| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 6,132,191 | C→G | 5.2% | G573A (GGC→GCC) | copA‑II ← | copper resistance protein A |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 6,132,191 | 0 | C | G | 5.2% | 282.1 / 3.9 | 91 | G573A (GGC→GCC) | copA‑II | copper resistance protein A |
| Reads supporting (aligned to +/- strand): ref base C (44/40); new base G (2/3); total (47/44) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.70e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CCATGAAATTACCGTCCTCATCCTCCAGATCGCTCCACATTCCGTGGAGGTGGATGGGGTGAGTCATCATGGTGTCGTTGACCAAAGTGATTCGCAGACGCTCGCCATATTTGAGGCGTAGGGGTTCAGCATCGGAAAATTTGACGCCGTCAAATGACCAGGCGAACTTCTCCATATGGCCTGTGAGATGCAGCTCGATGGTGCGCCCTGGTTCACGTCCATCTGGATCAATGAACGTGCTTCGCAGATCCGCATAGGTCAGGACACGACGTCCATTGTTGCGCAAGCCGAT > NC_002947/6132045‑6132336 | ccATGAAATTACCGTCCTCATCCTCCAGATCGCTCCACATTCCGTGGAGGTGGATGGGGTGAGTCATCATGGTGTCGTTGACCAAAGTGATTCGCAGACGCTCGCCATATTTGAGGCGTAGGGGTTCAGCATCGGAAAATTTGACGCCGt > 1:1404352/1‑150 (MQ=255) cATGAAATTACCGTCCTCATCCTCCAGATCGCTCCACATTCCGTGGAGGTGGATGGGGTGAGTCATCATGGTGTCGTTGACCAAAGTGATTCGCAGACGCTCGCCATATTTGAGGCGTAGGGGTTCAGCATCGGAAAATTTGACGCCGTc < 1:100316/150‑1 (MQ=255) aTGAAATTACCGTCCTCATCCTCCAGATCGCTCCACATTCCGTGGAGGTGGCTGGGGTGAGTCATCATGGTGTCGTTGACCAAAGTGATTCGCAGACGCTCGCCATATTTGAGGCGTAGGGGTTCAGCATCGGAAAATTTGACGCCGTCa > 1:725882/1‑150 (MQ=255) aTGAAATTACCGTCCTCATCCTCCAGATCGCTCCACATTCCGTGGAGGTGGATGGGGTGAGTCATCATGGTGTCGTTGACCAAAGTGATTCGCAGACGCTCGCCATATTTGAGGCGTAGGGGTTCAGCATCGGAAAATTTGACGCCGTCa > 1:2036756/1‑150 (MQ=255) aTGAAATTACCGTCCTCATCCTCCAGATCGCTCCACATTCCGTGGAGGAGGGTAGGGTGAGTCATCATGGTGTCGTTGACCAAAGTGATTCGCAGACGCTCGCCATATTTGAGGCGTAGGGGTTCAGCATCGGAAAATTTGACGCCGTCa > 1:1043995/1‑150 (MQ=255) tGAAATTACCGTCCTCATCCTCCAGATCGCTCCACATTCCGTGGAGGTGGATGGGGTGAGTCATCATGGTGTCGTTGACCAAAGTGATTCGCAGACGCTCGCCATATTTGAGGCGTAGGGGTTCAGCATCGGAAAATTTGACGCCGTCaa > 2:1034191/1‑150 (MQ=255) tGAAATTACCGTCCTCATCCTCCAGATCGCTCCACATTCCGTGGAGGTGGATGGGGTGAGTCATCATGGTGTCGTTGACCAAAGTGATTCGCAGACGCTCGCCATATTTGAGGCGTAGGGGTTCAGCATCGGAAAATTTGACGCCGTCaa > 1:1857829/1‑150 (MQ=255) aaTTACCGTCCTCATCCTCCAGATCGCTCCACATTCCGTGGAGGTGGATGGGGTGAGTCATCATGGTGTCGTTGACCAAAGTGATTCGCAGACGCTCGCCATATTTGAGGCGTAGGGGTTCAGCATCGGAAAATTTGACGGCGTCAAAtt < 1:1401215/150‑2 (MQ=255) ttACCGTCCTCATCCTCCAGATCGCTCCACATTCCGTGGAGGTGGATGGGGTGAGTCATCATGGTGTCGTTGACCAAAGTGATTCGCAGACGCTCGCCATATTTGAGGCGTAGGGGTTCAGCATCGGAAAATTTGACGCCGTCAAATGAc < 1:1798175/150‑1 (MQ=255) ccGTCCTCATCCTCCAGATCGCTCCACATTCCGTGGAGGTGGATGGGGTGAGTCATCATGGTGTCGTTGACCAAAGTGATTCGCAGACGCTCGCCATATTTGAGGCGTAGGGGTTCAGCATCGGAAAATTTGACGCCGTCAAATGACCAg < 2:1857829/150‑1 (MQ=255) tCATCCTCCAGATCGCTCCACATTCCGTGGAGGTGGATGGGGTGAGTCATCATGGTGTCGTTGACCAAAGTGATTCGCAGACGCTCGCCATATTTGAGGCGTAGGGGTTCAGCATCGGAAAATTTGACGCCGTCAAATGACCa < 1:1405888/143‑1 (MQ=255) tCATCCTCCAGATCGCTCCACATTCCGTGGAGGTGGATGGGGTGAGTCATCATGGTGTCGTTGACCAAAGTGATTCGCAGACGCTCGCCATATTTGAGGCGTAGGGGTTCAGCATCGGAAAATTTGACGCCGTCAAATGACCa > 2:1405888/1‑143 (MQ=255) aTCCTCCAGATCGCTCCACATTCCGTGGAGGTGGATGGGGTGAGTCATCATGGTGTCGTTGACCAAAGTGATTCGCAGACGCTCGCCATATTTGAGGCGTAGGGGTTCAGCATCGGAAAATTTGACGCCGTCAAATGACCAGGCGAACtt > 1:2407/1‑150 (MQ=255) tcctccAGATCGCTCCACATTCCGTGGAGGTGGATGGGGTGAGTCATCATGGTGTCGTTGACCAAAGTGATTCGCAGACGCTCGCCATATTTGAGGCGTAGGGGTTCAGCATCGGAAAATTTGACGCCGTCAAATGACCAGGCGAACTtc > 2:352187/1‑150 (MQ=255) ctccAGATCGCTCCACATTCCGTGGAGGTGGATGGGGTGAGTCATCATGGTGTCGTTGACCAAAGTGATTCGCAGACGCTCGCCATATTTGAGGCGTAGGGGTTCAGCATCGGAAAATTTGACGCCGTCAAATGACCAGGCGAACTtctc < 2:2188494/150‑1 (MQ=255) tccAGATCGCTCCACATTCCGTGGAGGTGGATGGGGTGAGTCATCATGGTGTCGTTGACCAAAGTGATTCGCAGACGCTCGCCATATTTGAGGCGTAGGGGTTCAGCATCGGAAAATTTGACGCCGTCAAAt < 1:1816022/132‑1 (MQ=255) tccAGATCGCTCCACATTCCGTGGAGGTGGATGGGGTGAGTCATCATGGTGTCGTTGACCAAAGTGATTCGCAGACGCTCGCCATATTTGAGGCGTAGGGGTTCAGCATCGGAAAATTTGACGCCGTCAAAt > 2:1816022/1‑132 (MQ=255) tccAGATCGCTCCACATTCCGTGGAGGTGGATGGGGTGAGTCATCATGGTGTCGTTGACCAAAGTGATTCGCAGACGCTCGCCATATTTGAGGCGTAGGGGTTCAGCATCGGAAAATTTGACGCCGTCAAATGACCAGGCGAACTTCTcc > 1:1843331/1‑150 (MQ=255) cAGATCGCTCCACATTCCGTGGAGGTGGATGGGGTGAGTCATCATGGTGTCGTTGACCAAAGTGATTCGCAGACGCTCGCCATATTTGAGGCGTAGGGGTTCAGCATCGGAAAATTTGACGCCGTCAAATGACCAGGCGAACTTCTCCat > 1:797156/1‑150 (MQ=255) ccACATTCCGTGGAGGTGGATGGGGTGAGTCATCATGGTGTCGTTGACCAAAGTGATTCGCAGACGCTCGCCATATTTGAGGCGTAGGGGTTCAGCATCGGAAAATTTGACGCCGTCAAATGACCAGGCGAACTTCTCCATATGGCCtgt < 2:1326573/150‑1 (MQ=255) cacaTTCCGTGGAGGTGGATGGGGTGAGTCATCATGGTGTCGTTGACCAAAGTGATTCGCAGACGCTCGCCATATTTGAGGCGTAGGGGTTCAGCATCGGAAAATTTGACGCCGTCAAATGACCAGGCGAACTTCTCCATATGGCCtgtg < 1:8053/150‑1 (MQ=255) cGTGGAGGTGGATGGGGTGAGTCATCATGGTGTCGTTGACCAAAGTGATTCGCAGACGCTCGCCATATTTGAGGCGTAGGGGTTCAGCATCGGAAAATTTGACGCCGTCAAATGACCAGGCGAACTTCTCCATATGGCCTGTGAGATGcc > 2:697599/1‑149 (MQ=255) tGGATGGGGTGAGTCATCATGGTGTCGTTGACCAAAGTGATTCGCAGACGCTCGCCATATTTGAGGCGTAGGGGTTCAGCATCGGAAAATTTGACGCCGTCAAATGACCAGGCGAACTTCTCCATATGGCCTGTGAGATGCAGCTCGATg < 2:1815270/150‑1 (MQ=255) gATGGGGTGAGTCATTATGGTGTCGTTGACCAAAGAGATTCGCAGACGCTCGCCATATTTGAGGCGTAGGGGTTCAGCATCGGAAAATTTGACGCAAATGGATGGCCAGGCGAACTTCTCCATATGGCCTGTGAGATGCAGCTCGATGGt > 2:66067/1‑150 (MQ=255) ggggTGAGTCATCATGGTGTCTTTGACCAAAGTGATTCGCAGACGCTCGCCATATTTGAGGCGTAGGGGTTCAGCATCGGAAAATTTGACGCCGTCAAATGACCAGGCGAACTTCTCCATATGGCCTGTGAGATGCAGCTCGATGGTgcg > 2:1882851/1‑150 (MQ=255) gggTGAGTCATCATGGTGTCTTTGACCAAAGTGATTCGCAGACGCTCGCCATATTTGAGGCGTAGGGGTTCAGCATCGGAAAATTTGACGCCGTCAAATGACCAGGCGAACTTCTCCATATGGCCTGTGAGATGCAGCTCGATGGTgcgc < 1:1882851/150‑1 (MQ=255) ggTGAGTCATCATGGTGTCGTTGACCAAAGTGATTCGCAGACGCTCGCCATATTTGAGGCGTAGGGGTTCAGCATCGGAAAATTTGACGCCGTCAAATGACCAGGCGAACTTCTCCATATGGCCTGTGAGATGCAGCTCGATGGTGCGcc > 2:1671447/1‑150 (MQ=255) ggTGAGTCATCATGGTGTCGTTGACCAAAGTGATTCGCAGACGCTCGCCATATTTGAGGCGTAGGGGTTCAGCATCGGAAAATTTGACGCCGTCAAATGACCAGGCGAACTTCTCCATATGGCCTGTGAGATGCAGCTCGATGGTGCGcc > 1:2383110/1‑150 (MQ=255) gTGAGTCATCATGGTGTCGTTGACCAACGTGATTCGCAGGCGCTCGCCATATATGAGGAGTAGGGGTTCAGCATCGGAAAAGTTGACGCCGTCAAAGGACCAGGCGAACTTCTCCATATGGCCCGTGAGATGCAGCTCGATGGTGCGccc > 2:1127807/1‑150 (MQ=37) gTGAGTCATCATGGTGTCGTTGACCAAAGTGATTCGCAGACGCTCGCCATATTTGAGGCGTAGGGGTTCAGCATCGGAAAATTTGACGCCGTCAAATGACCAGGCGAACTTCTCCATATGGCCTGTGAGATGCAGCTCGATGGt > 2:539147/1‑144 (MQ=255) gTGAGTCATCATGGTGTCGTTGACCAAAGTGATTCGCAGACGCTCGCCATATTTGAGGCGTAGGGGTTCAGCATCGGAAAATTTGACGCCGTCAAATGACCAGGCGAACTTCTCCATATGGCCTGTGAGATGCAGCTCGATGGt < 1:539147/144‑1 (MQ=255) tcatGGTGTCGTTGACCAAAGTGATTCGCAGACGCTCGCCATATTTGAGGCGTAGGGGTTCAGCATCGGAAAATTTGACGCCGTCAAAt < 2:1045758/89‑1 (MQ=255) tcatGGTGTCGTTGACCAAAGTGATTCGCAGACGCTCGCCATATTTGAGGCGTAGGGGTTCAGCATCGGAAAATTTGACGCCGTCAAAt > 1:1045758/1‑89 (MQ=255) tcatGGTGTCGTTGACCAAAGTGATTCGCAGACGCTCGCCATATTTGAGGCGTAGGGGTTCAGCATCGGAAAATTTGACGCCGTCAAATGACCAGGCGAACTTCTCCATATGGCCTGTGAGATGCCGGCAGATGGTGCGCCCTGGTTCAc > 1:1329868/1‑150 (MQ=255) tcatGGTGTCGTTGACCAAAGTGATTCGCAGACGCTCGCCATATTTGAGGCGTAGGGGTTCAGCATCGGAAAATTTGACGACGTCAAGTGGCCGTGCGAACTTCTCCATAGGGCCTGTGAGATGCAGCTCGATGGTGCGCCCTGGTTTAc > 1:893618/1‑150 (MQ=255) catGGTGTCGTTGACCAAAGTGATTCGCAGACGCTCGCCATATTTGAGGCGTAGGGGTTCAGCATCGGAAAATTTGACGCCGTCAAATGACCAGGCGAACTTCTCCATATGGCCTGTGAGATGCAGCTCGATGGTGCGCCCTGGTTCACg > 2:2391981/1‑150 (MQ=255) atGGTGTCGTGGACCAAAGTGATTCGCAGGCGCTCGCCATATTTGAGGCGTAGGGGTTCAGCATCGGAAAATTGGACGCCGTCAAAGGACCAGGCGATCTTCTCCATATGGCCTGTGAGTCGTAGCTCGATGGTGCGCCCTGGTTCACGt < 1:66067/150‑1 (MQ=255) tGGTGTCGTTGACCAAAGTGATTCGCAGACGCTCGCCATATTTGAGGCGTAGGGGTTCAGCATCGGAAAATTTGACGCCGTCAAATGACCAGGCGAACTTCTCCATATGGCCTGTGAGATGCAGCTCGATGGTGCGCCCTGGTTCACGTc > 1:355540/1‑150 (MQ=255) tgtCGTTGACCAAAGTGATTCGCAGACGCTCGCCATATTTGAGGCGTAGGGGTTCAGCATCGGAAAATTTGACGCCGTCAAATGACCAGGCGAACTTCTCCATATGGCCTGTGAGATGCAGCTCGATGGTGCGCCCTGGTTCACGTCCAt > 1:1362152/1‑150 (MQ=255) tttGACCAAAGTGATTCGCAGACTCTCGCCATATTTGAGGCGTAGGTGTTCAGCATCGGAAAATTTGACGCCGTCAAATGACCAGGCGAACTTCTCCATATGGCCTGTGAGATGCAGCTCGATGGTGCGCCCTGGTTCACGTCCATCTgg < 2:355540/149‑1 (MQ=255) gTTGACCAAAGTGATTCGCAGACGCTCGCCATATTTGAGGCGTAGGGGTTCAGCATCGGAAAATTTGACGCCGTCAAATGACCAGGCGAACTTCTCCATATGGCCTGTGAGATGCAGCTCGATGGTGCGCCCTGGTTCACGTcc < 2:41191/144‑1 (MQ=255) gTTGACCAAAGTGATTCGCAGACGCTCGCCATATTTGAGGCGTAGGGGTTCAGCATCGGAAAATTTGACGCCGTCAAATGACCAGGCGAACTTCTCCATATGGCCTGTGAGATGCAGCTCGATGGTGCGCCCTGGTTCACGTcc > 1:41191/1‑144 (MQ=255) gTTGACCAAAGTGATTCGCAGACGCTCGCCATATTTGAGGCGTAGGGGTTCAGCATCGGAAAATTTGACGCCGTCAAATGACCAGGCGAACTTCTCCATATGGCCTGTGAGATGCAGCTCGATGGTGCGCCCTGGTTCACGTCCATCTgg > 2:1015938/1‑150 (MQ=255) gTTGACCAAAGTGATTCGCAGACGCTCGCCATATTTGAGGCGTAGGGGTTCAGCATCGGAAAATTTGACGCCGTCAAATGACCAGGCGAACTTCTCCATATGGCCTGTGAGATGCAGCTCGATGGTGCGCCCTGGTTCACGTCCATCTg > 1:329132/1‑149 (MQ=255) gTTGACCAAAGTGATTCGCAGACGCTCGCCATATTTGAGGCGTAGGGGTTCAGCATCGGAAAATTTGACGCCGTCAAATGACCAGGCGAACTTCTCCATATGGCCTGTGAGATGCAGCTCGATGGTGCGCCCTGGTTCACGTCCATCTg < 2:329132/149‑1 (MQ=255) ttGACCAAAGTGATTCGCAGACGCTCGCCATATTTGAGGCGTAGGGGTTCAGCATCGGAAAATTTGACGCCGTCAAATGACCAGGCGAACTTCTCCATATGGCCTGTGAGATGCAGCTCGATGGTGCGCCCTGGTTCACGTCCATCTGGa < 2:1404352/150‑1 (MQ=255) aaaGTGATTCGCAGACGCTCGCCATATTTGAGGCGTAGGGGTTCAGCATCGGAAAATTTGACGCCGTCAAATGACCAGGCGAACTTCTCCATATGGCCTGTGAGATGCAGCTCGATGGTGCGCCCTGGTTCACGTCCATCTGGa < 2:1801580/144‑1 (MQ=255) aaaGTGATTCGCAGACGCTCGCCATATTTGAGGCGTAGGGGTTCAGCATCGGAAAATTTGACGCCGTCAAATGACCAGGCGAACTTCTCCATATGGCCTGTGAGATGCAGCTCGATGGTGCGCCCTGGTTCACGTCCATCTGGa > 1:1801580/1‑144 (MQ=255) aaGTGATTCGCAGACGCTCGCCATATTTGAGGCGTAGGGGTTCAGCATCGGAAAATTTGACGCCGTCAAATGACCAGGCGAACTTCTCCATATGGCCTGTGAGATGCAGCTCGATGGTGCGCCCTGGTTCACGTCCATCTGGCTCAATGa < 2:1843331/150‑1 (MQ=255) gTGATTCGCAGACGCTCGCCATATTTGAGGCGTAGGGGTTCAGCATCGGAAAATTTGACGCCGTCAAATGACCAGGCGAACTTCTCCATATGGCCTGTGAGATGCAGCTCGATGGTGCGCCCTGGTTCACGTCAATCTGGATCAATGAAc < 2:2407/150‑1 (MQ=255) gATTCGCAGACGCTCGCCATATTTGAGGCGTAGGGGTTCAGCATCGGAAAATTTGACGCCGTCAAATGACCAGGCGAACTTCTCCATATGGCCTGTGAGATGCAGCTCGATGGTGCGCCCTGGTTCACGTCCATCTGGATCAATGAACGt < 1:2391981/150‑1 (MQ=255) aTTCGCAGACGCTCGCCATATTTGAGGCGTAGGGGTTCAGCATCGGAAAATTTGACGCCGTCAAATGACCAGGCGAACTTCTCCATATGGCCTGTGAGATGCAGCTCGATGGTGCGCCCTGGTTCACGTCCATCTGGATCAATGAACGTg > 2:980624/1‑150 (MQ=255) tCGCAGACGCTCGCCATATTTGAGGCGTAGGGGTTCAGCATCGGAAAATTTGACGCCGTCAAATGACCAGGCGAACTTCTCCATATGGCCTGTGAGATGCAGCTCGATGGTGCGCCCTGGTTCACGTCCATCTGGATCAATGAACGTGCt > 2:2094147/1‑150 (MQ=255) gCAGACGCTCGCCATATTTGAGGCGTAGGGGTTCAGCATCGGAAAATTTGACGCCGTCAAATGACCAGGCGAACTTCTCCATATGGCCTGTGAGATGCAGCTCGATGGTGCGCCCTGGTTCACGTCCATCTGGATCAATGAACGTGCTTc < 2:797156/150‑1 (MQ=255) gCAGACGCTCGCCATATTTGAGGCGTAGGGGTTCAGCATCGGAAAATTTGACGCCGTCAAATGACCAGGCGAACTTCTCCATATGGCCTGTGAGATGCAGCTCGATGGTGCGCCCTGGTTCACGTCCATCTGGATCAATGAACGTGCTTc < 2:1362152/150‑1 (MQ=255) cAGACGCTCGCCATATTTGAGGCGTAGGGGTTCAGCATCGGAAAATTTGACGCCGTCAAATGACCAGGCGAACTTCTCCATATGGCCTGTGAGATGCAGCTCGATGGTGCGCCCTGGTTCACGTCCATCTGGATCAATGAACGTGCTTCg > 1:1312319/1‑150 (MQ=255) cAGACGCTCGCCATATTTGAGGCGTAGGGGTTCAGCATCGGAAAATTTGACGCCGTCAAATGACCAGGCGAACTTCTCCATATGGCCTGTGAGATGCAGCTCGATGGTGCGCCCTGGTTCACGTCCATCTGGATCAATGAACGTGCTTCg > 1:1886218/1‑150 (MQ=255) aGACGCTCGCCATATTTGAGGCGTAGGGGTTCAGCATCGGAAAATTTGACGCCGTCAAATGACCAGGCGAACTTCTCCATATGGCCTGTGAGATGCAGCTCGATGGTGCGCCCTGGTTCACGTCCATCTGGATCAATGAACGTGCTTCGc < 1:1015938/150‑1 (MQ=255) gACGCTCGCCATATTTGAGGCGTAGGGGTTCAGCATCGGAAAATTTGACGCCGTCAAATGACCAGGCGAACTTCTCCATATGGCCTGTGAGATGCAGCTCGATGGTGCGCCCTGGTTCACGTCCATCTGGATCAATGAACGTGCTTCGCa < 2:1886218/150‑1 (MQ=255) gCTCGCCATATTTGAGGCGTAGGGGTTCAGCATCGGAAAATTTGACGCCGTCAAATGACCAGGCGAACTTCTCCATATGGCCTGTGAGATGCAGCTCGATGGTGCGCCCTGGTTCACGTCCATCTGGATCAATGAACGTGCTTCGCAGAt > 1:1837708/1‑150 (MQ=255) atatTTGAGGCGTAGGGGTTCAGCATCGGAAAATTTGACGCCGTCAAATGACCAGGCGAACTTCTCCATATGGCCTGTGAGATGCAGCTCGATGGTGCGCCCTGGTTCACGTCCATCTGGATCAATGAACGTGCTTCGCa > 2:919036/1‑140 (MQ=255) atatTTGAGCCGTAGGGGTTCAGCATCGGAAAATTTGACGCCGTCAAATGACCAGGCGAACTTCTCCATATGGCCTGTGAGATGCAGCTCGATGGTGCGCCCTGGTTCACGTCCATCTGGATCAATGAACGTGCTTCGCa < 1:919036/140‑1 (MQ=255) tatTTGAGGCGTAGGGGTTCAGCATCGGAAAATTTGACGCCGTCAAATGACCAGGCGAACTTCTCCATATGGCCTGTGAGATGCAGCTCGTTGGTGCGCCCTGGTTCACGTCCATCTGGATCAATGAACGTGCTTCGCAGATCCGCATAg < 1:1034191/150‑1 (MQ=255) tttGAGGCGTAGGGGTTCAGCATCGGAAAATTTGACGCCGTCAAATGACCAGGCGAACTTCTCCATATGGCCTGTGAGATGCAGCTCGATGGTGCGCCCTGGTTCACGTCCATCTGGATCAATGAACGTGCTTCGCAGATCCGCATGGGt < 2:1043995/150‑1 (MQ=255) tGAGGCGTAGGGGTTCAGCATCGGAAAATTTGACGCCGTCAAATGACCAGGCGAACTTCTCCATATGGCCTGTGAGATGCAGCTCGATGGTGCGCCCTGGTTCACGTCCATCTGGATCAATGAACGTGCTTCGCAGATCCGCATAGGTCa < 1:352187/150‑1 (MQ=255) gTAGGGGTTCAGCATCGGAAAATTTGACGGCGTCAAATCACCAGGCGAACTTATAACTGGTGCCTGTGGGATGCAGCTCGATGGTGCGCCCTGGTTCACGTCCATCTGGATCAATGGACGTGCTTCGCAGATCCGCATAGGTCAGGacac < 1:1233454/150‑1 (MQ=255) gTAGGGGTTCAGCATCGGAAAATTTGACGCCGTCAAATGACCAGGCGAACTTCTCCATATGGCCTGTGAGATGCAGCTCGATGGTGCGCCCTGGTTCACGTCCATCTGGATCAATGAACGTGCTTCGCAGATCCGCATAGGTCAGGacac < 2:725882/150‑1 (MQ=255) gTTCAGCATCGGAAAATTTGACGCCGTCAAATGACCAGGCGAACTTCTCCATATGGCCTGTGAGATGCAGCTCGATGGTGCGCCCTGGTTCACGTCCATCTGGATCAATGAACGTGCTTCGCAGATCCGc > 2:855115/1‑130 (MQ=255) gTTCAGCATCGGAAAATTTGACGCCGTCAAATGACCAGGCGAACTTCTCCATATGGCCTGTGAGATGCAGCTCGATGGTGCGCCCTGGTTCACGTCCATCTGGATCAATGAACGTGCTTCGCAGATCCGc < 1:855115/130‑1 (MQ=255) gTTCAGCATCGGAAAATTTGACGCCGTCAAATGACCAGGCGAACTTCTCCATATGGCCTGTGAGATGCAGCTCGATGGTGCGCCCTGGTTCACGTCCATCTGGATCAATGAACGTGCTTCGCAGATCCGCATAGGTCAGGACACGACGTc > 2:1558580/1‑150 (MQ=255) gTTCAGCATCGGAAAATTTGACGCCGTCAAATGACCAGGCGAACTTCTCCATATGGCCTGTGAGATGCAGCTCGATGGTGCGCCCTGGTTCACGTCCATCTGGATCAATGAACGTGCTTCGCAGATCCGCATAGGTCAGGACACGACGTc > 2:486125/1‑150 (MQ=255) aGCATCGGAAAATTTGACGCCGTCAAATGACCAGGCGAACTTCTCCATATGGCCTGTGAGATGCAGCTCGATGGTGCGCCCTGGTTCACGTCCATCTGGATCAATGAACGTGCTTCGCAGATCCGCATAGGTCAGGACACGACGTCCAtt < 1:1671447/150‑1 (MQ=255) aGCATCGGAAAATTTGACGCCGTCAAATGACCAGGCGAACTTCTCCATATGGCCTGTGAGATGCAGCTCGATGGTGCGCCCTGGTTCACGTCCATCTGGATCAATGAACGTGCTTCGCAGATCCGCATAGGTCAGGACACGACGTCCAtt > 1:1685513/1‑150 (MQ=255) gCATCGGAAAATTTGACGCCGTCAAATGACCAGGCGAACTTCTCCATATGGCCTGTGAGATGCAGCTCGATGGTGCGCCCTGGTTCACGTCCATCTGGATCAATGAAc > 2:1774446/1‑108 (MQ=255) gCATCGGAAAATTTGACGCCGTCAAATGACCAGGCGAACTTCTCCATATGGCCTGTGAGATGCAGCTCGATGGTGCGCCCTGGTTCACGTCCATCTGGATCAATGAAc < 1:1774446/108‑1 (MQ=255) cATCGGAAAATTTGACGCCGTCAAATGACCAGGCGAACTTCTCCATATGGCCTGTGAGATGCAGCTCGATGGTGCGCCCTGGTTCACGTCCATCTGGATCAATGAACGTGCTTCGCAGATCCGCATAGGTCAGGACACGACGTCCAttgt > 1:1897956/1‑150 (MQ=255) aTCGGAAAATTTGACGCCGTCAAATGACCAGGCGAACTTCTCCATATGGCCTGTGAGATGCAGCTCGATGGTGCGCCCTGGTTCACGTCCATCTGGATCAATGAACGTGCTTCGCAGATCCGCATAGGTCAGGACACGACGTCCAttgtt < 1:2254235/150‑1 (MQ=255) aTCGGAAAATTTGACGCCGTCAAATGACCAGGCGAACTTCTCCATATGGCCTGTGAGATGCAGCTCGATGGTGCGCCCTGGTTCACGTCCATCTGGATCAATGAACGTGCTTCGCAGATCCGCATAGGTCAGGACACGACGTCCAttgtt < 2:2036756/150‑1 (MQ=255) ctggtcaTTTGACGGCGTCAAATGACCAGGCGAACTTCTCCATATGGCCTGTGAGATGCAGCTCGATGGTGCGCCCTGGTTCACGTCCATCTGGATCAATGAACGTGCTTCGCAGATCCGCATAGGTCAGGACACGACGTCCATTGTTgc > 1:2231234/7‑150 (MQ=255) cGGAAAATTTGACGACGTCAAATGACCAGGCGAACTTCTCCATATGGCCTGTGAGATGCAGCTCGATGGTGCGCCCTGGTTCACGTCCATCTGGATCAATGAACGTGCTTCGCAGATCCGCATAGGTCAGGACACGACGTCCATTGTTgc < 2:848901/150‑1 (MQ=255) gAAAATTTGACGCCGTCAAATGACCAGGCGAACTTCTCCATATGGCCTGTGAGATg < 1:414930/56‑1 (MQ=255) gAAAATTTGACGCCGTCAAATGACCAGGCGAACTTCTCCATATGGCCTGTGAGATg > 2:414930/1‑56 (MQ=255) gAAAATTTGACGCCGTCAAATGACCAGGCGAACTTCTCCATATGGCCTGTGAGATGCAGCTCGATGGTGCGCCCTGGTTCACGTCCATCTGGATCAATGAACGTGCTTCGCAGATCCGCATAGGTCAGGACACGACGTCCATTGTTgcgc > 2:2311972/1‑150 (MQ=255) gtcaTTTGACGGCGTCAAATGACCAGGCGAACTTCTCCATATGGCCTGTGAGATGCAGCTCGATGGTGCGCCCTGGTTCACGTCCATCTGGa < 1:1765900/89‑1 (MQ=255) gtcaTTTGACGGCGTCAAATGACCAGGCGAACTTCTCCATATGGCCTGTGAGATGCAGCTCGATGGTGCGCCCTGGTTCACGTCCATCTGGa > 2:1765900/4‑92 (MQ=255) aaaTTTGACGCCGTCAAATGACCAGGCGAACTTCTCCATATGGCCTGTGAGATGCAGCTCGATGGTGCGCCCTGGTTCACGTCCATCTGGATCAATGAACGTGCTTCGCAGATCCGCATAGGTCAGGACACGACGTCCATTGTTGCGCaa < 1:513378/150‑1 (MQ=255) aTTTGACGCCGTCAAATGACCAGGCGAACTTCTCCATATGGCCTGTGAGATGCAGCTCGATGGTGCGCCCTGGTTCACGTCCATCTGGATCAATGAACGTGCTTCGCAGATCCGCATAGGTCAGGACACGACGTCCATTGTTGCGCAAGc < 2:1897956/150‑1 (MQ=255) tttGACGCCGTCAAATGACCAGGCGAACTTCTCCATATGGCCTGTGAGATGCAGCTCGATGGTGCGCCCTGGTTCACGTCCATCTGGATCAAt > 1:1711609/1‑93 (MQ=255) tttGACGCCGTCAAATGACCAGGCGAACTTCTCCATATGGCCTGTGAGATGCAGCTCGATGGTGCGCCCTGGTTCACGTCCATCTGGATCAAt < 2:1711609/93‑1 (MQ=255) tttGACGCCGTCAAATGACCAGGCGAACTTCTCCATATGGCCTGTGAGATGCAGCTCGATGGTGCGCCCTGGTTCACGTCCATCTGGATCAATGAACGTGCTTCGCAGATCCGCATAGGTCAg > 2:2183806/1‑123 (MQ=255) tttGACGCCGTCAAATGACCAGGCGAACTTCTCCATATGGCCTGTGAGATGCAGCTCGATGGTGCGCCCTGGTTCACGTCCATCTGGATCAATGAACGTGCTTCGCAGATCCGCATAGGTCAg < 1:2183806/123‑1 (MQ=255) ccGTCAAATGACCAGGCGAACTTCTCCATATGGCCTGTGAGATGCAGCTCGATGGTGCGCCCTGGTTCACGTCCATCTGGATCAATGAACGTGCTTCGCAGATCCGCATAGGTCAGGACACGACGTCCATTGTTGCGCAAGCCGAt < 1:1737554/146‑1 (MQ=255) ccGTCAAATGACCAGGCGAACTTCTCCATATGGCCTGTGAGATGCAGCTCGATGGTGCGCCCTGGTTCACGTCCATCTGGATCAATGAACGTGCTTCGCAGATCCGCATAGGTCAGGACACGACGTCCATTGTTGCGCAAGCCGAt > 2:1737554/1‑146 (MQ=255) | CCATGAAATTACCGTCCTCATCCTCCAGATCGCTCCACATTCCGTGGAGGTGGATGGGGTGAGTCATCATGGTGTCGTTGACCAAAGTGATTCGCAGACGCTCGCCATATTTGAGGCGTAGGGGTTCAGCATCGGAAAATTTGACGCCGTCAAATGACCAGGCGAACTTCTCCATATGGCCTGTGAGATGCAGCTCGATGGTGCGCCCTGGTTCACGTCCATCTGGATCAATGAACGTGCTTCGCAGATCCGCATAGGTCAGGACACGACGTCCATTGTTGCGCAAGCCGAT > NC_002947/6132045‑6132336 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |