| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 571,218 | G→C | 9.0% | V63L (GTT→CTT) | ssb → | single‑stranded DNA‑binding protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 571,218 | 0 | G | C | 9.0% | 342.0 / 20.9 | 111 | V63L (GTT→CTT) | ssb | single‑stranded DNA‑binding protein |
| Reads supporting (aligned to +/- strand): ref base G (51/49); new base C (6/4); total (57/54) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.44e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.15e-01 | |||||||||||
Only 100 of 112 total aligned reads displayed.
TGGCCAGGATCCCGAAGTCCGCTACCTGCCCAACGGTAACGCCGTGACCAACCTGAGCCTGGCCACCAGCGAGCAGTGGACTGACAAGCAGTCGGGCCAGAAGGTCGAGCGTACCGAGTGGCACCGTGTGTCGCTGTTCGGCAAGGTTGCCGAAATCGCTGGCGAATACCTGCGCAAGGGTTCGCAGTGCTACATCGAAGGCAAGCTGCAGACCCGCGAGTGGGAAAAAGACGGCATCAAGCGCTACACCACCGAGATCATCGTCGATATCAACGGCACCATGCAGCTGCTCGGC > NC_002947/571073‑571367 | tgGCCAGGATCCCGAAGTCCGCTACCTGCCCAACGGTAACGCCGTGACCAACCTGAGCCTGGCCACCAGCGAGCAGTGGACTGACAAGCAGTCGGGCCAGAAGGTCGAGCGTACCGAGTGGCACCGTGTGTCGCTGTTCGGCAAGGTTGc < 2:682200/150‑1 (MQ=255) ggCCAGGATCCCGAAGTCCGCTACCTGCCCAACGGTAACGCCGTGACCAACCTGAGCCTGGCCACCAGCGAGCAGTGGACTGACAAGCAGTCGGGCCAGAAGGTCGAGCGTACCGAGTGGCACCGTGTGTCGCTGTTCGGCAAGGTTGcc < 2:1546961/150‑1 (MQ=255) cAGGATCCCGAAGTCCGCTACCTGCCCAACGGTAACGCCGTGACCAACCTGAGCCTGGCCACCAGCGAGCAGTGGACTGACAAGCAGTCGGGCCAGAAGGTCGAGCGTACCGAGTGGCACCGTGTGTCGCTGTTCGGCAAGGTTGCCGaa > 2:1856476/1‑150 (MQ=255) aGGATCCCGAAGTCCGCTACCTGCCCAACGGTAACGCCGTGACCAACCTGAGCCTGGCCACCAGCGAGCAGTGGACTGACAAGCAGTCGGGCCAGAAGGTCGAGCGTACCGAGTGGCACCGTGTGTCGCTGTTCGGCACCGTTTGCGaaa < 2:600121/150‑1 (MQ=255) aGGATCCCGAAGTCCGCTACCTGCCCAACGGTAACGCCGTGACCAACCTGAGCCTGGCCACCAGCGAGCAGTGGACTGACAAGCAGTCGGGCCAGAAGGTCGAGCGTACCGAGTGGCACCGTGTGTCGCTGTTCGGCAAGGTTGCCGaaa > 2:1995508/1‑150 (MQ=255) ggATCCCGAAGTCCGCTACCTGCCCAACGGTAACGCCGTGACCAACCTGAGCCTGGCCACCAGCGAGCAGTGGACTGACAAGCAGTCGGGCCAGAAGGTCGAGCGTACCGAGTGGCACCGTGTGTCGCTGTTCGGCAACCTTGCCGaaca < 2:1356089/150‑3 (MQ=255) tCCCGAAGTCCGCTACCTGCCCAACGGTAACGCCGTGACCAACCTGAGCCTGGCCACCAGCGAGCAGTGGACTGACAAGCAGTCGGGCCAGAAGGTCGAGCGTACCGAGTGGCACCGTGTGTCGCTGTTCGGCAAGGTTGcc < 2:1502181/142‑1 (MQ=255) tCCCGAAGTCCGCTACCTGCCCAACGGTAACGCCGTGACCAACCTGAGCCTGGCCACCAGCGAGCAGTGGACTGACAAGCAGTCGGGCCAGAAGGTCGAGCGTACCGAGTGGCACCGTGTGTCGCTGTTCGGCAAGGTTGcc > 1:1502181/1‑142 (MQ=255) ccGAAGTCCGCTACCTGCCCAACGGTAACGCCGTGACCAACCTGAGCCTGGCCACCAGCGAGCAGTGGACTGACAAGCAGTCGGGCCAGAAGGTCGAGCGTACCGAGTGGCACCGTGTGTCGCTGTTCGGCAAGGTTGCCGAAATCGCTg > 2:560094/1‑150 (MQ=255) ccGAAGTCCGCTACCTGCCCAACGGTAACGCCGTGACCAACCTGAGCCTGGCCACCAGCGAGCAGTGGACTGACAAGCAGTCGGGCCAGAAGGTCGAGCGTACCGAGTGGCACCGTGTGTCGCTGTTCGGCAAGGTTGCCGAAATCGCTg > 1:1638313/1‑150 (MQ=255) cGAAGTCCGCTACCTGCCCAACGGTAACGCCGTGACCAACCTGAGCCTGGCCGCCAGCGAGCAGTGGACTGACAAGCAGTCGGGCCAGAAGGTCGAGCGTACCGAGTGGCACCGTGTGTCGCTGTTCGGCAAGGTTGCCGAAATCGCTgg > 1:1577463/1‑150 (MQ=255) cGAAGTCCGCTACCTGCCCAACGGTAACGCCGTGACCAACCTGAGCCTGGCCACCAGCGAGCAGTGGACTGACAAGCAGTCGGGCCAGAAGGTCGAGCGTACCGAGTGGCACCGTGTGTCGCTGTTCGGCAAGGTTGCCGAAATCGCTgg > 1:503491/1‑150 (MQ=255) cGAAGTCCGCTACCTGCCCAACGGTAACGCCGTGACCAACCTGAGCCTGGCCACCAGCGAGCAGTGGACTGACAAGCAGTCGGGCCAGAAGGTCGAGCGTACCGAGTGGCACCGTGTGTCGCTGTTCGGCAAGGTTGCCGAAATCGCTgg > 1:2353106/1‑150 (MQ=255) cGAAGTCCGCTACCTGCCCAACGGTAACGCCGTGACCAACCTGAGCCTGGCCACCAGCGAGCAGTGGACTGACAAGCAGTCGGGCCAGAAGGTCGAGCGTACCGAGTGGCACCGTGTGTCGCTGTTCGGCAAGGTTGCCGAAATCGCTgg < 1:960898/150‑1 (MQ=255) gAAGTCCGCTACCTGCCCAACGGTAACGCCGTGACCAACCTGAGCCTGGCCACCAGCGAGCAGTGGACTGACAAGCAGTCGGGCCAGAAGGTCGAGCGTACCGAGTGGCACCGTGTGTCGCTGTTCGGCAAGGTTGCCGAAATCGCTGGc > 2:445390/1‑150 (MQ=255) tCCGCTACCTGCCCAACGGTAACGCCGTGACCAACCTGAGCCTGGCCACCAGCGAGCAGTGGACTGACAAGCAGTCGGGCCAGAAGGTCGAGCGTACCGAGTGGCACCGTGTGTCGCTGTTCGGCAAGGTTGCCGAAATCGCTGGCGAAt > 1:1815445/1‑150 (MQ=255) aCCTGCCCAACGGTAACGCCGTGACCAACCTGAGCCTGGCCACCAGCGAGCAGTGGACTGACAAGCAGTCGGGCCAGAAGGTCGAGCGTACCGAGTGGCACCGTGTGTCGCTGTTCGGCAAGGTTGCCGAAATCGCTGGCGAATACCTgc < 1:616941/150‑1 (MQ=255) aCCTGCCCAACGGTAACGCCGTGACCAACCTGAGCCTGGCCACCAGCGAGCAGTGGACTGACAAGCAGTCGGGCCAGAAGGTCGAGCGTACCGAGTGGCACCGTGTGTCGCTGTTCGGCAAGGTTGCCGAAATCGCTGGCGAATACCTgc > 2:1968268/1‑150 (MQ=255) cccAACGGTAACGCCGTGACCAACCTGAGCCTGGCCACCAGCGAGCAGTGGACTGACAAGCAGTCGGGCCAGAAGGTCGAGCGTACCGAGTGGCACCGTGTGTCGCTGTTCGGCAAGGTTGCCGAAATCGCTGGCGAATACCTGCGCAAg > 2:1909826/1‑150 (MQ=255) ccAACGGTAACGCCGTGACCAACCTGAGCCTGGCCACCAGCGAGCAGTGGACTGACAAGCAGTCGGGCCAGAAGGTCGAGCGTACCGAGTGGCACCGTGTGTCGCTGTTCGGCAAGGTTGCCGAAATCGCTGGCGAATACCTGCGCAAgg > 1:949991/1‑150 (MQ=255) cAACGGTAACGCCGTGACCAACCTGAGCCTGGCCACCAGCGAGCAGTGGACTGACAAGCAGTCGGGCCAGAAGGTCGAGCGTACCGAGTGGCACCGTGTGTCGCTGTTCTGCAAGGTTGCCGAAATCGCTGGCGAATACCTGCGCCAggg > 1:519153/1‑150 (MQ=255) cAACGGTAACGCCGTGACCAACCTGAGCCTGGCCACCAGCGAGCAGTGGACTGACAAGCAGTCGGGCCAGAAGGTCGAGCGTACCGAGTGGCACCGTGTGTCGCTGTTCGGCAACCTTGCCGaacagcg > 1:1971335/1‑124 (MQ=255) gTAACGCCGTGACCAACCTGAGCCTGGCCACCAGCGAGCAGTGGACTGACAAGCAGTCGGGCCAGAAGGTCGAGCGTACCGAGTGGCACCGTGTGTCGCTGTTCGGCAAGGTTGCCGAAATCGCTGGCGAATACCTGCGCAAGGGTTCGc < 1:1968268/150‑1 (MQ=255) tgcagCCGTGACCATCCTGAGGTCGTCCACGAGCGAGCAGTGGACTGACAAGCAGTCGGGCCAGAAGGTCGAGCGTACCGAGTGGCACCGTGTGTCGCTGTTCGGCAAGGTTGCCGAAATCGCTGGCGAATACCTGCGCAAGGGTTCGCa < 2:521212/146‑1 (MQ=255) aCGCCGTGACCAACCTGAGCCTGGCCACCAGCGAGCAGTGGACTGACAAGCAGTCGGGCCAGAAGGTCGAGCGTACCGAGTGGCACCGTGTGTCGCTGTTCGGCAAGGTTGcc < 1:867048/113‑1 (MQ=255) aCGCCGTGACCAACCTGAGCCTGGCCACCAGCGAGCAGTGGACTGACAAGCAGTCGGGCCAGAAGGTCGAGCGTACCGAGTGGCACCGTGTGTCGCTGTTCGGCAAGGTTGcc > 2:867048/1‑113 (MQ=255) aCGCCGTGACCAACCTGAACCTGGCCACCAGCGAGCAGTGGACTGACAAGCAGTCGGGCCAGAAGGTCGAGCGTAGCGAGTGGCACCGTGTGTCGCTGTTCGGCAAGGTTGCCGAAATCGCTGGCGAATACGTGCGCAAGGGTTCGCAGt > 2:465678/1‑150 (MQ=255) ccAACCTGAGCCTGGCCACCAGCGAGCAGTGGACTGACAAGCAGTCGGGCCAGAAGGTCGAGCGTACCGAGTGGCACCGTGTGTCGCTGTTCGGCAAGGTTGCCGAAATCGCTGGCGAATACCTGCGCAAGGGTTCGCAGTGCTACATCg > 2:281201/1‑150 (MQ=255) ccAACCTGAGCCTGGCCACCAGCGAGCAGTGGACTGACAAGCAGTCGGGCCAGAAGGTCGAGCGTACCGAGAGAATCTTGGTGTCTCTGTTCGGCAAGGTTGCCGAAATCGCTGGCGAATACCTGCGCAAGGGTTCGCAGTGCTACATCg > 1:2099134/1‑150 (MQ=255) cAACCTGAGCCTGGCCACCAGCGAGCAGTGGACTGACAAGCAGTCGGGCCAGAAGGTCGAGCGTACCGAGTGGCACCGTGTGTCGCTGTTCGGCAAGGTTGCCGAAATCGCTGGCGAATACCTGCGCAAGGGTTCGCAGTGCTACATCGa > 1:618156/1‑150 (MQ=255) cAACCTGAGCCTGGCCACCAGCGAGCAGTGGACTGACAAGCAGTCGGGCCAGAAGGTCGAGCGTACCGAGTGGCACCGTGTGTCGCTGTTCGGCAAGGTTGCCGAAATCGCTGGCGAATACCTGCGCAAGGGTTCGCAGTGCTACATCGa > 2:1347529/1‑150 (MQ=255) aaCCTGAGCCTGGCCACCAGCGAGCAGTGGACTGACAAGCAGTCGGGCCAGAAGGTCGAGCGTACCGAGTGGCACCGTGTGTCGCTGTTCGGCAAGGTTGCCGAAATCGCTGGCGAATACCTGCGCAAGGGTTCGCAGTGCTACATCGaa < 2:1649718/150‑1 (MQ=255) aaCCTGAGCCTGGCCACCAGCGAGCAGTGGACTGACAAGCAGTCGGGCCAGAAGGTCGAGCGTACCGAGTGGCACCGTGTGTCGCTGTTCGGCAAGGTTGCCGAAATCGCTGGCGAATACCTGCGCAAGGGTTCGCAGTGCTACATCGaa < 2:1815445/150‑1 (MQ=255) aaCCTGAGCCTGGCCACCAGCGAGCAGTGGACTGACAAGCAGTCGGGCCAGAAGGTCGAGCGTACCGAGTGGCACCGTGTGTCGCTGTTCGGCAAGGTTGCCGAAATCGCTGGCGAATACCTGCGCAAGGGTTCGCAGTGCTACATCGaa < 2:1638313/150‑1 (MQ=255) aaCCTGAGCCTGGCCACCAGCGAGCAGTGGACTGACAAGCAGTCGGGCCAGAAGGTCGAGCGTACCGAGTGGCACCGTGTGTCGCTGTTCGGCAAGGTTGCCGAAATCGCTGGCGAATACCTGCGCAAGGGTTCGCAGTGCTACATCGaa < 1:560094/150‑1 (MQ=255) aaCCTGAGCCTGGCCACCAGCGAGCAGTGGACTGACAAGCAGTCGGGCCAGAAGGTCGAGCGTACCGAGTGGCACCGTGTGTCGCTGTTCGGCAACCTTGCCGaaca < 1:167429/107‑3 (MQ=255) aaCCTGAGCCTGGCCACCAGCGAGCAGTGGACTGACAAGCAGTCGGGCCAGAAGGTCGAGCGTAACGAGTGGCACACTCTTTCGCTGTCCGTCGAGGGGTCCGAAATCGCTGGCGAATACCTGCGCAAGGGTTCGCAGTGCTACATCGaa < 1:1498622/150‑1 (MQ=255) cTGAGCCTGGCCACCAGCGAGCAGTGGACTGACAAGCAGTCGGGCCAGAAGGTCGAGCGTACCGAGTGGCACCGTGTGTCGCTGTTCGGCAAGGTTGCCGAAATCGCTGGCGAATACCTGCGCAAGGGTTCGCAGTGCTACATCGAAGGc < 2:493828/150‑1 (MQ=255) gCCTGGCCACCAGCGAGCAGTGGACTGACAAGCAGTCGGGCCAGAAGGTCGAGCGTACCGAGTGGCACCGTGTGTCGCTGTTCGGCAAGGTTGCCGAAATCGCTGGCGAATACCTGCGCAAGGGTTCGCAGTGCTACATCGAAGGCAAGc < 1:85983/150‑1 (MQ=255) tGGCCACCAGCGAGGAGTGGCCTGACAAGCAGTCGGGCCAGAAGGTCGAGCGTACCGAGTGGCACCGTGTGTCGCTGTTCGGCAAGGTTGCCGAAATCGCTGGCGAATACCTGCGCAAGGGTTCGCAGTGCTACATCGAAGGCAAGCTGc < 2:736596/150‑1 (MQ=255) caGCGAGCAGTGGACTGACAAGCAGTCGGGCCAGAAGGTCGAGCGTACCGAGTGGCACCGTGTGTCGCTGTTCGGCAACCTTGCCGaaca < 1:1062619/90‑3 (MQ=255) caGCGAGCAGTGGACTGACAAGCAGTCGGGCCAGAAGGTCGAGCGTACCGAGTGGCACCGTGTGTCGCTGTTCGGCAACCTTGCCGaaca > 2:1062619/1‑88 (MQ=255) aGCGAGCAGTGGACTGACAAGCAGTCGGGCCAGAAGGTCGAGCGTACCGAGTGGCACCGTGTGTCGCTGTTCGGCAAGGTTGCCGAAATCGCTGGCGAATACCTGCGCAAGGGTTCGCAGTGCTACATCGAAGGCAAGCTGCAGACCcgc < 2:844285/150‑1 (MQ=255) gCAGTGGACTGACAAGCAGTCGGGCCAGAAGGTCGAGCGTACCGAGTGGCACCGTGTGTCGCTGTTCGGCAAGGTTGCCGAAATCGCTGGCGAATACCTGCGCAAGGGTTCGCAGTGCTACATCGAAGGCAAGCTGCAGACCCGCGAGTg < 1:1653379/150‑1 (MQ=255) aGTGGACTGACAAGCAGTCGGGCCAGAAGGTCGAGCGTACCGAGTGGCACCGTGTGTCGCTGTTCGGCAAGGTTGCCGAAATCGCTGGCGAATACCTGCGCAAGGGTTCGCAGTGCTACATCGAAGGCAAGCTGCAGACCCGCGAGTggg < 1:1347529/150‑1 (MQ=255) gTGGACTGACAAGCAGTCGGGCCAGAAGGTCGAGCGTACCGAGTGGCACCGTGTGTCGCTGTTCGGCAAGGTTGCCGAAATCGCTGGCGAATACCTGCGCAAGGGTTCGCAGTGCTACATCGAAGGCAAGCTGCAGACCCGCGAGTGGGa > 2:1523753/1‑150 (MQ=255) ggACTGACAAGCAGTCGGGCCAGAAGGTCGAGCGTACCGAGTGGCACCGTGTGTCGCTGTTCGGCAAGGTTGCCGAAATCGCTGGCGAATACCTGCGCAAGGGTTCGCAGTGCTACATCGAAGGCAAGCTGCAGACCCGCGAGTGGGaaa < 2:2353106/150‑1 (MQ=255) tGACAAGCAGTCGGGCCAGAAGGTCGAGCGTACCGAGTGGCACCGTGTGTCGCTGTTCGGCAAGGTTGCCGAAATCGCTGGCGAATACCTGCGCAAGGGTTCGCAGTGCTACATCGAAGGCAAGCTGCAGACCCGCGAGTgg > 1:78337/1‑142 (MQ=255) tGACAAGCAGTCGGGCCAGAAGGTCGAGCGTACCGAGTGGCACCGTGTGTCGCTGTTCGGCAAGGTTGCCGAAATCGCCGGCGAATACCTGCGCAAGGGTTCGCAGTGCTACATCGAAGGCAAGCTGCAGACCCGCGAGTgg < 2:78337/142‑1 (MQ=255) aCAAGCAGTCGGGCCAGAAGGTCGAGCGTACCGAGTGGCACCGTGTGTCGCTGTTCGGCAAGGTTGCCGAAATCGCTGGCGAATACCTGCGCAAGGGTTCGCAGTGCTACATCGAAGGCAAGCTGCAGACCCGCGAGTGGGAAAAAGAc > 2:1368134/1‑149 (MQ=255) cAAGCAGTCGGGCCAGAAGGTCGAGCGTACCGAGTGGCACCGTGTGTCGCTGTTCGGCAAGGTTGCCGAAATCGCTGGCGAATACCTGCGCAAGGGTTCGCAGTGCTACATCGAAGGCAAGCTGCAGACCCGCGAGTGGGAAAAAGACgg < 1:445390/150‑1 (MQ=255) cAAGCAGTCGGGCCAGAAGGTCGAGCGTACCGAGTGGCACCGTGTGTCGCTGTTCGGCAAGGTTGCCGAAATCGCTGGCGAATACCTGCGCAAGGGTTCGCAGTGCTACATCGAAGGCAAGCTGCAGACCCGCGAGTGGGAAAAAGACgg < 1:281201/150‑1 (MQ=255) aaGCAGTCGGGCCAGAAGGTCGAGCGTACCGAGTGGCACCGTGTGTCGCTGTTCGGCAAGGTTGCCGAAATCGCTGGCGAATACCTGCGCAAGGGTTCGCAGTGCTACATCGAAGGCAAGCTGCAGACCCGCGAGTGGGAAAAAAACGGc > 2:509671/1‑150 (MQ=255) gCAGTCGGGCCAGAAGGTCGAGCGTACCGAGTGGCACCGTGTGTCGCTGTTCGGCAAGGTTGCCGAAATCGCTGGCGAATACCTGCGCAAGGGTTCGCAGTGCTACATCGAAGGCAAGCTGCAGACCCGCGAGTGGGa < 1:478490/138‑1 (MQ=255) aGTCGGGCCAGAAGGTCGAGCGTACCGAGTGTCACCGTGTGTCGCTGTTCGGCAAGGTTGCCGAAATCGCTGGCGAATACCTGCGCAAGGGTTCGCAGTGCTACATCGAAGGCAAGCTGCAGACCCGCGAGTGGGAAAAAGACGGCAtga > 1:2085463/1‑148 (MQ=255) aGTCGGGCCAGAAGGTCGAGCGTACCGAGTGGCACCGTGTGTCGCTGTTCGGCAAGGTTGCCGAAATCGc > 2:1665541/1‑70 (MQ=255) gTCGGGCCAGAAGGTCGAGCGTACCGAGTGGCACCGTGTGTCGCTGTTCGGCAAGGTTGCCGAAATCGCTGGCGAATACCTGCGCAAGGGTTCGCAGTGCTACATCGAAGGCAAGCTGCAGACCCGCGAGTGGGAAAAAGACGGCATCaa < 2:949991/150‑1 (MQ=255) gggCCAGAAGGTCGAGCGTACCGAGTGGCACCGTGTGTCGCTGTTCGGCAAGGTTGCCGAAATCGCTGGCGAATACCTGCGCAAGGGTTCGCAGTGCTACATCGAAGGCAAGCTGCAGACCCGCGAGTGGGAAAAAGACGGCATCAAgcg > 2:726943/1‑150 (MQ=255) ggCCAGAAGGTCGAGCGTACCGAGTGGCACCGTGTGTCGCTGTTCGGCAAGGTTGCCGAAATCGCTGGCGAATACCTGCGCAAGGGTTCGCAGTGCTACATCGAAGGCAAGCTGCAGACCCGCGAGTGGGAAAAAGACGGCATCAAgcgc < 2:1826589/150‑1 (MQ=255) ccAGAAGGTCGAGCGTACCGAGTGGCACCGTGTGTCGCTGTTCGGCAAGGTTGCCGAAATCGCTGGCGAATACCTGCGCAAGGGTTCGCAGTGCTACATCGAAGGCAAGCTGCAGACCCGCGAGTGGGAAAAAGACGGCATCAAGCGCTa > 1:122433/1‑150 (MQ=255) aGAAGGTCGAGCGTACCGAGTGGCACCGTGTGTCGCTGTTCGGCAAGGTTGCCGAAATCGCTGGCGAATACCTGCGCAAGGGTTCGCAGTGCTACATCGAAGGCAAGCTGCAGACCCGCGAGTGGGAAAAAGACGGCATCAAGCGCTaca < 1:1451367/150‑1 (MQ=255) gAAGGTCGAGCGTACCGAGTGGCACCGTGTGTCGCTGTTCGGCAAGGTTGCCGAAATc < 2:1203491/58‑1 (MQ=255) gAAGGTCGAGCGTACCGAGTGGCACCGTGTGTCGCTGTTCGGCAAGGTTGCCGAAATc > 1:1203491/1‑58 (MQ=255) aaGGTCGAGCGTACCGAGTGGCACCGTGTGTCGCTGTTCGGCAAGGTTGCCGAAATCGCTGGCGAAt < 1:2353240/67‑1 (MQ=255) aaGGTCGAGCGTACCGAGTGGCACCGTGTGTCGCTGTTCGGCAAGGTTGCCGAAATCGCTGGCGAAt > 2:2353240/1‑67 (MQ=255) gTCGAGCGTACCGAGTGGCACCGTGTGTCGCTGTTCGGCAAGGTTGCCGAAATCGCTGGCGAATACCTGCGCAAGGGTTCGCAGTGCTACATCGAAGGCAAGCTGCAGACCCGCGAGTGGGAAAAAGACGGCATCAAGCGCTACaccacc > 2:2038554/1‑150 (MQ=255) gTCGAGCGTACCGAGTGGCACCGTGTGTCGCTGTTCGGCAAGGTTGCCGAAATCGCTGGCGAATACCTGCGCAAGGGTTCGCAGTGCTACATCGAAGGCAAGCTGCAGACCCGCGAGTGGGAAAAAGACGGCATCAAGCGCTACaccacc < 2:2099134/150‑1 (MQ=255) tCGAGCGTACCGAGTGGCACCGTGTGTCGCTGTTCGGCAAGGTTGCCGAAATCGCTGGCGAATACCTGCGCAAGGGTTCGCAGTGCTACATCGAAGGCAAGCTGCAGACCCGCGAGTGGGAAAAAGACGGCATCAAGCGCTACACCACCg > 1:1291127/1‑150 (MQ=255) aGCGTACCGAGTGGCACCGTGTGTCGCTGTTCGGCAAGGTTGCCGAAATCGCTGGCGAATACCTGCGCAAGGGTTCGCAGTGCTACATCGAAGGCAAGCTGCAGACCCGCGAGTGGGAAAAAGACGGCATCAAGCGCTACACCACCgaga > 2:180567/1‑150 (MQ=255) gCGTACCGAGTGGCACCGTGTGTCGCTGTTCGGCAAGGTTGCCGAAATCGCTGGCGAATACATGCGCAAGGGTTCGCAGTGCTACATCGAAGGCAAGCTGCAGACCCGCGAGTGGGAAAAAGACGGCATCAAGCGCTACACCACCGAGat > 2:1439903/1‑150 (MQ=255) aCCGAGTGGCACCGTGTGTCGCTGTTCGGCAAGGTTGCCGAAATCGCTGGCGAATACCTGCGCAAGGGTTCGCAGTGCTACATCGAAGGCAAGCTGCAGACCCGCGAGTGGGAAAAAGACGGCATCAAGCGCTACACCACCGAGatcatc > 1:1129632/1‑150 (MQ=255) ccGAGTGGCACCGTGTGTCGCTGTTCGGCAAGGTTGCCGAAATCGCTGGCGAATACCTGCGCAAGGGTTCGCAGTGCTACATCGAAGGCAAGCTGCAGACCCGCGAGTGGGAAAAAGACGGCATCAAGCGCTACACCACCGAGATCAtcg > 2:1414544/1‑150 (MQ=255) cGAGTGGCACCGTGTGTCGCTGTTCGGCAAGGTTGCCGAAATCGCTGGCGAATACCTgc < 2:1899422/59‑1 (MQ=255) cGAGTGGCACCGTGTGTCGCTGTTCGGCAAGGTTGCCGAAATCGCTGGCGAATACCTgc > 1:1899422/1‑59 (MQ=255) gAGTGGCACCGTGTGTCGCTGTTCGGCAAGGTTGCCGAAATCGCTGGCGAATACCTGCGCAAGGGTTCGCAGTGCTACATCGAAGGCAAGCTGCAGACCCGCGAGTGGGAAAAAGACGGCATCAAGCGCTACACCACCGAGATCAtcgtc < 1:1909826/150‑1 (MQ=255) gCACCGTGTGTCGCTGTTCGGCAAGGTTGCCGAAATCGCTGGCGAATACCTGCGCAAGGGTTCGCAGTGCTACATCGAAGGCAAGCTGCAGACCCGCGAGTGGGAAAAAGACGGCATCAAGCGCTACACCACCGAGATCATCGTCGatat > 1:2092790/1‑150 (MQ=255) aCCGTGTGTCGCTGTTCGGCAAGGTTGCCGAAATCGCTGGCGAATACCTGCGCAAGGGTTCGCAGTGCTACATCGaa > 2:717373/1‑77 (MQ=255) aCCGTGTGTCGCTGTTCGGCAAGGTTGCCGAAATCGCTGGCGAATACCTGCGCAAGGGTTCGCAGTGCTACATCGaa < 1:717373/77‑1 (MQ=255) gtgtgtCGCTGTTCTGCAAGGTTGCCGAAATCGCTGGCGAATACCTGCGCAAGGGTTCGCAGTGCTACATCGAAGGCAAGCTGCAGACCCGCGAGTGGGAAAAAGACGGCATCAAGCGCTACACCACCGAGATCATCGTCGATATCAACg < 1:1846224/150‑1 (MQ=255) tgtgtCGCTGTTCGGCAAGGTTGCCGAAATCGCTGGCGAATACCTGCGCAAGGGTTCGCAGTGCTACATCGAAGGCAAGCTGCAGACCCGCGAGTGGGAAAAAGACGGCATCAAGCGCTACACCACCGAGATCATCGTCGATATCAACgg < 1:1414544/150‑1 (MQ=255) gtCGCTGTTCGGCAAGGTTGCCGAAATCGCTGGCGAATACCTGCGCAAGGGTTCGCAGTGCTACATCGAAGGCAAGCTGCAGACCCGCGAGTGGGAAAAAGACg < 1:1336584/104‑1 (MQ=255) gtCGCTGTTCGGCAAGGTTGCCGAAATCGCTGGCGAATACCTGCGCAAGGGTTCGCAGTGCTACATCGAAGGCAAGCTGCAGACCCGCGAGTGGGAAAAAGACg > 2:1336584/1‑104 (MQ=255) tCGCTGTTCGGCAAGGTTGCCGAAATCGCTGGCGAATACCTGCGCAAGGGTTCGCAGTGCTACATCGAAGGCAAGCTGCAGACCCGCGAGTg < 1:1265494/92‑1 (MQ=255) tCGCTGTTCGGCAAGGTTGCCGAAATCGCTGGCGAATACCTGCGCAAGGGTTCGCAGTGCTACATCGAAGGCAAGCTGCAGACCCGCGAGTg > 2:1265494/1‑92 (MQ=255) tCGCTGTTCGGCAAGGTTGCCGAAATCGCTGGCGAATACCTGCGCAAGGGTTCGCAGTGCTACATCGAAGGCAAGCTGCAGACCCGCGAGTGGGAAAAAGACGGCATCAAGCGCTACACCACCGAGATCATCGTCGATATCAACGGCAcc > 1:2173007/1‑150 (MQ=255) tGTTCGGCAAGGTTGCCGAAATCGCTGGCGAATACCTGCGCAAGGGTTCGCAGTGCTACATCGAAGGCAAGCTGCAGACCCGCGAGTgg > 1:248284/1‑89 (MQ=255) tGTTCGGCAAGGTTGCCGAAATCGCTGGCGAATACCTGCGCAAGGGTTCGCAGTGCTACATCGAAGGCAAGCTGCAGACCCGCGAGTgg < 2:248284/89‑1 (MQ=255) tGTTCGGCAAGGTTGCCGAAATCGCTGGCGAATACCTGCGCAAGGGTTCGCAGTGCTACATCGAAGGCAAGCTGCAGACCCGCGAGTGGGAAAAAGACGGCATCAAGCGCTACACCACCGAGATCATCGTCGATATCAACGGCACCATGc > 2:1673689/1‑150 (MQ=255) atttCGGCAACCTTGCCGAAATCGCTGGCGAATACCTGCGCAAGGGTTCGCAGTGCTACATCGAAGGCAAGCTGCAGACCCGCGAGTGGGAAAAAGACGGAATCAAGCGCTACACCACCGAGATCATCGTCGATATCAACGGCACCATGc > 2:483267/3‑150 (MQ=255) tttCGGCAACCTTGCCGAAATCGCTGGCGAATACCTGCGCAAGGGCTCGCAGGGCTACATCGAAGGCAAGCTGCAGACCCGCGAGTGGGAAAAAGACGGCATCAAGCGCTACACCACCGAGATCATCGTCGATATCAACGGCACCATGCa > 2:1623467/2‑150 (MQ=255) gTTCGGCAAGGTTGCCGAAATCGCTGGCGAATACCTGCGCAAGGGTTCGCAGTGCTACATCGAAGGCAAGCTGCAGACCCGCGAGTGGGAAAAAGACGGCATCAAGCGCTACACCACCGAGATCATCGTCGATATCAACGGCACCATGCa < 2:503491/150‑1 (MQ=255) gTTCGGCAAGGTTGCCGAAATCGCTGGCGAATACCTGCGCAAGGGTTCGCAGTGCTACATCGAAGGCAAGCTGCAGACCCGCGAGTGGGAAAAAGACGGCATCAAGCGCTACACCACCGAGATCATCGTCGATATCAACGGCACCATGCa < 1:2038554/150‑1 (MQ=255) gTTCGGCAAGGTTGCCGAAATCGCTGGCGAATACCCGCGCAAGGGTTCGCAGTGCTACATCGAAGGCAAGCTGCAGACCCGCGAGTGGGAAAAAGACGGCATCAAGCGCTACACCACCGAGATCATCGTCGATATCAACGGCACCATGCa < 2:1291127/150‑1 (MQ=255) cGGCAAGGTTGCCGAAATCGCTGGCGAATACCTGCGCAAGGGTTCGCAGTGCTACATCGAAGGCAAGCTGCAGACCCGCGAGTGGGAAAAAGACGGCATCAAGCGCTACACCACCGAGATCATCGTCGATATCAGCGGCACCATGCAgct > 2:1682014/1‑150 (MQ=255) ggCAAGGTTGCCGAAATCGCTGGCGAATACCTGCGCAAGGGTTCGCAGTGCTACATCGAAGGCAAGCTGCAGACCCGCGAGTGGGAAAAAGACGGCATCAAGCGCTACACCACCGAGATCAtcgtc < 2:1248439/126‑1 (MQ=255) ggCAAGGTTGCCGAAATCGCTGGCGAATACCTGCGCAAGGGTTCGCAGTGCTACATCGAAGGCAAGCTGCAGACCCGCGAGTGGGAAAAAGACGGCATCAAGCGCTACACCACCGAGATCAtcgtc > 1:1248439/1‑126 (MQ=255) cAAGGTTGCCGAAATCGCTGGCGAATACCTGCGCAAGGGTTCGCAGTGCTACATCGAAGGCAAGCTGCAGACCCGCGAGTGGGAAAAAGACGGCATCAAGCGCTACACCACCGAGATCATCGTCGATATCAAc > 1:1445515/1‑133 (MQ=255) cAAGGTTGCCGAAATCGCTGGCGAATACCTGCGCAAGGGTTCGCAGTGCTACATCGAAGGCAAGCTGCAGACCCGCGAGTGGGAAAAAGACGGCATCAAGCGCTACACCACCGAGATCATCGTCGATATCAAc < 2:1445515/133‑1 (MQ=255) cAAGGTTGCCGAAATCGCTGGCGAATACCTGCGCAAGGGTTCGCAGTGCTACATCGAAGGCAAGCTGCAGACCCGCGAGTGGGAAAAAGACGGCATCAAGCGCTACACCACCGAGATCATCGTCGATATCAACGGCACCATGctgctggc > 2:557712/1‑148 (MQ=255) gTTGCCGAAATCGCTGGCGAATACCTGCGCAAGGGTTCGCAGTGCTACATCGAAGGCAAGCTGCAGACCCGCGAGTGGGAAAAAGACGGCATCAAGCGCTACACCACCGAGATCATCGTCGATATCAACGGCACCATGCAGCTGCTcggc > 1:1838932/1‑150 (MQ=255) | TGGCCAGGATCCCGAAGTCCGCTACCTGCCCAACGGTAACGCCGTGACCAACCTGAGCCTGGCCACCAGCGAGCAGTGGACTGACAAGCAGTCGGGCCAGAAGGTCGAGCGTACCGAGTGGCACCGTGTGTCGCTGTTCGGCAAGGTTGCCGAAATCGCTGGCGAATACCTGCGCAAGGGTTCGCAGTGCTACATCGAAGGCAAGCTGCAGACCCGCGAGTGGGAAAAAGACGGCATCAAGCGCTACACCACCGAGATCATCGTCGATATCAACGGCACCATGCAGCTGCTCGGC > NC_002947/571073‑571367 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |