| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 6,169,846 | T→A | 6.1% | S169C (AGC→TGC) | PP_5408 ← | hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 6,169,846 | 0 | T | A | 6.1% | 239.4 / 6.4 | 82 | S169C (AGC→TGC) | PP_5408 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (35/42); new base A (3/2); total (38/44) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.59e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.60e-01 | |||||||||||
GTCTATGTTTTTTAGTTTGCTTTCGAGCACCCGTAGAACCGTTTCAAGTGCAAGGTGGTGCTCAAGGAGGCAGATCCTTCCGTAGAATTGTGCCAGCCGCAATGCCAATGGGTCCCTGTTGGCCGTAGGCCTTGCGCTGCCTAGGCTGCGCCCGCAACATCCGCTCCACATTACCTGGACAGAGTGGCCATCGCGAGAAAATGGCTGCTCACAGAACTGGCAGTACGAGAGCAAATCGACGTTGTGCTTCGCGCACACAGTTACATGTGGGTGAAGACGTCGCCAATAAGAGTAAC > NC_002947/6169700‑6169995 | gTCTATGTTTTTTTTTTTTCTTTAGAGTACACGTAGAA‑CTTATCAAGGTCCAAGAGGTGCTGAAAGAGGGAGAACCGTCCGCAGAATTGTTCCAGCCGCAATTCCAATTGGTTCCTGTTTGCCGTAGGCCTTGCGCTGCCTATGCTgcgc > 2:1834631/1‑150 (MQ=255) tCTATGTTTTTTAGTTTGCTTTCGAGCACCCGTAGAACCGTTTCAAGTGCAAGGTGGTGCTCAAGGAGGCAGATCCTTCCGTAGAATTGTGCCAGCCGCAATGCCAATGGGTCCCTGTTGGCCGTAGGCCTTGCGCTGCCTAGGCTgcgc > 2:2216135/1‑150 (MQ=255) tCTATGTTTTTTAGTTTGCTTTCGAGCACCCGTAGAACCGTTTCAAGTGCAAGGTGGTGCTCAAGGAGGCAGATCCTTCCGTAGAATTGTGCCAGCCGCAATGCCAATGGGTCCCTGTTGGCCGTAGGCCTTGCGCTGCCTAGGCTgcgc > 1:1189816/1‑150 (MQ=255) tATGTTTTTTAGTTTGCTTTCGAGCACCCGTAGAACCGTTTCAAGTGCAAGGTGGTGCTCAAGGAGGCAGATCCTTCCGTAGAATTGTGCCAGCCGCAATGCCAATGGGTCCCTGTTGGCCGTAGGCCTTGCGCTGCCTAGGCTGCGccc > 1:274902/1‑150 (MQ=255) tATGTTTTTTAGTTTGCTTTCGAGCACCCGTAGAACCGTTTCAAGTGCAAGGTGGTGCTCAAGGAGGCAGATCCTTCCGTAGAATTGTGCCAGCCGCAATGCCAATGGGTCCCTGTTGGCCGTAGGCCTTGCGCTGCCTAGGCTGCGccc > 2:1047906/1‑150 (MQ=255) attttttttAGTTTGCTTTCGAGCACCCGTAGAACCGTTTCAAGTGCAAGGTGGTGCTCAAGGAGGCAGATCCTTCCGTAGAATTGTGCCAGCCGCAATGCCAATGGGTCCCTGTTGGCCGTAGGCCTTGCGCTGCCTAGGCTGCGCCCg < 1:645500/147‑1 (MQ=255) ttttttAGTTTGCTTTCGAGCACCCGTAGAACCGTTTCAAGTGCAAGGTGGTGCTCAAGGAGGCAGATCCTTCCGTAGAATTGTGCCAGCCGCAATGCCAATGGGTCCCTGTTGGCCGTAGGCCTTGCGCTGCCTAGGCTGCGCCCGCaa < 1:662622/150‑1 (MQ=255) ttttttAGTTTGCTTTCGAGCACCCGTAGAACCGTTTCAAGTGCAAGGTGGTGCTCAAGGAGGCAGATCCTTCCGTAGAATTGTGCCAGCCGCAATGCCAATGGGTCCCTGTTGGCCGTAGGCCTTGCGCTGCCTAGGCTGCGCCCGCaa > 2:77755/1‑150 (MQ=255) ttttAGTTTGCTTTCGAGCACCCGTAGAACCGTTTCAAGTGCAAGGTGGTGCTCAAGGAGGCAGATCCTTCCGTAGAATTGTGCCAGCCGCAATGCCAATGGGTCCCTGTTGGCCGTAGGCCTTGCGCTGCCTAGGCTGCGCCCGCAACa < 2:1344718/150‑1 (MQ=255) gTTTGCTTTCGAGCACCCGTAGAACCGTTTCAAGTGCAAGGTGGTGCTCAAGGAGGCAGATCCTTCCGTAGAATTGTGCCAGCCGCAATGCCAATGGGTCCCTGTTGGCCGTAGGCCTTGCGCTGCCTAGGCTGCGCCCGCAACATCCGc < 1:1547693/150‑1 (MQ=255) gTTTGCTTTCGAGCACCCGTAGAACCGTTTCAAGTGCAAGGTGGTGCTCAAGGAGGCAGATCCTTCCGTAGAATTGTGCCAGCCGCAATGCCAATGGGTCCCTGTTGGCCGTAGGCCTTGCGCTGCCTAGGCTGCGCCCGCAACATCCGc < 2:1859717/150‑1 (MQ=255) gCTTTCGAGCACCCGTAGAACCGTTTCAAGTGCAAGGTGGTGCTCAAGGAGGCAGATCCTTCCGTAGAATTGTGCCAGCCGCAATGCCAATGGGTCCCTGTTGGCCGTAGGCCTTGCGCTGCCTAGGCTGCGCCCGCAACATCCGCTCca < 2:1333906/150‑1 (MQ=255) tttCGAGCACCCGTAGAACCGTTTCAAGTGCAAGGTGGTGCTCAAGGAGGCAGATCCTTCCGTAGAATTGTGCCAGCCGCAATGCCAATGGGTCCCTGTTGGCCGTAGGCCTTGCGCTGCCTAGGCt < 2:1846621/127‑1 (MQ=255) tttCGAGCACCCGTAGAACCGTTTCAAGTGCAAGGTGGTGCTCAAGGAGGCAGATCCTTCCGTAGAATTGTGCCAGCCGCAATGCCAATGGGTCCCTGTTGGCCGTAGGCCTTGCGCTGCCTAGGCt > 1:1846621/1‑127 (MQ=255) tttCGAGCACCCGTAGAACCGTTTCAAGTGCAAGGTGGTGCTCAAGGAGGCAGATCCTTCCGTAGAATTGTGCCAGCCGCAATGCCAATGGGTCCCTGTTGGCCGTAGGCCTTGCGCTGCCTAGGCTGCGCCCGCAACATCCGCTCcaca < 1:77755/150‑1 (MQ=255) tttCGAGCACCCGTAGAACCGTTTCAAGTGCAAGGTGGTGCTCAAGGAGGCAGATCCTTCCGTAGAATTGTGCCAGCCGCAATGCCAATGGGTCCCTGTTGGCCGTAGGCCTTGCGCTGCCTAGGCTGCGCCCGCAACATCCGCTCcaca > 2:1313603/1‑150 (MQ=255) tttCGAGCACCCGTAGAACCGTTTCAAGTGAAAGGTGGTGATCAAGGAGGCAGATACTTCCGTAGAATTGTGCCAGCCGCAATGCCAATGGGTCCCTGTTAACAGTAGGCCTTGCGCTGCCTAGGCTGCGCCCGCAACATCCGCTCcaca > 2:535315/1‑150 (MQ=255) tAGAACCGTTTCAAGTGCAAGGTGGTGCTCAAGGAGGCAGATCCTTCCGTAGAATTGTGCCAGCCGCAATGCCAATGGGTCCCTGTTGGCCGTAGGCCTTGCGCTGCCTAGGCTGCGCCCGCAACATCCGCTCCACATTACCTGGACaga < 1:1047906/150‑1 (MQ=255) aaCCGTTTCAAGTGCAAGGTGGTGCTCAAGGAGGCAGATCCTTCCGTAGAATTGTGCCAGCCGCAATGCCAATGGGTCCCTGTTGGCCGTAGGCCTTGCGCTGCCTAGGCTGCGCCCGCAACATCCGCTCCACATTACCTGGACAGAGTg > 2:1522143/1‑150 (MQ=255) aaCCGTTTCAAGTGCAAGGTGGTGCTCAAGGAGGCAGATCCTTCCGTAGAATTGTGCCAGCCGCAATGCCAATGGGTCCCTGTTGGCCGTAGGCCTTGCGCTGCCTAGGCTGCGCCCGCAACATCCGCTCCACATTACCTGGACAGAGTg < 2:2374670/150‑1 (MQ=255) aaCCGTTTCAAGTGCAAGGTGGTGCTCAAGGAGGCAGATCCTTCCGTAGAATTGTGCCAGCCGCAATGCCAATGGGTCCCTGTTGGCCGTAGGCCTTGCGCTGCCTAGGCTGCGCCCGCAACATCCGCTCCACATTACCTGGACAGAGTg < 2:651009/150‑1 (MQ=255) aCCGTTTCAAGTGCAAGGTGGTGCTCAAGGAGGCAGATCCTTCCGTAGAATTGTGCCAGCCGCAATGCCAATGGGTCCCTGTTGGCCGTAGGCCTTGCGCTGCCTAGGCTGCGCCCGCAACATCCGCTCCACATTACCTGGACAGAGTgg < 1:1924706/150‑1 (MQ=255) ccGTTTCAAGTGCAAGGTGGTGCTCAAGGAGGCAGATCCTTCCGTAGAATTGTGCCAGCCGCAATGCCAATGGGTCCCTGTTGGCCGTAGGCCTTGCGCTGCCTAGGCTGCGCCCGCAACATCCGCTCCACATTACCTGGACAGAGTGGc > 2:1302982/1‑150 (MQ=255) tttCAAGTGCAAGGTGGTGCTCAAGGAGGCAGATCCTTCCGTAGAATTGTGCCAGCCGCAATGCCAATGGGTCCCTGTTGGCCGTAGGCCTTGCGCTGCCTAGGCTGCGCCCGCAACATCCGCTCCACATTACCTGGACAGAGTGGCCAt > 2:2288301/1‑150 (MQ=255) aaGTGCAAGGTGGTGCTCAAGGAGGCAGATCCTTCCGTAGAATTGTGCCAGCCGCAATGCCAATGGGTCCCTGTTGGCCGTAGGCCTTGCGCTGCCTAGGCTGCGCCCGCAACATCCGCTCCACATTACCTGGACAGAGTGGCCATcgcg > 1:1041958/1‑150 (MQ=255) ggtgCTCAAGGAGGCAGATCCTTCCGTAGAATTGTGCCAGCCGCAATGCCAATGGGTCCCTGTTGGCCGTAGGCCTTGCGCAGCCTAGGCAgcgcaa < 2:325682/97‑3 (MQ=255) ggtgCTCAAGGAGGCAGATCCTTCCGTAGAATTGTGCCAGCCGCAATGCCAATGGGTCCCTGTTGGCCGTAGGCCTTGCGCAGCCTAGGCAgcgcaa > 1:325682/1‑95 (MQ=255) tgCTCAAGGAGGCAGATCCTTCCGTAGAATTGTGCCAGCCGCAATGCCAATGGGTCCCTGTTGGCCGTAGGCCTTGCGCTGCCTAGGCTGCGCCCGCAACATCCGCTCCACATTACCTGGACAGAGTGGCCATCGCGAGAAAATGgctgc < 2:886622/150‑1 (MQ=255) tCAAGGAGGCAGATCCTTCCGTAGAATTGTGCCAGCCGCAATGCCAATGGGTCCCTGTTGGCCGTAGGCCTTGCGCTGCCTAGGCTGCGCCCGCAACATCCGCTCCACATTACCTGGACAGAGTGGCCATCGCGAGAAAATGGCTGCTca < 2:1615428/150‑1 (MQ=255) aaGGAGGCAGATCCTTCCGTAGAATTGTGCCAGCCGCAATGCCAATGGGTCCCTGTTGGCCGTAGGCCTTGCGCTGCCTAGGCTGCGCCCGCAACATCCGCTCCACATTACCTGGACAGAGTGGCCATCGCGAGAAAATGGCTGCTcaca < 2:1041958/150‑1 (MQ=255) aaGGAGGCAGATCCTTCCGTAGAATTGTGCCAGCCGCAATCGACCCGGGAACCCGGTAGTTTTAGGCCTTGCGCTGCCTAGGCTGCGCCCGCAACATCCGCTCCACATTACCTGGACAGAGTGGCCATCGCGAGAAAATGGCTGCTcaca < 2:63748/150‑1 (MQ=255) aggCAGATCCTTCCGTAGAATTGTGCCAGCCGCAATGCCAATGGGTCCCTGTTGGCCGTAGGCCTTGCGCTGCCTAGGCTGCGCCCGCAACATCCGCTCCACATTACCTGGACAGAGTGGCCATCGCGAGAAAATGGCTGCTCACAGAAc < 2:335472/150‑1 (MQ=255) ggCAGATCCTTCCGTAGAATTGTGCCAGCCGCAATGCCAATGGGTCCCTGTTGGCCGTAGGCCTTGCGCTGCCTAGGCTGCGCCCGCAACATCCGCTCCACATTACCTGGACAGAGTGGCCATCGCGAGAAAATGGCTGCTCACAGAACt < 1:1302982/150‑1 (MQ=255) gCAGATCCTTCCGTAGAATTGTGCCAGCCGCAATGCCAATGGGTCCCTGTTGGCCGTAGGCCTTGCGCTGCCTAGGCTGCGCCCGCAACATCCGCTCCACATTACCt < 2:1674657/107‑1 (MQ=255) gCAGATCCTTCCGTAGAATTGTGCCAGCCGCAATGCCAATGGGTCCCTGTTGGCCGTAGGCCTTGCGCTGCCTAGGCTGCGCCCGCAACATCCGCTCCACATTACCt > 1:1674657/1‑107 (MQ=255) gCAGATCCTTCCGTAGAATTGTGCCAGCCGCAATGCCAATGGGTCCCTGTTGGCCGTAGGCCTTGCGCTGCCTAGGCTGCGCCCGCAACATCCGCTCCACATTACCTGGACAGAGTGGCCATCGCGAGAAAATGGCTGCTCACAGAACTg > 1:1984129/1‑150 (MQ=255) gCAGATCCTTCCGTAGAATTGTGCCAGCCGCAATGCCAATGGGTCCCTGTTGGCCGTAGGCCTTGCGCTGCCTAGGCTGCGCCCGCAACATCCGCTCCACATTACCTGGACAGAGTGGCCATCGCGAGAAAATGGCTGCTCACAGAACTg > 1:358026/1‑150 (MQ=255) cAGATTCTTCCGTAGAATTGTGCCAGCCGCAATGCTAATTGTTCCCTGTTGGCTGTAGGCCTTGCGCTGCCTAGGCTGCGCCCGCAACATCCGCTCCACATTACCTGGACAGTGTGGCCATCGCGAGAAAATGGCTGCTCACAGAACTgg < 1:535315/150‑1 (MQ=255) ccTTCCGTAGAATTGTGCCAGCCGCAATGCCAATGGGTCCCTGTTGGCCGTAGGCCTTGCGCTGCCTAGGCTGCGCCCGCAACATCCGCTCCACATTACCTGGACAGAGTGGCCATCGCGAGAAAATGGCTGCTCACAGAACTGGCAGTa < 1:1110950/150‑1 (MQ=255) ctgccGTAGAATTGTGCCAGCCGCAATGCCAATGGGTCCCTGTTGGCCGTAGGCCTTGCGCTGCCTAGGCTGCGCACGAAACATCCGCTCCACATTACCTGGACAGAGTGGCCATCGCGAGAAAATGGCTGCTCACAGAACTGGCAGTAc < 1:1741728/147‑1 (MQ=255) ttCCGTAGAATTGTGCCAGCCGCAATGCCAATGGGTCCCTGTTGGCCGTAGGCCTTGCGCTGCCTAGGCTGCGCCCGCAACATCCGCTCCACATTACCTGGACAGAGTGGCCATCGCGAGAAAATGGCTGCTCACAGAACTGGCAGTACg > 2:772905/1‑150 (MQ=255) tCCGTAGAATTGTGCCAGCCGCAATGCCAATGGGTCCCTGTTGGCCGTAGGCCTTGCGCTGCCTAGGCTGCGCCCGCAACATCCGCTCCACATTACCTGGACAGAGTGGCCATCGCGAGAAAATGGCTGCTCACAGAACTGGCAGTACga < 1:2216135/150‑1 (MQ=255) ccGTAGAATTGTGCCAGCCGCAATGCCAATGGGTCCCTGTTGGCCGTAGGCCTTGCGCTGCCTAGGCTGCGCCCGCAACATCCGCTCCACATTACCTGGACAGAGTGGCCATCGCGAGAAAATGGCTGCTCACAGAACTGGCAGTACgag < 2:866736/150‑1 (MQ=255) cGTAGAATTGTGCCAGCCGCAATGCCAATGGGTCCCTGTTGGCCGTAGGCCTTGCGCTGCCTAGGCTGCGCCCGCAACATCCGCTCCACATTACCTGGACAGAGTGGCCATCGCGAGAAAATGGCTGCTCACAGAACTGGCAGTACgaga < 2:1189816/150‑1 (MQ=255) atcgtgCCAGCCGCAATGCCAATGGGTCCCTGTTGGCCGTAGGCCTTGCGCTGCCTAGGCTGCGCCCGCAACATCCGCTCCACATTACCAGGACAAAGTGGCCATCGCGAGAAAATGGCTGCTCACAGAACTGGCAGTACGAGAGCAAAt < 1:1313603/147‑1 (MQ=255) aTTGTGCCAGCCGCAATGCCAATGGGTCCCTGTTGGCCGTAGGCCTTGCGCTGAATCGTCTGCGCCCGCAACATCCGCTCCACATTACCTGGACAGAGTGGCCATCGCGAGAAAATGGCTGCTCACAGAACTGGCAGTACGAGAGCAAAt < 1:1834631/150‑1 (MQ=255) ccAGCCGCAATGCCAATGGGTCCCTGTTGGCCGTAGGCCTTGCGCTGCCTAGGCTGCGCCCGCAACATCCGCTCCACATTACCTGGACAGAGTGGCCATCGCGAGAAAATGGCTGCTCACAGAACTGGCAGTACGAGAGCAAATCGACGt > 1:392001/1‑150 (MQ=255) ccAGCCGCAATGCCAATGGGTCCCTGTTGGCCGTAGGCCTTGCGCTGCCTAGGCTGCGCCCGCAACATCCGCTCCACATTACCTGGACAGAGTGGCCATCGCGAGAAAATGGCTGCTCACAGAACTGGCAGTACGAGAGCAAATCGACGt > 2:2205372/1‑150 (MQ=255) cAGCCGCAATGCCAATGGGTCCCTGTTGGCCGTAGGCCTTGCGCTGCCTAGGCTGCGCTCGCAACATCCGCTCCACATTACCTGGACAGAGTg < 2:871542/93‑1 (MQ=255) cAGCCGCAATGCCAATGGGTCCCTGTTGGCCGTAGGCCTTGCGCTGCCTAGGCTGCGCCCGCAACATCCGCTCCACATTACCTGGACAGAGTg > 1:871542/1‑93 (MQ=255) cAGCCGCAATGCCAATGGGTCCCTGTTGGCCGTAGGCCTTGCGCTGCCTAGGCTGCGCCCGCAACATCCGCTCCACATTACCTGGACAGAGTGGCCATCGCGAGAAAATGGCTGCTCACAGAACTGGCAGTACGAGAGCAAATCGACGtt > 2:2229879/1‑150 (MQ=255) aGCCGCAATGCCAATGGGTCCCTGTTGGCCGTAGGCCTTGCGCTGCCTAGGCTGCGCCCGCAACATCCGCTCCACATTACCTGGACAGAGTGGCCATCGCGAGAAAATGGCTGCTCACAGAACTGGCAGTACGAGAGCAAATCGACGTtg < 2:2054227/150‑1 (MQ=255) gCCGCAATGCCAATGGGTCCCTGTTGGCCGTAGGCCTTGCGCTGCCTAGGCTGCGCCCGCAACATCCGCTCCACATTACCTGGACAGAGTGGCCATCGCGAGAAAATGGCTGCTCACAGAACTGGCAGTACGAGAGCAAATCGACGTtgt > 1:238815/1‑150 (MQ=255) aaTGCCAATGGGTCCCTGTTGGCCGTAGGCCTTGCGCTGCCTAGGCTGCGCCCGCAACATCCGCTCCACATTACCTGGACAGAGTGGCCATCGCGAGAAAATGGCTGCTCACAGAACTGGCAGTACGAGAGCAAATCGACGTTGTGCTTc > 2:1164424/1‑150 (MQ=255) ccAATGGGTCCCTGTTGGCCGTAGGCCTTGCGCTGCCTAGGCTGCGCCCGCAACATCCGCTCCACATTACCTGGACAGAGTGGCCATCGCGAGAAAATGGCTGCTCACAGAACTGGCAGTACGAGAGCAAATCGACGTTGTGCTTCgcgc > 1:227528/1‑150 (MQ=255) aaTGGGTCCCTGTTGGCCGTAGGCCTTGCGCTGCCTAGGCTGCGCCCGCAACATCCGCTCCACATTACCTGGACAGAGTGGCCATCGCGAGAAAATGGCTGCTCACAGAACTGGCAGTACGAGAGCAAATCGACGTTGTGCTTCGCGcac > 1:1227035/1‑150 (MQ=255) aTGGGTCCCTGTTGGCCGTAGGCCTTGCGCTGCCTAGGCTGCGCCCGCAACATCCGCTCCACATTACCTGGACAGAGTGGCCATCGCGAGAAAATGGCTGCTCACAGAACTGGCAGTACGAGAGCAAATCGACGTTGTGCTTCGCGcaca > 1:2328186/1‑150 (MQ=255) aTGGGTCCCTGTTGGCCGTAGGCCTTGCGCTGCCTAGGCTGCGACCGCAACATCCGCTCCACATAACCTGGTCGCAGTGGCCACTGTGATAAAATGGCTGATGACGGAACGGCCATTACGAGAGCAAATCGACGTTGTGCTTCGCGcaca < 2:274902/150‑1 (MQ=255) acccTGTTGGCCGTAGGCCTTGCGCTGCCTAGGCTGCGCCCGCAACATCCGCTCCACATTACCTGGACAGAGTGGCCATcgc > 2:1044415/2‑82 (MQ=255) acccTGTTGGCCGTAGGCCTTGCGCTGCATAGGCTTCGCCCGCAACATCCGCTCCACATTACCTGGACAGAGTGGCCATcgc < 1:1044415/81‑1 (MQ=255) ccTGTTGGCCGTAGGCCTTGCGCTGCCTAGGCTGCGCCCGCAACATCCGCTCCACATTACCTGGACAGAGTGGCCATCGCGAGAAAATGGCTGCTCACAGAACTgg < 1:309636/106‑1 (MQ=255) ccTGTTGGCCGTAGGCCTTGCGCTGCCTAGGCTGCGCCCGCAACATCCGCTCCACATTACCTGGACAGAGTGGCCATCGCGAGAAAATGGCTGCTCACAGAACTgg > 2:309636/1‑106 (MQ=255) ttGGCCGTAGGCCTTGCGCTGCCTAGGCTGCGCCCGCAACATCCGCTCCACATTACCTGGACAGAGTGGCCATCGCGAGAAAATGgct > 1:1822706/1‑88 (MQ=255) ttGGCCGTAGGCCTTGCGCTGCCTAGGCTGCGCCCGCAACATCCGCTCCACATTACCTGGACAGAGTGGCCATCGCGAGAAAATGgct < 2:1822706/88‑1 (MQ=255) ttGGCCGTAGGCCTTGCGCTGCCTAGGCTGCGCCCGCAACATCCGCTCCACATTAACTACAACGAGTCGCAATGGCTAGATCATTGGTTCGGACAGTTGTGGGAGTACGAGTGTAAATTGACGGTGTGCTTCGCGCACACAGTTACAtgt < 2:275084/150‑1 (MQ=255) gTAGGCCTTGCGCTGCCTAGGCTGCGCCCGCAACATCCGCTCCACATTACCTGGACAGAGTGGCCATCGCGAGAAAATGGCTGCTCACAGAACTGGCAGTACGAGAGCAAATCGACGTTGTGCTTCGCGCACACAGTTACATGTGGGTGa < 1:2205372/150‑1 (MQ=255) aGGCCTTGCGCTGACTAGGCTGCGCCCGCAACATCCGCTCCACATTACCTGGACAGAGTGGCCATCGCGAGAAAATGGCTGCTCACAGAACTGGCAGTACGAGAGCAAATCGACGTTGTGCTTCGCGCACACAGTTACATGGGGGTGAAg < 2:437267/150‑1 (MQ=255) ttgcgggcgcAGCCTAGGCAGCGCCCGCAACATCCGCTCCACATTACCTGGACAGAGTGGCCATCGCGAGAAAATGGCTGCTCACAGAACTGGCAGTACGAGAGCAAATCGACGTTGTGCTTCGCGCACACAGTTACATGTGGGTGAAGa > 1:2408473/7‑150 (MQ=255) gCCTTGCGCTGCCTAGGCTGCGCCCGCAACATCCGCTCCACATTACCTGGACAGAGTGGCCATCGCGAGAAAATGGCTGCTCACAGAACTGGCAGTACGAGAGCAAATCGACGTTGTGCTTCGCGCACACAGTTACATGTGGGTGAAGAc > 2:2149871/1‑150 (MQ=255) gcgggcgcAGCCTAGGCAGCGCCCGCAACATCCGCTCCACATTACCTGGACAGAGTGGCCATCGCGAGAAAATGGCTTCTCACAGAACTgg < 2:593816/87‑1 (MQ=255) gcgggcgcAGCCTAGGCAGCGCCCGCAACATCCGCTCCACATTACCTGGACAGAGTGGCCATCGCGAGAAAATGGCTGCTCACAGAACTgg > 1:593816/5‑91 (MQ=255) cTTGCGCTGCCTAGGCTGCGCCCGCAACATCCGCTCCACATTAc > 2:1873579/1‑44 (MQ=255) cTTGCGCTGCCTAGGCTGCGCCCGCAACATCCGCTCCACATTAc < 1:1873579/44‑1 (MQ=255) cTTGCGCTGCCTAGGCTGCGCCCGCAACATCCGCTCCACATTACCTGGACAGAGTGGCCATCGCGAGAAAATGGCTGCTCACAGAACTGGCAGTACGAGAGCAAATCGACGTTGTGCTTCGCGCACACAGTTACATGTGGGTGAAGACGt > 2:1082684/1‑150 (MQ=255) ttGCGCTGCCTAGGCTGCGCCCGCAACATCCGCTCCACATTACCTGGACAGAGTGGCCATCGCGAGAAAATGGCTGCTCACAGAACTGGCAGTACGAGAGCAAATCGACGTTGTGCTTCGCGCACACAGTTACATGTGGGTGAAGACGTc < 1:2149871/150‑1 (MQ=255) ccTAGGCTGCGCCCGCAACATCCGCTCCACATTACCTGGACAGAGTGGCCATCGCgag > 1:880927/1‑58 (MQ=255) ccTAGGCTGCGCCCGCAACATCCGCTCCACATTACCTGGACAGAGTGGCCATCGCgag < 2:880927/58‑1 (MQ=255) ccTAGGCTGCGCCCGCAACATCCGCTCCACATTACCTGGACAGAGTGGCCATCGCGAGAAAATGGCTGCTCACAGAACTGGCAGTACGAGAGCAAATCGACGTTGTGCTTCGCGcaca < 2:169029/118‑1 (MQ=255) ccTAGGCTGCGCCCGCAACATCCGCTCCACATTACCTGGACAGAGTGGCCATCGCGAGAAAATGGCTGCTCACAGAACTGGCAGTACGAGAGCAAATCGACGTTGTGCTTCGCGcaca > 1:169029/1‑118 (MQ=255) tAGGCTGCGCCCGCAACATCCGCTCCACATTACCTGGACAGAGTGGCCATCGCGAGAAAATGGCTGCTCACAGAACTGGCGGTACAAGAGCAAATCGACGTTGTGCTTCGCGCACACAGTTACATGTGGGTGAAGACGTCGCCAATAaga > 1:1620497/1‑150 (MQ=255) tAGGCTGCGCCCGCAACATCCGCTCCACATTACCTGGACAGAGTGGCCATCGCGAGAAAATGGCTGCTCACAGAACTGGCAGTACGAGAGCAAATCGACGTTGTGCTTCGCGCACACAGTTACATGTGGGTGAAGACGTCGCCAATAaga < 2:238815/150‑1 (MQ=255) aGGCTGCGCCCGCAACATCCGCTCCACATTACCTGGACAGAGTGGCCATCGCGAGAAAATGGCTGCTCACAGAACTGGCAGTACGAGAGCAAATCGACGTTGTGCTTCGCGCACACAGTTACATGTGGGTGAAGACGTCGCCAATAagag < 2:358026/150‑1 (MQ=255) gCTGCGCCCGCAACATCCGCTCCACATTACCTGGACAGAGTGGCCATCGCGAGAAAATGGCTGCTCACAGAACTGGCAGTAc > 2:679147/1‑82 (MQ=255) gCTGCGCCCGCAACATCCGCTCCACATTACCTGGACAGAGTGGCCATCGCGAGAAAATGGCTGCTCACAGAACTGGCAGTAc < 1:679147/82‑1 (MQ=255) tGCGCCCGCAACATCCGCTCCACATTACCTGGACAGAGTGGCCATCGCGAGAAAATGGCTGCTCACAGAACTGGCAGTACGAGAGCAAATCGACGTTGTGCTTCGCGCACACAGTTACATGTGGGTGAAGACGTCGCCAATAAGAGTAAc > 1:1733101/1‑150 (MQ=255) | GTCTATGTTTTTTAGTTTGCTTTCGAGCACCCGTAGAACCGTTTCAAGTGCAAGGTGGTGCTCAAGGAGGCAGATCCTTCCGTAGAATTGTGCCAGCCGCAATGCCAATGGGTCCCTGTTGGCCGTAGGCCTTGCGCTGCCTAGGCTGCGCCCGCAACATCCGCTCCACATTACCTGGACAGAGTGGCCATCGCGAGAAAATGGCTGCTCACAGAACTGGCAGTACGAGAGCAAATCGACGTTGTGCTTCGCGCACACAGTTACATGTGGGTGAAGACGTCGCCAATAAGAGTAAC > NC_002947/6169700‑6169995 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |