| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 626,559 | T→G | 6.1% | K213Q (AAG→CAG) | dedA ← | inner membrane protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 626,559 | 0 | T | G | 6.1% | 278.5 / 7.0 | 91 | K213Q (AAG→CAG) | dedA | inner membrane protein |
| Reads supporting (aligned to +/- strand): ref base T (45/40); new base G (3/3); total (48/43) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 | |||||||||||
AGCGTCGCTGATGCCGTCCAGCATTGGCAG‑CCGCTCGCGTACGGCCTGCCATTGCTGTGGCGTGATCGGGTAACGCGCCAGAGTACGCTTGCGCCGCCAGGCGCTGAATGACCACATGCCGTTCGTTCTTTACCTGTTCAGTGAGCCTTGGCCGTACGGCCCAGGCGCCCACGCAGCAAGCCGAGAATCATCGGCACCAGCGACAGGATGATGATGCCCACCACCATCAGCGACAGGTGCTGCTTGATGAATGGCACGTTGCCGAAGAAGTAGCCCAAGGTGACCAGGCCGCCGACC > NC_002947/626411‑626707 | cgttacccgatcacgccaCAGCAATGGCAGGCCGTACGCGAGCGGC‑TGCCAATGCTGTGGCGTGATCGGGTAACGCGCCAGAGTACGCTTGCGCCGCCAGGCGCTGAATGACCACATGCCGTTCGTTCTTTACCTGTTCAGTGAGCCTTg > 2:445870‑M1/19‑150 (MQ=255) gCTGATGCCGTCCAGCATTGGCAG‑CCGCTCGCGTACGGCCTGCCATTGCTGTGGCGTGATCGGGTAACGCGCCAGAGTACGCTTGCGCCGCCAGGCGCTGAATGACCACATGCCGTTCGTTCTTTACCTGTTCAGTGAGCCTGGGCCGTa > 2:1596867/1‑150 (MQ=255) gCCGTCCAGCATTGGCAG‑CCGCTCGCGTACGGCCTGCCATTGCTGTGGCGTGATCGGGTAACGCGCCAGAGTACGCTTGCGCCGCCAGGCGCTGAATGACCACATGCCGTTCGTTCTTTACCTGTTCAGTGAGCCTTGGCCGTACGGccc > 2:1140584/1‑150 (MQ=255) ccGTCCAGCATTGGCAG‑CCGCTCGCGTACGGCCTGCCATTGCTGTGGCGTGATCGGGTAACGCGCCAGAGTACGCTTGCGCCGCCAGGCGCTGAATGACCACATGCCGTTCGTTCTTTACCTGTTCAGTGAGCCTTGGCCGTACGGCCCa < 1:822428/150‑1 (MQ=255) cGTCCAGCATTGGCAG‑CCGCTCGCGTACGGCCTGCCATTGCTGTGGCGTGATCGGGTAACGCGCCAGAGTACGCTTGCGCCGCCAGGCGCTGAATGACCACATGCCGTTCGTTCTTTACCTGTTCAGTGAGCCTTGGCCGTACGGCCCAg < 1:1140584/150‑1 (MQ=255) gTCCAGCATTGGCAG‑CCGCTCGCGTACGGCCTGCCATTGCTGTGGCGTGATCGGGTAACGCGCCAGAGTACGCTTGCGCCGCCAGGCGCTGAATGACCACATGCCGTTCGTTCTTTACCTGTTCAGTGAGCCTTGGCCGTACGGCCCAgg > 2:2337084/1‑150 (MQ=255) gTCCAGCATTGGCAG‑CCGCTCGCGTACGGCCTGCCATTGCTGTGGCGTGATCGGGTAACGCGCCAGAGTACGCTTGCGCCGCCAGGCGCTGAATGACCACATGCCGTTCGTTCTTTACCTGTTCAGTGAGCCTTGGCCGTACGGCCAAgg < 1:458775/150‑1 (MQ=255) gTCCAGCATTGGCAG‑CCGCTCGCGTACGGCCTGCCATTGCTGTGGCGTGATCGGGTAACGCGCCAGAGTACGCTTGCGCCGCCAGGCGCTGAATGACCACATGCCGTTCGTTCTTTACCTGTTCAGTGAGCCTGGGCCGTACGGCCAAgg < 1:1596867/150‑1 (MQ=255) tCCAGCATTGGCAG‑CCGCTCGCGTACGGCCTGCCACTGCTGTGGCGTGATCGGGTAACGCGCCAGAGTACGCTTGCGCCGCCAGGCGCTGAATGACCACATGCCGTTCGTGGTTGACCTGTTCAGTGAGCCTTGGCCGTACGGCCCAGgc > 1:739211/1‑150 (MQ=255) cacagcaatggcaggccgtacgcgagcggctgccaatgctgTGGCGTGATCGGGTAACGCGCCAGAGTACGCTTGCGCCGCCAGGCGCTGAATGACCACATGCCGTTCGTTCTTTACCTGTTCAGTGAGCCTTGGCCGTACGGCCCAGgc > 1:2371468‑M2/42‑150 (MQ=255) GCATTGGCAG‑CCGCTCGCGTACGGCCTGCCATTGCTGTGGCGTGATCGGGTAACGCGCCAGAGTACGCTTGCGCCGCCAGGCGCTGAATGACCACATGCCGTTCGTTCTTTACCTGTTCAGTGAGCCTGGGCCGTACGGCcaaggctcac > 2:400390‑M1/1‑146 (MQ=255) CATTGGCAG‑CCGCTCGCGTACGGCCTGCCATTGCTGTGGCGTGATCGGGTAACGCGCCAGAGTACGCTTGCGCCGCCAGGCGCTGAATGACCACATGCCGTTCGTTCTTTACCTGTTCAGTGAGCCTTGGcc > 2:2084703‑M1/1‑132 (MQ=255) CATTGGCAG‑CCGCTCGCGTACGGCCTGCCATTGCTGTGGCGTGATCGGGTAACGCGCCAGAGTACGCTTGCGCCGCCAGGCGCTGAATGACCACATGCCGTTCGTTCTTTACCTGTTCAGTGAGCCTTGGcc < 1:2084703‑M1/132‑1 (MQ=255) g‑CCGCTCGCGTACGGCCTGCCATTGCTGTGGCGTGATCGGGTAACGCGCCAGAGTACGCTTGCGCCGCCAGGCGCTGAATGACCACATGCCGTTCGTTCTTTACCTGTTCCGTGAGCCTTGGCCGTACGGCCCAGGCGCCCACGCAGCaa > 1:1231428/1‑150 (MQ=255) g‑CCGCTCGCGTACGGCCTGCCATTGCTGTGGCGTGATCGGGTAACGCGCCAGAGTACGCTTGCGCCGCCAGGCGCTGAATGACCACATGCCGTTCGTTCTTTACCTGTTCAGTGAGCCTTGGCCGTACGGCCCAGGCGCCCACGCAGCaa < 2:1151292/150‑1 (MQ=255) ccGCTCGCGTACGGCCTGCCATTGCTGTGGCGTGATCGGGTAACGCGCCAGAGTACGCTTGCGCCGCCAGGCGCTGAATGACCACATGCCGTTCGTTCTTTACCTGTTCAGTGAGCCTTGGCCGTACGGCCCAGGCGCCCACGCAGCAAg < 1:2198611/150‑1 (MQ=255) gCTCGCGTACGGCCTGCCATTGCTGTGGCGTGATCGGGTAACGCGCCAGAGTACGCTTGCGCCGCCAGGCGCTGAATGACCACATGCCGTTCGTTCTTTACCTGTTCAGTGAGCCTTGGCCGTACGGCCCAGGCGCCCACGCAGCAAGcc < 2:1790007/150‑1 (MQ=255) gCTCGCGTACGGCCTGCCATTGCTGTGGCGTGATCGGGTAACGCGCCAGAGTACGCTTGCGCCGCCAGGCGCTGAATGACCACATGCCGTTCGTTCTTTACCTGTTCAGTGAGCCTTGGCCGTACGGCCCAGGCGCCCACGCAGCAAGcc < 1:617628/150‑1 (MQ=255) ggCCTGCCATTGCTGTGGCGTGCTAGGGTGCCCAGGCAGATGACTCTTGCGCCGCCATTCGCTGAATGACCACATGCCGTTCGTTCTTTACCTGTTCAGTGAGCCTTGGCCGTACGGCCCAGGCGCCCACGCCGCAAGCCGAGAatcatc < 2:1231428/150‑1 (MQ=255) ggCCTGCCATTGCTGTGGCGTGATCGGGTAACGCGCCAGAGTACGCTTGCGCCGCCAGGCGCTGAATGACCACATGCCGTTCGTTCTTTACCTGTTCAGTGAGCCTTGGCCGTACGGCCCAGGCGCCCACGCAGCAAGCCGAGAatcatc > 1:2197910/1‑150 (MQ=255) cTGCCATTGCTGTGGCGTGATCGGGTAACGCGCCAGAGTACGCTTGCGCCGCCAGGCGCTGAATGACCACATGCCGTTCGTTCTTTACCTGTTCAGTGAGCCTTGGCCGTACGGCCCAGGCGCCCACGCAGCAAGCCGAGAATCATCGGc > 2:2049025/1‑150 (MQ=255) gCCATTGCTGTGGCGTGATCGGGTAACGCGCCAGAGTACGCTTGCGCCGCCAGGCGCTGAATGACCACATGCCGTTCGTTCTTTACCTGTTCAGTGAGCCTTGGCCGTAc < 2:732017/110‑1 (MQ=255) gCCATTGCTGTGGCGTGATCGGGTAACGCGCCAGAGTACGCTTGCGCCGCCAGGCGCTGAATGACCACATGCCGTTCGTTCTTTACCTGTTCAGTGAGCCTTGGCCGTAc > 1:732017/1‑110 (MQ=255) gCCATTGCTGTGGCGTGATCGGGTAACGCGCCAGAGTACGCTTGCGCCGCCAGGCGCTGAATGACCACATGCCGTTCGTTCTTTACCTGTTCAGTGAGCCTTGGCCGTACGGCCCAGGCGCCCACGCAGCAAGCCGAGAATCATCGGCAc > 2:2222912/1‑150 (MQ=255) ttGCTGTGGCGTGATCGGGTAACGCGCCAGAGTACGCTTGCGCCGCCAGGCGCTGAATGACCACATGCCTTTCGTTCTTTACCTGTTCGGTGAGCCTTGGCCGTACGGCCCAGGCGCCCACGCAGCAAGCCGAGAATCATCGGCACCAGc > 1:816159/1‑150 (MQ=255) gctgTGGCGTGATCGGGTAACGCGCCAGAGTACGCTTGCGCCGCCAGGCGCTGAATGACCACATGCCGTTCGTTCTTTACCTGTTCAGTGAGCCTTGGCCGTACGGCCCAGGCGCCCACGCAGCAAGCCGAGAATCATCGGCACCAGCGa < 1:1055312‑M2/146‑1 (MQ=255) ctgTGGCGTGATCGGGTAACGCGCCAGAGTACGCTTGCGCCGCCAGGCGCTGAATGACCACATGCCGTTCGTTCTTTACCTGTTCAGTGAGCCTTGGCCGTACGGCCCAGGCGCCCACgca > 2:2399358‑M2/4‑121 (MQ=255) ctgTGGCGTGATCGGGTAACGCGCCAGAGTACGCTTGCGCCGCCAGGCGCTGAATGACCACATGCCGTTCGTTCTTTACCTGTTCAGTGAGCCTTGGCCGTACGGCCCAGGCGCCCACgca < 1:2399358‑M2/118‑1 (MQ=255) tgTGGCGTGATCGGGTAACGCGCCTGAGTACGCTTGCGCCGCCAGGCGCTGAATGACCACATGCCGTTCGTTCTTTACCTGTTCAGTGAGCCTTGGCGGTACGGCCCAGGCGCCCACGCAGCAAGCCGAGAATCATCGGCACCAGCGACa > 1:1055114‑M2/3‑150 (MQ=255) tgTGGCGTGATCGGGTAACGCGCCAGAGTACGCTTGCGCCGCCAGGCGCTGAATGACCACATGCCGTTCGTTCTTTACCTGTTCAGTGAGCCTTGGCCGTACGGCCCAGGCGCCCACGCAGCAAGCCGAGAATCATCGGCACCAGCGACa < 2:2051002‑M2/148‑1 (MQ=255) gTGGCGTGATCGGGTAACGCGCCAGAGTACGCTTGCGCCGCCAGGCGCTGAATGACCACATGCCGTTCGTTCTTTACCTGTTCAGTGAGCCTTGGCCGTACGGCCCAGGCGCCCACGCAGCAAGCCGAGAATCATCGGCACCAGCGACAg < 1:692635‑M2/149‑1 (MQ=255) gTGATCGGGTAACGCGCCAGAGTACGCTTGCGCCGCCAGGCGCTGAATGACCACATGCCGTTCGTTCTTTACCTGTTCAGTGAGCCTTGGCCGTACGGCCCAGGCGCCCACGCAGCAAGCCGAGAATCATCGGCACCAGCGACAGgatg > 1:812235/1‑149 (MQ=255) gTGATCGGGTAACGCGCCAGAGTACGCTTGCGCCGCCAGGCGCTGAATGACCACATGCCGTTCGTTCTTTACCTGTTCAGTGAGCCTTGGCCGTACGGCCCAGGCGCCCACGCAGCAAGCCGAGAATCATCGGCACCAGCGACAGgatg < 2:812235/149‑1 (MQ=255) aTCGGGTAACGCGCCAGAGTACGCTTGCGCCGCCAGGCGCTGAATGACCACATGCCTTTCGTTCTTTACCTGTTCGGTGAGCCTTGGCCGTACGGCCCAGGCGCCCACGCAGCAAGCCGAGAATCATCGGCACCAGCGACAGgatgatga < 2:816159/150‑1 (MQ=255) tCGGGTAACGCGCCAGAGTACGCTTGCGCCGCCAGGCGCTGAATGACCACATGCCGTTCGTTCTTTACCTGTTCAGTGAGCCTTGGCCGTACGGCCCAGGCGCCCACGCAGCAAGCCGAGAATCATCGGCACCAGCGACAGgatgatgat < 1:1332893/150‑1 (MQ=255) gggTAACGCGCCAGAGTACGCTTGCGCCGCCAGGCGCTGAATGACCACATGCCGTTCGTTCTTTACCTGTTCAGTGAGCCTTGGCCGTACGGCCCAGGCGCCCACGCAGCAAGCCGAGAATCATCGGCACCAGCGACAGGATGATGATGc > 1:875774/1‑150 (MQ=255) aaCGCGCCAGAGTACGCTTGCGCCGCCAGGCGCTGAATGACCACATGCCGTTCGTTCTTTACCTGTTCAGTGAGCCTTGGCCGTACGGCCCAGGCGCCCACGCAGCAAGCCGAGAATCATCGGCACCAGCGACAGGATGATGATGCccac > 1:1672169/1‑150 (MQ=255) cgcCAGAGTACGCTTGCGCCGCCAGGCGCTGAATGACCACATGCCGTTCGTTCTTTACCTGTTCAGTGAGCCTTGGCCGTACGGCCCAGGCGCCCACGCAGCAAGCCGAGAATCATCGGCACCAGCGACAGGATGATGATGCccaccacc < 2:2197910/150‑1 (MQ=255) gcCAGAGTACGCTTGCGCCGCCAGGCGCTGAATGACCACATGCCGTTCGTTCTTTACCTGTTCAGTGAGCCTTGGCCGTACGGCCCAGGCGCCCACGCAGCAAGCCGAGAATCATCGGCACCAGCGACAGGATGATGATGCccaccacca > 2:515279/1‑150 (MQ=255) gcCAGAGTACGCTTGCGCCGCCAGGCGCTGAATGACCACATGCCGTTCGTTCTTTACCTGTTCAGTGAGCCTGGGCCGTACGGCCAAgg > 1:30825/1‑89 (MQ=255) gcCAGAGTACGCTTGCGCCGCCAGGCGCTGAATGACCACATGCCGTTCGTTCTTTACCTGTTCAGTGAGCCTGGGCCGTACGGCCAAgg < 2:30825/89‑1 (MQ=255) gcgTACGCTTGCGCCGCCAGGCGCTGACTCAACACTCGTAGGTTGTTCTTTACCCGTTCCGTGAGCCTTGGCCGTCCGGCGCAGGCGCCCACGCAGCAAGCCGAGAATCATCGGCACCAGCGACAGGATGATGATGCCCACCACCATCAg < 2:803811/148‑1 (MQ=255) ttGCGCCGCCAGGCGCTGAATGACCACATGCCGTTCGTTCTTTACCTGTTCAGTGAGCCTTGGCCGTACGGCCCAGGCGCCCACGCAGCAAGCCGAGAATCATCGGCACCAGCGACAGGATGATGATGCCCACCACCATCAGCGACAGGt > 1:515965/1‑150 (MQ=255) ttGCGCCGCCAGGCGCTGAATGACCACATGCCGTTCGTTCTTTACCTGTTCAGTGAGCCTTGGCCGTACGGCCCAGGCGCCCACGCAGCAAGCCGAGAATCATCGGCACCAGCGACAGGATGATGATGCCCACCACCATCAGCGACAGGt > 1:1301904/1‑150 (MQ=255) ttGCGCCGCCAGGCGCTGAATGACCACATGCCGTTCGTTCTTTACCTGTTCAGTGAGCCTTGGCCGTACGGCCCAGGCGCCCACGCAGCAAGCCGAGAATCATCGGCACCAGCGACAGGATGATGATGCCCACCACCATCAGCGACAGGt > 1:1491404/1‑150 (MQ=255) gcgcCGCCAGGCGCTGAATGACCCCATGCCGTTCGTTCTTTACCTGTTCAGTGAGCCTTGGCCGTACGGCCCAGGCGCCCACGCAGCAAGCCGAGAATCATCGGCACCAGCGACAGGATGATGATGCCCACCACCATCAGCGACAGGtgc < 2:739211/150‑1 (MQ=255) aGGCGCTGAATGACCACATGCCGTTCGTTCTTTACCTGTTCAGTGAGCCTTGGCCGTACGGCCCAGGCGCCCACGCAGCAAGCCGAGAATCATCg < 2:849078/95‑1 (MQ=255) aGGCGCTGAATGACCACATGCCGTTCGTTCTTTACCTGTTCAGTGAGCCTTGGCCGTACGGCCCAGGCGCCCACGCAGCAAGCCGAGAATCATCg > 1:849078/1‑95 (MQ=255) aGGCGCTGAATGACCACATGCCGTTCGTTCTTTACCTGTTCAGTGAGCCTTGGCCGTACGGCCCAGGCGCCCACGCAGCAAGCCGAGAATCATCGGCACCAGCGACAGGATGATGATGCCCACCACCATCAGCGACAGGTGCTGCTtgat < 2:1301904/150‑1 (MQ=255) cgcTGAATGACCACATGCCGTTCGTTCTTTACCTGTTCAGTGAGCCTTGGCCGTACGGCCCAGGCGCCCACGCAGCAAGCCGAGAATCATCGGCACCAGCGACAGGATGATGATGCCCACCACCATCAGCGACAGGTGCTGCTTGATGaa > 2:938827/1‑150 (MQ=255) gcTGAATGACCACATGCCGTTCGTTCTTTACCTGTTCAGTGAGCCTTGGCCGTACGGCCCAGGCGCCCACGCAGCAAGCCGAGAATCATCGGCACCAGCGACAGGATGATGATGCCCACCACCATCAGCGACAGGTGCTGCTTGATGAAt < 1:2337084/150‑1 (MQ=255) gcTGAATGACCACATGCCGTTCGTTCTTTACCTGTTCAGTGAGCCTTGGCCGTACGGCCCAGGCGCCCACGCAGCAAGCCGAGAATCATCGGCACCAGCGACAGGATGATGATGCCCACCACCATCAGCGACAGGTGCTGCTTGATGAAt < 1:515279/150‑1 (MQ=255) gcTGAATGACCACATGCCGTTCGTTCTTTACCTGTTCAGTGAGCCTTGGCCGTACGGCCCAGGCGCCCACGCAGCAAGCCGAGAATCATCGGCACCAGCGACAGGATGATGATGCCCACCACCATCAGCGACAGGTGCTGCTTGATGAAt < 2:1617875/150‑1 (MQ=255) gcTGAATGACCACATGCCGTTCGTTCTTTACCTGTTCAGTGAGCCTGGGCCGTACGGCCCAGGCGCCCACGCAGCAAGCCGAGAATCATCGGCACCAGCGACAGGATGATGATGCCCACCACCATCAGCGACAGGTGCTGCTTGATGAAt < 1:1479112/150‑1 (MQ=255) tGAATGACCACATGCCGTTCGTTCTTTACCTGTTCAGTGAGCCTTGGCCGTACGGCCCAGGCGCCCACGCAGCAAGCCGAGAATCATCGGCACCAGCGACAGGATGATGATGCCCACCACCATCAGCGACAGGTGCTGCTTGATGAATgg > 2:718509/1‑150 (MQ=255) ccACATGCCGTTCGTTCTTTACCTGTTCAGTGAGCCTTGGCCGTACGGCCCAGGCGCCCACGCAGCAAGCCGAGAATCATCGGCa < 1:1779204/85‑1 (MQ=255) ccACATGCCGTTCGTTCTTTACCTGTTCAGTGAGCCTTGGCCGTACGGCCCAGGCGCCCACGCAGCAAGCCGAGAATCATCGGCa > 2:1779204/1‑85 (MQ=255) ccACATGCCGTTCGTTCTTTACCTGTTCAGTGAGCCTTGGCCGTACGGCCCAGGCGCCCACGCAGCAAGCCGAGAAGCTTCGGCACCAGCGAAAGGTTGCTCATGCCATGGGCCAGCGGTTACAGGTGCTGCTTGATGAATGGCACGTTg > 1:2341037/1‑150 (MQ=255) cacaTGCCGTTCGTTCTTTACCTGTTCAGTGAGCCTTGGCCGTACGGCCCAGGCGCCCACGCAGCAAGCCGAGAATCATCGGCACCAGCGACAGGATGATGATGCCCACCACCATCAGCGACAGGTGCTGCTTGATGAATGGCACGTTGc < 1:718509/150‑1 (MQ=255) caTGCCGTTCGTTCTTTACCTGTTCAGTGAGCCTTGGCCGTACGGCCCAGGCGCCCACGCAGCAAGCCGAGAATCATCGGCACCAGCGACAGGATGATGATGCCCACCACCATCAGCGACAGGTGCTGCTTGATGAATGGCACGTTGCCg > 1:581288/1‑150 (MQ=255) aTGCCGTTCGTTCTTTACCTGTTCAGTGAGCCTTGGCCGTACGGCCCAGGCGCCACCAGCGCAAGCCGAGAAGCAGCTGCACCAGCGACAGGATGATGATGCCCACCACCATCAGCGACAGGTGCTGCTTGATGAATGGCACGTTGCCga > 1:2100527/1‑150 (MQ=255) ccGTTCGTTCTTTACCTGTTCAGTGAGCCTTGGCCGTACGGTCCAGGCGCCCACGCAGCAAGCCGAGAATCATCGGCACCAGCGACAGGATGATGATGCCCACCACCATCAGCGACAg > 2:250180/1‑118 (MQ=255) ccGTTCGTTCTTTACCTGTTCAGTGAGCCTTGGCCGTACGGTCCAGGCGCCCACGCAGCAAGCCGAGAATCATCGGCACCAGCGACAGGATGATGATGCCCACCACCATCAGCGACAg < 1:250180/118‑1 (MQ=255) cgttcgttCTTTACCTGTTCAGTGAGCCTTGGCCGTACGGCCCAGGCGCCCACGCAGCAAGCCGAGAATCATCGGCACCAGCGACAGGATGATGATGCCCACCACCATCAGCGACAGGTGCTGCTTGATGAATGGCACGTTGCCgaagaa < 2:1002370/150‑1 (MQ=255) gttcgttcTTTACCTGTTCAGTGAGCCTTGGCCGTACGGCCCAGGCGCCCACGCAGCAAGCCGAGAATCATCg > 2:73729/1‑73 (MQ=255) gttcgttcTTTACCTGTTCAGTGAGCCTTGGCCGTACGGCCCAGGCGCCCACGCAGCAAGCCGAGAATCATCg < 1:73729/73‑1 (MQ=255) ttcgttcTTTACCTGTTCAGTGAGCCTTGGCCGTACGGCCCAGGCGCCCACGCAGCAAGCCGAGAATCATCGGCACCAGCGACAGGATGATGATGCCCACCACCATCAGCGACAg < 1:2246058/115‑1 (MQ=255) ttcgttcTTTACCTGTTCAGTGAGCCTTGGCCGTACGGCCCAGGCGCCCACGCAGCAAGCCGAGAATCATCGGCACCAGCGACAGGATGATGATGCCCACCACCATCAGCGACAg > 2:2246058/1‑115 (MQ=255) gttcTTTACCTGTTCAGTGAGCCTTGGCCGTACGGCCCAGGCGCCCACGCAGCAAGCCGAGAATCTTTGGCCTCGGCGACAGGATGATGATGCCCACCACCATCAGCGACAGGTGCTGCTTGATGAATGGCACGTTGCCGAAGAAGTAGc < 1:2222912/150‑1 (MQ=255) gttcTTTACCTGTTCAGTGAGCCTTGGCCGTACGGCCCAGGCGCCCACGCAGCAAGCCGAGAATCATCGGCACCAGCGACAGGATGATGATGGCGACTACCATCAGCGACAGGTGCTGCTTGATGAATGGCACGTTGCCGAAGAAGTAGc > 1:24448/1‑150 (MQ=255) tcTTTACCTGTTCAGTGAGCCTTGGCCGTACGGCCCAGGCGCCCACGCAGCAAGCCGAGAATCATCGGCACCAGCGACAGGATGATGATGCCCACCACCATCAGCGACAGGTGCTGCTTGATGAATGGCACGTTGCCgaa < 1:2231951/140‑1 (MQ=255) tcTTTACCTGTTCAGTGAGCCTTGGCCGTACGGCCCAGGCGCCCACGCAGCAAGCCGAGAATCATCGGCACCAGCGACAGGATGATGATGCCCACCACCATCAGCGACAGGTGCTGCTTGATGAATGGCACGTTGCCgaa > 2:2231951/1‑140 (MQ=255) tttACCTGTTCAGTGAGCCTTGGCCGTACGGCCCAGGCGCCCACGCAGCAAGCCGAGAATCATCGGCACCAGCGACAGGATGATGATGc < 2:1650243/89‑1 (MQ=255) tttACCTGTTCAGTGAGCCTTGGCCGTACGGCCCAGGCGCCCACGCAGCAAGCCGAGAATCATCGGCACCAGCGACAGGATGATGATGc > 1:1650243/1‑89 (MQ=255) tttACCTGTTCAGTGAGCCTTGGCCGTACGGCCCAGGCGCCCACGCAGCAAGCCGAGAATCATCGGCACCAGCGACAGGATGATGATGCCCACCACCATCAGCGACAGGTGCTGCTTGATGaa > 2:2235079/1‑123 (MQ=255) tttACCTGTTCAGTGAGCCTTGGCCGTACGGCCCAGGCGCCCACGCAGCAAGCCGAGAATCATCGGCACCAGCGACAGGATGATGATGCCCACCACCATCAGCGACAGGTGCTGCTTGATGaa < 1:2235079/123‑1 (MQ=255) aCCTGTTCAGTGAGCCTTGGCCGTACGGCCCAGGCGCCCACGCAGCAAGCCGAGAATCATCGGCAACAGCGACAGGATGATGCTGCCCACCACCATCAGCGACAGGTGCTGCTTGATGAATGGCACGTTGCCGAAGAAGTAGCCCAAGGt > 2:1279224/1‑150 (MQ=255) ccTGTTCAGTGAGCCTTGGCCGTACGGCCCAAGAGCCCACGCAGCAAGCCGAGAATCATCGGCACCAGCGACAGGATGATGATGCCCACCACCATCAGCGACAGGTGCTGCTTGATGAATGGCACGTTGCCGAAGAAGTAGCCCAAGGTg > 1:315890/1‑150 (MQ=255) cTGTTCAGTGAGCCTTGGCCGTACGGCCCAGGCGCCCACGCAGCAAGCCGAGAATCATCGGCACCAGCGACAGGATGATGATGCCCACCACCATCAGCGACAGGTGCTGCTTGATGAATGGCACGTTGCCGAAGAAGTAGCCCAAGGTGa > 1:1050747/1‑150 (MQ=255) cTGTTCAGTGAGCCTTGGCCGTACGGCCCAGGCGCCCACGCAGCAAGCCGAGAATCATCGGCACCAGCGACAGGATGATGATGCCCACCACCATCAGCGACAGGTGCTGCTTGATGAATGGCACGTTGCCGAAGAAGTAGCCCAAGGTGa > 1:1095200/1‑150 (MQ=255) tGTTCAGTGAGCCTTGGCCGTACGGCCCAGGCGCCCACGCAGCAAGCCGAGAATCATCGGCACCAGCGACAGGATGATGATGCCCACCACCATCAGCGACAGGTGCTGCTTGATGAATGGCACGTTGCCGAAGAAGTAGCCCAAGGTGAc > 2:700146/1‑150 (MQ=255) ttCAGTGAGCCTTGGCCGTACGGCCCAGGCGCCCACGCAGCAAGCCGAGAATCATCGGCACCAGCGACAGGATGATGATGCCCACCACCATCAGCGACAGGTGCTGCTTGATGAATGGCACGTTGCCGAAGAAGTAGCCCAAGGTGACCa < 1:938827/150‑1 (MQ=255) aGTGAGCCTTGGCCGTACGGCCCAGGCGCCCACGCAGCAAGCCGAGAATCATCGGCACCAGCGACAGGATGATGATGCCCACCACCATCAGCGACAGGTGCTGCTTGATGAAt > 2:1350508/1‑113 (MQ=255) aGTGAGCCTTGGCCGTACGGCCCAGGCGCCCACGCAGCAAGCCGAGAATCATCGGCACCAGCGACAGGATGATGATGCCCACCACCATCAGCGACAGGTGCTGCTTGATGAAt < 1:1350508/113‑1 (MQ=255) aGTGAGCCTTGGCCGTACGGCCCAGGCGCCCACGCAGCAAGCCGAGAATCATCGGCACCAGCGACAGGATGATGATGCCCACCACCATCAGCGACAGGTGCTGCTTGATGAATGGCACGTTGCCGAAGAAGTAGCCCAAGGAGACCAGgc > 1:576231/1‑150 (MQ=255) tGAGCCTTGGCCGTACGGCCCAGGCGCCCACGCAGCAAGCCGAGAATCATCGGCACCAGCGACAGTATGATGATGCCCACCACCATCAGCGACAGGTGCTGCTTGATGAATGGCACGTTGCCGAAGAAGAAGCCCAAGGTGACCAAgccg > 2:250674/1‑150 (MQ=255) tGAGCCTTGGCCGTACGGCCCAGGCGCCCACGCAGCAAGCCGAGAATCATCGGCACCAGCGACAGGATGATGATGCCCACCACCATCAGCGACAGGTGCTGCTTGATGAATGGCACGTTGCCGAAGAAGTAGCCCAAGGTGACCAGgccg > 1:1419255/1‑150 (MQ=255) gAGCCTTGGCCGTACGGCCCAGGCGCCCACGCAGCAAGCCGAGAATCATCGGCACCAGCGACAGGATGATGATGCCCACCACCATCAGCGACAGGTGCTGCTTGATGAATGGCACGTTGCCGAAGAAGTAGCCCAAGGTGACCAGgccgc < 2:581288/150‑1 (MQ=255) aGCCTTGGCCGTACGGCCCAGGCGCCCACGCAGCAAGCCGAGAATCATCGGCACCAGCGACAGGATGATGATGCCCACCACCATCAGc > 2:1810861/1‑88 (MQ=255) aGCCTTGGCCGTACGGCCCAGGCGCCCACGCAGCAAGCCGAGAATCATCGGCACCAGCGACAGGATGATGATGCCCACCACCATCAGc < 1:1810861/88‑1 (MQ=255) ccTTGGCCGTACGGCCCAGGCGCCCACGCAGCAAGCCGAGAATCATCGGCACCAGCGACAGGATGATGATGCCCACCACCATCAGCGACAGGTGCTGCTTGATGAATGGCACGTTGCCGAAGAAGTAGCCCAAGGTGACCAGGCCGCCGa < 2:1483171/150‑1 (MQ=255) ttGGCCGTACGGCCCAGGCGCCCACGCAGCAAGCCGAGAATCATCGGCACCAGCGACAGGATGATGATGCCCACCATCATCAGCGACAGGTGCTCCTCGGCGACTGTCACGTGGCCTAAGAAGTAGCCCAAGGTGACCAGGCCGCCGAcc > 1:1740753/1‑150 (MQ=255) ttGGCCGTACGGCCCAGGCGCCCACGCAGCAAGCCGAGAATCATCGGCACCAGCGACAGGATGATGATGCCCACCACCATCAGCGACAGGTGCTGCTTGATGAATGGCACGTTGCCGAAGAAGTAGCCCAAGGTGACCAGGCCGCCGAcc > 1:1974954/1‑150 (MQ=255) | AGCGTCGCTGATGCCGTCCAGCATTGGCAG‑CCGCTCGCGTACGGCCTGCCATTGCTGTGGCGTGATCGGGTAACGCGCCAGAGTACGCTTGCGCCGCCAGGCGCTGAATGACCACATGCCGTTCGTTCTTTACCTGTTCAGTGAGCCTTGGCCGTACGGCCCAGGCGCCCACGCAGCAAGCCGAGAATCATCGGCACCAGCGACAGGATGATGATGCCCACCACCATCAGCGACAGGTGCTGCTTGATGAATGGCACGTTGCCGAAGAAGTAGCCCAAGGTGACCAGGCCGCCGACC > NC_002947/626411‑626707 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |