| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 6,180,715 | A→T | 10.1% | I263N (ATC→AAC) | atpB ← | ATP synthase subunit a |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 6,180,715 | 0 | A | T | 10.1% | 262.7 / 14.3 | 87 | I263N (ATC→AAC) | atpB | ATP synthase subunit a |
| Reads supporting (aligned to +/- strand): ref base A (42/36); new base T (3/6); total (45/42) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.04e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CCTTGCGGACTTTTTAAGCCCTCCCCCCGTACAGGCAGGGAAGGCTATCAGACACGCCAGGCGGTCTTAATGGTTATCTTCGTGAGCCATCGACAGGTAGACGATGGTCAGCATCATGAAGATGAAAGCTTGCAGGGTGATGATCAGGATGTGGAACACAGCCCACGCCCATTGCAGCACCACACCCAGGCCGCTGAGCCACAGCAGGCCGGAGCCGAACATTACAGC‑GATCAGGATGAACACCAGCTCGCCAGCATACATGTTGCCGAACAGACGCAGTGCCAGCGAGATCGGCTTG > NC_002947/6180567‑6180864 | ccTTGCGGACTTTTTAAGCCCTCCCCCCGTACAGGCAGGGAAGGCTATCAGACACGCCAGGCGGTCTTAATGGTTATCTTCGTGAGCCATCGACAGGTAGACGATGGTCAGCATCATGAAGATGAAAGCTTGCAGGGTGATGATCAGGAt > 1:662698/1‑150 (MQ=255) tgACTTTTTAAGCCCTCCCCCCGTACAGGCAGGGAAGGCTATCAGACACGCCAGGCGGTCTTAATGGTTATCTTCGTGAGCCATCGACAGGTAGACGATGGTCAGCATCATGAAGATGAAAGCTTGCAGGGTGATGATCAGGATGTGGaa < 2:514351/149‑1 (MQ=255) ggACTTTTTAAGCCCTCCCCCCGTACAGGCAGGGAAGGCTATCAGACACGCCAGGCGGTCTTAATGGTTATCTTCGTGAGCCGTCGACAGGTAGACGATGGTCAGCATCATGAAGATGAAAGCTTGCAGGGTGATGATCAGGATGTGGaa < 1:700323/150‑1 (MQ=255) ggACTTTTTAAGCCCTCCCCCCGTACAGGCAGGGAAGGCTATCAGACACGCCAGGCGGTCTTAATGGTTATCTTCGTGAGCCATCGACAGGTAGACGATGGTCAGCATCATGAAGATGAAAGCTTGCAGGGTGATGATCAGGATGTGGaa < 2:1941314/150‑1 (MQ=255) gACTTTTTAAGCCCTCCCCCCGTACAGGCAGGGAAGGCTATCAGACACGCCAGGCGGTCTTAATGGTTATCTTCGTGAGCCATCGACAGGTAGACGATGGTCAGCATCATGAAGATGAAAGCTTGCAGGGTGATGATCAGGATGTGGAac > 2:795667/1‑150 (MQ=255) tttttAAGCCCTCCCCCCGTACAGGCAGGGAAGGCTATCAGACACGCCAGGCGGTCTTAATGGTTATCTTCGTGAGCCATCGACAGGTAGACGATGGTCAGCATCATGAAGATGAAAGCTTGCAGGGTGATGATCAGGATGTGGAAcaca > 2:48178/1‑150 (MQ=255) tttttAAGCCCTCCCCCCGTACAGGCAGGGAAGGCTATCAGACACGCCAGGCGGTCTTAATGGTTATCTTCGTGAGCCATCGACAGGTAGACGATGATCAGCATCATGAAGATGAAAGCTTGCAGGGTGATGATCAGGATGTGGAAcaca > 2:1100345/1‑150 (MQ=255) ttAAGCCCTCCCCCCGTACAGGCAGGGAAGGCTATCAGACACGCCAGGCGGTCTTAATGGTTATCTTCGTGAGCCATCGACAGGTAGACGATGGTCAGCATCATGAAGATGAAAGCTTGCAGGGTGATGATCAGGATGTGGAACACAGcc < 2:662698/150‑1 (MQ=255) cccccGTACAGGCAGGGAAGGCTATCAGACACGCCAGGCGGTCTTAATGGTTATCTTCGTGAGCCATCGACAGGTAGACGATGGTCAGCATCATGAAGATGAAAGCTTGCAGGGTGATGATCAGGATGTGGAACACAGCCCACGCCCAtt > 1:1548438/1‑150 (MQ=255) ccccGTACAGGCAGGGAAGGCTATCAGACACGCCAGGCGGTCTCCATGATTGCTTTAGTCCGCCTGCAAGTCGTGCACCAAGTTCAGCGGGAGGAAGATGAAAGCGTGGAGGGTGATGATCAGGATGTGGAACACAGCCCACGCCCATTg < 2:1477796/150‑1 (MQ=255) tACAGGCAGGGAAGGCTATCAGACACGCCAGGCGGTCTTAATGGTTATCTTCGTGAGCCATCGACAGGTAGACGATGGTCAGCATCATGAAGATGAAAGCTTGCAGGGTGATGATCAGGATGTGGAACACAGCCCACGCCCATTgcagca < 1:818666/150‑1 (MQ=255) aggcaggGAAGGCTATCAGACACGCCAGGCGGTCTTAATGGTTATCTTCGTGAGCCATCGACAGGTAGACGATGGTCAGCATCATGAAGATGAAAGCTTGCAGGGTGATGATCAGGATGTGGAACACAGCCCACGCCCATTGCAGcacca > 1:1585201/1‑150 (MQ=255) gggAAGGCTATCAGACACGCCAGGCGGTCTTAATGGTTATCTTCGTGAGCCATCGACAGGTAGACGATGGTCAGCATCATGAAGATGAAAGCTTGCAGGGTGATGATCAGGATGTGGAACACAGCCCACGCCCATTGCAGCACCACAccc < 2:1252879/150‑1 (MQ=255) gggAAGGCTATCAGACACGCCAGGCGGTCTTAATGGTTATCTTCGTGAGCCATCGACAGGTAGACGATGGTCAGCATCATGAAGATGAAAGCTTGCAGGGTGATGATCAGGATGTGGAACACAGCCCACGCCCATTGCAGCACCACAccc < 2:1585201/150‑1 (MQ=255) ggAAGGCTATCAGACACGCCAGGCGGTCTTAATGGTTATCTTCGTGAGCCATCGACAGGTAGACGATGGTCAGCATCATGAAGATGAAAGCTTGCAGGGTGATGATCAGGATGTGGAACACAGCCCACGCCCATTGCAGCACCACACCCa > 2:2040049/1‑150 (MQ=255) tCAGACACGCCAGGCGGTCTTAATGGTTATCTTCGTGAGCCATCGACAGGTAGACGATGGTCAGCATCATGAAGATGAAAGCTTGCAGGGTGATGATCAGGATGTGGAACACAGCCCACGCCCATTGCAGCACCACACCCAGGCCGCTGa > 2:1607039/1‑150 (MQ=255) acacGCCAGGCGGTCTTAATGGTTATCTTCGTGAGCCATCGACAGGTAGACGATGGTCAGCATCATGAAGATGAAAGCTTGCAGGGTGATGATCAGGAt < 1:1733844/99‑1 (MQ=255) acacGCCAGGCGGTCTTAATGGTTATCTTCGTGAGCCATCGACAGGTAGACGATGGTCAGCATCACGAAGATGAAAGCTTGCAGGGTGATGATCAGGAt > 2:1733844/1‑99 (MQ=255) gCCAGGCGGTCTTAATGGTTATCTTCGTGAGCCATCGACAGGTAGACGATGGTCAGCATCATGAAGATGAAAGCTTGCAGGGTGATGATCAGGATGTGGAACACAGCCCACGCCCATTGCAGCACCACACCCAGGCCGCTGAGCCAcagc > 1:152931/1‑150 (MQ=255) aGGCGGTCTTAATGGTTATCTTCGTGAGCCATCGACAGGTAGACGATGGTCAGCATCATGAAGATGAAAGCTTGCAGGGTGATGATCAGGATGTGGAACACAGCCCACGCCCATTGCAGCACCACACCCAGGCCGCTGAGCCACAGCAgg > 1:820290/1‑150 (MQ=255) ggCGGTCTTAATGGTTATCTTCGTGAGCCATCGACAGGTAGACGATGGTCAGCATCATGAAGATGAAAGCTTGCAGGGTGATGATCAGGATGTGGAACACAGCCCACGCCCATTGCAGCACCACACCCAGGCCGCTGAGCCACAGCAGGc < 1:2040049/150‑1 (MQ=255) gTCTTAATGGTTATCTTCGTGAGCCATCGACAGGTAGACGATGGTCAGCATCATGAAGATGAAAGCTTGCAGGGTGATGATCAGGATGTGGAACACAGCCCACGCCCATTGCAGCACCACACCCAGGCCGCTGAGCCACAGCAGGCCGGa < 2:441225/150‑1 (MQ=255) gTCTTAATGGTTATCTTCGTCAGCCATCGACAGGTAGACGATGGTCAGCATCATGAAGATGAAAGCTTGCAGGGTGATGATCAGGATGTGGAACACAGCTCACGCCCATTGCAGCACCACACCCAGGCCGCTGAGCCACAGCAGGCCGGa < 1:795667/150‑1 (MQ=255) cTTAATGGTTATCTTCGTGAGCCATCGACAGGTAGACGATGGTCAGCATCATGAAGATGAAAGCTTGCAGGGTGATGATCAGGATGTGGAACACAGCCCACGCCCATTGCAGCACCACACCCAGGCCGCTGAGCCACAGCAGGCCGGAGc < 1:742179/150‑1 (MQ=255) ttAATGGTTATCTTCGTGAGCCATCGACAGGTAGACGATGGTCAGCATCATGAAGATGAAAGCTTGCAGGGTGATGATCAGGATGTGGAACACAGCCCACGCCCATTGCAGCACCACACCCAGGCCGCTGAGCCACAGCAGGCCGGAGcc > 1:596049/1‑150 (MQ=255) ggTTATCTTCGTGAGCCATCGACAGGTAGACGATGGTCAGCATCATGAAGATGAAAGCTTGCAGGGTGATGATCAGGATGTGGAACACAGCCCACGCCCATTGCAGCACCACACCCAGGCCGCTGAGCCACAGCAGGCCGGAGCCGAACa > 1:1957440/1‑150 (MQ=255) ttCGTGAGCCATCGACAGGTAGACGATGGTCAGCATCATGAAGATGAAAGCTTGCAGGGTGATGATCAGGTTGTGGAACACAGCCCACGCCCATTGCAGCACCACACCCAGGCCGCTGAGCCACAGCAGGCCGGAGCCGAACATTACAGc < 1:1370194/150‑1 (MQ=255) ttCGTGAGCCATCGACAGGTAGACGATGGTCAGCATCATGAAGATGAAAGCTTGCAGGGTGATGATCAGGTTGTGGAACACAGCCCACGCCCATTGCAGCACCACACCCAGGCCGCTGAGCCACAGCAGGCCGGAGCCGAACATTACAGc > 2:2325258/1‑150 (MQ=255) gTGAGCCATCGACAGGTAGACGATGGTCAGCATCATGAAGATGAAAGCTTGCAGGGTGATGATCAGGATGTGGAACACAGCCCACGCCCATTGCAGCACCACACCCAGGCCGCTGAGCCAcagcag < 2:1092684/126‑1 (MQ=255) gTGAGCCATCGACAGGTAGACGATGGTCAGCATCATGAAGATGAAAGCTTGCAGGGTGATGATCAGGATGTGGAACACAGCCCACGCCCATTGCAGCACCACACCCAGGCCGCTGAGCCAcagcag > 1:1092684/1‑126 (MQ=255) gTGAGCCATCGACAGGTAGACGATGGTCAGCATCATGAAGATGAAAGCTTGCAGGGTGATGATCAGGATGTGGAACACAGCCCACGCCCATTGCAGCACCACACCCAGGCCGCTGAGCCACAGCAGGCCGGAGCCGaa > 2:1613883/1‑138 (MQ=255) gTGAGCCATCGACAGGTAGACGATGGTCAGCATCATGAAGATGAAAGCTTGCAGGGTGATGATCAGGATGTGGAACACAGCCCACGCCCATTGCAGCACCACACCCAGGCCGCTGAGCCACAGCAGGCCGGAGCCGaa < 1:1613883/138‑1 (MQ=255) aGCCATCGACAGGTAGACGATGGTCAGCATCATGAAGATGAAAGCTTGCAGGGTGAGGATCAGGATGTGGAACACAGCCCACGCCCATTGCAGCACCACACCCAGGCCGCTGAGCCACAGCAGGCCGGAGCCGAACATTACAGC‑GATCAg > 2:141906/1‑150 (MQ=255) caaTCGACAGGTAGACTATGTTCAGCATCATGAAGATGAAAGCTTGCAGGGTGATGATCAGGATGTGGAACACAGCCCACGCCCATTGCAGCACCACACCCAGGCCGCTGAGCCACAGCAGGCCGGAGCCGAACATTACAGC‑GATCAGGa < 2:622553/148‑1 (MQ=255) cATCGACAGGTAGACGATGGTCAGCATCATGAAGATGAAAGCTTGCAGGGTGATGATCAGGATGTGGAACACAGCCCACGCCCATTGCAGCACCACACCCAGGCCGCTGAGCCACAGCAGGCCGGAGCCGAACATTACAGC‑GATCAGGAt > 1:2053478/1‑150 (MQ=255) aGGTAGACGATGGTCAGCATCATGAAGATGAAAGCTTGCAGGGTGATGATCAGGATGTGGAAcaca > 1:587681/1‑66 (MQ=255) aGGTAGACGATGGTCAGCATCATGAAGATGAAAGCTTGCAGGGTGATGATCAGGATGTGGAAcaca < 2:587681/66‑1 (MQ=255) ggTAGACGATGGTCAGCATCATGAAGATGAAAGCTTGCAGGGTGATGATCAGGATGTGGAACACAGCCCACGCCCATTGCAGCACCACACCCAGGCCGCTGAGCCACAGCAGGCCGGAGCCGAACATTACAGC‑GATCAGGATGAACACCa > 2:787621/1‑150 (MQ=255) gTAGACGATGGTCAGCATCATGAAGATGAAAGCTTGCAGGGTGATGATCAGGATGTGGAACACAGCCCACGCCCATTGCAGCACCACACCCAGGCCGCTGAGCCACAGCAGGCCGGAGCCGAACATTACAGC‑GATCAGGATGAACACCAg < 2:1146887/150‑1 (MQ=255) gATGGTCAGCATCATGAAGATGAAAGCTTGCAGGGTGATGATCAGGTTGTGGAACACAGCCCACGCCCATTGCAGCACCACACCCAGGCCGCTGAGCCACAGCAGGCCGGAGCCGAACATTACAGC‑GATCAGGATGaa > 2:1624196/1‑138 (MQ=255) gATGGTCAGCATCATGAAGATGAAAGCTTGCAGGGTGATGATCAGGTTGTGGAACACAGCCCACGCCCATTGCAGCACCACACCCAGGCCGCTGAGCCACAGCAGGCCGGAGCCGAACATTACAGC‑GATCAGGATGaa < 2:1941543/138‑1 (MQ=255) gATGGTCAGCATCATGAAGATGAAAGCTTGCAGGGTGATGATCAGGTTGTGGAACACAGCCCACGCCCATTGCAGCACCACACCCAGGCCGCTGAGCCACAGCAGGCCGGAGCCGAACATTACAGC‑GATCAGGATGaa > 1:1941543/1‑138 (MQ=255) gATGGTCAGCATCATGAAGATGAAAGCTTGCAGGGTGATGATCAGGTTGTGGAACACAGCCCACGCCCATTGCAGCACCACACCCAGGCCGCTGAGCCACAGCAGGCCGGAGCCGAACATTACAGC‑GATCAGGATGaa < 1:1624196/138‑1 (MQ=255) gATGGTCAGCATCATGAAGATGAAAGCTTGCAGGGTGATGATCAGGATGTGGAACACAGCCCACGCCCATTGCAGCACCACACCCAGGCCGCTGAGCCACAGCAGGCCGGAGCTGAACATTACAGC‑GATCAGGATGAACACCAGCTCGcc > 2:571907/1‑150 (MQ=255) gATGGTCAGCATCATGAAGAAGAAAACTTGCAGGGTGATGATCAGCATGTGGAACACAACCCAAGCCCATAGCAGCACGACACCCAGGCCCCTGAGCCACAGCAGGCAGTAGCCGAACATTCCAGC‑GCTAAGGATGAACACCATATCGcc > 2:516869/1‑150 (MQ=255) aTGGTCAGCATCATGAAGATGAAAGCTTGCAGGGTGATGATCAGGATGTGGAACACAGCCCACGCCCATTGCAGCACCACACCCAGGCCGCTGAGCCACAGCAGGCCGGAGCCGAACATTACAGC‑GATCAGGATGAACACCAGCTCGCCa < 2:1957440/150‑1 (MQ=255) aGCATCATGAAGATGAAAGCTTGCAGGGTGATGATCAGGTTGTGGAACACAGCCCACGCCCATTGCAGCACCACACCCAGGCCGCTGAGCCACAGCAGGCCGGAGCCGAACATTACAGC‑GATCAGGATGAACACCAGCTCGCCAGCATAc < 1:401298/150‑1 (MQ=255) aGCATCATGAAGATGAAAGCTTGCAGGGTGATGATCAGGATGTGGAACACAGCCCACGCCCATTGCAGCACCACACCCAGGCCGCTGa < 2:1583516/88‑1 (MQ=255) aGCATCATGAAGATGAAAGCTTGCAGGGTGATGATCAGGATGTGGAACACAGCCCACGCCCATTGCAGCACCACACCCAGGCCGCTGa > 1:1583516/1‑88 (MQ=255) gCATCATGAAGATGAAAGCTTGCAGGGTGATGATCAGGATGTGGAACACAGCCCACGCCCATTGCAGCACCACACCCAGGCCGCTGAGCCACAGCAGGCCg > 1:1922841/1‑101 (MQ=255) gCATCATGAAGATGAAAGCTTGCAGGGTGATGATCAGGATGTGGAACACAGCCCACGCCCATTGCAGCACCACACCCAGGCCGCTGAGCCACAGCAGGCCg < 2:1922841/101‑1 (MQ=255) gCATCATGAAGATGAAAGCTTGCAGGGTGATGATCAGGATGTGGAACACAGCCCACGCCCATTGCAGCACCACACCCAGGCCGCTGAGCCACAGCAGGCCGGAGCCGAACATTACAGC‑GATCAGGATGAACACCAGCTCGCCAGCATACa > 2:181553/1‑150 (MQ=255) tcatGAAGATGAAAGCTTGCAGGGTGATGATCAGGATGTGGAACACAGCCCACGCCCATTGCAGCACCACACCCAGGcaga > 1:151169/1‑78 (MQ=255) tcatGAAGATGAAAGCTTGCAGGGTGATGATCAGGATGTGGAACACAGCCCACGCCCATTGCAGCACCACACCCAGGCCGc < 2:151169/81‑1 (MQ=255) tcatGAAGATGAAAGCTTGCAGGGTGATGATCAGGATGTGGAACACAGCCCACGCCCATTGCAGCACCACACCCAGGCCGCTGAGCCACAGCAGGCCGGAGCCGAACATTACAGC‑GATCAGGATGAACACCAGCTCGCCAGCAt < 1:1507684/144‑1 (MQ=255) tcatGAAGATGAAAGCTTGCAGGGTGATGATCAGGATGTGGAACACAGCCCACGCCCATTGCAGCACCACACCCAGGCCGCTGAGCCACAGCAGGCCGGAGCCGAACATTACAGC‑GATCAGGATGAACACCAGCTCGCCAGCAt > 2:1507684/1‑144 (MQ=255) tcatGAAGATGAAAGCTTGCAGGGTGATGATCAGGATGTGGAACACAGCCCACGCCCATTGCAGCACCACACCCAGGCCGCTGAGCCACAGCAGGCCGGAGCCGAACATTACAGC‑GATCAGGATGAACACCAGCTCGCCAGCATACATGt > 2:2161329/1‑150 (MQ=255) atGAAGATGAAAGCTTGCAGGGTGATGATCAGGATGTGGAACACAGCCCACGCCCATTgcagc < 2:1017458/63‑1 (MQ=255) atGAAGATGAAAGCTTGCAGGGTGATGATCAGGATGTGGAACACAGCCCACGCCCATTgcagc > 1:1017458/1‑63 (MQ=255) atGAAGATGAAAGCTTGCAGGGTGATGATCAGGATGTGGAACACAGCCCACGCCCATTGCAGCACCACACCCAGGCCGCTGAGCCACAGCAGGCCGGAGCCGAACATTACAGC‑GATCAGGATGAACACCAGCTCGCCAGCATACATGTTg > 1:1990506/1‑150 (MQ=255) atGAAGATGAAAGCTTGCAGGGTGATGATCAGGATGTGGAACACAGCCCACGCCCATTGCAGCACCACACCCAGGCCGCTGAGCCACAGCAGGCCGGAGCCGAACATTACAGC‑GATCAGGATGAACACCAGCTCGCCAGCATACATGTTg > 1:1262680/1‑150 (MQ=255) tGAAGATGAAAGCTTGCAGGGTGATGATCAGGATGTGGAACACAGCCCACGCCCATTGCAGCACCACACCCAGGCCGCTGAGCCACAGCAGGCCGGAGCCGAACATTACAGC‑GATCAGGATGAACACCAGCTCGCCAGCATACATGTTGc < 1:1100345/150‑1 (MQ=255) gAAGATGAAAGCTTGCAGGGTGATGATCAGGATGTGGAACACAGCCCACGCCCATTGCAGCACCACACCCAGGCCGCTGAGCCACAGCAGGCCGGAGCCGAACATTACAGC‑GATCAGGATGAACACCAGCTCGc > 2:2055139/1‑134 (MQ=255) gAAGATGAAAGCTTGCAGGGTGATGATCAGGATGTGGAACACAGCCCACGCCCATTGCAGCACCACACCCAGGCCGCTGAGCCACAGCAGGCCGGAGCCGAACATTACAGC‑GATCAGGATGAACACCAGCTCGc < 1:2055139/134‑1 (MQ=255) gATGAAAGCTTGCAGGGTGATGATCAGGATGTGGAACACAGCCCACGCCCATTGCAGCACCACACCCAGGCCGCTGAGCCACAGCAGGCCGGAGCCGAACATTACAGC‑GATCa > 2:515791/1‑113 (MQ=255) gATGAAAGCTTGCAGGGTGATGATCAGGATGTGGAACACAGCCCACGCCCATTGCAGCACCACACCCAGGCCGCTGAGCCACAGCAGGCCGGAGCCGAACATTACAGC‑GATCa < 1:515791/113‑1 (MQ=255) tGAAAGCTTGCAGGGTGATGATCAGGATGTGGAACACAGCCCACGCCCATTGCAGCACCACACCCAGGCCGCTGa < 2:1987942/75‑1 (MQ=255) tGAAAGCTTGCAGGGTGATGATCAGGATGTGGAACACAGCCCACGCCCATTGCAGCACCACACCCAGGCCGCTGa > 1:1987942/1‑75 (MQ=255) gAAAGCTTGCAGGGTGATGATCAGGATGTGGAACACAGCCCACGCCCATTGCAGCACCACACCCAGGCCGCTGAGCCACAGCAGGCCGGAGCCGAACATTACAGC‑GATCAGGATGAACACCAGCTCGCCAGCATACATGTTGCCGAACAg > 1:848760/1‑150 (MQ=255) aaaGCTTGCAGGGTGATGATCAGGATGTGGAACACAGCCCACGCCCATTGCAGCACCACACCCAGGCCGCTGAGCCACAGCAGGCCGGAGCCGAACATTACAGC‑GATCAGGATGAACACCAGCTCGCCAGCATACATGTTGCCGAACAGa > 1:1957416/1‑150 (MQ=255) aaGCTTGCAGGGTGATGATCAGGATGTGGAACACAGCCCACGCCCATTGCAGCACCACACCCAGGCCGCTGAGCCACAGCAGGCCGGAGCCGAACATTACAGC‑GATCAGGATCATTTTCAGCTCGCCAGCATACATGTTGCCGAACAGAc < 1:571907/150‑1 (MQ=255) ttGCAGGGTGATGATCAGGATGTGGAACACAGCCCACGCCCATTGCAGCACCACACCCAGGCCGCTGAGCCACAGCAGGCCGGAGCCGAACATTACAGC‑GATCAGGATGAACACCAGCTCGCCa > 2:1625451/1‑124 (MQ=255) ttGCAGGGTGATGATCAGGATGTGGAACACAGCCCACGCCCATTGCAGCACCACACCCAGGCCGCTGAGCCACAGCAGGCCGGAGCCGAACATTACAGC‑GATCAGGATGAACACCAGCTCGCCa < 1:1625451/124‑1 (MQ=255) ttGCAGGGTGATGATCAGGATGTGGAACACAGCCCACGCCCATTGCAGCACCACACCCAGGCCGCTGAGCCACAGCAGGCCGGAGCCGAACATTACAGC‑GATCAGGATGAACACCAGCTCGCCAGCATACATGTTGCCGAACAGACGCAg < 1:787621/150‑1 (MQ=255) cAGGGTGATGATCAGGTTGTGGAACACAGCCCACGCCCATTGCAGCACCACACCCAGGCCGCTGAGCCACAGCAGGCCGGAGCCGAACATTACAGC‑GATCAGGATGAACACCAGCTCGCCAGCATACATGTTGCCGAACAGACGCAGTGc < 1:517754/150‑1 (MQ=255) cAGGGTGATGATCAGGATGTGGAACACAGCCCACGCCCATTGCAGCACCACACCCAGGCCGCTGAGCCACAGCAGGCCGGAGCCGAACATTACAGC‑GATCAGGATGAACACCAGCTCGCCAGCATACATGTTGCCGAACAGACGCAGTGc < 2:1435789/150‑1 (MQ=255) gggTGATGATCAGGATGTGGAACACAGCCCACGCCCATTGCAGCACCACACCCAGGCCGCTGAGCCACAGCAGGCCGGAGCCGAACATTACAGC‑GATCAGGATGAACACCAGCTCGCCAGCATACATGTTGCCGAACAGACGCAGTGCCa < 2:1548438/150‑1 (MQ=255) ggTGATGATCAGGATGTGGAACACAGCCCACGCCCATTGCAGCACCACACCCAGGCCGCTGAGCCACAGCAGGCCGGAGCCGAACATTACAGC‑GATCAGGATGaa > 2:90252/1‑105 (MQ=255) ggTGATGATCAGGATGTGGAACACAGCCCACGCCCATTGCAGCACCACACCCAGGCCGCTGAGCCACAGCAGGCCGGAGCCGAACATTACAGC‑GATCAGGATGaa < 1:90252/105‑1 (MQ=255) ggatgatCAGGAGGTAGAACACAGCCCACGCCCATTGCAGCACGACACCCAGGCCGCTGAGCCACAGCACGCCGGAGCCGAACATTACAGC‑GATGAGGATGAACACCAGCCCGCCAGCATACATGTTGCCGAACAAACTCAAGGCCAGCg > 2:672779/2‑150 (MQ=255) gatgatCAGGTTGTGGAACACAGCCCACGCCCATTGCAGCACCACACCCAGGCCGCTGAGCCACAGCAGGCCGGAGCCGAACATTACAGC‑GATCAGGATGAACACCAGCTCGCCAGCATACATGTCGCCGAACAGACGCAGTGCCAGCga < 1:1359675/150‑1 (MQ=255) gatCAGGATGTGGAACACAGCCCACGCCCATTGCAGCACCACACCCAGGCCGCTGAGCCACAGCAGGCCGGAGCCGAA‑ATGAAAACGGATTAGGATGAACACCAGCTCGCCAGCATACATGTTGCCGAACAGACGCAGTGCCAGCGAGAt > 1:419515/1‑150 (MQ=255) atCAGGATGTGGAACACAGCCCACGCCCATTGCAGCACCACACCCAGGCCGCTGAGCCACAGCAGGCCGGAGCCGAACATTACAGC‑GATCAGGATGAACACCAGCTCGCCAGCATACATGTTGCCGAACAGACGCAGTGCCAGCGAGATc < 1:48178/150‑1 (MQ=255) ggATGTGGAACACAGCCCACGCCCATTGCAGCACCACACCCAGGCCGCTGAGCCACAGCAGGCCGGAGCCGAACATTACAGC‑GATCAGGATGAACACCAGCTCg > 2:395665/1‑104 (MQ=255) ggATGTGGAACACAGCCCACGCCCATTGCAGCACCACACCCAGGCCGCTGAGCCACAGCAGGCCGGAGCCGAACATTACAGC‑GATCAGGATGAACACCAGCTCg < 1:395665/104‑1 (MQ=255) ggATGTGGAACACAGCCCACGCCCATTGCAGCACCACACCCAGGCCGCTGAGCCACAGCAGGCCGGAGCCGAACATTACAGC‑GATCAGGATGAACACCAGCTCGCCAGCATACATGTTGCCGAACAGACGCAGTGCCAGCGAGATCGGCt > 1:2194257/1‑150 (MQ=255) ggATGTGGAACACAGCCCACGCCCATTGCAGCACCACACCCAGGCCGCTGAGCCACAGCAGGCCGGAGCCGAACATTACAGC‑GATCAGGATGAACACCAGCTCGCCAGCATACATGTTGCCGAACAGACGCAGTGCCAGCGAGATCGGCt > 1:132392/1‑150 (MQ=255) aTGTGGAACACAGCCCACGCCCATTGCAGCACCACACCCAGGCCGCTGAGCCACAGCAGGCCGGAGCCGAACATTACAGC‑GATCAGGATGAACACCAGCTCGCCAGCATACATGTTGCCGAACAGACGCAGTGCCAGCGAGATCGGCTTg < 2:596049/150‑1 (MQ=255) | CCTTGCGGACTTTTTAAGCCCTCCCCCCGTACAGGCAGGGAAGGCTATCAGACACGCCAGGCGGTCTTAATGGTTATCTTCGTGAGCCATCGACAGGTAGACGATGGTCAGCATCATGAAGATGAAAGCTTGCAGGGTGATGATCAGGATGTGGAACACAGCCCACGCCCATTGCAGCACCACACCCAGGCCGCTGAGCCACAGCAGGCCGGAGCCGAACATTACAGC‑GATCAGGATGAACACCAGCTCGCCAGCATACATGTTGCCGAACAGACGCAGTGCCAGCGAGATCGGCTTG > NC_002947/6180567‑6180864 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |