| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 664,889 | C→T | 5.8% | A584A (GCC→GCT) | yfhM → | lipoprotein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 664,889 | 0 | C | T | 5.8% | 414.8 / 10.7 | 139 | A584A (GCC→GCT) | yfhM | lipoprotein |
| Reads supporting (aligned to +/- strand): ref base C (67/63); new base T (4/4); total (71/68) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.49e-01 | |||||||||||
Only 100 of 143 total aligned reads displayed.
CCAATTCGGCTCGGTCACCGAAACCGATCTGAACCAGGACCTGGAACTGGACGAAGTCACCCTTGACCAGGCCGGCAAGGCGGTGGTCGATATCGAAAGCCGTTGGGCCGAAGCCCGCTCTCCGCTGCAACTGACCGTGCAGGCCAGCCTGCAGGAGTCGGGTGGCCGGCCGATCACCCGGCGCCTGGAGCAGCCTATCTGGCCGGCTGAGCGCCTGCCGGGCCTGCGAGGCCTGTTCGAAGGTGAGGAGACCGATAGCGACGGGCCCGTGGAATTCGAGTTCCTGGTGGCC > NC_002947/664745‑665036 | ccAATTCGGCTCGGTCACCGAAACCGATCTGAACCAGGACCTGGAACTGGCCACTGAAACGGTTGACCAGGCCGGCAAGGCGGTGGTCGATATCGAAAGCCGTTGGGCCGAAGCCCGCTCTCCGCTGCAACTGACCGTGCAGGCCAGCCt > 2:1191762/1‑150 (MQ=255) aaTTCGGCTCGGTCACCGAAACCGATCTGAACCAGGACCTGGAACTGGACGAAGTCACCCTTGACCAGGCCGGCAAGGCGGTGGTCGATATCGAAAGCCGTTGGGCCGAAGCCCGCTCTCCGCTGCAACTGACCGTGCAGGCCAGCCTGc > 1:2323700/1‑150 (MQ=255) cTCGGTCACCGAAACCGATCTGAACCAGGACCTGGAACTGGACGAAGTCACCCTTGACCAGGCCGGCAAGGCGGTGGTCGATATCGAAAGCCGTTGGGCCGAAGCCCGCTCTCCGCTGCAACTGACCGTGCAGGCCAGCCTGCAGGAGTc > 2:1813677/1‑150 (MQ=255) tCGGTCACCGAAACCGATCTGAACCAGGACCTGGAACTGGACGAAGTCACCCTTGACCAGGCCGGCAAGGCGGTGGTCGATATCGAAAGCCGTTGGGCCGAAGCCCGCTCTCCGCTGCAACTGACCGTGCAGGCCAGCCTGCAGGAGTCg > 1:1626584/1‑150 (MQ=255) cGGTCACCGAAACCGATCTGAACCAGGACCTGGACCTGGCCGAAGTCCCCCTTGACCAGGCCGGCAAGGCGGTGGTCGATATCGAAAGCCGTTGGGCCGAAGCCCGCTCTCCGCTGCAACTGACCGTGCAGGTTTTTCTGCAGGAGTCgg < 1:1289422/150‑1 (MQ=255) tCACCGAAACCGATCTGAACCAGGACCTGGAACTGGACGAAGTCACCCTTGACCAGGCCGGCAAGGCGGTGGTCGATATCGAAAGCCGTTGGGCCGAAGCCCGCTCTCCGCTGCAACTGACCGTGCAGGCCAGCCTGCAg > 1:904295/1‑140 (MQ=255) aCCGAAACCGATCTGAACCAGGACCTGGAACTGGACGAAGTCACCCTTGACCAGGCCGGCAAGGCGGTGGTCGATATCGAAAGCCGTTGGGCCGAAGCCCGCTCTCCGCTGCAACTGACCGTGCAGGCCAGCCTGCAGGAGTCGGGTggc > 2:1802585/1‑150 (MQ=255) cGAAACCGATCTGAACCAGGACCTGGACCTGGACGAAGTCCACCTTGACCAGGACTACAATGCTGAGGTATATATCGAAAGCCGTTGGGCCGAAGCCCGCTCTCCGCTGCAACTGACCGTGCAGGCCAGCCTGCAGGAGTCGGGTggccg > 2:1480029/1‑150 (MQ=255) cGAAACCGATCTGAACCAGGACCTGGAACTGGACGAAGTCACCCTTGACCAGGCCTGCAAGGCGGTGGTCAATATCGAAAGCCGTTGGGCCGAAGCCCGCTCTCCGCTGCAACTGACCGTGCAGGCCAGCCTGCAGGAGTCGGGTggccg > 1:382794/1‑150 (MQ=255) aTCTGAACCAGGACCTGGAACTGGACGAAGTCACCCTTGACCAGGCCGGCAAGGCGGTGGTCGATATCGAAAGCCGTTGGGCCGAAGCCCGCTCTCCGCTGCAACTGACCGTGCAGGCCAGCCTGCAGGAGTCGGGTGGCCGGCCGa > 1:1287121/1‑147 (MQ=255) tCTGAACCAGGACCTGGAACTGGACGAAGTCACCCTTGACCAGGCCGGCAAGGCGGTGGTCGATATCGAAAGCCGTTGGGCCGAAGCCCGCTCTCCGCTGCAACTGACCGTGCAGGCCAGCCTGCAg < 1:984147/127‑1 (MQ=255) tGAACCAGGACCTGGAACTGGACGAAGTCACCCTTGACCAGGCCGGCAAGGCGGTGGTCGATATCGAAAGCCGTTGGGCCGAAGCCCGCTCTCCGCTGCAACTGACCGTGCAGGCCAGCCTGCAGGAGTCGGGTGGCCGGCCGATCAccc > 2:1308922/1‑150 (MQ=255) aaCCAGGACCTGGAACTGGACGAAGTCACCCTTGACCAGGCCGGCAAGGCGGTGGTCGATATCGAAAGCCGTTGGGCCGAAGCCCGCTCTCCGCTGCAACTGACCGTGCAGGCCAGCCTGCa < 1:2123965/122‑1 (MQ=255) aCCAGGACCTGGAACTGGACGAAGTCACCCTTGACCAGGCCGGCAAGGCGGTGGTCGATATCGAAAGCCGTTGGGCCGAAGCCCGCTCTCCGCTGCAACTGACCGTGCAGGCCAGCCTGCAGGAGTCGGGt < 2:277052/131‑1 (MQ=255) aCCAGGACCTGGAACTGGACGAAGTCACCCTTGACCAGGCCGGCAAGGCGGTGGTCGATATCGAAAGCCGTTGGGCCGAAGCCCGCTCTCCGCTGCAACTGACCGTGCAGGCCAGCCTGCAGGAGTCGGGTGGCCGGCCGATCACCCGgc > 1:1864299/1‑150 (MQ=255) cAGGACCTGGAACTGGACGAAGTCACCCTTGACCAGGCCGGCAAGGCGGTGGTCGATATCGAAAGCCGTTGGGCCGAAGCCCGCTCTCCGCTGCAACTGACCGTGCAGGCCAGCCTGCAGGCGTCGGCTggccggc > 1:2332986/1‑136 (MQ=255) aGGACCTGGAACTGGACGAAGTCACCCTTGACCAGGCCGGCAAGGCGGTGGTCGATATCGAAAGTCGTTGGGCCGAAGCCCGCTCTCCGCTGCAACTGACCGTGCAGGCCAGCCTGCAGGAGTCGGGTGGCCGGCCGATCACCCGGCGcc > 2:67307/1‑150 (MQ=255) ggATCTGGAGATGGACGAAGTCACCTTTGACCAGTACGGAAAGGTGGTGGGCGATATCGAAAGCCGTTGGGCCGAAGCCCGCTCGCCGCTGCAACTGACCGTGCAGGCCAGCCTGCAGGAGTCGGGTGGCCGGCCGATTCCCCGGCGCCt < 2:371736/150‑1 (MQ=255) ggACCTGGAACTGGACGAAGTCACCCTTGACCAGGCCGGCAAGGCGGTGGTCGATATCGAAAGCCGTTGGGCCGAAGCCCGCTCTCCGCTGCAACTGACCGTGCAGGCTGGCCTGCac > 2:2270337/1‑117 (MQ=255) ccTGGAACTGGACGAAGTCACCCTTGACCAGGCCGGCAAGGCGGTGGTCGATATCGAAAGCCGTTGGGCCGAAGCCCGCTCTCCGCTGCAACTGACCGTGCAGGCCAGCCTGCAGGAGTCGGGTGGCCGGCCGATCACCCGGCGCCTGGa < 2:1951614/150‑1 (MQ=255) ccTGGAACTGGACGAAGTCACCCTTGACCAGGCCGGCAAGGCGGTGGTCGATATCGAAAGCCGTTGGGCCGAAGCCCGCTCTCCGCTGCAACTGACCGTGCAGGCCAGCCTGCAGGAGTCGGGTGGCCGGCCGATCACCCGGCGCCTGGa < 1:1802585/150‑1 (MQ=255) tGGAACTGGACGAAGTCACCCTTGACCAGGCCGGCAAGGCGGTGGTCGATATCGAAAGCCGTTGGGCCGAAGCCCGCTCTCCGCTGCAACTGACCGTGCAGGCCAGCCTGCAGGAGTCGGGTGGCCGGCCGATCACCCGGCGCCTGGagc > 1:345879/1‑150 (MQ=255) ggAACTGGACGAAGTCACCCTTGACCAGGCCGGCAAGGCGGTGGTCGATATCGAAAGCCGTTGGGCCGAAGCCCGCTCTCCGCTGCAACTGACCGTGCAGGCCAGCCTGCAGGAGTCGGGTGGCCGGCCGATCACCCGGCGCCTGGagca > 1:890561/1‑150 (MQ=255) aaCTGGACGAAGTCACCCTTGACCAGGCCGGCAAGGCGGTGGTCGATATCGAAAGCCGTTGGGCCGAAGCCCGCTCTCCGCTGCAACTGACCGTGCAGGCCAGCCTGCAGGAGTCGGGTGGCCGGCCGATCACCCGGCGCCTGGagcagc < 2:2115565/150‑1 (MQ=255) tGGACGAAGTCACCCTTGACCAGGCCGGCAAGGCGGTGGTCGATATCGAAAGCCGTTGGGCCGAAGCCCGCTCTCCGCTGCAACTGACCGTGCAGGCCAGCCTGCAGGAGTCGGGTGGCCGGCCGATCACCCGGCGCCTGGAGCAGCCTa > 1:2042557/1‑150 (MQ=255) gACGAAGTCACCCTTGACCAGGCCGGCAAGGCGGTGGTCGATATCGAAAGCCGTTGGGCCGAAGCCCGCTCTCCGCTGCAACTGACCGTGCAGGCCAGCCTGCAGGAGTCGGGTGGCCGGCCGATCACCCGGCGCCTGGAGCAGCCTATc > 1:1112175/1‑150 (MQ=255) aaGTCACCCTTGACCAGGCCGGCAAGGCGGTGGTCGATATCGAAAGCCGTTGGGCCGAAGCCCGCTCTCCGCTGCAACGGACCGTGCAGGCCAGCCTGCAGGAGTCGGGGGGCCGGGCGATCACCCGGCGCCTGGAGCAGCCTATCTGGc > 1:162236/1‑150 (MQ=255) gTCACCCTTGACCAGGCCGGCAAGGCGGTGGTCGATATCGAAAGCCGTTGGGCCGAAGCCCGCTCTCCGCTGCAACTGACCGTGCAGGCCAGCCTGCAGGAGTCGGGTGGCCGGCCGATCACCCGGCGCCTGGAGCAGCCTATCTGGCCg > 2:730140/1‑150 (MQ=255) ccccTCGAACAGGCCGGCAAGGCGGTGGTCGATATCGAAAGCCGTTGGGCCGAAGCCCGCTCTCCGCTGCAACTGACCGTGCAGGCCAGCCTGCAGGAGTCGGGTGGCCGGCCGATCACCCGGCGCCTGGAGCAGCCTATCTGGCCGGCt < 2:1378849/149‑1 (MQ=255) aCCCTTGACCAGGCCGGCAAGGCGGTGGTCGATATCGAAAGCCGTTGGGCCGAAGCCCGCTCTCCGCTGCAACTGACCGTGCAGGCCAGCCTGCAGGCGCCGGGTGATCGGCCGGCCACCCgactc < 2:36947/126‑5 (MQ=38) ccTTGACCAGGCCGGCAAGGCGGTGGTCGATATCGAAAGCCGTTGGGCCGAAGCCCGCTCTCCGCTGCAACTGACCGTGCAGGCCAGCCTGCAGGAGTCGGGTGGCCGGCCGATCACCCg > 2:1306932/1‑120 (MQ=255) ccTTGACCAGGCCGGCAAGGCGGTGGTCGATATCGAAAGCCGTTGGGCCGAAGCCCGCTCTCCGCTGCAACTGACCGTGCAGGCCAGCCTGCAGGAGTCGGGTGGCCGGCCGATCACCCg < 1:1306932/120‑1 (MQ=255) ccTTGACCAGGCCGGCAAGGCGGTGGTCGATATCGAAAGCCGTTGGGCCGAAGCCCGCTCTCCGCTGCAACTGACCGTGCAGGCCAGCCTGCAGGAGTCGGGTGGCCGGCCGATCACCCGGCGCCTGGAGCAGCCTATCTGGCCGGCTGa > 1:209465/1‑150 (MQ=255) ccTTGACCAGGCCGGCAAGGCGGTGGTCGATATCGAAAGCCGTTGGGCCGAAGCCCGCTCTCCGCTGCAACTGACCGTGCAGGCCAGCCTGCAGGAGTCGGGTGGCCGGCCGATCACCCGGCGCCTGGAGCAGCCTATCTGGCCGGCTGa > 2:952142/1‑150 (MQ=255) aGGCCGGCAAGGCGGTGGTCGATATCGAAAGCCGTTGGGCCGAAGCCCGCTCTCCGCTGCAACTGACCGTGCAGGCCAGCCTGCAGGAGTCGGGTGGCCGGCCGATCACCCGGCGCCTGGAGCAGCCTATCTGGCCGGCTGAGCGCCTGc > 2:1550898/1‑150 (MQ=255) ggCCGGCAAGGCGGTGGTCGATATCGAAAGCCGTTGGGCCGAAGCCCGCTCTCCGCTGCAACTGACCGTGCAGGCCAGCCTGCAg > 1:10864/1‑85 (MQ=255) gCCGGCAAGGCGGTGGTCGATATCGAAAGCCGTTGGGCCGAAGCCCGCTCTCCGCTGCAACTGACCGTGCAGGCCAGCCTGCAGGAGTCGGGTGGCCGGCCGATCACCCGGCGCCTGGAGCAGCCTATCTGGCCGGCTGAGCGCCTGCCg < 1:2006716/150‑1 (MQ=255) cGGCAAGGCGGTGGTCGATATCGAAAGCCGTTGGGCCGAAGCCCGCTCTCCGCTGCAACTGACCGTGCAGGCCAGCCTGCAGGAGTCGGGTGGCCGGCCGATCACCCGGCGCCTGGAGCAGCCTATCTGGCCGGCTGAGCGCCTGCCggg > 1:2197805/1‑150 (MQ=255) cGGCAAGGCGGTGGTCGATATCGAAAGCCGTTGGGCCGAAGCCCGCTCTCCGCTGCAACTGACCGTGCAGGCCAGCCCGCACCCGCCCCGTGGCCGGCCGATCACCCGGCGCCTCGCGCAGCCTATCTCGCCGGCTCAGCGCCTCCCggg > 2:686951/1‑150 (MQ=255) cAAGGCGGTGGTCGATATCGAAAGCCGTTGGGCCGAAGCCCGCTCTCCGCTTCAACTGACCGTGCAGGCCAGCCTGCAGGAGTCGGGTGGCCGGCCGATCACCCGGCGCCTGGAGCAGCCTATCTGGCCGGCTGAGCGCCTGCCGGGCCt < 1:1966701/150‑1 (MQ=255) aaGGCGGTGGTCGATATCGAAAGCCGTTGGGCCGAAGCCCGCTCTCCGCTGCAACTGACCGTGCAGGCCAGCCTGCAGGAGTCGGGTGGCCGGCCGATCACCCGGCGCCTGGAGCAGCCTATCTGGCCGGCTGAGCGCCTGCCGGGCCTg > 1:527844/1‑150 (MQ=255) gCGGTGGTCGATATCGAAAGCCGTTGGGCCGAAGCCCGCTCTCCGCTGCAACTGACCGTGCAGGCCAGCCTGCAGGAGTCGGGTGGCCGGCCGATCACCCGGCGCCTGGAGCAGCCTATCTGGCCGGCTGAGCGCCTGCCTGGCCTGCGa < 2:890561/150‑1 (MQ=255) gCGGTGGTCGATATCGAAAGCCGTTGGGCCGAAGCCCGCTCTCCGCTGCAACTGACCGTGCAGGCCAGCCTGCAGGAGTCGGGTGGCCGGCCGATCACCCGGCGCCTGGAGCAGCCTATCTGGCCGGCTGAGCGCCTGCCGGGCCTGCGa < 1:952142/150‑1 (MQ=255) ggtCGATATCGAAAGCCGTTGGGCCGAAGCCCGCTCTCCGCTGCAACTGACCGTGCAGGCCAGCCTGCAGGAGTCGGGTGGCCGGCCGATCACCCGGCGCCTGGAGCAGCCTATCTGGCCGGCTGAGCGCCTGCCGGGCCTGCGAGGCCt < 2:1440129/150‑1 (MQ=255) gtagATATCGAAAGCCGTTGGGCCGAAGCCCGCTCTCCGCTGCAACTGACCGTGCAGGCCAGCCTGCAGGAGTCGGGTGGCCGGCCGATCACCCGGCGCCTGGAGCAGCCTATCTGGCCGGCTGAGCGCCTGCCGGGCCTGCGAGGCCTg > 2:1799848/4‑150 (MQ=255) gtCGATATCGAAAGCCGTTGGGCCGAAGCCCGCTCTCCGCTGCAACTGACCGTGCAGGCCAGCCTGCAGGAGTCGGGTGGCCGGCCGATCACCCGGTGCCTGGAGCAGCCTATCTGGCCGGCTGAGCGCCTGCCGGGCCTGCGAGGCCTg > 2:1656118/1‑150 (MQ=255) gtCGATATCGAAAGCCGTTGGGCCGAAGCCCGCTCTCCGCTGCAACTGACCGTGCAGGCCAGCCTGCAGGAGTCGGGTGGCCGGCCGATCACCCGGCGCCTGGa < 2:235656/104‑1 (MQ=255) gATATCGAAAGCCGTTGGGCCGAAGCCCGCTCTCCGCTGCAACTGACCGTGCAGGCCAGCCTGCAGGAGTCGGGTGGCCGGCCGATCACCCGGCGCCTGGAGCAGCCTATCTGGCCGGCTGAGCGCCTGCCGGGCCTGCGAg > 2:1859832/1‑142 (MQ=255) gATATCGAAAGCCGTTGGGCCGAAGCCCGCTCTCCGCTGCAACTGACCGTGCAGGCCAGCCTGCAGGAGTCGGGTGGCCGGCCGATCACCCGGCGCCTGGAGCAGCCTATCTGGCCGGCTGAGCGCCTGCCGGGCCTGCGAg < 1:1859832/142‑1 (MQ=255) gATATCGAAAGCCGTTGGGCCGAAGCCCGCTCTCCGCTGCAACTGACCGTGCAGGCCAGCCTGCAGGAGTCGGGTGGCCGGCCGATCACCCGGCGCCTGGAGCAGCCTATCTGGCCGGCTGAGCGCCTGCCGGGCCTGCGAGGCCTGTTc > 2:1987597/1‑150 (MQ=255) atatCGAAAGCCGTTGGGCCGAAGCCCGCTCTCCGCTGCAACTGACCGTGCAGGCTGGCCTGc > 1:1928526/1‑63 (MQ=255) atatCGAAAGCCGTTGGGCCGAAGCCCGCTCTCCGCTGCAACTGACCGTGCAGGCTGGCCTGc < 2:1928526/63‑1 (MQ=255) tatCGAAAGCCGTTGGGCCGAAGCCCGCTCTCCGCTGCAACTGACCGTGCAGGCCAGCCTGCAGGAGTCGGGTGGCCGGCCGATCACCCGGCGCCTGGAGCAGCCTATCTGGCCGGCTGAGCGCCTGCCGGGCCTGCGAGGCCTGTTCGa < 2:2365759/150‑1 (MQ=255) atCGAAAGCCGTTGGGCCGAAGCCCGCTCTCCGCTGCAACTGACCGTGCAGGCCAGCCTGCAGGAGTCGGGTGGCCGGCCGATCACCCGGCGCCTGGAGCAGCCTATCTGGCCGGCTGAGCGCCTGCCGGGCCTGCGAGGCCTGTTCGaa > 2:511391/1‑150 (MQ=255) atCGAAAGCCGTTGGGCCGAAGCCCGCTCTCCGCTGCAACTGACCGTGCAGGCCAGCCTGCAGGAGTCGGGTGGCCGGCCGATCACCCGGCGCCTGGAGCAGCCTATCTGGCCGGCTGAGCGCCTGCCGGGCCTGCGAGGCCTGTTCGaa > 2:2013077/1‑150 (MQ=255) atCGAAAGCCGTTGGGCCGAAGCCCGCTCTCCGCTGCAACTGACCGTGCAGGCCAGCCTGCAGGAGTCGGGTGGCCGGCCGATCACCCGGCGCCTGGAGCAGCCTATCTGGCCGGCTGAGCGCCTGCCGGGCCTGCGAGGCCTGTTCGaa < 1:1480029/150‑1 (MQ=255) tCGAAAGCCGTTGGGCCGAAGCCCGCTCTCCGCTGCAACTGACCGTGCAGGCCAGCCTGCAGGAGTCGGGTGGCCGGCCGATCACCCGGCGCCTGGAGCAGCCTATCTGGCCGGCTGAGCGCCTGCCGGGCCTGCGAGGCCTGTTCGAAg < 1:404049/150‑1 (MQ=255) aaGCCGTTGGGCCGAAGCCCGCTCTCCGCTGCAACTGACCGTGCAGGCCAGCCTGCAGGAGTCGGGTGGCCGGCCGATCACCCGGTGCCTGGAGCAGCCTATCTGGCCGGCTGAGCGCCTGCCGGGCCTGCGAGGCCTGTTCGAAGGTga < 1:1656118/150‑1 (MQ=255) aaGCCGTTGGGCCGAAGCCCGCTCTCCGCTGCAACTGACCGTGCAGGCCAGCCTGCAGGAGTCGGGTGGCCGGCCGATCACCCGGCGCCTGGAGCAGCCTATCTGGCCGGCTGAGCGCCTGCCGGGCCTGCGAGGCCTGTTCGAAGGTga < 2:1864299/150‑1 (MQ=255) ggCCGTTGGGCCGAAGCCCGCTCTCCGCTGCAACTGACCGTGCAGGCCAGCCTGCAGGAGTCGGGTGGCCGGCCGATCACCCGACGCCTGGAGCAGCCTATCTGGCCGGCTGAGCGCCTGCCGGGCCTGCGAGGCCTGTTCGAAGGTgag < 1:862128/149‑1 (MQ=255) aGCCGTTGGGCCGAAGCCCGCTCTCCGCTGCAACTGACCGTGCAGGCCAGCCTGCAGGAGTCGGGTGGCCGGCCGATCACCCGGCGCCTGGAGCAGCCTATCTGGCCGGCTGAGCGCCTGCCGGGCCTGCGAGGCCTGTTCGAAGGTgag < 1:1385822/150‑1 (MQ=255) aGCCGTTGGGCCGAAGCCCGCTCTCCGCTGCAACTGACCGTGCAGGCCAGCCTGCAGGAGTCGGGTGGCCGGCCGATCACCCGGCGCCTGGAGCAGCCTATCTGGCCGGCTGAGCGCCTGCCGGGCCTGCGAGGCCTGTTCGAAGGTgag < 1:253885/150‑1 (MQ=255) aGCCGTTGGGCCGAAGCCCGCTCTCCGCTGCAACTGACCGTGCAGGCCAGCCTGCAGGAGTCGGGTGGCCGGCCGATCACCCGGCGCCTGGAGCAGCCTATCTGGCCGGCTGAGCGCCTGCCGGGCCTGCGAGGCCTGTTCGAAGGTgag < 1:1308922/150‑1 (MQ=255) gCCGTTGGGCCGAAGCCCGCTCTCCGCTGCAACTGACCGTGCAGGCCAGCCTGCAGGAGTCGGGTGGCCGGCCGATCACCCGGCGCCTGGAGCAGCCTATCTGGCCGGCTGAGCGCCTGCCGGGCCTGCGAGGCCTGTTCGAAGGTgagg > 1:1042287/1‑150 (MQ=255) ccGTTGGGCCGAAGCCCGCTCTCCGCTGCAACTGACCGTGCAGGCCAGCCTGCAGGAGTCGGGTGGCCGGCCGATCACCCGGCGCCTGGAGCAGCCTATCTGGCCGGCTGAGCGCCTGCCGGGCCTGCGAGGCCTGTTCGAAGGTgagga < 2:527844/150‑1 (MQ=255) ccGTTGGGCCGAAGCCCGCTCTCCGCTGCAACTGACCGTGCAGGCCAGCCTGCAGGAGTCGGGTGGCCGGCCGATCACCCGGCGCCTGGAGCAGCCTATCTGGCCGGCTGAGCGCCTGCCGGGCCTGCGAGGCCTGTTCGAAGGTgagga < 1:2369343/150‑1 (MQ=255) ccGAAGCCCGCTCTCCGCTGCACCGGACCGTGCAGGCCAGCCTGCAGGAGTCTGGTGGCCGCCCGACCACCCGACGCCTGCAGCAGCCTATCTGGCCGGCTGAGCGCCTGCCGGGCCTGCGAGGCCTGTTCGAAGGTGAGGAGACCGATa < 1:1746996/150‑1 (MQ=255) ccGCTCTCCGCTGCAACTGACCGTGCAGGCCAGCCTGCAGGAGTCGGGTGGCCGGCCGATCACCCGGCGCCTGGAGCAGCCTATCTGGCCGGCTGAGCGCCTGCCGGGCCTGCGAGGCCTGTTCGAAGGTGAGGAGACCGATAGCGACgg > 1:113876/1‑150 (MQ=255) ccGCTCTCAGCTGCAACGGAGGGTGCAGCAGCGCCTGCAGGAGTCGGGTGGCCGGCCGATCACCCGGCGCCTGGAGCAGCCTATCTGGCCGGCTGAGCGCCTGCCGGGCCTGCGAGGCCTGTTCGAAGGTGAGGAGACCGATAGCGACgg < 2:2323700/150‑1 (MQ=255) cGCTCTCCGCTGCAACTGACCGTGCAGGCCAGCCTGc > 1:670304/1‑37 (MQ=255) cGCTCTCCGCTGCAACTGACCGTGCAGGCCAGCCTGc < 2:670304/37‑1 (MQ=255) tctcCGCTGCAACTGACCGTGCAGGCCAGCCTGCAGGAGTCGGGTGGCCGGCCGATCACCCGGCGCCTGGAGCAGCCTATCTGGCCGGCTGAGCGCCTGCCGGGCCTGCGAGGCCTGTTCGAAGGTGAGGAGACCGATAGCGACGGGccc > 2:1146019/1‑150 (MQ=255) tcCGCTGCAACTGACCGTGCAGGCCAGCCTGCAGGAGTCGGGTGGCCGGCCGATCACCCGGCGCCTGGagcagc > 1:2256414/1‑74 (MQ=255) tcCGCTGCAACTGACCGTGCAGGCCAGCCTGCAGGAGTCGGGTGGCCGGCCGATCACCCGGCGCCTGGagcagc < 2:2256414/74‑1 (MQ=255) tcCGCTGCAACTGACCGTGCAGGCCAGCCTGCAGGAGTCGGGTGGCCGGCCGATCACCCGGCGCCTGGa > 2:1733050/1‑69 (MQ=255) tcCGCTGCAACTGACCGTGCAGGCCAGCCTGCAGGAGTCGGGTGGCCGGCCGATCACCCGGCGCCTGGAGCAGTCTATCTGGCCGGCTGAGCGCCTGCCGGGCCTGCGAGGCCTGTTCGAAg > 1:1491096/1‑122 (MQ=255) tcCGCTGCAACTGACCGTGCAGGCCAGCCTGCAGGAGTCGGGTGGCCGGCCGATCACCCGGCGCCTGGAGCAGCCTATCTGGCCGGCTGAGCGCCTGCCGGGCCTGCGAGGCCTGTTCGAAGGTGAGGAGAc < 1:328799/132‑1 (MQ=255) tcCGCTGCAACTGACCGTGCAGGCCAGCCTGCAGGAGTCGGGTGGCCGGCCGATCACCCGGCGCCTGGAGCAGCCTATCTGGCCGGCTGAGCGCCTGCCGGGCCTGCGAGGCCTGTTCGAAGGTGAGGAGAc > 2:328799/1‑132 (MQ=255) tcCGCTGCAACTGACCGTGCAGGCCAGCCTGCAGGAGTCGGGTGGCCGGCCGATCACCCGGCGCCTGGAGCAGCCTATCTGGCCGGCTGAGCGCCTGCCGGGCCTGCGAGGCCTGTTCGAAGGTGAGGAGACCGATAGCGACGGGCCCGt < 1:1191762/150‑1 (MQ=255) ccGCTGCAACTGACCGTGCAGGCCAGCCTGCAGGAGTCGGGTGGCCGGCCGATCACCCGGCGCCTGGAGCAGCCTATCTGGCCGGCTGAGCGCCTGCCGGGCCTGCGAGGCCTGTTCGAAGGTGAGgaga < 2:1984086/130‑1 (MQ=255) ccGCTGCAACTGACCGTGCAGGCCAGCCTGCAGGAGTCGGGTGGCCGGCCGATCACCCGGCGCCTGGAGCAGCCTATCTGGCCGGCTGAGCGCCTGCCGGGCCTGCGAGGCCTGTTCGAAGGTGAGGAGACCGATAGCGACGGGCCCGTg < 2:2099799/150‑1 (MQ=255) ccGCTGCAACTGACCGTGCAGGCCAGCCTGCAGGAGTCGGGTGGCCGGCCGATCACCCGGCGCCTGGAGCAGCCTATCTGGCCGGCTGAGCGCCTGCCGGGCCTGCGAGGCCTGTTCGAAGGTGAGGAGACCGATAGCGACGGGCCCGTg < 1:867775/150‑1 (MQ=255) aaCTGACCGTGCAGGCCAGCCTGCAGGAGTCGGGTGGCCGGCCGATCACCCGGCGCCTGGAGCAGCCTATCTGGCCGGCTGAGCGCCTGCCGGGCCTGCGAGGCCTGTTCGAAGGTGAGGAGAcc < 2:291499/125‑1 (MQ=255) aaCTGACCGTGCAGGCCAGCCTGCAGGAGTCGGGTGGCCGGCCGATCACCCGGCGCCTGGAGCAGCCTATCTGGCCGGCTGAGCGCCTGCCGGGCCTGCGAGGCCTGTTCGAAGGTGAGGAGAcc > 1:291499/1‑125 (MQ=255) aaCTGACCGTGCAGGCCAGCCTGCAGGAGTCGGGTGGCCGGCCGATCACCCGGCGCCTGGAGCAGCCTATCTGGCCGGCTGAGCGCCTGCCGGGCCTGCGAGGCCTGTTCGAAGGTGAGGAGACCGATAGCGACGGGCCCGTGGAATTCg > 2:415529/1‑150 (MQ=255) aCTGACCGTGCAGGCCAGCCTGCAGGAGTCGGGTGGCCGGCCGATCACCCGGCGCCTGGAGCAGCCTATCTGGCCGGCTGAGCGCCTGCCGGGCCTGCGAGGCCTGTTCGAAGGTGAGGAGACCGATAGCGACGGGCCCGTGGAATTCGa < 2:162236/150‑1 (MQ=255) aCTGACCGTGCAGGCCAGCCTGCAGGAGTCGGGTGGCCGGCCGATCACCCGGCGCCTGGAGCAGCCTATCTGGCCGGCTGAGCGCCTGCCGGGCCTGCGAGGCCTGTTCGAAGGTGAGGAGACCGATAGCGACGGGCCCGTGGAATTCGa < 2:1272780/150‑1 (MQ=255) cTGACCGTGCAGGCCAGCCTGCAGGAGTCGGGTGGCCGGCCGATCACCCGGCGCCTGGAGCAGCCTATCTGGCCGGCTGAGCGCCTGCCGGGCCTGCGAGGCCTGTTCGAAGGTGAGGAGAc < 2:882109/122‑1 (MQ=255) tcctGCAGGCTGGCCTGCAGGAGTCGGGTGGCCGGCCGATCACCCGGCGCCTGGAGCAGCCTATCTGGCCGGCTGAGCGCCTGCCGGGCCTGCGAGGCCTGTTCGAAGGTGAGGAGACCGATAGTGACGGGCCCGTGGAATTCGAGTTcc > 2:818992/4‑150 (MQ=255) tcctGCAGGCTGGCCTGCAGGAGTCGGGTGGCCGGCCGATCACCCGGCGCCTGGAGCAGCCTATCTGGCCGGCTGAGCGCCTGCCGGGCCTGCGAGGCCTGTTCGAAGGTGAGGAGACCGATAGCGACGGGCCCGTGGAATTCGAGTTcc > 2:111763/4‑150 (MQ=255) cGTGCAGGCCAGCCTGCAGGAGTCGGGTGGCCGGCCGATCACCCGGCGCCTGGAGCAGCCTATCTGGCCGGCTGAGCGCCTGCCGGGCCTGCGAGGCCTGTTCGAAGGTGAGGAGACCGATAGCGACGGGCCCGTGGAATTc < 2:947726/142‑1 (MQ=255) gTGCAGGCCAGCCTGCAGGAGTCGGGTGGCCGGCCGATCACCCGGCGCCTGGAGCAGCCTATCTGGCCGGCTGAGCGCCTGCCGGGCCTGCGAGGCCTGTTCGAAGGTGAGGAGACCGATAGCGACGGGCCCGTGGAATTCGAGTTCCtg < 1:2013077/150‑1 (MQ=255) tGCAGGCCAGCCTGCAGGAGTCGGGTGGCCGGCCGATCACCCGGCGCCTGGAGCAGCCTATCTGGCAGGCTGAGCGCCTGCCGGGCCTGCGAGGCCTGTTCGAAGGTGAGGAGACCGATAGCGACGGGCCCGTGGAATTCGAGTTCCtgg < 1:730140/150‑1 (MQ=255) ccggCCAGCCTGCAGGAGTCGGGTGGCCGGCCGATCACCCGGCGCCTGGAGCAGCCTATCTGGCCGGCTGAGCGCCTGCCGGGCCTGCGAGGCCTGTTCGAAGGTGAGGAGACCGATAGCGACGGGCCCGTGGAATTCGAGTTCCtggtg < 1:1424461/148‑1 (MQ=255) gCCAGCCTGCAGGAGTCGGGTGGCCGGCCGATCACCCGGCGCCTGGAGCAGCCTATCTGGCCGGCTGAGCGCCTGCCGGGCCTGCGAGGCCTGTTCGAAGGTGATGAGCCCGATAGCGACGGGGCCGTGGGATTGGAGATCCTGGTGGcc > 1:1434701/1‑150 (MQ=255) gCCAGCCTGCAGGAGTCGGGTGGCCGGCCGATCACCCGGCGCCTGGAGCAGCCTATCTGGCCGGCTGAGCGCCTGCCGGGCCTGCGAGGCCTGTTCGAAGGTGAGGAGACCGATCGCGACGTGCTCTTGGAATTCTAGTTCCTGGTGGcc > 2:1229908/1‑150 (MQ=255) gCCAGCCTGCAGGAGTCGGGTGGCCGGCCGATCACCCGGCGCCTGGAGCAGCCTATCTGGCCGGCTGAGCGCCTGCCGGGCCTGCGAGGCCTGTTCGAAGGTGAGGAGACCGATAGCGACGGGCCCGTGGAATTCGAGTTCCTGGTGGcc > 2:79143/1‑150 (MQ=255) cAGCCTGCAGGAGTCGGGTGGCCGGCCGATCACCCGGCGCCTGGAGCAGCCTATCTGGCCGGCTGa < 2:2025727/66‑1 (MQ=255) cAGCCTGCAGGAGTCGGGTGGCCGGCCGATCACCCGGCGCCTGGAGCAGCCTATCTGGCCGGCTGAGCGCCTGCCGGGCCTGCGAGGCCTGTTCGAAGGTGAGGAGACCGATAGCGACGGGCCCGTGGAAt < 2:1982486/131‑1 (MQ=255) cAGCCTGCAGGAGTCGGGTGGCCGGCCGATCACCCGGCGCCTGGAGCAGCCTATCTGGCCGGCTGAGCGCCTGCCGGGCCTGCGAGGCCTGTTCGAAGGTGAGGAGACCGATAGCGACGGGCCCGTGGAAt > 1:1982486/1‑131 (MQ=255) | CCAATTCGGCTCGGTCACCGAAACCGATCTGAACCAGGACCTGGAACTGGACGAAGTCACCCTTGACCAGGCCGGCAAGGCGGTGGTCGATATCGAAAGCCGTTGGGCCGAAGCCCGCTCTCCGCTGCAACTGACCGTGCAGGCCAGCCTGCAGGAGTCGGGTGGCCGGCCGATCACCCGGCGCCTGGAGCAGCCTATCTGGCCGGCTGAGCGCCTGCCGGGCCTGCGAGGCCTGTTCGAAGGTGAGGAGACCGATAGCGACGGGCCCGTGGAATTCGAGTTCCTGGTGGCC > NC_002947/664745‑665036 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |