| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 718,450 | A→G | 9.1% | intergenic (+17/+60) | thiO → / ← PP_0613 | FAD‑dependent glycine/D‑amino acid oxidase/amidase family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 718,450 | 0 | A | G | 9.1% | 283.8 / 13.0 | 108 | intergenic (+17/+60) | thiO/PP_0613 | FAD‑dependent glycine/D‑amino acid oxidase/amidase family protein |
| Reads supporting (aligned to +/- strand): ref base A (42/56); new base G (6/4); total (48/60) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.34e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.81e-01 | |||||||||||
Only 100 of 111 total aligned reads displayed.
GAACTGCGGGCATTATCGCAATGGGCTGGTGCTGGCGCCGGCTTCGTGCCAGCTGTTTACCGATTTGCTGACAGGGGCCGAGCCGATTATCGACCCGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCGCTC‑C‑TACGCGAGCGGGTTTACCCGCGAAAGGGCCGCAGAAGCCAATACAGATTTCAGCCAGTAATCGGTGCTTGCAGGTGCCGGCTCGGATAATGCTGCTCATACACCTTGCACACCCGCAGCACTTGCTCATCAGCAAAG > NC_002947/718304‑718597 | gAACTGCGGGCATTATCGCAATGGGCTGGTGCTGGCGCCGGCTTCGTGCCAGCTGTTTACCGATTTGCTGACAGGGGCCGAGCCGATTATCGACCCGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAAC < 2:851235‑M1/150‑1 (MQ=255) tGCGGGCATTATCGCAATGGGCTGGTGCTGGCGCCGGCTTCGTGCCAGCTGTTTACCGATTTGCTGACAGGGGCCGAGCCGATTATCGACCCGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCGC < 2:1287919‑M1/150‑1 (MQ=255) gggCATTATCGCAATGGGCTGGTGCTGGCGCCGGCTTCGTGCCAGCTGTTTACCGATTTGCTGACAGGGGCCGAGCCGATTATCGACCCGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCGCTC‑C > 2:2369197‑M1/1‑150 (MQ=255) gggCATTATCGCAATGGGCTGGTGCTGGCGCCGGCTTCGTGCCAGCTGTTTACCGATTTGCTGACAGGGGCCGAGCCGATTATCGACCCGGCGCCGTATGCGCCAGAAGGGCGTATGGGCTAAGGAACTCTTCACAGGTAAACCCGcgcg > 2:1945276/1‑147 (MQ=255) cATTATCGCAATGGGCTGGTGCTGGCTCCGGCTTCGTGCCAGCTGTTTACCGATTTGCTGACAGGGGCCGAGCCGATTATCGACTCGGCGCCGTATGCGCCAGAAGGTTGTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCGCTC‑C‑TAc < 2:585317/150‑1 (MQ=255) cATTATCGCAATGGGCTGGTGCTGGCGCCGGCTTCGTGCCAGCTGTTTACCGATTTGCTGACAGGGGCCGAGCCGATTATCGACCCGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCGCTC‑C‑TAc < 2:1164504/150‑1 (MQ=255) cATTATCGCAATGGGCTGGTGCTGGCGCCGGCTTCGTGCCAGCTGTTTACCGATTTGCTGACAGGGGCCGAGCCGATTATCGACCCGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCGCTC‑C‑TAc < 2:2128605/150‑1 (MQ=255) cATTATCGCAATGGGCTGGTGCTGGCGCCGGCTTCGTGCCAGCTGTTTACCGATTTGCTGACAGGGGCCGAGCCGATTATCGACCCGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCGCTC‑C‑TAc < 2:668501/150‑1 (MQ=255) ttATCGCAATGGGCTGGTGCTGGCGCCGGCTTCGTGCCAGCTGTTTACCGATTTGCTGACAGGGGCCGAGCCGATTATCGACCCGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCGCTCgcgtag < 2:198853‑M1/150‑7 (MQ=255) tATCGCAATGGGCTGGTGCTGGCGCCGGCTTCGTGCCAGCTGTTTACCGATTTGCTGACAGGGGCCGAGCCGATTATCGACCCGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAAACCGCCC‑C‑TACGCg < 2:155081‑M2/150‑2 (MQ=255) cAATGGGCTGGTGCTGGCGCCGGCTTCGTGCCAGCTGTTTACCGATTTGCTGACAGGGGCCGAGCCGATTATCGACCCGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCGCTCgcgtaggagcgg < 2:510527‑M1/150‑13 (MQ=255) aaTGGGCTGGTGCTGGCGCCGGCTTCGTGCCAGCTGTTTACCGATTTGCTGACAGGGGCCGAGCCGATTATCGACCCGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGCGGCCCT‑TTCGCGGGTAAACCCGCTCgcgtaggagcgggt < 1:553510‑M1/150‑15 (MQ=255) aaTGGGCTGGTGCTGGCGCCGGCTTCGTGCCAGCTGTTTACCGATTTGCTGACAGGGGCCGAGCCGATTATCGACCCGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCGCTCgcgtaggagcggg < 1:2018612‑M1/150‑14 (MQ=255) aTGGGCTGGTGCTGGCGCCGGCTTCGTGCCAGCTGTTTACCGATTTGCTGACAGGGGCCGAGCCGATTATCGACCCGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCGCTCgcgtaggagcgggt < 1:1945276‑M1/150‑15 (MQ=255) aTGGGCTGGTGCTGGCGCCGGCTTCGTGCCAGCTGTTTACCGATTTGCTGACAGGGGCCGAGCCGATTATCGACCCGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCGCTCgcgtaggagcgggt < 1:1687680‑M1/150‑15 (MQ=255) gggCTGGTGCTGGCGCCGGCTTCGTGCCAGCTGTTTACCGATTTGCTGACAGGGGCCGAGCCGATTATCGACCCAGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCGCTC‑C‑TACGCgagcgggttt > 1:1143866‑M2/1‑140 (MQ=255) tGGTGCTGGCGCCGGCTTCGTGCCAGCTGTTTACCGATTTGCTGACAGGGGCCGAGCCGATTATCGACCCGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCGCTC‑C‑TACGCgagcgggtttaccc < 1:1567284‑M2/150‑15 (MQ=255) tGGTGCTGGCGCCGGCTTCGTGCCAGCTGTTTACCGATTTGCTGACAGGGGCCGAGCCGATTATCGACCCGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAAC > 2:1806071‑M1/1‑124 (MQ=255) tGGTGCTGGCGCCGGCTTCGTGCCAGCTGTTTACCGATTTGCTGACAGGGGCCGAGCCGATTATCGACCCGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAAC < 1:1806071‑M1/124‑1 (MQ=255) gTGCTGGCGCCGGCTTCGTGCCAGCTGTTTACCGATTTGCTGACAGGGGCCGAGCCGATTATCGACCCGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCGCTC‑C‑TACGCgagcgggtttacccgc > 2:704239‑M2/1‑134 (MQ=255) ggCGCCGGCTTCGTGCCAGCTGTTTACCGATTTGCTGACAGGGGCCGAGCCGATTATCGACCCGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCGCTC‑C‑TACGCGAGCGGGTTTACCCGCGAAAg < 1:879552/150‑1 (MQ=255) ggCGCCGGCTTCGTGCCAGCTGTTTACCGATTTGCTGACAGGGGCCGAGCCGATTATCGACCCGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCGCTC‑C‑TACGCGAGCGGGTTTACCCGCGAAAg < 2:1567284/150‑1 (MQ=255) cgcCGGCTTCGTGCCAGCTGTTTACCGATTTGCTGACAGGGGCCGAGCCGATTATCGACCCGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCGCTC‑C‑TACGCGAGCGGGTTTACCCGCGAAAggg < 1:2369197/150‑1 (MQ=255) gcCGGCTTCGTGCCAGCTGTTTACCGATTTGCTGACAGGGGCCGAGCCGATTATCGACCCGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCGCTCgcgtaggagcggg > 1:377115‑M1/1‑120 (MQ=255) gcCGGCTTCGTGCCAGCTGTTTACCGATTTGCTGACAGGGGCCGAGCCGATTATCGACCCGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCGCTCgcgtaggagcggg < 2:377115‑M1/133‑14 (MQ=255) gCTTCGTGCCAGCTGTTTACCGATTTGCTGACAGGGGCCGAGCCGATTATCGACCCGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCGCTC‑C‑TACGCGAGCGGGTTTACCCGCGAAAGGGCCGCa > 1:1714767/1‑150 (MQ=255) gTGCCAGCTGTTTCCCGCTTTGCTGACAGGGGCCGAGCCGATTATCGACCCGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAAC > 2:2154058‑M1/1‑105 (MQ=255) gTGCCAGCTGTTTACCGATTTGCTGACAGGGGCCGAGCCGATTATCGACCCGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAAg < 1:2154058‑M1/105‑2 (MQ=255) tGCCAGCTGTTTACCGATTTGCTGACAGGGGCCGAGCCGATTATCGACCCGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCGCTCgcgtaggagcgggt > 1:1174623‑M1/1‑110 (MQ=255) tGCCAGCTGTTTACCGATTTGCTGACAGGGGCCGAGCCGATTATCGACCCGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCGCTCgcgtaggagcgggt < 2:1174623‑M1/124‑15 (MQ=255) gCCAGCTGTTTACCGATTTGCTGACAGGGGCCGAGCCGATTATCGACCCGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCGCTC‑C‑TACGCgagcgggttt > 1:153690‑M2/1‑115 (MQ=255) ccAGCTGTTTACCGATTTGCTGACAGGGGCCGAGCCGATTATCGACCCGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAACCCCGCTC‑C‑TACGCGAGCGGGTTTACCCGCGAAAGGGCCGCAGAAGCCaa < 2:1350745/150‑1 (MQ=255) aGCTGTTTACCGATTTGCTGACAGGGGCCGAGCCGATTATCGACCCGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCGCTC‑C‑TACGCGAGCGGGTTTACCCGCGAAAGGGCCGCAGAAGCCAATa > 2:930712/1‑150 (MQ=255) cTGACAGGGGCCGAGCCGATTATCGACCCGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCGCTC‑C‑TACGCGAGCGGGTTTACCCGCGAAAGGGCCGCAGAAGCCAATACAGATTTCAGCCAGTaa > 1:2178623/1‑150 (MQ=255) aCAGGGGCCGAGCCGATTATCGACCCGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCGCTC‑C‑TACGCGAGCGGGTTTACCCGCGAAAGGGCCGCAGAAGCCAATACAGATTTCAGCCAGTAATCg < 2:378897/150‑1 (MQ=255) aGGGGCCGAGCCGATTATCGACCCGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCGCTC‑C‑TAc > 2:1638291/1‑88 (MQ=255) aGGGGCCGAGCCGATTATCGACCCGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCGCTC‑C‑TAc < 1:1638291/88‑1 (MQ=255) ggggCCGAGCCGATTATCGACCCGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCGCTC‑C‑TACGCGAGCGGGTTTACCCGCGCACGGGCCGCAGAAGCCAATACAGATTTCAGTCAGTAATTGGTg > 1:1709597/1‑150 (MQ=255) gggCCGAGCCGATTATCGACCCGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCGCTC‑C‑TACGCGAGCGGGTTTACCCGCGAAAGGGCCGCAGAAGCCAATACAGATTTCAGCCAGTAATCGGTGc > 1:1487326/1‑150 (MQ=255) gccgagccgaTTATCGACCCGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCGCTC‑C‑TACGCGAGCGGGTTTACCCGCGAAAGGGcc < 2:854658/111‑1 (MQ=255) gccgagccgaTTATCGACCCGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCGCTC‑C‑TACGCGAGCGGGTTTACCCGCGAAAGGGCCGCAGAAGCCAATACAGATTTCAGCTAGTAATCGGTGCtt < 2:1420216/150‑1 (MQ=255) ccgagccgaTTATCGACCCGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCGCTCgcgtaggagcgggtttaccc > 2:1041219‑M1/1‑79 (MQ=255) ccgagccgaTTATCGACCCGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCGCTCgcgtaggagcgggtttaccc < 1:1041219‑M1/99‑21 (MQ=255) ccgaTTATCGACCCGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCGCTC‑C‑TACGCGAGCGGGTTTACCCGCGAAAGGGCCGCAGAAGCCAATACAGATTTCAGCCAGTAATCGGTGCTTGCAGGt < 1:2120023/150‑1 (MQ=255) cgaTTATCGACCCGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCGCTC‑C‑TACGCGAGCGGGTTTACCCGCGAAAGGGCCGCAGAAGCCAATACAGATTTCAGCCAGTAATCGGTGCTTGCAGGTg > 1:1113808/1‑150 (MQ=255) gaTTATCGACCCGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCGCTC‑C‑TACGCGAGCGGGTTTACCCGCGAAAGGGCCGCAGAAGCCAATACAGATTTCAGCCAGTAATCGGTGCTTGCAGGt > 1:1845327/1‑148 (MQ=255) ggactgggCGCGGTATGCGCCAGAAGGGCGTTTGGGCTGACGACCTCTTCGCGGGTACACCCGCTC‑C‑TACGCGAGCGGGTTTACCCGCGAAAGGGCCGCAGAAGCCAATACAGATTTCAGCCATTAATCGGTGCTTGCAGGTGCCGGCTc < 2:780011/144‑1 (MQ=255) gACCCGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCGCTC‑C‑TACGCgagcgggt > 2:35441‑M2/1‑71 (MQ=255) gACCCGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCGCTA‑C‑TACGCgagcgggt < 1:35441‑M2/79‑9 (MQ=255) aCCCGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCGCTC‑C‑TACGCGAGCGGGTTTACCCGCGAAAGGGCCGCAGAAGCCAATACAGATTTCAGCCAGTAATCGGTGc > 1:603025/1‑132 (MQ=255) ccGGCGCTGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCGCTC‑C‑TACGCGAGCGGGTTTACCCGCGAAAGGGc < 2:2311373/92‑1 (MQ=255) ccGGCGCTGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCGCTC‑C‑TACGCGAGCGGGTTTACCCGCGAAAGGGc > 1:2311373/1‑92 (MQ=255) ccGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCGCTC‑C‑TACGCGAGCGGGTTTACCCGCGAAAGGGCCGCAGAAGCCAATACAGATTTCAg > 2:1598489/1‑116 (MQ=255) ccGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCGCTC‑C‑TACGCGAGCGGGTTTACCCGCGAAAGGGCCGCAGAAGCCAATACAGATTTCAg < 1:1598489/116‑1 (MQ=255) ggCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCGCTC‑C‑TACGCGAGCGGGTTTACCCGCGAAAGGGCCGCAGAAGCCAATACAGATTTCAGCCAGTAATCGGTGCTTGCAGGTGCCGGCTCGGATaa > 1:648359/1‑150 (MQ=255) gTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCGCTC‑C‑TACGCGAGCGGGTTTACCCGCGAAAGGGCCg < 2:1280598/86‑1 (MQ=255) gTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCGCTC‑C‑TACGCGAGCGGGTTTACCCGCGAAAGGGCCg > 1:1280598/1‑86 (MQ=255) tATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCGCTCgcgtaggagcggg > 2:1613029‑M1/1‑53 (MQ=255) tATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCGCTC‑C‑TACGCGAGCGGGTTTACCCGCGAAAGGGCCGCAGAAGCCAATACAGATTTCAGCCAGTAATCGGTGCTTGCAGGTGCCGGCTCGGATAATgctgct < 2:49815/150‑1 (MQ=255) tGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCGCTC‑C‑TACGCGAGCGGGTTTACCCGCGAAAGGGCCGCAGAAGCCAATACAGATTTCAGCCAGTAATCGGTGCTTGCAGGTGCCGGCTCGGATAATGCTGCTCa > 1:169132/1‑150 (MQ=255) gcCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCGCTT‑C‑TACGCGAGCGGGTTTACCCGCGAAAGGGCCGCAGAAGCCAATACAGATTTCAGCCAGTAATCGGTGCTTGCAGGTGCCGGCTCGGATAATGCTGCTCATa < 1:1069639/149‑1 (MQ=255) gcCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCGCTC‑C‑TACGCGAGCGGGTTTACCCGCGAAAGGGCCGCAGAAGCCAATACAGATTTCAGCCAGTAATCGGTGCTTGCAGGTGCCGGCTCGGATAATGCTGCTCATa > 2:1069639/1‑149 (MQ=255) ccAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCGCTCgcgtaggagcgggtt < 2:1505115‑M1/62‑16 (MQ=255) ccAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCGCTCgcgtaggagcgggtt > 1:1505115‑M1/1‑47 (MQ=255) aggggCTTTGGGGCTGAGGCCCTTTTCGCGGCTAAGCCCCCTC‑G‑CACGCGAGCGGTTTCCCCCGCGAAAGGGCCGCAGAAGCCAATACAGATTTCAGCCAGTAATCGGTGCTTGCAGGTGCCGGCTCGGATAATGCTGCTCATACACCtt < 2:1709597/148‑1 (MQ=255) aGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCGCTC‑C‑TACGCGAGCGGGTTTACCCGCGAAAGGGCCGCAGAAGCCAATACAGATTTCAGCCAGTAATCGGTGCTTGCAGGTGCCGGCTCGGATAATGCTGCTCATACACCTTg < 2:2015005/150‑1 (MQ=255) gCGTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCGCTCgcgtaggagcgg < 2:1115572‑M1/51‑13 (MQ=255) gCGTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCGCTCgcgtaggagcgg > 1:1115572‑M1/1‑39 (MQ=255) gTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCGCTC‑C‑TACGCGAGCGGGTTTACCCGCGAAAGGGCCGCAGAAGCCAATa < 1:1848440/81‑1 (MQ=255) gTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCGCTC‑C‑TACGCGAGCGGGTTTACCCGCGAAAGGGCCGCAGAAGCCAATa > 2:1848440/1‑81 (MQ=255) gACCTCTTCGCGTGTAAACCCGCTC‑C‑TACGCGAGCGGGTTTACCCGCGAAAGGGCCGCAGAAGCCAATACAGATTTCAGCCAGTAATCGGTGCTTGCAGGTGCCGGCTCGGATAATGCTGCTCATa < 2:1721433/126‑1 (MQ=255) gACCTCTTCGCGGGTACACCCGCTC‑C‑TACGCGAGCGGGTTTACCCGCGAAAGGGCCGCAGAAGCCAATACAGATTTCAGCCAGTAATCGGTGCTTGCAGGTGCCGGCTCGGATAATGCTGCTCATACACCTTGCACACCCGCAGCACTTg < 1:1112938/150‑1 (MQ=255) gACCTCTTCGCGGGTAAACCCGCTC‑C‑TACGCGAGCGGGTTTACCCGCGAAAGGGCCGCAGAAGCCAATACAGATTTCAGCCAGTAATCGGTGCTTGCAGGTGCCGGCTCGGATAATGCTGCTCATa > 1:1721433/1‑126 (MQ=255) aCCTCTTCGCGGGTAAACCCGCTC‑C‑TACGCGAGCGGGTTTACCCGCGAAAGGGCCGCAGAAGCCAATACAGATTTCAGCCAGTAATCGGTGCTTGCAGGTGCCGGCTCGGATAATGCTGCTCATACACCTTGCACACCCGCAGCACTTGc < 2:648359/150‑1 (MQ=255) ccTCTTCGCGGGTGAACCCGCTC‑Ctacgggcgggtttacccgcgaagaggccagcacaggcgataaacatcaatgcccaggacgcgccggtacctgcaacaaaacccgcaagccgtcactacggct > 2:1926001‑M1/1‑24 (MQ=255) ccTCTTCGCGGGTGAACCCGCTC‑Ctacgggcgggtttacccgcgaagaggccagcacaggcgataaacatcaatgcccaggacgcgccggtacctgcaacaaaacccgcaagccgtcactacggct < 1:1926001‑M1/126‑103 (MQ=255) ccTCTTCGCGGGAAAACCCGCCA‑A‑TACGCGAGCGGGTTTACCCGCGAAAGGGCCGCAGAAGCCAATACAGATTTCAGCCAGTAATCGGTGCTTGCAGGTGCCGGCTCGGATAATGCTGCTCATACACCTTGCACACCCGCAGCACTTGCt > 2:1419086/1‑150 (MQ=255) ctctTCGCGGGTAAACCCGCTC‑C‑TACGCGAGCGGGTTTACCCGCGAAAGGGCCGCAGAAGCCAATACAGATTTCAGCCAGTAATCGGTGCTTGCAGGTGCCGGCTCGGATAATGCTGCTCATACACCTTGCACACCCGCAGCACTTGCtc > 1:1942843/1‑150 (MQ=255) cctttCGCGGGTAAACCCGCTCGC‑GTAG‑GAGCGGGTTTACCCGCGAAAGGGCCGCAGAAGCCAATACAGATTTCAGCCAGTAATCGGTGCTTGCAGGTGCCGGCTCGGa < 1:325447/106‑1 (MQ=21) tttCGCGGGTAAACCCGCTCGCGTA‑G‑GAGCGGGTTTACCCGCGAAAGGGCCGCAGGAGCCAATACAGATTTCAGCCAGTAATCGGTGCTTGCAGGTGCCGGCTCg < 2:428099/104‑1 (MQ=21) tttCGCGGGTAAACCCGCTC‑G‑CGTAGGAGCGGGTTTACCCGCGAAAGGGCCGCAGGAGCCAATACAGATTTCAGCCAGTAATCGGTGCTTGCAGGTGCCGGCTCg > 1:428099/2‑105 (MQ=21) tttCGCGGGTAAACCCGCTC‑G‑CGTAGGAGCGGGTTTACCCGCGAAAGGGCCGCAGAAGCCAATACAGATTTCAGCCAGTAATCGGTGCTTGCAGGTGCCGGCTCGGATAATGCTGCTGATACACCTTGCACAGCCGCAGCACTTGCtcat > 1:311376/2‑150 (MQ=38) ctTCGCGGGTAAACCCGCTC‑C‑TACGCGAGCGGGTTTACCCGCGAAAGGGCCGCAGAAGCCAATACAGATTTCAGCCAGTAATCGGTGCTTGCAGGTGCCGGCTCGGATAATGCCGCTCATACCCCTTGCGCACCCGCAGCACTTGCtcat > 2:559649/1‑150 (MQ=255) ttCGCGGGTGAACCCGCTC‑Ctacgggcgggtttacccgcgaagaggccagcacaggcgataaacatcaatgcccaggacgcgccggtacctgcaacaaaacccgcaagccgtcactacggctgtcaaagcgcaggctaccggcacaccgc > 2:1407229‑M1/1‑20 (MQ=255) ttCGCGGGTAAACCCGCTC‑C‑TACGCGAGCGGGTTTACCCGCGAAAGGGCCGCAGAAGCCAATACAGATTTCAGCCAGTAATCGGTGCTTGCAGGTGACGGCTCGGATAATGCTGCTCATACACCTTGCACACCCGCAGCACTTGCtcatc < 1:1267407/150‑1 (MQ=255) tCGCGGGTAAACCCGCTC‑C‑TACGCGAGCGGGTTTACCCGCGAAAGGGCCGCAGAAGCCAATACAGATTTCAGCCAGTAATCGGTGCTTGCAGGTGCCGGCTCGGATAATGCTGCTCATTCGCCTTGCACTCCCGGTGCACTTGCtcatca < 2:1487326/150‑1 (MQ=255) gcgGGTAAACCCGCTCgcgtaggagcgggtttacccgcgaagaggtcctcagcccaaacgcccttctggcgcatacggcgccgggtcgataatcggctcggcccctgtcagcaaatcggtaaacagctggcacgaagccggcgccagcac > 2:704239‑M1/1‑16 (MQ=255) cgGGTGAACCCGCTC‑Ctacgggcgggtttacccgcgaagaggccagcacaggcgataaacatcaatgcccaggacgcgc < 2:875138‑M1/79‑64 (MQ=255) cgGGTGAACCCGCTC‑Ctacgggcgggtttacccgcgaagaggccagcacaggcgataaacatcaatgcccaggacgcgc > 1:875138‑M1/1‑16 (MQ=255) gggTGAACCCGCTC‑Ctacgggcgggtttacccgcgaagaggccagcacaggcgataaacatcaatgcccaggacgcgccggtacctgcaacaaaacccgcaagccgtcactacggctgtcaaagcgcaggctaccggcacaccgctgcac > 2:1798969‑M1/1‑15 (MQ=255) gggTAAACCCGCTCgcgtaggagcgggtttacccgcgaagaggtcctcagcccaaacgcccttctggcgcatacggcgccgggtcgataatcggctcggcccctgtcagcaaatcggtaaacagctggcacgaagccggcgccagcacca < 1:1567284‑M1/150‑137 (MQ=255) gggTAAACCCGCTC‑C‑TACGCgagcgggtttacccgcgaagaggtcctcagcccaaacgcccttctggcgcatacggcgccgggtcgataatcggctcgg < 1:1041219‑M2/99‑80 (MQ=255) gggTAAACCCGCTC‑C‑TACGCgagcgggtttacccgcgaagaggtcctcagcccaaacgcccttctggcgcatacggcgccgggtcgataatcggctcgg > 2:1041219‑M2/1‑20 (MQ=255) ggTGAACCCGCTC‑Ctacgggcgggtttacccgcgaagaggccagcacaggcgataaacatcaatgcccaggacgcgccggtacctgcaacaaaacccgcaagccgtcactacggctgtcaaagcgcaggctaccggcacaccgctgc > 1:1113687‑M1/1‑14 (MQ=255) ggTGAACCCGCTC‑Ctacgggcgggtttacccgcgaagaggccagcacaggcgataaacatcaatgcccaggacgcgccggtacctgcaacaaaacccgcaagccgtcactacggctgtcaaagcgcaggctaccggcacaccgctgc < 2:1113687‑M1/147‑134 (MQ=255) ggTGAACCCGCTC‑Ctacgggcgggtttacccgcgaagaggccagcacaggcgataaacatcaatgcccaggacgcgccggtacctgcaacaaaacccgcaagccgtcactacggctgtcaaagcgcaggctaccggca < 2:505906‑M1/138‑125 (MQ=255) ggTGAACCCGCTC‑Ctacgggcgggtttacccgcgaagaggccagcacaggcgataaacatcaatgcccaggacgcgccggtacctgcaacaaaacccgcaagccgtcactacggctgtcaaagcgcaggctaccggca > 1:505906‑M1/1‑14 (MQ=255) aaaCCCGCTCgcgtaggagcgggtttacccgcgaagaggtcctcagcccaaacgcccttctggcgcatacggcgctgggtcgataatcggctcggcccctgtcagcaaatcggtaaacagctggcacgaagccggcgccagcaccagccc > 1:1143866‑M1/1‑10 (MQ=255) aaaCCCGCTCgcgtaggagcgggtttacccgcgaagaggtcctcagcccaaacgcccttctggcgcatacggcgccgggtcgataatcggctcggcccctgtcagcaaatcggtaaacagctggc > 1:153690‑M1/1‑10 (MQ=255) aaaCCCGCTCgcgtaggagcgggtttacccgcgaagaggtcctcagcccaaacgcccttctggcgcatacggcgccgggtcgataatcggctcggcccctgtcagcaaatcggtaaacagctggc < 2:153690‑M1/125‑116 (MQ=255) | GAACTGCGGGCATTATCGCAATGGGCTGGTGCTGGCGCCGGCTTCGTGCCAGCTGTTTACCGATTTGCTGACAGGGGCCGAGCCGATTATCGACCCGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCGCTC‑C‑TACGCGAGCGGGTTTACCCGCGAAAGGGCCGCAGAAGCCAATACAGATTTCAGCCAGTAATCGGTGCTTGCAGGTGCCGGCTCGGATAATGCTGCTCATACACCTTGCACACCCGCAGCACTTGCTCATCAGCAAAG > NC_002947/718304‑718597 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |