BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_002947	592,816	G→C	7.1%	G184A (GGC→GCC)	PP_0503 →	MFS transporter

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	592,816	0	G	C	7.1%	357.6 / 15.5	112	G184A (GGC→GCC)	PP_0503	MFS transporter
Reads supporting (aligned to +/- strand): ref base G (52/52); new base C (5/3); total (57/55)
Fisher's exact test for biased strand distribution p-value = 7.17e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.77e-01

Only 100 of 114 total aligned reads displayed.

CACCGTCACCAGTGGTGTGGTGCTGGGTATTCTGCTGGCACGGCTGGCTTCGGGCGGGCTGGCCGACCTGGCCGGTTGGCGGAGTGTGTACCTGGCTTCCGCAGGGCTGTTGATGTTGCTGGCGCTGGTGCTGTGGCGCAGTCTGCCCGGCGGGCAGCCGATGGGGATCCGGCCGGGTTACCGGGCGCTGATCGT‑GGCCCAGTTCAGCTTGTATCGGCACGACCGGTTGCTGCGCCAGCGCGGTGTGTTCGGTGTGTTGATCTTCGCCGCATTCAGCGTGCTGTGGAGTGCCATGG  >  NC_002947/592667‑592962

cACCGTCACCAGTGGTGTGGTGCTGGGTATTCTGCTGGCACGGCTGGCTTCGGGCGGGCTGGCCGACCTGGCCGGTTGGCGGAGTGTGTACCTGGCTTCCGCAGGGCTGTTGATGTTGCTGGCGCTGGTGCTGTGGCGCAGTCTGCCcgg                                                                                                                                                     <  2:1776607/150‑1 (MQ=255)

 aCCGTCACCAGTGGTGTGGTGCTGGGTATTCTGCTGCCCGCGCTGGCTTCGGGCGGGCTGGCCGACCTGGCCGGTTGGCGGAGTGTGTACCTGGCTTCCGCAGGGCTGTTGATGTTGCTGGCGCTGGTGCTGTGGCGCAGTCTGCCcggc                                                                                                                                                    <  1:635269/150‑1 (MQ=255)

    gTCACCAGTGGTGTGGTGCTGGGTATTCTGCTGGCACGGCTGGCTTCGGGCGGGCTGGCCGACCTGGCCGGTTGGCGGAGTGTGTACCTGGCTTCCGCAGGGCTGTTGATGTTGCTGGCGCTGGTGCTGTGGCGCAGTCTGCCCGGCggg                                                                                                                                                 >  2:1502577/1‑150 (MQ=255)

    gTCACCAGTGGTGTGGTGCTGGGTATTCTGCTGGCACGGCTGGCTTCGGGCGGGCTGGCCGACCTGGCCGGTTGGCGGAGTGTGTACCTGGCTTCCGCAGGGCTGTTGATGTTGCTGGCGCTGGTGCTGTGGCGCAGTCTGCCCGGCggg                                                                                                                                                 >  1:889354/1‑150 (MQ=255)

      cACCAGTGGTGTGGTGCTGGGTATTCTGCTGGCACGGCTGGCTTCGGGCGGGCTGGCCGACCTGGCCGGTTGGCGGAGTGTGTACCTGGCTTCCGCAGGGCTGTTGATGTTGCTGGCGCTGGTGCTGTGGCGCAGTCTGCCCGGCGGGCa                                                                                                                                               <  1:492182/150‑1 (MQ=255)

        ccAGTGGTGTGGTGCTGGGTATTCTGCTGGCACGGCTGGCTTCGGGCGGGCTGGCCGACCTGGCCGGTTGGCGGAGTGTGTACCTGGCTTCCGCAGGGCTGTTGATGTTGCTGGCGCTGGTGCTGTGGCGCAGTCTGCCCGGCGGGCAGc                                                                                                                                             <  1:1470612/150‑1 (MQ=255)

         cAGTGGTGTGGTGCTGGGTATTCTGCTGGCACGGCTGGCTTCGGGCGGGCTGGCCGACCTGGCCGGTTGGCGGAGTGTGTACCTGGCTTCCGCAGGGCTGTTGATGTTGCTGGCGCTGGTGCTGTGGCGCAGTCTGCCCGGCGGGCAGcc                                                                                                                                            <  2:1682044/150‑1 (MQ=255)

         cAGTGGTGTGGTGCTGGGTATTCTGCTGGCACGGCTGGCTTCGGGCGGGCTGGCCGACCTGGCCGGTTGGCGGAGTGTGTACCTGGCTTCCGCAGGGCTGTTGATGTTGCTGGCGCTGGTGCTGTGGCGCAGTCTGCCCGGCGGGCAGcc                                                                                                                                            >  1:916791/1‑150 (MQ=255)

              gtgtggtgCTGGGTATTCTGCTGGCACGGCTGGCTTNGGGNGGGCTGGCCGACCTGGCCGGTTGGCGGAGTGTGTACCTGGCTTCCGCAGGGCTGTTGCTGGTGCTGTCGCTGGTGCTGTGGCGCAGTCTGCCCGGCGGGCAGCCGATgg                                                                                                                                       <  2:2143319/150‑1 (MQ=255)

              gtgtggtgCTGGGTATTCTGCTGGCACGGCTGGCTTCGGGCGGGCTGGCCGACCTGGCCGGTTGGCGGAGTGTGTACCTGGCTTCCGCAGGGCTGTTGATGTTGCTGGCGCTGGTGCTGTGGCGCAGTCTGCCCGGCGGGCAGCCGATgg                                                                                                                                       <  1:1985886/150‑1 (MQ=255)

              gtgtggtgCTGGGTATTCTGCTGGCACGGCTGGCTTCGGGCGGGCTGGCCGACCTGGCCGGTTGGCGGAGTGTGTACCTGGCTTCCGCAGGGCTGTTGATGTTGCTGGCGCTGGTGCTGTGGCGCAGTCTGCCCGGCGGGCAGCCGATgg                                                                                                                                       <  1:2325804/150‑1 (MQ=255)

              gtgtggtgCTGGGTATTCTGCTGGCACGGCTGGCTTCGGGCGGGCTGGCCGACCTGGCCGGTTGGCGGAGTGTGTACCTGGCTTCCGCAGGGCTGTTGATGTTGCTGGCGCTGGTGCTGTGGCGCAGTCTGCCCGGCGGGCAGCCGATgg                                                                                                                                       <  1:803492/150‑1 (MQ=255)

               tgtggtgCTGGGTATTCTGCTGGCACGGCTGGCTTCGGGCGGGCTGGCCGACCTGGCCGGTTGGCGGAGTGTGTACCTGGCTTCCGCAGGGCTGTTGATGTTGCTGGCGCTGGTGCTGTGGCGCAGTCTGCCCGGCGGGCAGCCGATggg                                                                                                                                      <  2:2360831/150‑1 (MQ=255)

                     tccgactATTCTGCTGGCACGGCTGGCTTCGGGCGGGCTGGCCGACCTGGCCGGTTGGCGGAGTGTGTACCTGGCTTCCGCAGGGCTGTTGATGTTGCTGGCGCTGGTGCTGTGGCGCAGTCTGCCCGGCGGGCAGCCGATGGGGATccg                                                                                                                                <  1:1905308/144‑1 (MQ=255)

                       tGGGTATTCTGCTGGCACGGCTGGCTTCGGGCGGGCTGGCCGACCTGGCCGGTTGGCGGAGTGTGTACCTGGCTTCCGCAGGGCTGTTGATGTTGCTGGCGCTGGTGCTGTGGCGCAGTCTGCCCGGCGGGCAGCCGATGGGGATccggc                                                                                                                              >  1:1728686/1‑150 (MQ=255)

                        gggTATTCTGCTGGCACGGCTGGCTTCGGGCGGGCTGGCCGACCTGGCCGGTTGGCGGAGTGTGTACCTGGCTTCCGCAGGGCTGTTGATGTTGCTGGCGCTGGTGCTGTGGCGCAGTCTGCCCGGCGGGCAGCCGATGGGGATccggcc                                                                                                                             <  2:916791/150‑1 (MQ=255)

                          gTATTCTGCTGGCACGGCTGGCTTCGGGCGGGCTGGCCGACCTGGCCGGTTGGCGGAGTGTGTACCTGGCTTCCGCAGGGCTGTTGATGTTGCTGGCGCTGGTGCTGTGGCGCAGTCTGCCCGGCGGGCAGCCGATGGGGATccggccgg                                                                                                                           <  1:2265133/150‑1 (MQ=255)

                           tATTCTGCTGGCACGGCTGGCTTCGGGCGGGCTGGCCGACCTGGCCGGTTGGCGGAGTGTGTACCTGGCTTCCGCAGGGCTGTTGATGTTGCTGGCGCTGGTGCTGTGGCGCAGTCTGCCTGGCGGGCAGCCGATGGGGATCCGGCCggg                                                                                                                          >  1:939162/1‑150 (MQ=255)

                            aTTCTGCTGGCACGGCTGGCTTCGGGCGGGCTGGCCGACCTGGCCGGTTGGCGGAGTGTGTACCTGGCTTCCGCAGGGCTGTTGATGTTGCTGGCGCTGGTGCTGTGGCGCAGTCTGCCCGGCGGGCAGCCGATGGGGATCCGGCCGGGt                                                                                                                         >  2:728991/1‑150 (MQ=255)

                              tCTGCTGGCACGGCTGGCTTCGGGCGGGCTGGCCGACCTGGCCGGTTGGCGGAGTGTGTACCTGGCTTCCGCAGGGCTGTTGATGTTGCTGGCGCTGGTGCTGTGGCGCAGTCTGCCCGGCGGGCAGCCGATGGGGATCCGGCCGGGTTa                                                                                                                       >  1:1812735/1‑150 (MQ=255)

                                tgctgGCACGGCTGGCTTCGGGCGGGCTGGCCGACCTGGCCGGTTGGCGGAGTGTGTACCTGGCTTCCGCAGGGCTGTTGATGTTGCTGGCGCTGGTGCTGTGGCGCAGTCTGCCCGGCGGGCAGCCGATGGGGATccggcc                                                                                                                             >  1:1340405/1‑142 (MQ=255)

                                tgctgGCACGGCTGGCTTCGGGCGGGCTGGCCGACCTGGCCGGTTGGCGGAGTGTGTACCTGGCTTCCGCAGGGCTGTTGATGTTGCTGGCGCTGGTGCTGTGGCGCAGTCTGCCCGGCGGGCAGCCGATGGGGATccggcc                                                                                                                             <  2:1340405/142‑1 (MQ=255)

                                  ctgGCACGGCTGGCTTCGGGCGGGCTGGCCGACCTGGCCGGTTGGCGGAGTGTGTACCTGGCTTCCGCAGGGCTGTTGATGTTGCTGGCGCTGGTGCTGTGGCGCAGTCTGCCCGGCGGGCAGCCGATGGGGATCCGGCCGGGTTACCgg                                                                                                                   <  2:939162/150‑1 (MQ=255)

                                     gCACGGCTGGCTTCGGGCGGGCTGGCCGACCTGGCCGGTTGGCGGAGTGTGTACCTGGCTTCCGCAGGGCTGTTGATGTTGCTGGCGCTGGTGCTGTGGCGCAGTCTGCCCGGCGGGCAGCCGATgg                                                                                                                                       <  1:2203547/127‑1 (MQ=255)

                                     gCACGGCTGGCTTCGGGCGGGCTGGCCGACCTGGCCGGTTGGCGGAGTGTGTACCTGGCTTCCGCAGGGCTGTTGATGTTGCTGGCGCTGGTGCTGTGGCGCAGTCTGCCCGGCGGGCAGCCGATgg                                                                                                                                       >  2:2203547/1‑127 (MQ=255)

                                     gCACGGCTGGCTTCGGGCGGGCTGGCCGACCTGGCCGGTTGGCGGAGTGTGTACCTGGCTTCCGCAGGGCTGTTGATGTTGCTGGCGCTGGTGCTGTGGCGCAGTCTGCCCGGCGGGCAGCCGATGGGGCTCCGGCCGGGTTACCGGgcg                                                                                                                >  2:849872/1‑150 (MQ=255)

                                     gCACGGCTGGCTTCGGGCGGGCTGGCCGACCTGGCCGGTTGGCGGAGTGTGTACCTGGCTTCCGCAGGGCTGTTGATGTTGCTGGCGCTGGTGCTGTGGCGCAGTCTGCCCGGCGGGCAGCCGATGGGGATCCGGCCGGGTTACCGGgcg                                                                                                                <  1:728991/150‑1 (MQ=255)

                                     gCACGGCTGGCTTCGGGCGGGCTGGCCGACCTGGCCGGTTGGCGGAGTGTGTACCTGGCTTCCGCAGGGCTGTTGATGTTGCTGGCGCTGGTGCTGTGGCGCAGTCTGCCCGGCGGGCAGCCGATGGGGATCCGGCCGGGTTACCGGgcg                                                                                                                <  1:1502577/150‑1 (MQ=255)

                                     gCACGGCTGGCTTCGGGCGGGCTGGCCGACCTGGCCGGTTGGCGGAGTGTGTACCTGGCTTCCGCAGGGCTGTTGATGTTGCTGGCGCTGGTGCTGTGGCGCAGTCTGCCCGGCGGGCAGCCGATGGGGATCCGGCCGGGTTACCGGgcg                                                                                                                >  2:1969027/1‑150 (MQ=255)

                                         ggctggctTCGGGCGGGCTGGCCGACCTGGCCGGTTGGCGGAGTGTGTACCTGGCTTCCGCAGGGCTGTTGATGTTGCTGGCGCTGGTGCTGTGGCGCAGTCTGCCCGGCGGGCAGCCGATGGGGATCCGGCCGGGTTACCGGGCGCTGa                                                                                                            >  1:1438262/1‑150 (MQ=255)

                                          gctggctTCGGGCGGGCTGGCCGACCTGGCCGGTTGGCGGAGTGTGTACCTGGCTTCCGCAGGGCTGTTGATGTTGCTGGCGCTGGTGCTGTGGCGCAGTCTGCCCGGCGGGCAGCCGATGGGGATCCGGCCGGGTTACCGGGCGCTGAt                                                                                                           >  1:11771/1‑150 (MQ=255)

                                              gctTCGGGCGGGCTGGCCGACCTGGCCGGTTGGCGGAGTGTGTACCTGGCTTCCGCAGGGCTGTTGATGTTGCTGGCGCTGGTGCTGTGGCGCAGTCTGCCCGGCGGGCAGCCGATGGGGATCCGGCCGGGTTACCGGGCGCTGATCGT‑g                                                                                                      <  2:11771/150‑1 (MQ=255)

                                               ctTCGGGCGGGCTGGCCGACCTGGCCGGTTGGCGGAGTGTGTACCTGGCTTCCGCAGGGCTGTTGATGTTGCTGGCGCTGGTGCTGTGGCGCAGTCTGCCCGGCGGGCAGCCGATGGGGATCCGGCCGGGTTACCGGGCGCTGATCGT‑gg                                                                                                     <  2:1812735/150‑1 (MQ=255)

                                               ctTCGGGCGGGCTGGCCGACCTGGCCGGTTGGCGGAGTGTGTACCTGGCTTCCGCAGGGCTGTTGATGTTGCTGGCGCTGGTGCTGTGGCGCAGTCTGCCCGGCGGGCAGCCGATGGGGATCCGGCCGGGTTACCGGGCGCTGATCGT‑g                                                                                                      >  1:2037734/1‑149 (MQ=255)

                                               ctTCGGGCGGGCTGGCCGACCTGGCCGGTTGGCGGAGTGTGTACCTGGCTTCCGCAGGGCTGTTGATGTTGCTGGCGCTGGTGCTGTGGCGCAGTCTGCCCGGCGGGCAGCCGATGGGGATCCGGCCGGGTTACCGGGCGCTGATCGT‑g                                                                                                      <  2:2037734/149‑1 (MQ=255)

                                                ttCGGGCGGGCTGGCCGACCTGGCCGGTTGGCGGAGTGTGTACCTGGCTTCCGCAGGGCTGTTGATGTTGCTGGCGCTGGTGCTGTGGCGCAGTCTGCCCGGCGGGCAGCCGATGGGGATCCGGCCGGGTTACCGGGCGCTGATCGT‑GGc                                                                                                    <  2:1636786/150‑1 (MQ=255)

                                                     gcgggcTGGCCGACCTGGCCGGTTGGCGGAGTGTGTACCTGGCTTCCGCAGGGCTGTTGATGTTGCTGGCGCTGGTGCTGTGGCGCAGTCTGCCCGGCGGGCAGCCGATGGGGATCCGGCCGGGTTACCGGGCGCTGATCGT‑GGCCCAGt                                                                                               <  2:1438262/150‑1 (MQ=255)

                                                             gCCGACCTGGCCGGTTGGCGGAGTGTGTACCTGGCTTCCGCAGGGCTGTTGATGTTGCTGGCGCTGGTGCTGTGGCGCAGTCTGCCCGGCGGGCAGCCGATGGGGATCCGGCCGGGTTACCGGGCGCTGATCGT‑GGCCCAGTTCa                                                                                            >  2:721224/1‑145 (MQ=255)

                                                             gCCGACCTGGCCGGTTGGCGGAGTGTGTACCTGGCTTCCGCAGGGCTGTTGATGTTGCTGGCGCTGGTGCTGTGGCGCAGTCTGCCCGGCGGGCAGCCGATGGGGATCCGGCCGGGTTACCGGGCGCTGATCGT‑GGCCCAGTTCa                                                                                            <  1:721224/145‑1 (MQ=255)

                                                             gCCGACCTGGCCGGTTGGCGGAGTGTGTACCTGGCTTCCGCAGGGCTGTTGATGTTGCTGGCGCTGGTGCTGTGGCGCAGTCTGCCCGGCGGGCAGCCGATGGGGATCCGGCCGGGTTACCGGGCGCTGATCGT‑GGCCCAGTTCAGCTTg                                                                                       >  1:1321265/1‑150 (MQ=255)

                                                               cGACCTGGCCGGTTGGCGGAGTGTGTACCTGGCTTCCGCAGGGCTGTTGATGTTGCTGGCGCTGGTGCTGTGGCGCAGTCTGCCCGGCGGGCAGCCGATGGGGATccggc                                                                                                                              >  1:714862/1‑110 (MQ=255)

                                                               cGACCTGGCCGGTTGGCGGAGTGTGTACCTGGCTTCCGCAGGGCTGTTGATGTTGCTGGCGCTGGTGCTGTGGCGCAGTCTGCCCGGCGGGCAGCCGATGGGGATccggc                                                                                                                              <  2:714862/110‑1 (MQ=255)

                                                                     ggCCGGTTGGCGGAGTGTGTACCTGGCTTCCGCAGGGCTGTTGATGTTGCTGGCGCTGGTGCTGTGGCGCAGTCTGCCCGGCGGGCAGCCGATGGGGATCCGGCCGGGTTACCGGGCGCTGATCGT‑GGCCCAGTTCAGCt                                                                                         >  2:112664/1‑140 (MQ=255)

                                                                     ggCCGGTTGGCGGAGTGTGTACCTGGCTTCCGCAGGGCTGTTGATGTTGCTGGCGCTGGTGCTGTGGCGCAGTCTGCCCGGCGGGCAGCCGATGGGGATCCGGCCGGGTTACCGGGCGCTGATCGT‑GGCCCAGTTCAGCt                                                                                         <  1:112664/140‑1 (MQ=255)

                                                                        cGGTTGGCGGAGTGTGTACCTGGCTTCCGCAGGGCTGTTGATGTTGCTGGCGCTGGTGCTGTGGCGCAGTCTGCCCGGCGGGCAGCCGATGGGGATCCGGCCGGGTTACCGGGCGCTGATCGT‑GGCCCAGTTCAGCTTGTATCGGCACGa                                                                            >  1:1962459/1‑150 (MQ=255)

                                                                           ttGGCGGAGTGTGTACCTGGCTTCCGCAGGGCTGTTGATGTTGCTGGCGCTGGTGCTGTGGCGCAGTCTGCCCGGCGGGCAGCCGATGGGGATCCGGCCGGGTTACCGGGCGCTGATCGT‑GGCCCAGTTCAGCTTGTATCGGCACGACCg                                                                         <  2:2090104/150‑1 (MQ=255)

                                                                              gCGGAGTGTGTACCTGGCTTCCGCAGGGCTGTTGATGTTGCTGGCGCTGGTGCTGTGGCGCAGTCTGCCCGGCGGGCAGCCGATGGGGATCCGGCCGGGTTACCGGGCGCTGATCGT‑GGCCCAGTTCAGCTTGTATCGGCACGACCg                                                                         >  2:1852224/1‑147 (MQ=255)

                                                                              gCGGAGTGTGTACCTGGCTTCCGCAGGGCTGTTGATGTTGCTGGCGCTGGTGCTGTGGCGCAGTCTGCCCGGCGGGCAGCCGATGGGGATCCGGCCGGGTTACCGGGCGCTGATCGT‑GGCCCAGTTCAGCTTGTATCGGCACGACCg                                                                         <  1:1852224/147‑1 (MQ=255)

                                                                                ggAGTGTGTACCTGGCTTCCGCAGGGCTGTTGATGTTGCTGGCGCTGGTGCTGTGGCGCAGTCTGCCCGGCGGGCAGCCGATGGGGATCCGGCCggg                                                                                                                          <  1:1537324/97‑1 (MQ=255)

                                                                                ggAGTGTGTACCTGGCTTCCGCAGGGCTGTTGATGTTGCTGGCGCTGGTGCTGTGGCGCAGTCTGCCCGGCGGGCAGCCGATGGGGATCCGGCCGGGTTACCGGGCGCTGATCGT‑GGCCCAGTTCAGCTTGTATCGGCACGACCGGTtgc                                                                    >  2:1652121/1‑150 (MQ=255)

                                                                                 gAGTGTGTACCTGGCTTCCGCAGGGCTGTTGATGTTGCTGGCGCTGGTGCTGTGGCGCAGTCTGCCCGGCGGGCAGCCGATGGGGATCCGGCCGGGTTACCGGGCGCTGATCGT‑GGCCCAGCGCATCTTGTATCGGCACGACCGGTtgct                                                                   <  1:64661/150‑1 (MQ=255)

                                                                                   gtgtgtACCTGGCTTCCGCAGGGCTGTTGATGTTGCTGGCGCTGGTGCTGTGGCGCAGTCTGCCCGGCGGGCAGCCGATGGGGATCCGGCCGGGTTACCGGGCGCTGATCGT‑GGCCCAGTTCAGCTTGTATCGGCACGACCGGTtgctgc                                                                 <  1:1316320/150‑1 (MQ=255)

                                                                                        tACCTGGCTTCCGCAGGGCTGTTGATGTTGCTGGCGCTGGTGCTGTGGCGCAGTCTGCCCGGCGGGCAGCCGATGGGGATCCGGCCGGGTTACCGGGCGCTGATCGT‑GGCCCAGTTCAGCTTGTATCGGCACGACCGGt                                                                       >  2:802818/1‑139 (MQ=255)

                                                                                        tACCTGGCTTCAGCAGGGCTGTTGATGTTGCTGGCGCTGGTGCTGTGGCGCAGTCTGGCCGGCGGGCAGCCGATGGGGATCCGGCCGGGTTACCGGGCGCTGATCGT‑GGGCCAGTTCAGCTTGGATCGGCACGACCGGTTGCTGCGcccg                                                            >  2:149400/1‑148 (MQ=255)

                                                                                          ccTGGCTTCCGCAGGGCTGTTGATGTTGCTGGCGCTGGTGCTGTGGCGCAGTCTGCCCGGCGGGCAGCCGATGGGGATCCGGCCGGGTTACCGGGCGCTGATCGT‑GGCCCAGTTCAGCTTGTATCGGCACGACCGGTTGCTGCGCCAgcg                                                          >  2:2138680/1‑150 (MQ=255)

                                                                                          ccTGGCTTCCGCAGGGCTGTTGATGTTGCTGGCGCTGGTGCTGTGGCGCAGTCTGCCCGGCGGGCAGCCGATGGGGATCCGGCCGGGTTACCGGGCGCTGATCGT‑GGCCCAGTTCAGCTTGTATCGGCACGACCGGTTGCTGCGCCAgcg                                                          >  1:1122439/1‑150 (MQ=255)

                                                                                           cTGGCTTCCGCAGGGCTGTTGATGTTGCTGGCGCTGGTGCTGTGGCGCAGTCTGCCCGGCGGGCAGCCGATGGGGCGCTGGCCGGGTTAACGGGCGATGA‑CGTATGCCGTGTTCTGCTTGTATCGGCACGACCGGTTGCTGCGCCAgcgc                                                         >  1:1142160/1‑150 (MQ=255)

                                                                                           cTGGCTTCCGCAGGGCTGTTGATGTTGCTGGCGCTGGTGCTGTGGCGCAGTCTGCCCGGCGGGCAGCCGATGGGGATCCGGCCGGGTTACCGGGCGCTGATCGT‑GGCCCAGTTCAGCTTGTAt                                                                                    >  1:796713/1‑123 (MQ=255)

                                                                                           cTGGCTTCCGCAGGGCTGTTGATGTTGCTGGCGCTGGTGCTGTGGCGCAGTCTGCCCGGCGGGCAGCCGATGGGGATCCGGCCGGGTTACCGGGCGCTGATCGT‑GGCCCAGTTCAGCTTGTAt                                                                                    <  2:796713/123‑1 (MQ=255)

                                                                                           cTGGCTTCCGCAGGGCTGTTGATGTTGCTGGCGCTGGTGCTGTGGCGCAGTCTGCCCGGCGGGCAGCCGATGGGGATCCGGCCGGGTTACCGGGCGCTGATCGT‑GGCCCAGGTCAGCTTGTATCGGCACGACCGGTTGCTGCGCCAgcgc                                                         >  1:1332839/1‑150 (MQ=255)

                                                                                            tGGCTTCCGCAGGGCTGTTGATGTTGCTGGCGCTGGTGCTGTGGCGCAGTCTGCCCGGCGGGCAGCCGATGGGGATCCGGCCGGGTTACCGGGCGCTGATCGT‑GGCCCAGTTCAGCTTGTATCGGCACGACCGGTTGCTGCGCCAGcgcg                                                        <  2:1266049/150‑1 (MQ=255)

                                                                                            tGGCTTCCGCAGGGCTGTTGATGTTGCTGGCGCTGGTGCTGTGGCGCAGTCTGCCCGGCGGGCAGCCGATGGGGATCCGGCCGGGTTACCGGGCGCTGATCGT‑GGCCCAGTTCAGCTTGTATCGGCACGACCGGTTGCTGCGCCAGcgcg                                                        <  1:1652121/150‑1 (MQ=255)

                                                                                                ttCCGCAGGGCTGTTGATGTTGCTGGCGCTGGTGCTGTGGCGCAGTCTGCCCGGCGGGCAGCCGATGGGGATCCGGCCGGGTTACCGGGCGCTGATCGT‑GGCCCAGTTGAGCTTGTATCGGCACGACCGGTTGCTGCGCCAGCGcggtgt                                                    >  1:2001264/1‑150 (MQ=255)

                                                                                                ttCCGCAGGGCTGTTGATGTTGCTGGCGCTGGTGCTGTGGCGCAGTCTGCCCGGCGGGCAGCCGATGGGGATCCGGCCGGGTTACCGGGCGCTGATCGT‑GGCCCAGTTCAGCTTGTATCGGCACGACCGGTTGCTGCGCCAGCGcggtgt                                                    <  1:1743239/150‑1 (MQ=255)

                                                                                                ttCCGCAGGGCTGTTGATGTTGCTGGCGCTGGTGCTGTGGCGCAGTCTGCCCGGCGGGCAGCCGATGGGGATCCGGCCGGGTTACCGGGCGCTGATCGT‑GGCCCAGTTCAGCTTGTATCGGCACGACCGGTTGCTGCGCCAGCGcggtgt                                                    >  1:1097001/1‑150 (MQ=255)

                                                                                                   cGCAGGGCTGTTGATGTTGCTGGCGCTGGTGCTGTGGCGCAGTTTGTCGAGGGTTCAGCTGATGGTGATCCGGCCGGGTTACCGGGCGCTGATCGT‑GGCCCAGTTCCGCTTGTCTCGGCACGCCCGGTTGCTGCGCCAGCGcggtgtgtt                                                 <  2:1728686/150‑1 (MQ=255)

                                                                                                   cGCAGGGCTGTTGATGTTGCTGGCGCTGGTGCTGTGGCGCAGTCTGCCCGGCGGGCAGCCGATGGGGATCCGGCCGGGTTACCGGGCGCTGATCGT‑GGCCCAGTTCAGCTTGTATCGGCACGACCGGTTGCTGCGCCAGCGcggtgtgtt                                                 <  1:2283421/150‑1 (MQ=255)

                                                                                                    gCAGGGCTGTTGATGTTGCTGGCGCTGGTGCTGTGGCGCAGTCTGCCCGGCGGGCAGCCGATGGGGATCCGGCCGGGTTACCGGGCGCTGATCGT‑GGCCCAGTTCAGCTTGTATCGGCACGACCGGTTGCTGCGCCAGCGcggtgtgttc                                                >  1:47653/1‑150 (MQ=255)

                                                                                                       gggCTGTTGATGTTGCTGGCGCTGGTGCTGTGGCGCAGTCTGCCCGGCGGGCAGCCGATGGGGATCCGGCCGGGTTACCGGGCGCTGATCGT‑GGCCCAGTTCAGCTTGTATCGGCACGACCGGTTGCTGCGCCAGCGcggtgtgttcggt                                             <  1:1969027/150‑1 (MQ=255)

                                                                                                       gggCTGTTGATGTTGCTGGCGCTGGTGCTGTGGCGCAGTCTGCCCGGCGGGCAGCCGATGGGGATCCGGCCGGGTTACCGGGCGCTGATCGT‑GGCCCAGTTCAGCTTGTATCGGCACGACCGGTTGCTGCGCCAGCGcggtgt                                                    <  2:1513450/143‑1 (MQ=255)

                                                                                                       gggCTGTTGATGTTGCTGGCGCTGGTGCTGTGGCGCAGTCTGCCCGGCGGGCAGCCGATGGGGATCCGGCCGGGTTACCGGGCGCTGATCGT‑GGCCCAGTTCAGCTTGTATCGGCACGACCGGTTGCTGCGCCAGCGcggtgt                                                    >  1:1513450/1‑143 (MQ=255)

                                                                                                           tGTTGATGTTGCTGGCGCTGGTGCTGTGGCGCAGTCTGCCCGGCGGGCAGCCGATGGGGATCCGGCCGGGTTACCGGGCGCTGATCGT‑GGCCCAGTTCAGCTTGTATCGGCACGACCGGTTGCTGCGCCAGCGcggtgtgttcggtgtgt                                         >  1:107282/1‑150 (MQ=255)

                                                                                                            gTTGATGTTGCTGGCGCTGGTGCTGTGGCGCAGTCTGCCCGGCGGGCAGCCGATGGGGATCCGGCCGGGTTACCGGGCGCTGATCGT‑GGCCCAGTTCAGCTTGTATCGGCACGACCGGTTGCTGCGCCAGCGcggtgtgttcggtgtgtt                                        <  2:47653/150‑1 (MQ=255)

                                                                                                               gATGTTGCTGGCGCTGGTTCTGTGGCGCAGTCTGCCCGGCGGGCAGCCGATGGGGATCCGGCCGGGTTACCGGGCGCTGATCGT‑GGCCCAGTTCAGCTTGTATCGGCACGACCGGTTGCTGCGCCAGCGCGGTGTGTTCGGTGTGTTGAt                                     >  1:1399237/1‑150 (MQ=255)

                                                                                                                   ttGCTGGCGCTGGTGCTGTGGCGCAGTCTGCCCGGCGGGCAGCCGATGGGGATCCGGCCGGGTTACCGGGCGCTGATCGT‑GGCCCAGTTCAGCTTGTATCGGCACGACCGGTTGCTGCGCCAGCGCGGTGTGTTCGGTGTGTTGATCTTc                                 >  1:2178117/1‑150 (MQ=255)

                                                                                                                    tGCTGGCGCTGGTGCTGTGGCGCAGTCTGCCCGGCGGGCAGCCGATGGGGATCCGGCCGGGTTACCGGGCGCTGATCGT‑GGCCCAGTTCAGCTTGTATCGGCACGACCGGTTGCTGCGCCAGCGcggtgtgttcggtgtgtt                                        <  2:325969/142‑1 (MQ=255)

                                                                                                                    tGCTGGCGCTGGTGCTGTGGCGCAGTCTGCCCGGCGGGCAGCCGATGGGGATCCGGCCGGGTTACCGGGCGCTGATCGT‑GGCCCAGTTCAGCTTGTATCGGCACGACCGGTTGCTGCGCCAGCGcggtgtgttcggtgtgtt                                        >  1:325969/1‑142 (MQ=255)

                                                                                                                     gCTGGCGCTGGTGCTGTGGCGCAGTCTGCCCGGCGGGCAGCCGATGGGGATCCGGCCGGGTTACCGGGCGCTGATCGT‑GGCCCAGTTCAGCTTGTATCGGCACGACCGGTTGCTGCGCCAGCGCGGTGTGTTCGGTGTGTTGATCTTcgc                               <  1:947516/150‑1 (MQ=255)

                                                                                                                       tGGCGCTGGTGCTGTGGCGCAGTCTGCCCGGCGGGCAGCCGATGGGGATCCGGCCGGGTTACCGGGCGCTGATCGT‑GGCCCa                                                                                                 <  2:1814689/82‑1 (MQ=255)

                                                                                                                       tGGCGCTGGTGCTGTGGCGCAGTCTGCCCGGCGGGCAGCCGATGGGGATCCGGCCGGGTTACCGGGCGCTGATCGT‑GGCCCa                                                                                                 >  1:1814689/1‑82 (MQ=255)

                                                                                                                         gcgcTGGTGCTGTGGCGCAGTCTGCCCGGCGGGCAGCCGATGGGGATCCGGCCGGGTTACCGGGCGCTGATCGT‑GGCCCAGTTCAGCTTGTATCGGCACGACCGGTTGCTGCGCCAGCGcggt                                                      >  1:365318/1‑123 (MQ=255)

                                                                                                                         gcgcTGGTGCTGTGGCGCAGTCTGCCCGGCGGGCAGCCGATGGGGATCCGGCCGGGTTACCGGGCGCTGATCGT‑GGCCCAGTTCAGCTTGTATCGGCACGACCGGTTGCTGCGCCAGCGcggt                                                      <  2:365318/123‑1 (MQ=255)

                                                                                                                             tGGTGCTGTGGCGCAGTCTGCCCGGCGGGCAGCCGATGGGGATCCGGCCGGGTTACCGGGCGCTGATCGT‑GGCCCAGTTCAGCTTGTATCGGCACGACCGGTTGCTGCGCTAGCGCGGTGTGTTCGGTGTGTTGATCTTCGCCGCATTCa                       >  1:775667/1‑150 (MQ=255)

                                                                                                                             tGGTGCTGTGGCGCAGTCTGCCCGGCGGGCAGCCGATGGGGATCCGGCCGGGTTACCGGGCGCTGATCGT‑GGCCCAGTTCAGCTTGTATCGGCACGACCGGTTGCTGCGCCAGCGCGGTGTGTTCGGTGTGTTGATCTTCGCCGCATTCa                       <  1:2138680/150‑1 (MQ=255)

                                                                                                                                    gtgGCGCAGTCTGCCCGGCGGGCAGCCGATGGGGATCCGGCCGGGTTACCGGGCGCTGATCGT‑GGCCCAGTTCAGCTTGTATCGGCACGACCGGTTGCTGCGCCAGCGCGGTGTGTTCGGTGTGTTGATCTTCGCCGCATTCAGCGTGCt                <  2:2001264/150‑1 (MQ=255)

                                                                                                                                       gcgcAGTCTGCCCGGCGGGCAGCCGATGGGGATCCGGCCGGGTTACCGGGCGCTGATCGT‑GGCCCAGTTCAGCTTGTATCGGCACGACCgg                                                                        >  1:1932397/1‑91 (MQ=255)

                                                                                                                                       gcgcAGTCTGCCCGGCGGGCAGCCGATGGGGATCCGGCCGGGTTACCGGGCGCTGATCGT‑GGCCCAGTTCAGCTTGTATCGGCACGACCgg                                                                        <  2:1932397/91‑1 (MQ=255)

                                                                                                                                       gcgcAGTCTGCCCGGCGGGCAGCCGATGGGGATCCGGCCGGGTTACCGGGCGCTGATCGT‑GGCCCAGTTCAGCTTGTATCGGCACGACCGGTTGCTGCGCCAGCGCGGTGTGTTCGGTGTGTTGATCTTCGCCGCATTCAGCGTGCtgtg             >  2:1786261/1‑150 (MQ=255)

                                                                                                                                       gcgcAGTCTGCCCGGCGGGCAGCCGATGGGGATCCGGCCGGGTTACCGGGCGCTGATCGT‑GGCCCAGTTCAGCTTGTATCGGCACGACCGGTTGCTGCGCCAGCGCGGTGTGTTCGGTGTGTTGATCTTCGCCGCATTCAGCGTGCtgtg             >  2:1224181/1‑150 (MQ=255)

                                                                                                                                        catcggcTGCCCGCCGGGCAGCCGATGGGGATCCGGCCGGGTTACCGGGCGCTGATCGT‑GGCCCAGTTCAGCTTGTATCGGCACGACCGGTTGCTGCGCCAGCGcggtgtgttcggtgtgt                                         >  2:2407519/7‑121 (MQ=255)

                                                                                                                                        catcggcTGCCCGCCGGGCAGCCGATGGGGATCCGGCCGGGTTACCGGGCGCTGATCGT‑GGCCCAGTTCAGCTTGTATCGGCACGACCGGTTGCTGCGCCAGCGcggtgtgttcggtgtgt                                         <  1:2407519/115‑1 (MQ=255)

                                                                                                                                        catcggcTGCCCGCCGGGCAGCCGATGGGGATCCGGCCGGGTTACCGGGCGCTGATCGT‑GGCCCAGTTCAGCTTGTATCGGCACGACCGGTTGCTGCGCCAGCGCGGTGTGTTCGGTGTGTTGATCTTCGCCGCATTCAGCGTGCTGTgg            >  2:875098/7‑150 (MQ=255)

                                                                                                                                         gcAGTCTGCCCGGCGGGCAGCCGATGGGGATCCGGCCGGGTTACCGGGCGCTGATCGT‑GGCCCAGTTCAGCTTGTATCGGCACGACCGGTTGCTGCGCCAGCGCGGTGTGTTCGGTGTGTTGATCTTCGCCGCATTCAGCGTGCTGTGGa           >  2:893816/1‑150 (MQ=255)

                                                                                                                                          tcggcTGCCCGCCGGGCAGCCGATGGGGATCCGGCCGGGTTACCGGGCGCTGATCGT‑GGCCCAGTTCAGCTTGTATCGGCACGACCGGTtgctgc                                                                 >  2:1597592/5‑95 (MQ=255)

                                                                                                                                          tcggcTGCCCGCCGGGCAGCCGATGGGGATCCGGCCGGGTTACCGGGCGCTGATCGT‑GGCCCAGTTCAGCTTGTATCGGCACGACCGGTtgctgc                                                                 <  1:1597592/91‑1 (MQ=255)

                                                                                                                                             tCTGCCCGGCGGGCAGCCGATGGGGATCCGGCCGGGTTACCGGGCGCTGATCGT‑GGCCCAGTTCAGCTTGTATCGGCACGACCGGTTGCTGCGCCAGCGCGGTGTGTTCGGTGTGTTGATCTTCGCCGCATTCAGCGTGCTGTGGAGTGc       >  2:254289/1‑150 (MQ=255)

                                                                                                                                             gcTGCCCGCCGGGCAGCCGATGGGGATCCGGCCGGGTTACCGGGCGCTGATCGT‑GGCCCAGTTCAGCTTGTATCGGCACGACCGGTtgctgc                                                                 >  2:1256387/2‑92 (MQ=255)

                                                                                                                                             gcTGCCCGCCGGGCAGCCGATGGGGATCCGGCCGGGTTACCGGGCGCTGATCGT‑GGCCCAGTTCAGCTTGTATCGGCACGACCGGTtgctgc                                                                 <  1:1256387/91‑1 (MQ=255)

                                                                                                                                                  ccGGCGGGCAGCCGATGGGGATCCGGCCGGGTTACCGGGCGCTGATCGT‑GGCCCAGTTCAGCTTGTATCGGCACGACCGGTTGCTGCGCCAGCGCGGTGTGTTCGGTGTGTTGATCTTcgc                               <  1:1244505/121‑1 (MQ=255)

                                                                                                                                                  ccGGCGGGCAGCCGATGGGGATCCGGCCGGGTTACCGGGCGCTGATCGT‑GGCCCAGTTCAGCTTGTATCGGCACGACCGGTTGCTGCGCCAGCGCGGTGTGTTCGGTGTGTTGATCTTCGCCGCATTCAGCGTGCTGTGGAGTGCCATgg  <  2:2178117/150‑1 (MQ=255)

CACCGTCACCAGTGGTGTGGTGCTGGGTATTCTGCTGGCACGGCTGGCTTCGGGCGGGCTGGCCGACCTGGCCGGTTGGCGGAGTGTGTACCTGGCTTCCGCAGGGCTGTTGATGTTGCTGGCGCTGGTGCTGTGGCGCAGTCTGCCCGGCGGGCAGCCGATGGGGATCCGGCCGGGTTACCGGGCGCTGATCGT‑GGCCCAGTTCAGCTTGTATCGGCACGACCGGTTGCTGCGCCAGCGCGGTGTGTTCGGTGTGTTGATCTTCGCCGCATTCAGCGTGCTGTGGAGTGCCATGG  >  NC_002947/592667‑592962

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`