTCACATCGTTCGCGGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCTTGGCCGGGc < 1:986950/146‑1 (MQ=255) tCATCGATACTCCTTTTGAATCCCGACTAGCCTACTGCCAATGATGGCCACTTGCTACAACCTGGTCACGCCGGGACTTCTTCACATCGTTCGCGGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCAAGGCCGGGCGTCg > 1:121958/1‑150 (MQ=255) aTCGATACTCCTTTTGAATCCCGACTAGCCTACTGCCAATGATGGCCACTTGCTACAACCTGGTCACGCCGGGACTTCTTCACATCGTTCGCGGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCAAGGCCGGGCGTCGAt > 1:1787594/1‑150 (MQ=255) tCGATACTCCTTTTGAATCCCGACTAGCCTACTGCCAATGATGGCCACTTGCTACAACCTGGTCACGCCGGGACTTCTTCACATCGTTCGCGGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCAAGGCCGGGCGTCGATg > 1:589126/1‑150 (MQ=255) aCTCCTTTTGAATCCCGACTAGCCTACTGCCAATGATGGCCACTTGCTACAACCTGGTCACGCCGGGACTTCTTCACATCGTTCGCGGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCAAg > 1:2395745/1‑131 (MQ=255) aCTCCTTTTGAATCCCGACTAGCCTACTGCCAATGATGGCCACTTGCTACAACCTGGTCACGCCGGGACTTCTTCACATCGTTCGCGGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCAAg < 2:2395745/131‑1 (MQ=255) tCCTTTTGAATCCCGACTAGCCTACTGCCAATGATGGCCACTTGCTACAACCTGGTCACGCCGGGACTTCTTCACATCGTTCGCGGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCAAGGCCGGGCGTCGa < 2:984499/141‑1 (MQ=255) tCCTTTTGAATCCCGACTAGCCTACTGCCAATGATGGCCACTTGCTACAACCTGGTCACGCCGGGACTTCTTCACATCGTTCGCGGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCAAGGCCGGGCGTCGATGCTCGGGa < 1:1474302/150‑1 (MQ=255) tCCTTTTGAATCCCGACTAGCCTACTGCCAATGATGGCCACTTGCTACAACCTGGTCACGCCGGGACTTCTTCACATCGTTCGCGGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCAAGGCCGGGCGTCGATGCTCGGGa < 2:2193203/150‑1 (MQ=255) tCCTTTTGAATCCCGACTAGCCTACTGCCAATGATGGCCACTTGCTACAACCTGGTCACGCCGGGACTTCTTCACATCGTTCGCGGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCAAGGCCGGGCGTCGATGCTCGGGa < 1:1960668/150‑1 (MQ=255) cTTTTGAATCCCGACTAGCCTACTGCCAATGATGGCCACTTGCTACAACCTGGTCACGCCGGGACTTCTTCACATCGTTCGCGGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCAAGGCCGGGCGTCGATGCTCGGGAGc > 2:154915/1‑150 (MQ=255) ttttGAATCCCGACTAGCCTACTGCCAATGATGGCCACTTGCTACAACCTGGTCACGCCGGGACTTCTTCACATCGTTCGCGGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCAAGGCCgg > 1:1860875/1‑131 (MQ=255) ttttGAATCCCGACTAGCCTACTGCCAATGATGGCCACTTGCTACAACCTGGTCACGCCGGGACTTCTTCACATCGTTCGCGGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCAAGGCCgg < 2:1860875/131‑1 (MQ=255) ttttGAATCCCGACTAGCCTACTGCCAATGATGGCCACTTGCTACAACCTGGTCACGCCGGGACTTCTTCACATCGTTCGCGGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCAAGGCCGGGCGTCGATGCTCgg < 1:1058005/145‑1 (MQ=255) ttttGAATCCCGACTAGCCTACTGCCAATGATGGCCACTTGCTACAACCTGGTCACGCCGGGACTTCTTCACATCGTTCGCGGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCAAGGCCGGGCGTCGATGCTCgg > 2:1058005/1‑145 (MQ=255) ttGAATCCCGACTAGCCTACTGCCAATGATGGCCACTTGCTACAACCTGGTTACGCCGGGACTTCTTCACATCGTTCGCGGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCAAGGCCGGGCGTCGATGCTCGGGAGCAAc < 2:4143/150‑1 (MQ=255) cGACTAGCCTACTGCCAATGATGGCCACTTGCTACAACCTGGTCACGCCGGGACTTCTTCACATCGTTCGCGGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCAAGGCCGGGCGTCGATGCTCGGGAGCAACcttactta > 2:1768689/1‑150 (MQ=255) aCTAGCCTACTGCCAATGATGGCCACTTGCTACAACCTGGTCACGCCGGGACTTCTTCACATCGTTCGCGGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCAAGGCCGGGCGTCGATGCTCGGGAGCAACCTTACTTATc > 1:345967/1‑150 (MQ=255) gCCTACTGCCAATGATGGCCACTTGCTACAACCTGGTCACGCCGGGACTTCTTCACATCGTTCGCGGGTGCCTGCCGGCTCTCGACCGCGAACGAAAACGCCCGGCCAAGGCCGGGCGTCGATGCTCGGGAGCAACCTTACTTATCGTCa < 2:2264111/150‑1 (MQ=255) cTACTGCCAATGATGGCCACTTGCTACAACCTGGTCACGCCGGGACTTCTTCACATCGTTCGCGGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCAAGGCCGGGCGTCGATGCTCGGGAGCAACCTTACTTATCGTCAGa < 1:1470743/150‑1 (MQ=255) tGCCAATGATGGCCACTTGCTACAACCTGGTCACGCCGGGACTTCTTCACATCGTTCGCGGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCAAGGCCGGGCGTCGATGCTCGGGAGCAACCTTACTTATCGTCAGATTCa > 1:1294037/1‑150 (MQ=255) tGCCAATGATGGCCACTTGCTACAACCTGGTCACGCCGGGACTTCTTCACATCGTTCGCGGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCAAGGCCGGGCGTCGATGCTCGGGAGCAACCTTACTTATCGTCAGATTCa > 2:2017003/1‑150 (MQ=255) ccAATGATGGCCACTTGCTACAACCTGGTCACGCCGGGACTTCTTCACATCGTTCGCGGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCAAGGCCGGGCGTCGATGCTCGGGAGCAACCTTACTTATCGTCAGAt < 2:1195478/145‑1 (MQ=255) ccAATGATGGCCACTTGCTACAACCTGGTCACGCCGGGACTTCTTCACATCGTTCGCGGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCAAGGCCGGGCGTCGATGCTCGGGAGCAACCTTACTTATCGTCAGATTAAcc > 2:2227533/1‑150 (MQ=255) cAATGATGGCCACTTGCTACAACCTGGTCACGCCGGGACTTCTTCACATCGTTCGCGGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCAAGGCCGGGCGTCGATGCTCGGGAGCAACCTTACTTATCg > 2:2021606/1‑138 (MQ=255) cAATGATGGCCACTTGCTACAACCTGGTCACGCCGGGACTTCTTCACATCGTTCGCGGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCAAGGCCGGGCGTCGATGCTCGGGAGCAACCTTACTTATCg < 1:2021606/138‑1 (MQ=255) cAATGATGGCCACTTGCTACAACCTGGTCACGCCGGGACTTCTTCACATCGTTCGCGGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCAAGGCCGGGCGTCGATGCTCGGGAGCAACCTTACTTATCGTCAGATTCAccc > 1:1183575/1‑150 (MQ=255) aaTGATGGCCACTTGCTACAACCTGGTCACGCCGGGACTTCTTCACATCGTTCGCGGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCAAGGCCGGGCGTCGATGCTCGGGAGCAACCTTACTTATCGTCAGATTCACCCg > 2:971997/1‑150 (MQ=255) tgatgGCCACTTGCTACAACCTGGTCACGCCGGGACTTCTTCACATCGTTCGCGGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCTTGGCCGGGCGttt > 2:853603/1‑107 (MQ=255) tgatgGCCACTTGCTACAACCTGGTCACGCCGGGACTTCTTCACATCGTTCGCGGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCTTGGCCGGGCGttt < 1:853603/109‑3 (MQ=255) tgatgGCCACTTGCTACAACCTGGTCACGCCGGGACTTCTTCACATCGTTCGCGGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCAAGGCCGGGCGTCGATGCTCGGGAGCAACCTTACTTATCGTCAGATTCACCCGGa > 2:1851398/1‑150 (MQ=255) ccACTTGCTACAACCTGGTCACGCCGGGACTTCTTCACATCGTTCGCGGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCAAGGCCGGGCGTCGATGCTCGGGAGCAACCTTACTTATCGTCAGATTCACCCGGAACATTa < 1:2087109/150‑1 (MQ=255) ccACTTGCTACAACCTGGTCACGCCGGGACTTCTTCACATCGTTCGCGGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCAAGGCCGGGCGTCGATGCTCGGGAGCAACCTTACTTATCGTCAGATTCACCCGGAACATTa < 1:154915/150‑1 (MQ=255) cACTTGCTACAACCTGGTCACGCCGGGACTTCTTCACATCGTTCGCGGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCAAGGCCGGGCGTCGATGCTCGGGAGCAACCTTACTTATCGTCAGATTCACCCGGAACATTAg < 2:345967/150‑1 (MQ=255) cTTGCTACAACCTGGTCACGCCGGGACTTCTTCACATCGTTCGCGGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCAAGGCCg < 1:507756/93‑1 (MQ=255) cTTGCTACAACCTGGTCACGCCGGGACTTCTTCACATCGTTCGCGGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCAAGGCCGGGCGACGCTGCTAGGAAGCCACCTTACTCATCGTCAGATTCACCCGGAACATTAGcc > 2:873323/1‑150 (MQ=255) ttGCTACAACCTGGTCACGCCGGGACTTCTTCACATCGTTCGCGGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCAAGGcc > 1:2265140/1‑91 (MQ=255) ttGCTACAACCTGGTCACGCCGGGACTTCTTCACATCGTTCGCGGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCAAGGcc < 2:2265140/91‑1 (MQ=255) tGCTACAACCTGGTCACGCCGGGACTTCTTCACATCGTTCGCGGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCAAGGCCGGGCGTCGATGCTCGGGAGCAACCTTACTTATCGTCAGATTAACCCGGAACATTAGCCtt < 1:2227533/150‑1 (MQ=255) cTACAACCTGGTCACGCCGGGACTTCTTCACATCGTTCGCGGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCAAGGCCGGGTGTCGATGCTCGGGAGCAACCTTACTTATCGTCAGATTCACCCGGAACATTAGCCtttt < 1:1373034/150‑1 (MQ=255) cTACAACCTGGTCACGCCGGGACTTCTTCACATCGTTCGCGGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCAAGGCCGGGCGTCGATGCTCGGGAGCAACCTTACTTATCGTCAGATTCACCCGGAACATTAGCCtttt < 1:941758/150‑1 (MQ=255) cTACAACCTGGTCACGCCGGGACTTCTTCACATCGTTCGCGGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCAAGGCCGGGCGTCGATGCTCGGGAGCAACCTTACTTATCGTCAGATTCACCCGGAACATTAGCCtttt > 1:2207645/1‑150 (MQ=255) tACAACCTGGTCACGCCGGGACTTCTTCACATCGTTCGCGGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCAAGGCCGGGCGTCGATGCTCGGGAGCAACCTTACTTATCGTCAGATTCACCCGGAACATTa < 1:25214/142‑1 (MQ=255) tACAACCTGGTCACGCCGGGACTTCTTCACATCGTTCGCGGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCAAGGCCGGGCGTCGATGCTCGGGAGCAACCTTACTTATCGTCAGATTCACCCGGAACATTa > 2:25214/1‑142 (MQ=255) tACAACCTGGTCACGCCGGGACTTCTTCACATCGTTCGCGGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCAAGGCCGGGCGTCGATGCTCGGGAGCAACCTTACTTATCGTCAGATTCACCCGGAACATTAGCCTTTTc > 1:931347/1‑150 (MQ=255) tACAACCTGGTCACGCCGGGACTTCTTCACATCGTTCGCGGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCAAGGCCGGGCGTCGATGCTCGGGAGCAACCTTACTTATCGTCAGATTCACCCGGAACATTAGCCTTTTc > 2:222999/1‑150 (MQ=255) tACAACCTGGTCACGCCGGGACTTCTTCACATCGTTCGCGGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCAAGGCCGGGCGTCGATGCTCGGGAGCAACCTTACTTATCGTCAGATTCACCCGGAACATTAGCCTTTTc > 2:2232654/1‑150 (MQ=255) aCAACCTGGTCACGCCGGGACTTCTTCACATCGTTCGCGGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCAAGGCCGGGCGTCGATGCTCGGGAGCAACCTTACTTATCGTCAGATTCACCCGGAACATTAGCCTTTTCg > 1:2094492/1‑150 (MQ=255) aaCCTGGTCACGCCGGAACTTCTTCACATCGTTCGCGAGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCAAGGCCGGGCGTCGATGCTCGGGAGCAACCTTACTTATCGTCAGATTCACCCGGAACATTAGCCTTTTCGcc > 1:1947847/1‑150 (MQ=255) aCCTGGTCACGCCGGGACTTCTTCACATCGTTCGCGGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCAAGGCCGGGCGTCGATGCTCGGGAGCAACCTTACTTATCGTCAGATTCACCCGGAACATTAGCCTTTTc > 1:79860/1‑146 (MQ=255) aCCTGGTCACGCCGGGACTTCTTCACATCGTTCGCGGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCAAGGCCGGGCGTCGATGCTCGGGAGCAACCTTACTTATCGTCAGATTCACCCGGAACATTAGCCTTTTc < 2:79860/146‑1 (MQ=255) ccTGGTCACGCCGGGACTTCTTCACATCGTTCGCGGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCAAGGCCGGGCGTCGATGCTCGGGAGCAACCTTACTTATCGTCAGATTCACCCGGAACATTAGCCTTTTCGCCGt < 2:2129525/150‑1 (MQ=255) tCACGCCGGGACTTCTTCACATCGTTCGCGGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCTTGGCCGGGCGttttc > 1:1477057/1‑83 (MQ=38) tCACGCCGGGACTTCTTCACATCGTTCGCGGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCTTGGCCGGGCGttttc < 2:1477057/87‑5 (MQ=38) tCACGCCGGGACTTCTTCACATCGTTCGCGGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCAAGGCCGGGCGTCGATGCTCGGGAGCAAc < 2:1649032/100‑1 (MQ=255) aCGCCGGGACTTCTTCACATCGTTCGCGGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCAAGGCCGTGCGTCGATGCTCGGGAGCAACCTTACTTATCGTCAGATTCACCCGGAACATTAGCCTTTTCGCCGTTGGCGAc < 1:1966432/150‑1 (MQ=255) ggggACTTCTTCACATCGTGCGCGGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCAAGGCCGGGCGTCGATGCTCGGGAGCAACCTTACTTATCGTCAGATTCACCCGGAACATTAGCCTTTTCGCCGTTGGCGAcagca < 2:545173/149‑1 (MQ=255) cGGGACTTCTTCACATCGTTCGCGGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCAAGGCCGGGCGTCGATGCTCGGGAGCAACCTTACTTATCGTCAGATTCACCCGGAACATTAGCCTTTTCGCCGTTGGCGAcagca > 2:789526/1‑150 (MQ=255) ggACTTCTTCACATCGTTCGCGGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCAAGGCCGGGc > 2:1300852/1‑73 (MQ=255) aCTTCTTCACATCGTTCGCGGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCAAGGCCGGGCGTCGATGCTCGGGAGCAACCTTACTTATCGTCAGATTCACCCGGAACATTAGCCTTTTCGCCGTTGGCGACAGCAGTGc < 2:2409574/150‑1 (MQ=255) aCTTCTTCACATCGTTCGCGGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCAAGGCCGGGCGTCGATGCTCGGGAGCAACCTTACTTATCGTCAGATTCACCCGGAACATTAGCCTTTTCGCCGTTGGCGACAGCAGTGc < 2:114175/150‑1 (MQ=255) cttcttCACATCGTTCGCGGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCAAGGCCGGGCGTCGATGCTCGGGAGCAACCTTACTTATCGTCAGATTCACCCGGAACATTAGCCTTTTCGCCGTTGGCGACAGCAGTGcc < 1:971997/150‑1 (MQ=255) ttcACATCGTTCGCGGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCAAGGCCGGGCGTCGATGCTCGGGAGCAACCTTACTTATCGTCAGATTCACCCGGAACATTAGCCTTTTCGCCGTTGGCGACAGCAGTGCCCTGc > 1:2287443/1‑150 (MQ=255) acaTCGTTCGCGGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCAAGGCCGGGCGTCGATGCTCGGGAGCAACCTTACTTATCGTCAGATTCACCCGGAACATTAGc > 2:1409574/1‑116 (MQ=255) acaTCGTTCGCGGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCAAGGCCGGGCGTCGATGCTCGGGAGCAACCTTACTTATCGTCAGATTCACCCGGAACATTAGc < 1:1409574/116‑1 (MQ=255) aTCGTTCGCGGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCAAGGCCGGGCGTCGATGCTCGGGAGCAACCTTACTTATCGTCAGATTCACCCGGAACATTAGCCTTTTCGCCGTTGGCGACAGCAGTGCCCTGCACTTc > 1:235008/1‑150 (MQ=255) tCGTTCGCGGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCAAGGCCGGGCGTCGATGCTCGGGAGCAACCTTACTTATCGTCAGATTCACCCGGAACATTAGCCTTTTCGCCGTTGGCGACAGCAGTg > 1:1012819/1‑138 (MQ=255) ttCGCGGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCAAGGCCGGGCGTCGATGCTCGGGAGCAACCTTACTTATCGTCAGATTCACCCGGAACATTAGCCTTTTCGCCGTTGGCGACAGCAGTGCCCTGCACTTCTGcc > 1:988017/1‑150 (MQ=255) ttCGCGGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCAAGGCCGGGCGTCGATGCTCGGGAGCAACCTTACTTATCGTCAGATTCACCCGGAACATTAGCCTTTTCGCCGTTGGCGACAGCAGTGCCCTGCACTTCTGcc < 2:2207645/150‑1 (MQ=255) ttCGCGGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCAAGGCCGGGCGTCGATGACCAGCAGCAACCTTACTTATCGTCAGATTCACCCGGAACATTAGCCTTTTCGCCGTTGGCGACAGCAGTGCCCTGCACTTCTGcc < 1:1354182/150‑1 (MQ=255) gcgGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCAAGGCCGGGCGTCGATGCTCGGGAGCAACCTTACTTATCGTCAGATTCACCCGGAACATTAGCCTTTTCGCCGTTGGCGACAGCAGTGCCCt > 1:2324964/1‑136 (MQ=255) gcgGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCAAGGCCGGGCGTCGATGCTCGGGAGCAACCTTACTTATCGTCAGATTCACCCGGAACATTAGCCTTTTCGCCGTTGGCGACAGCAGTGCCCt < 2:2324964/136‑1 (MQ=255) gctgccGGCTCTCGACCGCAAACGAAAACGCCCGGCCAAGGCCGGGCGTCGATGCCCGGGAGCAACCTTACTTATCGTCAGATTCACCCGGCACATTAGGCTTTTCGCCGTTGGCGACAGCAGTGCCCTGCACTTCTGCCATCATGCGCt > 1:349476/2‑150 (MQ=255) ctgccGGCTCTCGACCGCAAACGAAAACGCCCGGCCAAGGCCGGGCGTCGATGCTCGGGAGCAACCTTACTTATCGTCAGATTCACCCGGAACATTAGCCTTTTCGCCGTTGGCGACAGCAGTGCCCTGCACTTCTGCCCTCATGCGCtt > 1:1910838/1‑150 (MQ=255) gccGGCTCTCGACCGCAAACGAAAACGCCCGGCCAAGGCCGGGCGTCGATGCTCGGGAGCAACCTTACTTATCGTCAGATTCACCCGGAACATTAGCCTTTTCGCCGTTGGCGACAGCAGTGCCCTGCACTTCTGCCGTCATGCGCTTGa < 1:1851398/150‑1 (MQ=255) ccGGCTCTCGACCGCAAACGAAAACGCCCGGCCAAGGCCGGGCGTCGATGCTCGGGAGCAACCTTACTTATCGTCAGATTCACCCGGAACATTAGCCTTTTCGCCGTTGGCGACAGCAGTGCCCTGCACTTCTGCCGTCATGCGCTTGAg < 2:1947847/150‑1 (MQ=255) cGGCTCTCGACCGCAAACGAAAACGCCCGGCCAAGGCCGGGCGTCGATGCTCGGGAGCAACCTTACTTATCGTCAGATTCACCCGGAACATTAGCCTTTTCGCCGTTGGCGACAGCAGTGCCCTGCACTTCTGCCGTCATGCGCTTGAgg > 2:325746/1‑150 (MQ=255) ggCTCTCGACCGCAAACGAAAACGCCCGGCCAAGGCCGGGCGTCGATGCTCgg < 2:1848349/53‑1 (MQ=255) gACCGCAAACGAAAACGCCCGGCCAAGGCCGGGCGTCGATGCTCGGGAGCAACCTTACTTATCGTCAGATTCACCCGGAACATTAGCCTTTTCGCCGTTGGCGACAGCAGTGCCCTGCACTTCTGCCGTCATGCGCTTGAGGCCCAtgtg > 1:1617946/1‑150 (MQ=255) cGCAAACGAAAACGCCCGGCCAAGGCCGGGCGTCGATGCTCGGGAGCAACCTTACTTATCGTCAGATTCACCCGGAACATTAGCCTTTTCGCCGTTGGc > 2:1421991/1‑99 (MQ=255) cGCAAACGAAAACGCCCGGCCAAGGCCGGGCGTCGATGCTCGGGAGCAACCTTACTTATCGTCAGATTCACCCGGAACATTAGCCTTTTCGCCGTTGGc < 1:1421991/99‑1 (MQ=255) cGCAAACGAAAACGCCCGGCCAAGGCCGGGCGTCGATGCTCGGGAGCAACCTTACTTATCGTCAGATTCACCCGGAACATTAGCCTTTTCGCCGTTGGc < 1:1421233/99‑1 (MQ=255) cGCAAACGAAAACGCCCGGCCAAGGCCGGGCGTCGATGCTCGGGAGCAACCTTACTTATCGTCAGATTCACCCGGAACATTAGCCTTTTCGCCGTTGGCGACAGCAGTGCCCTGCACTTCTGCCGTCATGCGCTTGAGGCCCATGTGgcg < 1:1768689/150‑1 (MQ=255) cGCAAACGAAAACGCCCGGCCAAGGCCGGGCGTCGATGCTCGGGAGCAACCTTACTTATCGTCAGATTCACCCGGAACATTAGCCTTTTCGCCGTTGGCGACAGCAGTGCCCTGCACTTCTGCCGTCATGCGCTTGAGGCCCATGTGgcg < 2:1395249/150‑1 (MQ=255) gCAAACGAAAACGCCCGGCCAAGGCCGGGCGTCGATGCTCGGGAGCAACCTTACTTATCGTCAGATTCACCCGGAACATTAGCCTTTTCGCCGTTGGCGACAGCAGTGCCCTGCACTTCTGCCGTCATGCGCTTGAGGCCCATGTgg > 1:1012478/1‑147 (MQ=255) gCAAACGAAAACGCCCGGCCAAGGCCGGGCGTCGATGCTCGGGAGCAACCTTACTTATCGTCAGATTCACCCGGAACATTAGCCTTTTCGCCGTTGGCGACAGCAGTGCCCTGCACTTCTGCCGTCATGCGCTTGAGGCCCATGTgg < 2:1012478/147‑1 (MQ=255) aaaCGAAAACGCCCGGCCAAGGCCGGGCGTCGATGCTCGGGAGCAACCTTACTTATCGTCAGATTCACCCGGAACATTAGCCTTTTCGCCGTTGGCGACAGCAGTGCCCTGCACTTCTGCCGTCATGCGCTTGAGGCCCATGTGgc < 2:1348421/146‑1 (MQ=255) aaaCGAAAACGCCCGGCCAAGGCCGGGCGTCGATGCTCGGGAGCAACCTTACTTATCGTCAGATTCACCCGGAACATTAGCCTTTTCGCCGTTGGCGACAGCAGTGCCCTGCACTTCTGCCGTCATGCGCTTGAGGCCCATGTGgc > 1:1348421/1‑146 (MQ=255) gAAAACGCCCGGCCAAGGCCGGGCGTCGATGCTCGGGAGCAACCTTACTTATCGTCAGATTCACCCGGAACATTAGCCTTTTCGCCGTTGGCGACAGCAGTGCCCTGCACTTCTGCCGTCATGCGCTTGAGGCCCATGTGGCGCACGTCg < 1:2234982/150‑1 (MQ=255) gaCGCCCGGCCTTGGCCGGGCGTCGATGCTCGGGAGCAACCTTACTTATCGTCAGATTCACCCGGAACATTAGCCTTTTCGCCGTTGGCGACAGCAGTGCCCTGCACTTCTGCCGTCATGCGCTTGAGGCCCATGTGGCGCACGTCGGTg > 1:1664133/2‑150 (MQ=255) gCCCGGCCTTGGCCGGGCGTCGATGCTCGGGAGCAACCTTACTTATCGTCAGATTCACCCGGAACATTAGCCTTTTCGCCGTTGGCGACAGCAGTGCCCTTCACTTCTTCCTTCATCCGCTTGAGGCCCGTGGGAGGCCCGGCGGTgaca > 2:508177/1‑147 (MQ=255) gCCCGGCCAAGGCCGGGCGTCGATGCTCGGGAGCAACCTTACTTATCGTCAGATTCACCCGGAACATTAGCCTTTTCGCCGTTGGCGACAGCAGTGCCCTGCACTTCTGCCGTCATGCGCTTGAGGCCCATGTGGCGCACGTCGGTGCcg > 1:1582421/1‑150 (MQ=255) ccGGCCAAGGCCGGGCGTCGATGCTCGGGAGCAACCTTACTTATCGTCAGATTCACCCGGAACATTAGCCTTTTCGCCGTTGGCGACAGCAGTGCCCTGCACTTCTGc < 2:1239037/108‑1 (MQ=255) ccGGCCAAGGCCGGGCGTCGATGCTCGGGAGCAACCTTACTTATCGTCAGATTCACCCGGAACATTAGCCTTTTCGCCGTTGGCGACAGCAGTGCCCTGCACTTCTGc > 1:1239037/1‑108 (MQ=255) cAAGGCCGGGCGTCGATGCTCGGGAGCAACCTTACTTATCGTCAGATTCACCCGGAACATTAGCCTTTTCGCCGTTGGCGACAGCAGTGCCCTGCACTTCTGCCGTCATGCGCTTGAGGCCCATGTGGCGCACGTCGGTGCCGCGCACCa < 2:1357162/150‑1 (MQ=255) | CATTCACTTTACTCATCGATACTCCTTTTGAATCCCGACTAGCCTACTGCCAATGATGGCCACTTGCTACAACCTGGTCACGCCGGGACTTCTTCACATCGTTCGCGGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCAAGGCCGGGCGTCGATGCTCGGGAGCAACCTTACTTATCGTCAGATTCACCCGGAACATTAGCCTTTTCGCCGTTGGCGACAGCAGTGCCCTGCACTTCTGCCGTCATGCGCTTGAGGCCCATGTGGCGCACGTCGGTGCCGCGCACCA > NC_002947/6070685‑6070981 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |