Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 6,078,477 G→T 5.3% L269M (CTG→ATG) ‡ PP_5330 ← MFS transporter

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029476,078,4770GT 5.3% 246.3 / 2.5 76L269M (CTG→ATG) ‡PP_5330MFS transporter
Reads supporting (aligned to +/- strand):  ref base G (35/37);  new base T (2/2);  total (37/39)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.25e-01

GAACACCCGGCCCGCACCATAGCGGTCGGCCAGGCTGCCGGCACCAATACAGCCGAAGCTGAGCAACACGATGGCCAGGCTGTTGGCCTTGAGCGAGTCGGTCGGGCTGATGTGGTAGATGCTCTGCAACAGCGCCGGGGTCATCAGGATGACCACTACAATGCCGGCCGAAAGCATCCAGGTCAGCAGCATCGACAGGATGATCGGACCACGGTGGTCACGCAGCACGGCGCGCAGTGGCAACTCCTCGGCCAGTGCCTTGCGTTGCTGCATTTCGGCGAACACCGGGGTTT  >  NC_002947/6078331‑6078623
                                                                                                                                                  |                                                                                                                                                  
gAACACCCGGCCCGCACCATAGCGGTCGGCCAGGCTGCCGGCACCAATACAGCCGAAGCTGAGCAACACGATGGCCAGGCTGTTGGCCTTGAGCGAGTCGGTCGGGCTGATGTGGTAGATGCTCTGCAACAGCGCCGGGGTCATCAGGAt                                                                                                                                                 <  1:2022548/150‑1 (MQ=255)
gAACACCCGGCCCGCACCATAGCGGTCGGCCAGGCTGCCGGCACCAATACAGCCGAAGCTGAGCAACACGATGGCCAGGCTGTTGGCCTTGAGCGAGTCGGTCGGGCTGATGTGGTAGATGCTCTGCAACAGCGCCGGGGTCATCAGGAt                                                                                                                                                 <  1:1899074/150‑1 (MQ=255)
   cacCCGGCCCGCACCATAGCGGTCGGCCAGGCTGCCGGCACCAATACAGCCGAAGCTGAGCAACACGATGGCCAGGCTGTTGGCCTTGAGCGAGTCGGTCGGGCTGATGTGGTAGATGCTCTGCAACAGCGCCGGGGTCATCAGGATGAc                                                                                                                                              >  2:778789/1‑150 (MQ=255)
   cacCCGGCCCGCACCATAGCGGTCGGCCAGGCTGCCGGCACCAATACAGCCGAAGCTGAGCAACACGATGGCCAGGCTGTTGGCCTTGAGCGAGTCGGTCGGGCTGATGTGGTAGATGCTCTGCAACAGCGCCGGGGTCATCAGGATGAc                                                                                                                                              <  1:1483315/150‑1 (MQ=255)
      ccGGCCCGCACCATAGCGGTCGGCCAGGCTGCCGGCACCAATACAGCCGAAGCTGAGCAACACGATGGCCAGGCTGTTGGCCTTGAGCGAGTCGGTCGGGCTGATGTGGTAGATGCTCTGCAACAGCGCCGGGGTCATCCTGATGAcccc                                                                                                                                           <  1:1431641/150‑3 (MQ=255)
      ccGGCCCGCACCATAGCGGTCGGCCAGGCTGCCGGCACCAATACAGCCGAAGCTGAGCAACACGATGGCCAGGCTGTTGGCCTTGAGCGAGACGGTCGGGCTGATGTGGTAGATGCTCTGCAACAGCGCCGGGGGCATCAGGATGACCAc                                                                                                                                           >  2:2040318/1‑150 (MQ=255)
        ggCCCGCACCATAGCGGTCGGCCAGGCTGCCGGCACCAATACAGCCGAAGCTGAGCAACACGATGGCCAGGCTGTTGGCCTTGAGCGAGTCGGTCGGGCTGATGTGGTAGATGCTCTGCAACAGCGCCGGGGTCATCAGGATGACCACTa                                                                                                                                         <  1:225468/150‑1 (MQ=255)
           ccGCACCATAGCGGTCGGCCAGGCTGCCGGCACCAATACAGCCGAAGCTGAGCAACACGATGGCCAGGCTGTTGGCCTTGAGCGAGTCGGTCGGGCTGATGTGGTAGATGCTCTGCAACAGCGCCGGGGTCATCAGGATGACCACTACaa                                                                                                                                      <  1:413915/150‑1 (MQ=255)
            cGCACCATAGCGGTCGGCCAGGCTGCCGGCACCAATACAGCCGAAGCTGAGCAACACGGTGGCCAGGCTGTTGGCCTTGAGCGAGTCGGTCGGGCTGATGTGGTAGATGCTCTGCAACAGCGCCGGGGTCATCAGGATGACCACTACAAt                                                                                                                                     >  2:924490/1‑150 (MQ=255)
               aCCATAGCGGTCGGCCAGGCTGCCGGCACCAATACAGCCGAAGCTGAGCAACACGATGGCCAGGCTGTTGGCCTTGAGCGAGTCGGTCGGGCTGATGTGGTAGATGCTCTGCAACAGCGCCGGGGTCATCAGGATGACCACTACAATgcc                                                                                                                                  <  2:2098608/150‑1 (MQ=255)
                ccATAGCGGTCGGCCAGGCTGCCGGCACCAATACAGCCGAAGCTGAGCAACACGATGGCCAGGCTGTTGGCCTTGAGCGAGTCGGTCGGGCTGATGTGGTAGATGCTCTGCAACAGCGCCGGGGTCATCAGGATGACCACTACAATgccg                                                                                                                                 <  1:1239977/150‑1 (MQ=255)
                ccATAGCGGTCGGCCAGGCTGCCGGCACCAATACAGCCGAAGCTGAGCAACACGATGGCCAGGCTGTTGGCCTTGAGCGAGTCGGTCGGGCTGATGTGGTAGATGCTCTGCAACAGCGCCGGGGTCATCAGGATGACCACTACAATgccg                                                                                                                                 <  1:368416/150‑1 (MQ=255)
                       ggTCGGCCAGGCTGCCGGCACCAATACAGCCGAAGCTGAGCAACACGATGGCCAGGCTGTTGGCCTTGAGCGAGTCGGTCGGGCTGATGTGGTAGATGCTCTGCAACAGCGCCGGGGTCATCAGGATGACCACTACAATGCCGGCCGaaa                                                                                                                          <  2:1472485/150‑1 (MQ=255)
                       ggTCGGCCAGGCTGCCGGCACCAATACAGCCGAAGCTGAGCAACACGATGGCCAGGCTGTTGGCCTTGAGCGAGTCGGTCGGGCTGATGTGGTAGATGCTCTGCAACAGCGCCGGGGTCATCAGGATGACCACTACAATGCCGGCCGaaa                                                                                                                          <  1:1662071/150‑1 (MQ=255)
                          cGGCCAGGCTGCCGGCACCAATACAGCCGAAGCTGAGCAACACGATGGCCAGGCTGTTGGCCTTGAGCGAGTCGGTCGGGCTGATGTGGTAGATGCTCTGCAACAGCGCCGGGGTCATCAGGATGACCACTACAATGCCGGCCGAAAGCa                                                                                                                       <  1:1721249/150‑1 (MQ=255)
                            gCCAGGCTGCCGGCACCAATACAGCCGAAGCTGAGCAACACGATGGCCAGGCTGTTGGCCTTGAGCGAGTCGGTCGGGCTGATGTGGTAGATGCTCTGCAACAGCGCCGGGGTCATCAGGATGACCACTACAATGCCGGCCGAAAGCATc                                                                                                                     <  1:3627/150‑1 (MQ=255)
                                 gCTGCCGGCACCAATACAGCCGAAGCTGAGCAACACGATGGCCAGGCTGTTGGCCTTGAGCGAGTCGGTCGGGCTGATGTGGTAGATGCTCTGCAACAGCGCCGGGGTCATCAGGATGACCACTACAATGCCGGCCGAAAGCATCCAGGt                                                                                                                >  2:2107830/1‑150 (MQ=255)
                                  cTGCCGGCACCAATACAGCCGAAGCTGAGCAACACGAGGGCCAGGCTGTTGGCCTTGAGCGAGTCGGTCGGGCTGATGTGGTAGATGCTCTGCAACAGCGCCGGGGTCATCAGGATGACCACTACAATGCCGGCCGAAAGCATCCAGGTc                                                                                                               >  1:1950025/1‑150 (MQ=255)
                                            cAATACAGCCGAAGCTGAGCAACACGATGGCCAGGCTGTTGGCCTTGAGCGAGTCGGTCGGGCTGATGTGGTAGATGCTCTGCAACAGCGCCGGGGTCATCAGGATGACCACTACAATGCCGGCCGAAAGCATCCAGGTCAGCAGCATcc                                                                                                     >  2:11678/1‑149 (MQ=255)
                                              aTACAGCCGAAGCTGAGCAACACGATGGCCAGGCTGTTGGCCTTGAGCGAGTCGGTCGGGCTGATGTGGTAGATGCTCTGCAACAGCGCCGGGGTCATCAGGATGACCACTACAATGCCGGCCGAAAGCATCCAGGTCAGCAGCATCGAc                                                                                                   <  2:513984/150‑1 (MQ=255)
                                               tACAGCCGAAGCTGAGCAACACGATGGCCAGGCTGTTGGCCTTGAGCGAGTCGGTCGGGCTGATGTGGTAGATGCTCTGCAACAGCGCCGGGGTCATCAGGATGACCACTACAATGCCGGCCGAAAGCATCCAGGTCAGCAGCATCGACa                                                                                                  >  1:1079551/1‑150 (MQ=255)
                                                  aGCCGAAGCTGAGCAACACGATGGCCAGGCTGTTGGCCTTGAGCGAGTCGGTCGGGCTGATGTGGTAGATGCTCTGCAACAGCGCCGGGGTCATCCTGATGAccccg                                                                                                                                          >  2:2399562/1‑104 (MQ=255)
                                                  aGCCGAAGCTGAGCAACACGATGGCCAGGCTGTTGGCCTTGAGCGAGTCGGTCGGGCTGATGTGGTAGATGCTCTGCAACAGCGCCGGGGTCATCCTGATGAccccg                                                                                                                                          <  1:2399562/107‑4 (MQ=255)
                                                     cGAAGCTGAGCAACACGATGGCCAGGCTGTTGGCCTTGAGCGAGTCGGTCGGGCTGATGTGGTAGATGCTCTGCAACAGCGCCGGGGTCATCAGGAt                                                                                                                                                 >  1:1847651/1‑97 (MQ=255)
                                                     cGAAGCTGAGCAACACGATGGCCAGGCTGTTGGCCTTGAGCGAGTCGGTCGGGCTGATGTGGTAGATGCTCTGCAACAGCGCCGGGGTCATCAGGAt                                                                                                                                                 <  2:1847651/97‑1 (MQ=255)
                                                     cGAAGCTGAGCAACACGATGGCCAGGCTGTTGGCCTTGAGCGAGTCGGTCGGGCTGATGTGGTAGATGCTCTGCAACAGCGCCGGGGTCATCAGGATGACCACTACAATGCCGGCCGAAAGCATCCAGGTCAGCAGCATCGACAGgatga                                                                                            >  2:1695599/1‑150 (MQ=255)
                                                       aaGCTGAGCAACACGATGGCCAGGCTGTTGGCCTTGAGCGAGTCGGTCGGGCTGATGTGGTAGATGCTCTGCAACAGCGCCGGGGTCATCAGGATGACCACTACAATGCCGGCCGAAAGCATCCAGGTCAGCAGCATCGACAGGATGATc                                                                                          <  1:778789/150‑1 (MQ=255)
                                                        aGCTGAGCAACACGATGGCCAGGCTGTTGGCCTTGAGCGAGTCGGTCGGGCTGATGTGGTAGATGCTCTGCAACAGCGCCGGGGTCATCAGGATGACCACTACAATGCCGGCCGAAAGCATCCAGGTCAGCAGCATCGACAGGATGATCg                                                                                         <  2:697973/150‑1 (MQ=255)
                                                                  cacGATGGCCAGGCTGTTGGCCTTGAGCGAGTCGGTCGGGCTGATGTGGTAGATGCTCTGCAACAGCGCCGGGGTCATCAGGATGACCACTACAATGCCGGCCGAAAGCATCCAGGTCAGCAGCATCGACAGGATGATCGGACCACggtg                                                                               <  1:270154/150‑1 (MQ=255)
                                                                  cacGATGGCCAGGCTGTTGGCCTTGAGCGAGTCGATCGGGCTGATGTGGTAGATGCTCTGCAACAGCGCCGGGGTCATCAGGATGACCACTACAATGCCGGCCCAAAGCATCCAGGTAAGCACCATAGACAGGATAAGCGGACTACgttt                                                                               <  2:150407/150‑4 (MQ=255)
                                                                  cacGATGGCCAGGCTGTTGGCATTGGGAGAGTCGGTCGGGCAGATGTGGTAGATGCTCTGCAACAGCGCCGGGGTCATCAGGATGACCACTACAATGCCGGCCGAAAGCATCCAGGTCAGCAGCATCGACAGGATGATCGGACCACggtg                                                                               <  2:633225/150‑1 (MQ=255)
                                                                     gATGGCCAGGCTGTTGGCCTTGAGCGAGTCGGTCGGGCTGATGTGGTATATGCTCTGCAACAGCGCCGGGGTCATCAGGATGACCACTACAATGCCGGCCGAAAGCATCCAGGTCAGCAGCATCGACAGGATGATCGGACCACGGTGGTc                                                                            >  2:2144197/1‑150 (MQ=255)
                                                                     gATGGCCAGGCTGTTGGCCTTGAGCGAGTCGGTCGGGCTGATGTGGTAGATGCTCTGCAACAGCGCCGGGGTCATCAGGATGACCACTACAATGCCGGCCGAAAGCATCCAGGTCAGCAGCATCGACAGGATGATCGGACCACGGTGGTc                                                                            <  1:1482726/150‑1 (MQ=255)
                                                                      aTGGCCAGGCTGTTGGCCTTGAGCGAGTCGGTCGGGCTGATGTGGTAGATGCTCTGCAACAGCGCCGGGGTCATCAGGATGACCACTACAATGCCGGCCGAAAGCATCCAGGTCCGCAGCATCGACAGGATGATCGGACCACGGTGGTCa                                                                           <  2:1955463/150‑1 (MQ=255)
                                                                          ccAGGCTGTTGGCCTTGAGCGAGTCGGTCGGGCTGATGTGGTAGATGCTCTGCAACAGCGCCGGGGTCATCAGGATGACCACTACAATGCCGGCCGAAAGCATCCAGGTCAGCAGCATTGACAGCATGCTCGGACCACGGTGGTCACgca                                                                       <  1:1632318/150‑1 (MQ=255)
                                                                          ccAGGCTGTTGGCCTTGAGCGAGTCGGTCGGGCTGATGTGGTAGATGCTCTGCAACAGCGCCGGGGTCATCAGGATGACCACTACAATGCCGGCCGAAAGCATCCAGGTCAGCAGCATCGACAGGATGATCGGACCACGGTGGTCACgca                                                                       <  1:924490/150‑1 (MQ=255)
                                                                           cAGGCTGTTGGCCTTGAGCGAGTCGGTCGGGCTGATGTGGTAGATGCTCTGCAACAGCGCCGGGGTCATCAGGATGACCACTACAATGCCGGCCGAAAGCATCCAGGTCAGCAGCATCGACAGGATGATCGGACCACGGTGGTCACgcag                                                                      >  1:166275/1‑150 (MQ=255)
                                                                            aGGCTGTTGGCCTTGAGCGAGTCGGTCGGGCTGATGTGGTAGATGCTCTGCAACAGCGCCGGGGTCATCAGGATGACCACTACAATGCCGGCCGAAAGCATCCAGGTCAGCAGCATCGACAGGATGATCGGACCACggtg                                                                               >  1:105656/1‑140 (MQ=255)
                                                                            aGGCTGTTGGCCTTGAGCGAGTCGGTCGGGCTGATGTGGTAGATGCTCTGCAACAGCGCCGGGGTCATCAGGATGACCACTACAATGCCGGCCGAAAGCATCCAGGTCAGCAGCATCGACAGGATGATCGGACCACggtg                                                                               <  2:105656/140‑1 (MQ=255)
                                                                                  ttGGCCTTGAGCGAGTCGGTCGGGCTGATGTGGTAGATGCTCTGCAACAGCGCCGGGGTCATCAGGATGACCACTACAATGCCGGCCGAAAGCATCCAGGTCAGCAGCATCGACAGGATGATCGGACCACGGTGGTCTCGCAGCACGgcg                                                               >  2:2283450/1‑150 (MQ=255)
                                                                                  ttGGCCTTGAGCGAGTCGGTCGGGCTGATGTGGTAGATGCTCTGCAACAGCGCCGGGGTCATCAGGATGACCACTACAATGCCGGCCGAAAGCATCCAGGTCAGCAGCATCGACAGGATGATCGGACCACGGTGGTCACGCAGCACGgcg                                                               >  2:444257/1‑150 (MQ=255)
                                                                                     gCCTTGAGCGAGTCGGTCGGGCTGATGTGGTAGATGCTCTGCAACAGCGCCGGGGTCATCAGGATGACCACTACAATGCCGGCCGAAAGCATCCAGGTCAGCAGCATCGACAGGATGATCGGACCACGGTGGTCACGCAGCACGgcgcgc                                                            <  1:444257/150‑1 (MQ=255)
                                                                                      ccTTGAGCGAGTCGGTCGGGCTGATGTGGTAGATGCTCTGCAACAGCGCCGGGGTCATCAGGATGACCACTACAATgccgg                                                                                                                                <  2:685766/81‑1 (MQ=255)
                                                                                      ccTTGAGCGAGTCGGTCGGGCTGATGTGGTAGATGCTCTGCAACAGCGCCGGGGTCATCAGGATGACCACTACAATgccgg                                                                                                                                >  1:685766/1‑81 (MQ=255)
                                                                                       cTTGAGCGAGTCGGTCGGGCTGATGTGGTAGATGCTCTGCAACAGCGCCGGGGTCATCAGGATGACCACTACAATGCCGGCCGaaa                                                                                                                          <  1:554170/86‑1 (MQ=255)
                                                                                       cTTGAGCGAGTCGGTCGGGCTGATGTGGTAGATGCTCTGCAACAGCGCCGGGGTCATCAGGATGACCACTACAATGCCGGCCGaaa                                                                                                                          >  2:554170/1‑86 (MQ=255)
                                                                                        ttGAGCGAGTCGGTCGGGCTGATGTGGTAGATGCTCTGCAACAGCGCCGGGGTCATCAGGATGACGACTACAATGCCGGCCGAAAGCATCCAGGTCAGCAGCATCGACAGGATGATCGGACCACGGAGGTCACGCAGCACGGCGCGCAGt                                                         >  1:595960/1‑150 (MQ=255)
                                                                                            gCGAGTCGGTCGGGCTGATGTGGTAGATGCTCTGCAACAGCGCCGGGGTCATCAGGATGACCACTACAATGCCGGCCGAAAGCATCCAGGTCAGCAGCATCGACAGGATGATCGGACCACGGTGGTCACGCAGCACGGCGCGCAGTGGCa                                                     >  2:2232254/1‑150 (MQ=255)
                                                                                                gtcggtcgGGCTGATGTGGTAGATGCTCTGCAACAGCGCCGGGGTCATCAGGATGACCACTACAATGCCGGCCGAAAGCATCCAGGTCAGCAGCATCGACAGGATGATCGGACCACGGTGGTCACGCAGCACGGCGCGCAGTGGCAActc                                                 >  1:167288/1‑150 (MQ=255)
                                                                                                   ggtcggGCTGATGTGGTAGATGCTCTGCAACAGCGCCGGGGTCATCAGGATGACCACTACAATGCCGGCCGAAAGCATCCAGGTCAGCAGCATCGACAGGATGATCGGACCACGGTGGTCTCGCAGCACGGCGCGCAGTGGCAActcctc                                              <  1:2283450/150‑1 (MQ=255)
                                                                                                   ggtcggGCTGATGTGGTAGATGCTCTGCAACAGCGCCGGGGTCATCAGGATGACCACTACAATGCCGGCCGAAAGCATCCAGGTCAGCAGCATCGACAGGATGATCGGACCACGGTGGTCACGCAGCACGGCGCGCAGTGGCAActcctc                                              <  1:2258424/150‑1 (MQ=255)
                                                                                                        ggCTGATGTGGTAGATGCTCTGCAACAGCGCCGGGGTCATCAGGATGACCACTACAATGCCGGCCGAAAGCATCCAGGTCAGCAGCATCGACAGGATGATCGGACCACGGTGGTCACGCAGCACGGCGCGCAGTGGCAACTCCTCGGCCa                                         >  1:1528084/1‑150 (MQ=255)
                                                                                                              tgtgGTAGATGCTCTGCAACAGCGCCGGGGTCATCAGGATGACCACTACAATGCCGGCCGAAAGCATCCAGGTCAGCAGCATCGACAGGATGATCGGACCACggtg                                                                               >  1:1698608/1‑106 (MQ=255)
                                                                                                              tgtgGTAGATGCTCTGCAACAGCGCCGGGGTCATCAGGATGACCACTACAATGCCGGCCGAAAGCATCCAGGTCAGCAGCATCGACAGGATGATCGGACCACggtg                                                                               <  2:1698608/106‑1 (MQ=255)
                                                                                                                  gTAGATGCTCTGCAACAGCGCCGGGGTCATCAGGATGACCACTACAATGCCGGCCGAAAGCATCCAGGTCAGCAGCATCGACAGGATGATCGGACCACGGTGGTCACGCAGCACGGCGCGCAGTGGCAACTCCTCGGCCAGTGCCTTGCg                               >  1:1572366/1‑150 (MQ=255)
                                                                                                                       tGCTCTGCAACAGCGCCGGGGTCATCAGGATGACCACTACAATGCCGGCCGAAAGCATCCAGGTCAGCAGCATCGACAGGATGATCGGACCACGGTGGTCACGCAGCACGGCGCGCAGTGGCAACTCCTCGGCCAGTGCCTTGCGTtgct                          <  1:1648910/150‑1 (MQ=255)
                                                                                                                        gCTCTGCAACAGCGCCGGGGTCATCAGGATGACCACTACAATGCCGGCCGAAAGCATCCAGGTCAGCAGCATCGACAGGATGATCGGACCACGGTGGTCACGCAGCACGGCGCGCAGTGGCAACTCCTCGGCCAGTGCCTTGCGTtgctg                         <  2:166275/150‑1 (MQ=255)
                                                                                                                        gCTCTGCAACAGCGCCGGGGTCATCAGGATGACCACTACAATGCCGGCCGAAAGCATCCAGGTCAGCAGCATCGACAGGATGATCGGACCACGGTGGTCACGCAGCACGGCGAGCAGTGGCAACTCCTCGGCCAGTGGCTTGCGTtgctg                         >  1:1070649/1‑150 (MQ=255)
                                                                                                                          tctGCAACAGCGCCGGGGTCATCAGGATGACCACTACAATGCCGGCCGAAAGCATCCAGGTCAGCAGCATCGACAGGATGATCGGACCACGGTGGTCACGCAGCACGGCGCGCAGTGGCAACTCCTCGGCCAGTGCCTTGCGTTGCTGCa                       >  2:1652920/1‑150 (MQ=255)
                                                                                                                            tGCAACAGCGCCGGGGTCATCAGGATGACCACTACAATGCCGGCCGAAAGCATCCAGGTCAGCAGCATCGACAGGATGATCGGACCACGGTGGTCACGCAGCACGGCGCGCAGTGGCAACTCCTCGGCCAGTGCCTTGCGTTGCTGCAtt                     >  1:1570180/1‑150 (MQ=255)
                                                                                                                             gCAACAGCGCCGGGGTCATCAGGATGACCACTACAATGCCGGCCGAAAGCATCCAGGTCAGCAGCATCGACAGGATGATCGGACCACGGTGGTCACGCAGCACGGCGCGCAGTGGCAACTCCTCGGCCAGTGCCTTGCGTTGCTGCAttt                    >  2:1599184/1‑150 (MQ=255)
                                                                                                                               aaCAGCGCCGGGGTCATCAGGATGACCACTACAATGCCGGCCGAAAGCATCCAGGTCAGCAGCATCGACAGGATGATCGGACCACGGTGGTCACGCAGCACGGCGCGCAGTGGCAACTCCTCGGCCAGTGCCTTGCGTTGCTGCATTTCg                  >  2:1782909/1‑150 (MQ=255)
                                                                                                                               aaCAGCGCCGGGGTCATCAGGATGACCACTACAATGCCGGCCGAAAGCATCCAGGTCAGCAGCATCGACAGGATGATCGGACCACGGTGGTCACGCAGCACGGCGCGCAGTGGCAACTCCTCGGCCAGTGCCTTGCGTTGCTGCATTTCg                  >  2:2305016/1‑150 (MQ=255)
                                                                                                                                 cAGCGCCGGGGTCATCAGGATGACCACTACAATGCCGGCCGAAAGCATCCAGGTCAGCAGCATCGACAGGATGATCGGACCACGGTGGTCACGCAGCACGGCGCGCAGTGGCAACTCCTCGGCCAGTGCCTTGCGTTGCTGCATTTCGGc                <  2:1950025/150‑1 (MQ=255)
                                                                                                                                  aGCGCCGGGGTCATCAGGATGACCACTACAATGCCGGCCGAAAGCATCCAGGTCAGCAGCATCGACAGGATGATCGGACCACGGTGGTCACGCAGCACGGCGCGCAGTGGCAACTCCTCGGCCAGTGCCTTGCGTTGCTGCATTTCGGCg               >  2:384094/1‑150 (MQ=255)
                                                                                                                                   gcgcCGGGGTCATCAGGATGACCACTACAATGCCGGCCGAAAGCATCCAGGTCAGCAGCATCGACAGGATGATCGGACCACGGTGGTCACGCAGCACGGCGCGCAGTGGCAACTCCTCGGCCAGTGCCTTGc                                <  1:1904205/132‑1 (MQ=255)
                                                                                                                                   gcgcCGGGGTCATCAGGATGACCACTACAATGCCGGCCGAAAGCATCCAGGTCAGCAGCATCGACAGGATGATCGGACCACGGTGGTCACGCAGCACGGCGCGCAGTGGCAACTCCTCGGCCAGTGCCTTGc                                >  2:1904205/1‑132 (MQ=255)
                                                                                                                                     gtagtggTCATCCTGATGACCACTACAATGCCGGCCGAAAGCATCCAGGTCAGCAGCATCGACAGGATGATCGGACCACGGTGGTCACGCAGCACGGCGCGCAGTGGCAACTCCTCGGCCAGTGCCTTGCGTTGCTGCATTTCGGCGAac            >  1:1803864/6‑150 (MQ=255)
                                                                                                                                      ccGGGGTCATCAGGATGACCACTACAATGCCGGCCGAAAGCATCCAGGTCAGCAGCATCGACAGGATGATCGGACCACGGTGGTCACGCAGCACGGCGCGCAGTGGCAActc                                                 <  1:1190482/112‑1 (MQ=255)
                                                                                                                                      ccGGGGTCATCAGGATGACCACTACAATGCCGGCCGAAAGCATCCAGGGCAGCAGCATCGACAGGATGATCGGACCACGGTGGTCACGCAGCACGGCGCGCAGTGGCAActc                                                 >  2:1190482/1‑112 (MQ=255)
                                                                                                                                         gggTCATCAGGATGACCACTACAATGCCGGCCGAAAGCATCCAGGTCAGCAGCATCGACAGGATGAGTTCAGCACGGTGGTCACGCAGCACGGCGCGCAGTGGCAACTCCTCGGCCAGTGCCTTGCGTTGCTGCATTTCGGCGAACACCg        <  1:1956326/150‑1 (MQ=255)
                                                                                                                                             catcaGGATGACCACTACAATGCCGGCCGAAAGCATCCAGGTCAGCAGCATCGACAGGATGATCGGACCACGGTGGTCACGCAGCACGGCGCGCAGTGGCAACTCCTCGGCCAGTGCCTTGCGTTGCTGCATTTCGGCGAACACCGGGGt    <  1:1537387/150‑1 (MQ=255)
                                                                                                                                               tcaGGATGACCACTACAATGCCGGCCGAAAGCATCCAGGTCAGCAGCATCGACAGGATGATCGGACCACGGTGGTCACGCAGCACGGCGCGCAGTGGCAACTCCTCGGCCAGTGCCTTGCGTTGCTGCATTTCGGCGAACACGGGGGttt  >  1:780279/1‑150 (MQ=255)
                                                                                                                                               tcaGGATGACCACTACAATGCCGGCCGAAAGCATCCAGGTCAGCAGCATCGACAGGATGATCGGACCACGGTGGTCACGCAGCACGGCGCGCAGTGGCAACTCCTCGGCCAGTGCCTTGCGTTGCTGCATTTCGGCGAACACCGGGGttt  >  2:1295575/1‑150 (MQ=255)
                                                                                                                                               tcaGGATGACCACTACAATGCCGGCCGAAAGCATCCAGGTCAGCAGCATCGACAGGATGATCGGACCACGGTGGTCACGCAGCACGGCGCGCAGTGGCAACTCCTCGGCCAGTGCCTTGCGTTGCTGCATTTCGGCGAACACCGGGGttt  >  1:204446/1‑150 (MQ=255)
                                                                                                                                               tcaGGATGACCACTACAATGCCGGCCGAAAGCATCCAGGTCAGCAGCATCGACAGGATGATCGGACCACGGTGGTCACGCAGCACGGCGCGCAGTGGCAACTCCTCGGCCAGTGCCTTGCGTTGCTGCATTTCGGCGAACACCGGGGttt  >  1:128219/1‑150 (MQ=255)
                                                                                                                                                  |                                                                                                                                                  
GAACACCCGGCCCGCACCATAGCGGTCGGCCAGGCTGCCGGCACCAATACAGCCGAAGCTGAGCAACACGATGGCCAGGCTGTTGGCCTTGAGCGAGTCGGTCGGGCTGATGTGGTAGATGCTCTGCAACAGCGCCGGGGTCATCAGGATGACCACTACAATGCCGGCCGAAAGCATCCAGGTCAGCAGCATCGACAGGATGATCGGACCACGGTGGTCACGCAGCACGGCGCGCAGTGGCAACTCCTCGGCCAGTGCCTTGCGTTGCTGCATTTCGGCGAACACCGGGGTTT  >  NC_002947/6078331‑6078623

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑