| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 648,292 | A→T | 11.8% | intergenic (+58/+33) | acoR → / ← accC | acetoin catabolism regulatory protein/acetyl‑CoA carboxylase biotin carboxylase subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 648,292 | 0 | A | T | 11.8% | 326.9 / 27.8 | 112 | intergenic (+58/+33) | acoR/accC | acetoin catabolism regulatory protein/acetyl‑CoA carboxylase biotin carboxylase subunit |
| Reads supporting (aligned to +/- strand): ref base A (45/53); new base T (8/5); total (53/59) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.79e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.79e-01 | |||||||||||
Only 100 of 116 total aligned reads displayed.
CTGATGCGGCACGGGCTTTGGGCATTTCGCGGGCGACGCTTTATCGGCGAGTGCATGAGCACCGCATCGACATGCCGCGGATGAAGGGGTAGAGCCCTGGGGCCGCGACGCGGCCCCAGATTCTGGCAGGCAATAAAAAACCCCGGCACAGGGCCGGGGTTCTGGTACATCACACTACACGATCACTCCTGGTTGGCCAGTTTGTGCTCGAGGTAG‑TGAA‑TGTTGAC‑GCCGCCTTTGCAGAAGCCTTCATCACGCACCAGGTCGCGGTGCAGCGGGATGTTGGTCTTGATGCCGTCGA > NC_002947/648143‑648440 | ctgctgCGGCACGGGCTTTGGGCATTTCGCGTGCGACGCTTTATCGGCGAGTGCATGAGCACCGCATCGACATGCCGCGGATGAAGGGGTAGAGCCCTGGGGCCGCGACGCGGCCCCAGCTTCTGGCAGGCAATAAAAAACCACGGcaca < 1:1109451/150‑1 (MQ=255) tGATGCGGCCCGGGCTTTGGGCATTTCGCGGGCGACGCTTTATCGGCGAGTGCATGAGCACCGCATCGACATGCCGCGGATGAAGGGGTAGAGCCCTGGGGCCGCGACGCGGCCCCAGATTCTGGCAGGCAATAAAAAACCCCGGCACAg < 2:1425280/150‑1 (MQ=255) gCACGGGCTTTGGGCATTTCGCGGGCGACGCTTTATCGGCGAGTGCATGAGCACCGCATCGACATGCCGCGGATGAAGGGGTAGAGCCCTGGGGCCGGGACGCGGCCCCAGATTCTGGCAGGCAATAAAAAACCCCGGCACAGGGCCggg > 2:2131073/1‑150 (MQ=255) gCACGGGCTTTGGGCATTTCGCGGGCGACGCTTTATCGGCGAGTGCATGAGCACCGCATCGACATGCCGCGGATGAAGGGGTAGAGCCCTGGGGCCGCGACGCGGCCCCAGATTCTGGCAGGCAATAAAAAACCCCGGCACAGGGCCggg < 2:1749577/150‑1 (MQ=255) gCACGGGCTTTGGGCATTTCGCGGGCGACGCTTTATCGGCGAGTGCATGAGCACCGCATCGACATGCCGCGGATGAAGGGGTAGAGCCCTGGGGCCGCGACGCGGCCCCAGATTCTGGCAGGCAATAAAAAACCCCGGCACAGGGCCggg < 1:1604780/150‑1 (MQ=255) gCACGGGCTTTGGGCATTTCGCGGGCGACGCTTTATAGGAGAGTGCATGAGCACCGCATCGACATGCCGCGGATGAAGGGGTAGAGCCCTGGGGCCGCGACGCGGCCCCAGATTCTGGCAGGCAATAAAAAACCCCGGCACAGGGCCggg < 1:1935003/150‑1 (MQ=255) ggCTTTGGGCATTTCGCGGGCGACGCTTTATCGGCGAGTGCATGAGCACCGCATCGACATGCCGCGGATGAAGGGGTAGAGCCCTGGGGCCGCGACGCGGCCCCAGATTCTGGCAGGCAATAAAAAACCCCGGCACAGGGCCGGGGTTCt < 1:104437/150‑1 (MQ=255) ggCTTTGGGCATTTCGCGGGCGACGCTTTATCGGCGAGTGCATGAGCACCGAATCGACATGCCGCGGATGAAGGGGTAGAGTCCTAGGGCCGCGACGCGGCCCCAGATTCAAAAAAAAAAAAAAAAACCCCGGCACAGGGCCGGGGTTCt < 2:712037/150‑1 (MQ=255) gCTTTGGGCATTTCGCGGGCGACGCTTTATCGGCGAGTGCATGAGCACCGCATCGACATGCCGCGGATGAAGGGGTAGAGCCCTGGGGCCGCGACGCGGCCCCAGATTCTGGCAGGCAATAAAAAACCCCGGCACAGGGCCGGGGTTCTg < 1:2074711/150‑1 (MQ=255) cTTTGGGCATTTCGCGGGCGACGCTTTATCGGCGAGTGCATGAGCACCGCATCGACATGCCGCGGATGAAGGGGTAGAGCCCTGGGGCCGCGACGCGGCCCCAGATTCTGGCAGGCAATAAAAAACCCCGGCACAGGGCCGGGGTTCTgg < 1:593207/150‑1 (MQ=255) tttGGGCATTTCGCGGGCGACGCTTTATCGGCGAGTGCATGAGCACCGCATCGACATGCCGCGGATGAAGGGGTAGAGCCCTGGGGCCGCGACGCGGCCCCAGATTCTGGCAGGCAATAAAAAACCCCGGCACAGGGCCGGGGTTCTGGt > 1:90466/1‑150 (MQ=255) ttGGGCATTTCGCGGGCGACGCTGTATCGGCGAGTGCATGAGCACCGCATCGACATGCCGCGGATGAAGGGGTAGAGCCCTGGGGCCGCGACGCGGCCCCAGATTCTGGCAGGCAATAAAAAACCCCGGCCCTGTGCCGGGGttttttat < 2:211386/150‑7 (MQ=255) tGGGCATTTCGCGGGCGACGCTTTAGCGGCGAGGGCATGAGCACCGCATCGACATGCCGCGGATGAAGGGGCAGACCCCTGGGGCCGCGACGCGGCCCCAGATTCTGGCAGGCAATAAAAAACCCCGGCACAGGGCCGGGGttttttatt < 2:466587/150‑8 (MQ=255) gggCATTTCGCGGGCGACGCTTTATCGGCGAGTGCATGAGCACCGCATCGACATGCCGCGGATGAAGGGGTAGAGCCCTGGGGCCGCGACGCGGCCCCAGATTCTGGCAGGCAATAAAAAACCCCGGCACAGGGCCGGGGTTCTGGTACa < 2:1043567/150‑1 (MQ=255) gCATTTCGCGGGCGACGCTTTATCGGCGAGTGCATGAGCACCGCATCGACATGCCGCGGATGAAGGGGTAGAGCCCTGGGGCCGCGACGCGGCCCCAGATTCTGGCAGGCAATAAAAAACCCCGGCACAGGGCCGGGGTTCTGGTACATc < 2:1204333/150‑1 (MQ=255) cgGGCGACGCTTTATCGGCGAGTGCATGAGCACCGCATCGACATGCCGCGGATGAAGGGGTAGAGCCCTGGGGCCGCGACGCGGCCCCAGATTCTGGCAGGCAATAAAAAACCCCGGCACAGGGCCGGGGTTCTGGTACATCACACTaca < 2:2049526/150‑1 (MQ=255) cTTTATCGGCGAGTGCATGAGCACCGCATCGACATGCCGCGGATGAAGGGGTAGAGCCCTGGGGCCGCGACGCGGCCCCAGATTCTGGCAGGCAATAAAAAACCCCGGCACAGGGCCGGGGTTCTGGTACATCACACTACACGATCACTc > 1:1294522/1‑150 (MQ=255) tttATCGGCGAGTGCATGAGCACCGCATCGACATGCCGCGGATGAAGGGGTAGAGCCCTGGGGCCGCGACGCGGCCCCAGATTCTGGCAGGCAATAAAAAACCCCGGCCCTGTGCCGGGGt < 1:1406819/121‑1 (MQ=255) tttATCGGCGAGTGCATGAGCACCGCATCGACATGCCGCGGATGAAGGGGTAGAGCCCTGGGGCCGCGACGCGGCCCCAGATTCTGGCAGGCAATAAAAAACCCCGGCCCTGTGCCGGGGt > 2:1406819/1‑121 (MQ=255) tttATCGGCGAGTGCATGAGCACCGCATCGACATGCCGCGGATGAAGGGGTAGAGCCCTGGGGCCGCGACGCGGCCCCAGATTCTGGCAGGCAATAAAAAACCCCGGCACAGGGCCGGGGTTCTGGTACATCACACTACACGATCACTcc > 1:233821/1‑150 (MQ=255) tttATCGGCGAGTGCATGAGCACCGCATCGACATGCCGCGGATGAAGGGGTAGAGCCCTGGGGCCGCGACGCGGCCCCAGATTCTGGCAGGCAATAAAAAACCCCGGCACAGGGCCGGGGTTCTGGTACATCACACTACACGATCACTcc > 1:2285127/1‑150 (MQ=255) cGGCGAGTGCATGAGCACCGCATCGACATGCCGCGGATGAAGGGGTAGAGCCCTGGGGCCGCGACGCGGCCCCAGATTCTGGCAGGCAATAAAAAACCCCGGCACAGGGCCGGGGTTCTGGTACATCACACTACACGATCACTCCTGGtt < 1:1697001/150‑1 (MQ=255) gCGAGTGCATGCGCACCGCATCGACATGCCGCGGATGAAGGGGTAGAGCCCTGGGGCCGCGACGCGGCCCCAGATTCTGGCAGGCAATAAAAAACCCCGGCACAGGGCCGTGGTTCTGGTACATCACACTACACGATCACTCCTGGTTgg < 1:2323278/150‑1 (MQ=255) cATGAGCACCGCATCGACATGCCGCGGATGAAGGGGTAGAGCCCTGGGGCCGCGACGCGGCCCCAGATTCTGGCAGGCAATAAAAAACCCCGGCACAGGGCCGGGGTTCTGGTACATCACACTACACGATCACTCCTGGTTGGCCAGttt > 2:116817/1‑150 (MQ=255) cATGAGCACCGCATCGACATGCCGCGGATGAAGGGGTAGAGCCCTGGGGCCGCGACGCGGCCCCAGACTCTGGCAGGCAATAAAAAACCCCGGCACAGGGCCGGGGTTCTGGTACATCACACTACACGATCACTCCTGGTTGGCCAGttt < 2:2241598/150‑1 (MQ=255) aTGAGCACCGCATCGACATGCCGCGGATGAAGGGGTAGAGCCCTGGGGCCGCGACGCGGCCCCAGATTCTGGCAGGCAATAAAAAACCCCGGCACAGGGCCGGGGTTCTGGTACATCACACTACACGATCACTCCTGGTTGGCCAGTTtg > 2:2153852/1‑150 (MQ=255) gcggaCCGCATCGACATGCTGCGGAGGAAGGGGTAGAGCCCTGGGGCCGCGACGCGCCCCCAGAATCTGGCAGGCAAAAAAAAACACCGGCACAGGACCTGTGGTGTGGTCCATCACGCGCCACCATCACACCTAGTTAGCGAGtgtggg > 2:2119415/5‑148 (MQ=255) aGCACCGCATCGACATGCCGCGGATGAAGGGGTAGAGCCCTGGGGCCGCGACGCGGCCCCAGATTCTGGCAGGCAATAAAAAACCCCGGCACAGGGCCGGGGTTCTGGTACATCACACTACACGATCACTCCTGGTTGGCCAGttt < 2:378682/146‑1 (MQ=255) gCACCGCATCGACATGCCGCGGATGAAGGGGTAGAGCCCTGGGGCCGCGACGCGGCCCCAGATTCTGGCAGGCAATAAAAAACCCCGGCACAGGGCCGGGGTTCTgg > 1:739032/1‑107 (MQ=255) gCACCGCATCGACATGCCGCGGATGAAGGGGTAGAGCCCTGGGGCCGCGACGCGGCCCCAGATTCTGGCAGGCAATAAAAAACCCCGGCACAGGGCCGGGGTTCTgg < 2:739032/107‑1 (MQ=255) ccGCATCGACATGCCGCGGATGAAGGGGTAGAGCCCTGGGGCCGCGACGCGGCCCCAGATTCTGGCAGGCAATAAAAAACCCCGGCACAGGGCCGGGGTTCTGGTACATCACACTACACGATCACTCCTGGTTGGCCAGTTTGTGCTCGa < 2:1829217/150‑1 (MQ=255) cGCATCGACATGCCGCGGATGAAGGGGTAGAGCCCTGGGGCCGCGACGCGGCCCCAGATTCTGGCAGGCAATAAAAAACCCCGGCACAGGGCCGGGGTTCTGGTACATCACACTACACGATCACTCCTGGTTGGCCAGTTTGTGCTCGAg < 1:651613/150‑1 (MQ=255) aCATGCCGCGGATGAAGGGGTAGAGCCCTGGGGCCGCGACGCGGCCCCAGATTCTGGCAGGCAATAAAAAACCCCGGCACAgg > 1:1942447/1‑83 (MQ=255) aCATGCCGCGGATGAAGGGGTAGAGCCCTGGGGCCGCGACGCGGCCCCAGATTCTGGCAGGCAATAAAAAACCCCGGCACAgg < 2:1942447/83‑1 (MQ=255) tGCCGCGGATGAAGGGGTAGAGCCCTGGGGCCGCGACGCGGCCCCAGATTCTGGCAGGCAATAAAAAACCCCGGCACAGGGCCGGGGTTCTGGTACATCACACTACACGATCACTCCTGGTTGGCCAGTTTGTGCTCGAGGTAG‑TGAA‑Tg < 2:822115/150‑1 (MQ=255) gCCGCGGATGAAGGGGTATAGGCCTTGGTCGGCGACGCGGCCCCAGATTCTGGCAGGCAATAAAAACACCGGGCACAGGGCCGGGGTTCTGGTACATCACACTACACGATCACTCCTGGTTGGCCAGTTTGTGCTCGAGGTAG‑TGAA‑TGt < 1:532687/150‑1 (MQ=255) cgGATGAAGGGGTAGAGCCCTGGGGCCGCGACGCGGCCCCAGATTCTGGCAGGCAATAAAAAACCCCGGCACAGGGCCGGGGTTCTGGTACATCACACTACACGATCACTCCTGGTTGGCCAGTTTGTGCTCGAGGTAG‑TGAA‑TGTTGAc < 1:116817/150‑1 (MQ=255) ggggTAGAGCCCTGGGGCCGCGACGCGGCCCCAGATTCTGGCAGGCAATAAAAAACCCCGGCACAGGGCCGGGGTTCTGGTACATcaca > 2:1028643/1‑89 (MQ=255) ggggTAGAGCCCTGGGGCCGCGACGCGGCCCCAGATTCTGGCAGGCAATAAAAAACCCCGGCACAGGGCCGGGGTTCTGGTACATcaca < 1:1028643/89‑1 (MQ=255) ggggTAGAGCCCTGGGGCCGCGACGCGGCCCCAGATTCTGGCAGGCAATAAAAAACCCCGGCACAGGGCCGGGGTTCTGGTACATCACACTACACGATCACTCCTGGTTGGCCAGTTTGTGCTCGAGGTAG‑TGAA‑TGTTGAC‑GCCGCCtt < 2:213809/150‑1 (MQ=255) ggTAGAGCCCTGGGGCCGCGACGCGGCCCCAGATTCTGGCAGGCAATAAAAAACCCCGGCACAGGGCCGGGGTTCTGGTACATCACACTACACGa < 1:1241545/95‑1 (MQ=255) tAGAGCCCTGGGGCCGCGACGCGGCCCCAGATTCTGGCAGGCAATAAAAAACCCCGGCACAGGGCCGGGGTTCTGGTACATCACACTACACGATCACTCCTGGTTGGCCAGTTTGTGCTCGAGGTAG‑TGAA‑TGTTGAC‑GCCGCCTTTGCa < 1:2131073/150‑1 (MQ=255) agCCCTGGGGCCGCGACGCGGCCCCAGATTCTGGCAGGCAATAAAAAACCCCGGCACAGGGCCGGGGTTCTGGTACATCACACTACACGATCACTCCTGGTTGGCCAGTTTGTGCTCGAGGTAG‑TGAA‑TGTTGAC‑GCCGCCTTTGCAGaa > 1:587600/1‑150 (MQ=255) ccttGGGGCCGCGACGCGGCCCCAGATTCTGGCAGGCAATAAAAAACCCCGGCACAGGGCCGGGGTTCTGGTACATCACACTACACGATCACTCCTGGTTGGCCAGTTTGTGCTCGAGGTAG‑TGAA‑TGTTGAC‑GCCGCCTTTGCAGAAGc > 2:1581038/4‑150 (MQ=255) cccTGGGGCCGCGACGCGGCCCCAGATTCTGGCAGGCAATAAAAAACCCCGGCACAGGGCCGGGGTTCTGGTACATCACACTACACGATCACTCCTGGTTGGCCAGTTTGTGCTCGAGGTAG‑TGAA‑TGTTGAC‑GCCGCCTTTGCAGAAGc < 2:2260193/150‑1 (MQ=255) cccTGGGGCCGCGACGCGGCCCCAGATTCTGGCAGGCAATAAAAAACCCCGGCACAGGGCCGGGGTTCTGGTACATCACACTACACGATCACTCCTGGTTGGCCAGTTTGTGCTCGAGGTAG‑TGAA‑TGTTGAC‑GCCGCCTTTGCAGAAGc < 1:2082674/150‑1 (MQ=255) cTGGGGCCGCGACGCGGCCCCAGATTCTGGCAGGCAATAAAAAACCCCGGCACAGGGCCGGGGTTCTGGTACATCACACTACACGATCACTCCTGGTTGGCCAGTTTGTGCTCGAGGTAG‑TGAA‑TGTTGAC‑GCCGCCTTTGCAGAAGCCt > 1:225311/1‑150 (MQ=255) tGGGGCCGCGTCGCGGCCCCAGATTCTGGCAGGCAATAAAAAACCCCGGCACAGGGCCGGGGTTCTGGTACATCACACTACACGATCACTCCTGGTTGGCCAGTTTGTGCTCGAGGTAG‑TGAA‑TGTTGAC‑GCCGCCTTTGCAGAAGCCtt > 2:2176892/1‑150 (MQ=255) tGGGGCCGCGTCGCGGCCCCAGATTCTGGCAGGCAATAAAAAACCCCGGCACAGGGCCGGGGTTCTGGTACATCACACTACACGATCACTCCTGGTTGGCCAGTTTGTGCTCGAGGTAG‑TGAA‑TGTTGAC‑GCCGCCTTTGCAGAAGCCtt > 2:2176803/1‑150 (MQ=255) tGGGGCCGCGTCGCGGCCCCAGATTCTGGCAGGCAATAAAAAACCCCGGCACAGGGCCGGGGTTCTGGTACATCACACTACACGATCACTCCTGGTTGGCCAGTTTGTGCTCGAGGTAG‑TGAA‑TGTTGAC‑GCCGCCTTGGCAGAAGCCtt > 1:534971/1‑150 (MQ=255) ggggCCGCGACGCGGCCCCAGATTCTGGCAGGCAATAAAAAACCCCGGCACAGGGCCGGGGTTCTGGTACATCACACTACACGATCACTCCTGGTTGGCCAGTTTGTGCTCGAGGTAG‑TGAA‑TGTTGAC‑GCCGCCTTTGCAGAAGCCTtc < 2:90466/150‑1 (MQ=255) gCCGCGACGCGGCCCCAGATTCTGGCAGGCAATAAAAAACCCCGGCACAGGGCCGGGGTTCTGGTACATCACACTCCACGATCACTCCTGGTTGGCCAGTTTGTGCTCGAg < 1:1170431/111‑1 (MQ=255) gCCGCGACGCGGCCCCAGATTCTGGCAGGCAATAAAAAACCCCGGCACAGGGCCGGGGTTCTGGTACATCACACTACACGATCACTCCTGGTTGGCCAGTTTGTGCTCGAg > 2:1170431/1‑111 (MQ=255) gCCGCGACGCGGCCCCAGATTCTGGCAGGCAATAAAAAACCCCGGCACAGGGCCGGGGTTCTGGTACATCACACTACACGATCACTCCTGGTTGGCCAGTTTGTGCTCGAGGTAG‑TGAA‑TGTTGAC‑GCCGCCTTTGCAGAAGCCTtcatc > 1:2014764/1‑150 (MQ=255) cgcgACGCGGCCCCAGATTCTGGCAGGCAATAAAAAACCCCGGCACAGGGCCGGGGTTCTGGTACATCACACTACACGATCACTCCTGGTTGGCCAGTTTGTGCTCGAGGTAG‑TGAA‑TGTTGAC‑GCCGCCTTTGCAGAAGCCTTCATCAc > 1:1122414/1‑150 (MQ=255) gcgACGCGGCCCCAGATTCTGGCAGGCAATAAAAAACCCCGGCACAGGGCCGGGGTTCTGGTACATCACACTACACGAt > 2:2288863/1‑79 (MQ=255) gcgACGCGGCCCCAGATTCTGGCAGGCAATAAAAAACCCCGGCACAGGGCCGGGGTTCTGGTACATCACACTACACGAt < 1:2288863/79‑1 (MQ=255) gcgACGCGGCCCCAGATTCTGGCAGGCAATAAAAAACCCCGGCACAGGGCCGGGGTTCTGGTACATCACACTACACGATCACTCCTGGTTgg < 2:2334323/92‑1 (MQ=255) gcgACGCGGCCCCAGATTCTGGCAGGCAATAAAAAACCCCGGCACAGGGCCGGGGTTCTGGTACATCACACTACACGATCACTCCTGGTTgg > 1:2334323/1‑92 (MQ=255) cgACGCGGCCCCAGATTCTGGCAGGCAATAAAAAACCCCGGCACAGGGCCGGGGTTCTGGTACATCACACTACACGATCACTCCTGGTTGGCCAGTTTGTGCTCGAGGTAG‑TGAA‑TGTTGAC‑GCCGCCTTTGCAGAAGCCTTCATCACGc > 1:1189267/1‑150 (MQ=255) aCGCGGCCCCAGATTCTGGCAGGCAATAAAAAACCCCGGCACAGGGCCGGGGTTCTGGTACATCACACTACACGATCACTCCTGGTTGGCCAGTTTGTGCTCGAGGTAG‑TGAA‑TGTTGAC‑GCCGCCTTTGCAGAAGCCTTCATCACGCAc > 2:1923876/1‑150 (MQ=255) aCGCGGCCCCAGATTCTGGCAGGCAATAAAAAACCCCGGCACAGGGCCGGGGTTCTGGTACATCACACTACACGATCACTCCTGGTTGGCCAGTTTGTGCTCGAGGTAG‑TGAA‑TGTTGAC‑GCCGCCTTTGCAGAAGCCTTCATCACGCAc < 1:1923876/150‑1 (MQ=255) cgGCCCCAGATTCTGGCAGGCAATAAAAAACCCCGGCACAGGGCCGGGGTTCTGGTACATCACACTACACGATCACTCCTGGTTGGCCAGTTTGTGCTCGAGGTAG‑TGAA‑TGTTGAC‑GCCGCCTTTGCAGAAGCCTTCATCACGCACCAg < 2:1445685/150‑1 (MQ=255) gCCCCAGATTCTGGCAGGCAATAAAAAACCCCGGCACAGGGCCGGGGTTCTGGTACATCACACTACACGATCACTCCTGGTTGGCCAGTTTGTGCTCGAGGTAG‑TGAA‑TGTTGAC‑GCCGCCTTTGCAGAAGCCTTCATCACGCACCAGGt > 2:622804/1‑150 (MQ=255) ccccAGATTCTGGCAGGCAATAAAAAACCCCGGCACAGGGCCGGGGTTCTGGTACATCACACTACACGATCACTCCTGGTTGGCCAGttt < 2:191731/90‑1 (MQ=255) ccccAGATTCTGGCAGGCAATAAAAAACCCCGGCACAGGGCCGGGGTTCTGGTACATCACACTACACGATCACTCCTGGTTGGCCAGttt > 1:191731/1‑90 (MQ=255) ccccAGATTCTGGCAGGCAATAAAAAACCCCGGCACAGGGCCGGGGTTCTGGTACATCACACTACACGATCACTCCTGGTTGGCCAGTTTGTGCTCGAGGTAG‑TGAA‑TGTTGAC‑GCCGCCTTTGCAGAAGCCTTCATCACGCACCAGGTc > 1:1768245/1‑150 (MQ=255) ccAGATTCTGGCAGGCAATAAAAAACCCCGGCACAGGGCCGGGGTTCTGGTACATCACACTACACGATCACTCCTGGTTGGc > 2:90809/1‑82 (MQ=255) ccAGATTCTGGCAGGCAATAAAAAACCCCGGCACAGGGCCGGGGTTCTGGTACATCACACTACACGATCACTCCTGGTTGGc < 1:90809/82‑1 (MQ=255) cAGATTCTGGCAGGCAATAAAAAACCCCGGCACAGGGCCGGGGTTCTGGTACATCACACTACACGATc > 2:1660232/1‑68 (MQ=255) cAGATTCTGGCAGGCAATAAAAAACCCCGGCACAGGGCCGGGGTTCTGGTACATCACACTACACGATc < 1:1660232/68‑1 (MQ=255) aTTCTGGCAGGCAATAAAAAACCCCGGCACAGGGCCGGGGTTCTGGTACATCACACTACACGATCACTCCTg > 1:1495023/1‑72 (MQ=255) tGGCAGGCAATAAAAAACCCCGGCACAGGGCCGGGGTTCTGGTACATCACACTACACGATCACTCCTGGTTGGCCAGTTTGTGCTCGAGGTAG‑TGAA‑TGTTGAC‑GCCGCCTTTGCAGAAGCCTTCATCACGCACCAGGTCGCGGTGCAGc > 1:2159753/1‑150 (MQ=255) gcaggcaATAAAAAACCCCGGCACAGGGCCGGGGTTCTGGTACATCACACTACACGATCACTCCTGGTTGGCCAGTTTGTGCTCGAGGTAG‑TGAA‑TGTTGAC‑GCCGCCTTTGCAGAAGCCTTCATCACGCACCAg > 2:1578480/1‑135 (MQ=255) gcaggcaATAAAAAACCCCGGCACAGGGCCGGGGTTCTGGTACATCACACTACACGATCACTCCTGGTTGGCCAGTTTGTGCTCGAGGTAG‑TGAA‑TGTTGAC‑GCCGCCTTTGCAGAAGCCTTCATCACGCACCAg < 1:1578480/135‑1 (MQ=255) gcaATAAAAAACCCCGGCACAGGGCCGGGGTTCTGGTACATCACACTACACGATCACTCCTGGTTGGCCAGTTTGTGCTCGAGGTAG‑TGAA‑TGTTGAC‑GCCGCCTTTGCAGAAGCCTTCATCACGCACCAGGTCGCGGTGCAGCGGGATg > 2:1645182/1‑150 (MQ=255) caATAAAAAACCCCGGCACAGGGCCGGGGTTCTGGTACATCACACTACACGATCACTCCTGGTTGGCCAGTTTGTGCTCGAGGTAG‑TGAA‑TGTTGAC‑GCCGCCTTTGCAGAAGCCTTCATCACGCACCAGGTCGCGGTGCAGCGGGATGt < 2:2159753/150‑1 (MQ=255) aTAAAAAACCCCGGCACAGGGCCGGGGTTCTGGTACATCACACTACACGATCACTCCTGGTTGGCCAGTTTGTGCTCGAGGTAG‑TGAA‑TGTTGAC‑GCCGCCTTTGCAGAAGCCTTCATCACGCACCAGGTCGCGGTGCAGCGGGATGTTg < 1:1581038/150‑1 (MQ=255) aTAAAAAACCCCGGCACAGGGCCGGGGTTCTGGTACATCACACTACACGATCACTCCTGGTTGGCCAGTTTGTGCTCGAGGTAG‑TGAA‑TGTTGAC‑GCCGCCTTTGCAGAAGCCTTCATCACGCACCAGGTCGCGGTGCAGCGGGATGTTg < 1:622804/150‑1 (MQ=255) tAAAAAACCCCGGCACAGGGCCGGGGTTCTGGTACATCACACTACACGATCACTCCTGGTTGGCCAGTTTGTGCT‑‑AGGTAGATAAATTGTTGAC‑GCCGCCTTTGCAGAAGCACTCATCCCGCTCCAGTTCGCGGTGCAGCGGGATGTTgg > 1:420240/1‑150 (MQ=255) aaaaaaCCCCGGCACAGGGCCGGGGTTCTGGTACATCACACTACACGATCACTCCTGGTTGGCCAGTTTGTGCTCGAGGTAG‑TGAA‑TGTTGACAGCCG‑CGCTGTTGAAGCCTTCATCACGCACCAGGTCGCGGTGCAGCGGGATGTTGGt > 2:1872816/1‑150 (MQ=255) aaaaaaCACCGGCACAGGGCCTTGGTTCTGGTACCTTACACGACGCGATCACGCCTGGTTGGCCAGTTTTTGCTCGGGTTAG‑TGAA‑TGTTGAC‑GCCGCCTTTGCAGAAGCCGTCATCACGCACCAGGTCGCGGTGCAGCGGGATGTTGGt < 2:233821/150‑1 (MQ=255) cagaaCCCCGGCCCTGTGCCGGGGTTTTGGTACATCACACTACACGATCACTCCTGGTTGGCCAGTTTGTGCTCGAGGTAG‑TGAA‑TGTTGAC‑GCCGCCTTTGCAGAAGCCTTCATCACGCACCAGGTcac > 1:992159/4‑128 (MQ=255) cagaaCCCCGGCCCTGTGCCGGGGTTCTGGTACATCACACTACACGATCACTCCTGGTTGGCCAGTTTGTGCTCGAGGTAG‑TGAA‑TGTTGAC‑GCCGCCTTTGCAGAAGCCTTCATCACGCACCAGGTCGCGGTGCAGCGGGATGTTGGTc > 2:1134784/4‑150 (MQ=255) aaaaCCCCGGCACAGGGCCGGGGTTCTGGTACATCACACTACACGATCACTCCTGGTTGGCCAGTTTGTGCTCGAGGTAG‑TGAA‑TGTTGAC‑GCCGCCTTTGCAGAAGCCTTCATCACGCAATAGGTTGCGGTGCGGCGGGAGGTTgggcg > 2:1717566/1‑147 (MQ=255) gaaCCCCGGCCCTGTGCCGGGGTTCTGGTACATCACACTACACGATCACTCCTGGTTGGCCAGTTTGTGCTCGAGGTAG‑TGAA‑TGTTGAC‑GCCGCCTTTGCAGAAGCCTTCATCACGCACCAGGTCGCGGTGCAGCGGGATGTTGGTCtt > 2:1428578/2‑150 (MQ=255) aaaCCCCGGCACAGGGCCGGGGTTCTGGTACATCACACTACACGATCACTCCTGGTTGGCCAGTTTGTGCTCGAGGTAG‑TGAA‑TGTTGAC‑GCCGCCTTTGCAGAAGCCTTCATCACGCACCAGGTCGCGGTGCAGCGGGATGTTGGTCtt < 2:225311/150‑1 (MQ=255) aaCCCCGGCCCTGTGCCGGGGTTCTGGTACATCACACTACACGATCACTCCTGGTTGGCCAGTTTGTGCTCGAGGTAG‑TGAA‑TGTTGAC‑GCCGCCTTTGCAGAAGCCTTCATCACGCACCAGGTCGCGGTGCAGCGGGATGTTGGTCTTg > 1:2051908/1‑150 (MQ=255) aaCCCCGGCACAGGGCCGGGGTTCTGGTACATCACACTACACGATCACTCCTGGTTGGCCAGTTTGTGCTCGAGGTAG‑TGAA‑TGTTGAC‑GCCGCCTTTGCAGAAGCCTTCATCACGCACCAGGTCGCGGTGCAGCGGGATGt < 1:384629/142‑1 (MQ=255) aaCCCCGGCACAGGGCCGGGGTTCTGGTACATCACACTACACGATCACTCCTGGTTGGCCAGTTTGTGCTCGAGGTAG‑TGAA‑TGTTGAC‑GCCGCCTTTGCAGAAGCCTTCATCACGCACCAGGTCGCGGTGCAGCGGGATGt > 2:384629/1‑142 (MQ=255) ccccGGCCCTGTGCCGGGGTTCTGGTACATCACACTACACGATCACTCCTGGTTGGCCAGTTTGTGCTCGAGGTAG‑TGAA‑TGTTGAC‑GCCGCCTTTGCAGAAGCCTTCATCACGCACCAGGTCGCGGTGCAGCGGGATGTTGGTCTTGAt < 1:1428578/150‑1 (MQ=255) ccccGGCCCTGTGCCGGGGTTCTGGTACATCACACTACACGATCACTCCTGGTTGGCCAGTTTGTGCTCGAGGTAG‑TGAA‑TGTTGAC‑GCCGCCTTTGCAGAAGCCTTCATCACGCACCAGGTCGCGGTGCAGCGGGATGTTGGTCTTGAt > 2:2204032/1‑150 (MQ=255) ccccGGCCCTGTGCCGGGGTTCTGGTACATCACACTACACGATCACTCCTGGTTGGCCAGTTTGTGCTCGAGGTAG‑TGAA‑TGTTGAC‑GCCGCCTTTGCAGAAGCCTTCATCACGCACCAGGTCGCGGTGCAGCGGGATGTTGGTCTTGAt < 1:1792449/150‑1 (MQ=255) cccGGCACAGGGCCGGGGTTCTGGTACATCACACTACACGATCACTCCTGGTTGGCCAGTTTGTGCTCGAGGTAG‑TGAA‑TGTTGAC‑GCCGCCTTTGCAGAAGCCTTCATCACGCACCAGGTCGCGGTGCAGCGGGATGTTg < 1:2032593/141‑1 (MQ=255) ccGGCACAGGGCCGGGGTTCTGGTACATCACACTACACGATCACTCCTGGTTGGCCAGTTTGTGCTCGAGGTAG‑TGAA‑Tg > 2:1018939/1‑80 (MQ=255) ccGGCACAGGGCCGGGGTTCTGGTACATCACACTACACGATCACTCCTGGTTGGCCAGTTTGTGCTCGAGGTAG‑TGAA‑Tg < 1:1018939/80‑1 (MQ=255) ccGGCACAGGGCCGGGGTTCTGGTACATCACACTACACGATCACTCCTGGTTGGCCAGTTTGTGCTCGAGGTAG‑TGAA‑TGTTGAC‑GCCGCCTTTGCAGAAGCCTTCATCACGCACCAGGTCGCGGTGCAGCGGGATGTTGGTCTTGGTGc > 2:139507/1‑150 (MQ=255) cGGCACAGGGCCGGGGTTCTGGTACATCACACTACACGATCACTCCTGGTTGGCCAGTTTGTGCTCGAGGTAG‑TGAA‑TGTTGAC‑GCCGCCTTTGCAGAAGCCTTCATCACGCACCAGGTCGCGGTGCAGCGGGATGTTGGTCTTGATGcc < 2:2014764/150‑1 (MQ=255) acaGGGCCGGGGTTCTGGTACATCACACTACACGATCACTCCTGGTTGGCCAGTTTGTGCTCGAGGTAG‑TGAA‑TGTTGAC‑GCCGCCTTTGCAGAAGCCTTCATCACGCACCAGGTCGCGGTGCAGCGGGATGTTGGTCTTGATGCCGTcg > 1:1318672/1‑150 (MQ=255) caGGGCCGGGGTTCTGGTACATCACACTACACGATCACTCCTGGTTGGCCAGTTTGTGCTCGAGGTAG‑TGAA‑TGTTGAC‑GCCGCCTTTGCAGAAGCCTTCATCACGCACCAGGTCGCGGTGCAGCGGGATGTTGGTCTTGATGCCGTcga < 2:1294522/150‑1 (MQ=255) | CTGATGCGGCACGGGCTTTGGGCATTTCGCGGGCGACGCTTTATCGGCGAGTGCATGAGCACCGCATCGACATGCCGCGGATGAAGGGGTAGAGCCCTGGGGCCGCGACGCGGCCCCAGATTCTGGCAGGCAATAAAAAACCCCGGCACAGGGCCGGGGTTCTGGTACATCACACTACACGATCACTCCTGGTTGGCCAGTTTGTGCTCGAGGTAG‑TGAA‑TGTTGAC‑GCCGCCTTTGCAGAAGCCTTCATCACGCACCAGGTCGCGGTGCAGCGGGATGTTGGTCTTGATGCCGTCGA > NC_002947/648143‑648440 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |