| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 735,621 | C→T | 5.9% | intergenic (‑44/+89) | PP_0627 ← / ← PP_0628 | hypothetical protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 735,621 | 0 | C | T | 5.9% | 300.7 / 6.8 | 101 | intergenic (‑44/+89) | PP_0627/PP_0628 | hypothetical protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base C (44/51); new base T (3/3); total (47/54) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.87e-01 | |||||||||||
Only 100 of 101 total aligned reads displayed.
AAGGAGCAGCCACGGCCGGAAGGGCCTGCGCTCGACTTGGTGCTGGGGGGCTCGCAGATACTCATCGACACGACGCTGATCTTCCGGGTTCAGGCGACTGGTCATGGTGGGCCT‑CGTCAGGTAGACGTTTGTGACTGCGCAAACGCTACAGCGTTCGCGCAGGCGCTTGAAACAAATGATAATGCTTTCTATCCCTGGCGCCGAGTGTACGCCATCGCAAACAGTCGCTGCACTGGATCAAAGACTGATGCCTACGTCGAAGACGATGCTGCGGCCCAGGTTGCCGCGCAGGAAAT > NC_002947/735473‑735768 | aaGGAGCAGCCACGGCCGGAAGGGCCTGCGCTCGACTTGGTGCTGGGGGGCTCGCAGATACTCATCGACACGACGCTGATCTTCCGGGTTCAGGCGACTGGTCATGGTGGGCCT‑CGTCAGGTAGACGTTTGTGACTGCGCAAACGCTACa < 1:1920819/150‑1 (MQ=255)aaGGAGCAGCCACGGCCGGAAGGGCCTGCGCCCGACTTGGTGCTGGGGGGCTCGCAGATACTCATCGACACGACGCTGATCTTCCGGGTTCAGGCGACTGGTCATGGTGGGCCT‑CGTCAGGTAGACGTTTGTGACTGCGCAAACGCTACa < 1:1005187/150‑1 (MQ=255) ggAGCAGCCACGGCCGGAAGGGCCTGCGCTCGACTTGGTGCTGGGGGGCTCGCAGATACTCATCGACACGACGCTGATCTTCCGGGTTCAGGCGACTGGTCATGGTGGGCCT‑CGTCAGGTAGACGTTTGTGACTGCGCAAACGCTACAGc > 2:1458944/1‑150 (MQ=255) gcagcCACGGCCGGAAGGGCCTGCGCTCGACTTGGTGCTGGGGGGCTCGCAGATACTCATCGACACGACGCTGATCTTCCGGGTTCAGGCGACTGGTCATGGTGGGCCT‑CGTCAGGTAGACGTTTGTGACTGCGCAAACGCTACAGCGtt < 2:453513/150‑1 (MQ=255) cagcCACGGCCGGAAGGGCCTGCGCTCGACTTGGTGCTGGGGGGCTCGCAGATACTCATCGACACGACGCTGATCTTCCGGGTTCAGGCGACTGGTCATGGTGGGCCT‑CGTCAGGTAGACGTTTGTGACTGCGCAAACGCTACAGCGTTc < 2:219525/150‑1 (MQ=255) cagcCACGGCCGGAAGGGCCTGCGCTCGACTTGGTGCTGGGGGGCTCGCAGATACTCATCGACACGACGCTGATCTTCCGGGTTCAGGCGACTGGTCATGGTGGGCCT‑CGTCAGGTAGACGTTTGTGACTGCGCAAACGCTACAGCGTTc < 1:1292987/150‑1 (MQ=255) ccACGGCCGGAAGGGCCTGCGCTCGACTTGGTGCTGGGGGGCTCGCAGATACTCATCGACACGACGCTGATCTTCCGGGTTCAGGCGACTGGTCATGGTGGGCCT‑CGTCAGGTAGACGTTTGTGACTGCGCAAACGCTACAGCGTTcgcg < 1:1080363/150‑1 (MQ=255) aCGGCCGGAAGGGCCTGCGCTCGACTTGGTGCTGGGGGGCTCGCAGATACTCATCGACACGACGCTGATCTTCCGGGTTCAGGCGACTGGTCATGGTGGGCCT‑CGTCAGGTAGACGTTTGTGACTGCGCGAACGCTGTAGCGTTtgcgaa < 1:1667470/150‑3 (MQ=255) aCGGCCGGAAGGGCCTGCGCTCGACTTGGTGCTGGGGGGCTCGCAGATACTCATCGACACGACGCTGATCTTCCGGGTTCAGGCGACTGGTCATGGTGGGCCT‑CGTCAGGTAGACGTTTGTGACTGCGCAAACGCTACAGCGTTCGCGCa < 1:1491571/150‑1 (MQ=255) aCGGCCGGAAGGGCCTGCGCTCGACTTGGTGCTGGGGGGCTCGCAGATACTCATCGACACGACGCTGATCTTCCGGGTTCAGGCGACTGGTCATGGTGGGCCT‑CGTCAGGTAGACGTTTGTGACTGCGCAAACGCTACAGCGTTCGCGCa > 2:237508/1‑150 (MQ=255) ccGGAAGGGCCTGCGCTCGACTTGGTGCTGGGGGGCTCGCAGATACTCATCGACACGACGCTGATCTTCCGGGTTCAGGCGACTGGTCATGGTGGGCCT‑CGTCAGGTAGACGTTTGTGACTGCGCAAACGCTACAGCGTTCGCGCAGgcg > 1:1733002/1‑150 (MQ=255) cGGAAGGGCCTGCGCTCGACTTGGTGCTGGGGGGCTCGCAGATACTCATCGACACGACGCTGATCTTCCGGGTTCAGGCGACTGGTCATGGTGGGCCT‑CGTCAGGTAGACGTTTGTGACTGCGCAAACGCTACAGCGTTCGCGCAGgcgc < 1:609145/150‑1 (MQ=255) gAAGGGCCTGCGCTCGACTTGGTGCTGGGGGGCTCGCAGATACTCATCGACACGACGCTGATCTTCCGGGTTCAGGCGACCGGTCATGGTGGGCGT‑CGTCAGGTAGACGTTTGTGACTGCGCAAACGCTACAGCGTTCGCGCAGGCGCtt < 2:413266/150‑1 (MQ=255) ccTGCGCTCGACTTGGTGCTGGGGGGCTCGCAGATACTCATCGACACGACGCTGATCTTCCGGGTTCAGGCGACTGGTCATGGTGGGCCT‑CGTCAGGTAGACGTTTGTGACTGCGCAAACGCTACAGCGTTCGCGCAGGCGCTTGAAACa > 1:1886894/1‑150 (MQ=255) tGCGCTCGACTTGGTGCTGGGGGGCTCGCAGCTACTCATCGACAGGACGCTAAGCGTTCGGGTTCAGGCCACTGGACATAACGGGTCT‑CGGCATGTAGACGTTTGTGACTGCGCAAACGCTACAGCGTTCGCGCAGGCACTTGAAACaaa > 1:550082/1‑150 (MQ=255) tGCGCTCGACTTGGTGCTGGGGGGCTCGCAGATACTCATCGACACGACGCTGATCTTCCGGGTTCAGGCGACTGGTCATGGTGGGCCT‑CGTCAGGTAGACGTTTGTGACTGCGCAAACGCTACAGCGTTCGCGCAGGCGCtt > 1:1339372/1‑142 (MQ=255) tGCGCTCGACTTGGTGCTGGGGGGCTCGCAGATACTCATCGACACGACGCTGATCTTCCGGGTTCAGGCGACTGGTCATGGTGGGCCT‑CGTCAGGTAGACGTTTGTGACTGCGCAAACGCTACAGCGTTCGCGCAGGCGCtt < 2:1339372/142‑1 (MQ=255) tGCGCTCGACTTGGTGCTGGGGGGCTCGCAGATACTCATCGACACGACGCTGATCTTCCGGGTTCAGGCGACTGGTCATGGTGGGCCT‑CGTCAGGTAGACGTTTGTGACTGCGCAAACGCTACAGCGTTCGCGCAGGCGCTTGAAACaaa > 1:1773468/1‑150 (MQ=255) tGCGCTCGACTTGGTGCTGGGGGGCTCGCAGATACTCATCGACACGACGCTGATCTTCCGGGTTCAGGCGACTGGTCATGGTGGGCCT‑CGTCAGGTAGACGTTTGTGACTGCGCAAACGCTACAGCGTTCGCGCAGGCGCTTGAAACaaa < 1:1865015/150‑1 (MQ=255) tGCGCTCGACTTGGTGCTGGGGGGCTCGCAGATACTCATCGACACGACGCTGATCTTCCCGGTTCGCTTTAGCACACATGGTGGGCCT‑CGTCAGGTAGACGTTTGTGACTGCGCAAACGCTACAGCGTTCGCGCAGGCGCTTGAAACaaa < 1:1622111/150‑1 (MQ=255) cTCGACTTGGTGCTGGGGGGCTCGCAGATACTCATCGACACGACGCTGATCTTCCGGGTTCAGGCGACTGGTCATGGTGGGCCT‑CGTCAGGTAGACGTTTGTGACTGCGCAAACGCTACAGCGTTCGCGCAGGCGCTTGAAACAAATGAt > 1:1596869/1‑150 (MQ=255) cTCGACTTGGTGCTGGGGGGCTCGCAGATACTCATCGACACGACGCTGATCTTCCGGGTTCAGGCGACTGGTCATGGTGGGCCT‑CGTCAGGTAGACGTTTGTGACTGCGCAAACGCTACAGCGTTCGCGCAGGCGCTTGAAACAAATGAt < 2:418783/150‑1 (MQ=255) tCGACTTGGTGCTGGGGGGCTCGCAGATACTCATCGACACGACGCTGATCTTCCGGGTTCAGGCGACTGGTCATGGTGGGCCT‑CGTCAGGTAGACGTTTGTGCCTGCGCGAACGCTGTAGCGttt < 1:2334932/125‑2 (MQ=255) tCGACTTGGTGCTGGGGGGCTCGCAGATACTCATCGACACGACGCTGATCTTCCGGGTTCAGGCGACTGGTCATGGTGGGCCT‑CGTCAGGTAGACGTTTGTGCCTGCGCGAACGCTGTAGCGttt > 2:2334932/1‑124 (MQ=255) tCGACTTGGTGCTGGGGGGCTCGCAGATACTCATCGACACGACGCTGATCTTCCGGGTTCAGGCGACTGGTCATGGTGGGCCT‑CGTCAGGTAGACGTTTGTGACTGCGCAAACGCTACAGCGTTCGCGCAGGCGCTTGAAACAAATGATa > 1:1256138/1‑150 (MQ=255) cGACTTGGTGCTGGGGGGCTCGCAGATACTCATCGACACGACGCTGATCTTCCGGGTTCAGGCGACTGGTCATGGTGGGCCT‑CGTCAGGTAGACGTTTGTGACTGCGCAAACGCTACAGCGTTCGCGCAGGCGCTTGAAACAAATGATaa < 2:188958/150‑1 (MQ=255) gACTTGGTGCTGGGGGGCTCGCAGATACTCATCGACACGACGCTGATCTTCCGGGTTCAGGCGACTGGTCATGGTGGGCCT‑CGTCAGGTAGACGATTGTGACTCAGCCCACCAGACATCGTTTGCGGAGGCGCTTGAAACAAATGATAAt > 1:1738643/1‑150 (MQ=255) cTTGGTGCTGGGGGGCTCGCAGATACTCATCGACACGACGCTGATCTTCCGGGTTCAGGCGACTGGTCATGGTGGGCCT‑CGTCAGGTAGACGTTTGTGACTGCGCAAACGCTACAGCGTTCGCGCAGGCGCTTGAAACAAATGATAATGc > 1:620545/1‑150 (MQ=255) ttGGTGCTGGGGGGCTCGCAGATACTCATCGACACGACGCTGATCTTCCGGGTTCAGGCGACTGGTCATGGTGGGCCT‑CGTCAGGTAGACGTTTGTGACTGCGCAAACGCTACAGCGTTCGCGCAGGCGCTTGAAACAAATGATAATGCt < 2:1733002/150‑1 (MQ=255) ggTGCTGGGGGGCTCGCAGATACTCATCGACACGACGCTGATCTTCCGGGTTCAGGCGACTGGTCATGGTGGGCCT‑CGCCAGGTAGACGTTTGTGACTGCGCAAACGCTACAGCGTTCGCGCAGGCGCTTGAAACAAATGATAATGCttt < 1:1303013/150‑1 (MQ=255) gTGCTGGGGGGCTCGCAGATACTCATCGACACGACGCTGATCTTCCGGGTTCAGGCGACTGGTCATGGTGGGCCT‑CGTCAGGTAGACGTTTGTGACTGCGCAAACGCTACAGCGTTCGCGCAGGCGCTTGAAACAAATGATAATGCTTTc < 1:1920237/150‑1 (MQ=255) tGGGGGGCTCGCAGATACTCATCGACACGACGCTGATCTTCCGGGTTCAGGCGACTGGTCATGGTGGGCCT‑CGTCAGGTAGACGTTTGTGACTGCGCAAACGCTACAGCGTTCGCGCAGGCGCTTGAAACAAATGATAATGCTTTCTATc > 2:2137579/1‑150 (MQ=255) ggggggCTCGCAGATACTCATCGACACGACGCTGATCTTCCGGGTTCAGGCGCCTGG‑AATCGCGGTTCTGCCTCAGGTAGACGTTTGTGACTGCGCAACCGCTCCAGCGTTCGCGCAGGCGCTTGAAACAAATGATAATGCTTTCTATcc < 1:1150432/150‑1 (MQ=255) ggggggCTCGCAGATACTCATCGACACGACGCTGATCTTCCGGGTTCAGGCGACTGGTCATGGTGGGCCT‑CGTCAGGTAGACGTTTGTGACTGCGCAAACGCTACAGCGTTCGCGCAGGCGCTTGAAACAAATGATAATGCTTTCTATcc < 2:1256138/150‑1 (MQ=255) ggggggCTCGCAGATACTCATCGACACGACGCTGATCTTCCGGGTTCAGGCGACTGGTCATGGTGGGCCT‑CGTCAGGTAGACGTTTGTGACTGCGCAAACGCTACAGCGTTCGCGCAGGCGCTTGAAACAAATGATAATGCTTTCTATcc < 2:1886894/150‑1 (MQ=255) gCAGATACTCATCGACACGACGCTGATCTTCCGGGTTCAGGCGACTGGTCATGGTGGGCCT‑CGTCAGGTAGACGTTTGTGACTGCGCAAACGCTACAGCGTTCGCGCAGGCGCTTGAAACAAATGATAATGCTTTCTATCCCTGGCGCCg > 1:187672/1‑150 (MQ=255) cAGATACTCATCGACACGACGCTGATCTTCCGGGTTCAGGCGACTGGTCATGGTGCGCCT‑CGTCAGGTAGACGTTTGTGACTGCGCAAACGCTACAGCGTTCGCGCAGGCGCTTGAAACAAATGATAATGCTTTCTATCCCTGGCGCCGa < 1:1433553/150‑1 (MQ=255) gATACTCATCGACACGACGCTGATCTTCCGGGTTCAGGCGACTGGTCATGGTGGGCCT‑CGTCAGGTAGACGTTTGTGACTGCGCAAACGCTACAGCGTTCGCGCAGGCGCTTGAAACAAATGATAATGCTTTCTATCCCTGGCGCCGAgt < 2:1773468/150‑1 (MQ=255) aCTCATCGACACGACGCTGATCTTCCGGGTTCAGGCGACTGGTCATGGTGGGCCT‑CGTCAGGTAGACGTTTGTGACTGCGCAAACGCTACAGCGTTCGCGCAGGCGCTTGAAACAAATGATAATGCTTTCTATCCCTGGCGCCGAGTGTa < 1:237508/150‑1 (MQ=255) cTCATCGACACGACGCTGATCTTCCGGGTTCAGGCGACTGGTCATGGTGGGCCT‑CGTCAGGTAGACGTTGGTGACTGCGCAAACGCTACAGCGTTCGCGCAGGCGCTTGAAACAAATGATAATGCTTTCTATCCCTGGCGCCGAGTGTAc > 2:727055/1‑150 (MQ=255) ttccctacacGACGCTGATCTTCCGGGTTCAGGCGACTGGTCATGGTGGGCCT‑CGTCAGGTAGACGTTTGTGACTGCGCAAACGCTACAGCGTTCGCGCAGGCGCTTGAAACAAATGATAATGCTTTCTATCCCTGGCTCCGAGTGTACg < 2:1954208/144‑1 (MQ=255) tCATCGACACGACGCTGCTCTGTCGGGTTCACGCGACTGGTCATGGTGGGCCT‑TGTCAGGTAGACGTTTGTGGCTGTGCAAACGCTACAGCGTTCGCGCAGGCGCTTGAAACAAATGATAATGCTTTCTATCCCTGGCGCCGAGTGTACg < 1:1931735/150‑1 (MQ=255) tCATCGACACGACGCTGATCTTCCGGGTTCAGGCGACTGGTCATGGTGGGCCT‑CGTCAGGTAGACGTTTGTGACTGCGCAAACGCTACAGCGTTc < 2:1044394/95‑1 (MQ=255) tCATCGACACGACGCTGATCTTCCGGGTTCAGGCGACTGGTCATGGTGGGCCT‑CGTCAGGTAGACGTTTGTGACTGCGCAAACGCTACAGCGTTc > 1:1044394/1‑95 (MQ=255) tCGACACGACGCTGATCTTCCGGGTTCAGGCGACTGGTCATGGTGGGCCT‑CGTCAGGTAGACGTTTGTGACTGCGCAAACGCTACAGCGTTCGCGCAGGCGCTTGAAACAAATGATAATGCTTTCTATCCCTGGCGCCGAGTGTAc < 2:547889/146‑1 (MQ=255) tCGACACGACGCTGATCTTCCGGGTTCAGGCGACTGGTCATGGTGGGCCT‑CGTCAGGTAGACGTTTGTGACTGCGCAAACGCTACAGCGTTCGCGCAGGCGCTTGAAACAAATGATAATGCTTTCTATCCCTGGCGCCGAGTGTAc > 1:547889/1‑146 (MQ=255) cGACACGACGCTGATCTTCCGGGTTCAGGCGACTGGTCATGGTGGGCCT‑CGTCAGGTAGACGTTTGTGACTGCGCAAACGCTACAGCGTTCGCGCAGGCGCTTGAAACAAATGATAATGCTTTCTATCCCTGGCGCCGAGTGTACGCCAt > 2:1448546/1‑150 (MQ=255) gACACGACGCTGATCTTCCGGGTTCAGGCGACTGGTCATGGTGGGCCT‑CGTCAGGTAGACGTTTGTGACTGCGCAAACGCTACAGCGTTCGCGCAGGCGCTTGAAACAAATGATAATGCTTTCTATCCCTGGCGCCGAGTGTACGCCATc < 1:929784/150‑1 (MQ=255) acacGACGCTGATCTTCCGGGTTCAGGCGACTGGTCATGGTGGGCCT‑CGTCAGGTAGACGTTTGTGACTGCGCAAACGCTACAGCGTTCGCGCAGGCGCTTGAAACAAATGa < 1:830991/112‑1 (MQ=255) cTGATCTTCCGGGTTCAGTCGACTGGTCATGGTGGGCCT‑CGTCAGGTAGACGTTTGTGACTGCGCAAACGCTACAGCGTTCGCGCAGGCGCTTGAAACAAATGATAATGCTTTCTATCCCTGGCGCCGAGTGTACGCCATCGCAAACAGt < 2:1641908/150‑1 (MQ=255) tGATCTTCCGGGTTCAGGCGACTGGTCATGGTGGGCCT‑CGTCAGGTAGACGTTTGTGACTGCGCAAACGCTACAGCGTTCGCGCAGGCGCTTGAAACAAATGATAATGCTTTCTATCCCTGGCGCCGAGCGTACGCCATCGCAAACATTc > 2:2191211/1‑150 (MQ=255) ttCCGGGTTCAGGCGACTGGTCATGGTGGGCCT‑CGTCAGGTAGACGTTTGTGACTGCGCAAACGCTACAGCGTTCGCGCAGGCGCTTGAAACAAATGATAATGCTTTCTATCCCTGGCGCCGAGTGTACGCCATCGCAAACAGTCGCTGc > 1:1175458/1‑150 (MQ=255) ccGGGTTCAGGCGACTGGTCATGGTGGGCCT‑CGTCAGGTAGACGTTTGTGACTGCGCAAACGCTACAGCGTTCGCGCAGGCGCTTGAAACAAATGATAATGCTTTCTATCCCTGGCGCCGAGTGTACGCCATCGCAAACAGTCGCTGCAc < 2:312538/150‑1 (MQ=255) ggCGACTGGTCATGGTGGGCCT‑CGTCAGGTAGACGTTTGTGACTGCGCAAACGCTACAGCGTTCGCGCAGGCGCTTGAAACAAATGATAATGCTTTCTATCCCTGGCGCCGAGTGTACGCCATCGCAAACAGTCGCTGCACTGGATCaaa < 2:1175458/150‑1 (MQ=255) ggCGACTGGTCATGGTGGGCCT‑CGTCAGGTAGACGTTTGTGACTGCGCAAACGCTACAGCGTTCGCGCAGGCGCTTGAAACAAATGATAATGCTTTCTATCCCTGGCGCCGAGTGTACGCCATCGCAAACAGTCGCTGCACTGGATCaaa < 1:1458944/150‑1 (MQ=255) gCGACTGGTCATGGTGGGCCT‑CGTCAGGTAGACGTTTGTGACTGCGCAAACGCTACa < 2:2153196/57‑1 (MQ=255) gCGACTGGTCATGGTGGGCCT‑CGTCAGGTAGACGTTTGTGACTGCGCAAACGCTACa > 1:2153196/1‑57 (MQ=255) gCGACTGGTCATGGTGGGCCT‑CGTCAGGTAGACGTTTGTGACTGCGCAAACGCTACAGCGTTCGCGCAGGCGCTTGAAACAAATGATAATGCTTTCTATCCCTGGCGCCGAGTGTACGCCATCGCAAACAGTCGCTGCACTGGATCAAAg < 1:1448546/150‑1 (MQ=255) cGACTGGTCATGGTGGGCCT‑CGTCAGGTAGACGTTTGTGACTGCGCAAACGCTACAGCGTTCGCGCAGGCGCTTGAAACAAATGATAATGCTTTCTATCCCTGGCGCCGAGTGTACGCCATCGCAAACAGTCGCTGCACTGGATCAAAGa < 2:187672/150‑1 (MQ=255) gACTGGTCATGGTGGGCCT‑CGTCAGGTAGACGTTTGTGACTGCGCAAACGCTACAGCGTTCGCGCAGGCGCTTGAAACAAATGATAATGCTTTCTATCGCTGGCGCCGAGTGTACGCCATCGCAAACAGTCGCTGCACTGGATCAAAGAc > 1:1420968/1‑150 (MQ=255) gTCATGGTGGGCCT‑CGTCAGGTAGACGTTTGTGACTGCGCAAACGCTACAGCGTTCGCGCAGGCGCTTGAAACAAAt < 1:286702/77‑1 (MQ=255) gTCATGGTGGGCCT‑CGTCAGGTAGACGTTTGTGACTGCGCAAACGCTACAGCGTTCGCGCAGGCGCTTGAAACAAAt > 2:286702/1‑77 (MQ=255) gTCATGGTGGGCCT‑CGTCAGGTAGACGTTTGTGACTGCGCAAACGCTACAGCGTTCGCGCAGGCGCTTGAAACAAATGATAATGCTTTCTATCCCTGGCGCCGAGTGTACGCCATCGCAAACAGTCGCTGCACTGGATCAAAGACTGATg > 2:257254/1‑150 (MQ=255) tCATGGTGGGCCT‑CGTCAGGTAGACGTTTGTGACTGCGCAAACGCTACAGCGTTCGCGCAGGCGCTTGAAACAAATGATAATGCTTTCTATCCCTGGCGCCGAGTGTACGCCATCGCAAACAGTCGCTGCACTGGATCAAAGACTGATGc > 2:1714226/1‑150 (MQ=255) aTGGTGGGCCT‑CGTCAGGTAGACGTTTGTGACTGCGCAAACGCTACAGCGTTCGCGCAGGCGCTTGAAACAAATGATAATGCTTTCTATCCCTGGCGCCGAGTGTACGCCATCGCAAACAGTCGCTGCACTGGATCAAAGACTGATGCCt > 1:195733/1‑150 (MQ=255) aTGGTGGGCCT‑CGTCAGGTAGACGTTTGTGACTGCGCAAACGCTACAGCGTTCGCGCAGGCGCTTGAAACAAATGATAATGCTTTCTATCCCTGGCGCCGAGTGTACGCCATCGCAAACAGTCGCTGCACTGGATCAAAGACTGATGCCt > 1:1387115/1‑150 (MQ=255) gggCGT‑CGTCAGGTAGACGTTTGTGACTGCGCAAACGCTACAGCGTTCGCGCAGGCGCTTGAAACAAATGAt < 2:1175804/72‑1 (MQ=255) gggCGT‑CGTCAGGTAGACGTTTGTGACTGCGCAAACGCTACAGCGTTCGCGCAGGCGCTTGAAACAAATGAt > 1:1175804/1‑72 (MQ=255) gggCCT‑CGTCAGGTAGACGTTGGTGACTGCGCAAACGCTACAGCGTTCGCGCAGGCGCTTGAAACAAATGATAATGCTTTCTATCCCTGGCGCCGAGTGTACGCCATCGCAAACAGTCGCTGCACTGGATCAAAGACTGATGCCTACGTc < 1:727055/150‑1 (MQ=255) ggCCT‑CGTCAGGTAGACGTTTGTGACTGCGCAAACGCTACAGCGTTCGCGCAGGCGCTTGAAACAAATGATAATGCTTTCTATCCCTGGCGCCGAg < 2:245421/96‑1 (MQ=255) ggCCT‑CGTCAGGTAGACGTTTGTGACTGCGCAAACGCTACAGCGTTCGCGCAGGCGCTTGAAACAAATGATAATGCTTTCTATCCCTGGCGCCGAg > 1:245421/1‑96 (MQ=255) ccT‑CGTCAGGTAGACGTTTGTGACTGCGCAAACGCTACAGCGTTCGCGCAGGCGCTTGAAACAAATGATAATGCTTTCTATCCCTGGCGCCGAGTGTACGCCATCGCAAACAGTCGCTGCACTGGATCAAAGACTGATGCCTACGTCGaa < 1:257254/150‑1 (MQ=255) gTAGACGTTTGTGACTGCGCAAACGCTACAGCGTTCGCGCAGGCGCTTGAAACAAATGATAATGCTTTCTATCCCTGGCGCCGAGTGTACGCCATCGCAAACAGTCGCTGCACTGGATCAAAGACTGATGCCTACGTCGAAGACGAtgct > 1:801628/1‑150 (MQ=255) tAGACGTTTGTGACTGCGCAAACGCTACAGCGTTCGCGCAGGCGCTTGAAACAAATGATAATGCTTTCTATCCCTGGCGCCGAGTGTACGCCATCGCAAACAGTCGCTGCACTGGATCAAAGACTGATGCCTACGTCGAAGACGAtgctg > 1:218519/1‑150 (MQ=255) aCGTTTGTGACTGCGCAAACGCTACAGCGTTCGCGCAGGCGCTTGAAACAAATGATAATGCTTTCTATCCCTGGCGCCGAGTGTACGCCATCGCAAACAGTCGCTGCACTGGATCAAAGACTGATGCCTACGTCGAAGACGATGCTGCgg < 2:1596869/150‑1 (MQ=255) aCGTTTGTGACTGCGCAAACGCTACAGCGTTCGCGCAGGCGCTTGAAACAAATGATAATGCTTTCTATCCCTGGCGCCGAGTGTACGCCATCGCAAACAGTCGCTGCACTGGATCAAAGACTGATGCCTACGTCGAAGACGATGCTGCgg > 2:1622922/1‑150 (MQ=255) aCGTTTGTGACTGCGCAAACGCTACAGCGTTCGCGCAGGCGCTTGAAACAAATGATAATGCTTTCTATCCCTGGCGCCGAGTGTACGCCATCGCAAACAGTCGCTGCACTGGATCAAAGACTGATGCCTACGTCGAAGACGATGCTGCgg < 1:2137579/150‑1 (MQ=255) cGTTTGTGACTGCGCAAACGCTACAGCGTTCGCGCAGGCGCTTGAAACAAATGATAATGCTTTCTATCCCTGGCGCCGAGTGTACGCCATCGCAAACAGTCGCTGCACTGGATCAAAGACTGATGCCTACGTCGAAGACGATGCTGCGGc > 1:1878918/1‑150 (MQ=255) tttGTGACTGCGCAAACGCTACAGCGTTCGCGCAGGCGCTTGAAACAAATGATAATGCTTTCTATCCCTGGCGCCGAGTGTACGCCATCGCAAACAGTCGCTGCACTGGATCAAAGACTGATGCCTACGTCGAAGACGATGCTGCGGccc < 1:976783/150‑1 (MQ=255) aagcgccTGCGCGAACGCTGTAGCGTTTGCGCGGGCGCTTGAAACAAATGATAATGCTTTCTATCCCTGGCGCCGAGTGTACGCCATCGCAAACAGTCGCTGCACTGGATCAAAGACTGATGCCTACGTCGAAGa > 2:267370/7‑135 (MQ=255) aagcgccTGCGCGAACGCTGTAGCGTTTGCGCGGGCGCTTGAAACAAATGATAATGCTTTCTATCCCTGGCGCCGAGTGTACGCCATCGCAAACAGTCGCTGCACTGGATCAAAGACTGATGCCTACGTCGAAGa < 1:267370/129‑1 (MQ=255) tgACTGCGCAAACGCTACAGCGTTCGCGCAGGCGCTTGAAACAAATGATAATGCTTTCTATCCCTGGCGCCGAGTGTACGCCATCGCAAACAGTCGCTGCACTGGATCAAAGACTGATGCCTACGTCGAAGACGATGCTGCGGCCCAGGt > 2:744628/1‑150 (MQ=255) aCTGCGCAAACGCTACAGCGTTCGCGCAGGCGCTTGAAACAAATGATAATGCTTTCTATCCCTGGCGCCGAGTGTACGCCATCGCAAACAGTCGCTGCACTGGATCAAAGACTGATGCCTACGTCGAAGACGATGCTGCGGCCCAGGTTg < 1:744628/150‑1 (MQ=255) tGCGCAAACGCTACAGCGTTCGCGCAGGCGCTTGAAACAAATGATAATGCTTTCTATCCCTGGCGCCGAGTGTACGCCATCGCAAACAGTCGCTGCACTGGATCAAAGACTGATGCCTACGTCGAAGACGATGCTGCGGCCCAGGTTGcc > 2:2353811/1‑150 (MQ=255) gcgcAAACGCTACAGCGTTCGCGCAGGCGCTTGAAACAAATGATAATGCTTTCTATCCCTGGCGCCGAGTGTACGCCATCGCAAACAGTCGCTGCACTGGATCAAAGACTGATGCCTACGTCGAAGACGATGCTGCGGCCCAGGTTGCcg > 1:1439336/1‑150 (MQ=255) cgcAAACGCTACAGCGTTCGCGCAGGCGCTTGAAACAAATGATAATGCTTTCTATCCCTGGCGCCGAGTGTACGCCATCGCAAACAGTCGCTGCACTGGATCAAAGACTGATGCCTACGTCGAAGACGATGCTGCGGCCCAGGTTGCcgc < 2:1273831/150‑1 (MQ=255) gcgaaCGCTGTAGCGTTTGCGCAGGCGCTTGAAACAAATGATAATGCTTTCTATCCCTGGCGCCGAGTGTACGCCATCGCAAACAGTCGCTGCACTGGATCAAAGACTGATGCCTACGTCGAAGACGATGCTGCGGCCCAGGTTGCcgcg > 1:375766/4‑150 (MQ=255) gcAAACGCTACAGCGTTCGCGCAGGCGCTTGAAACAAATGATAATGCTTTCTATCCCTGGCGCCGAGTGTACGCCATCGCAAACAGTCGCTGCACTGGATCAAAGACTGATGCCTACGTCGaa > 1:254755/1‑123 (MQ=255) gcAAACGCTACAGCGTTCGCGCAGGCGCTTGAAACAAATGATAATGCTTTCTATCCCTGGCGCCGAGTGTACGCCATCGCAAACAGTCGCTGCACTGGATCAAAGACTGATGCCTACGTCGaa < 2:254755/123‑1 (MQ=255) gcAAAAGCTACAGCGTTCGCGCAGGCGCTTGAAACAAATGATAATGCTTTCTATCCCTGGCGCCGAGTGTACGCCATCGCAAACAGTCGCTGCACTGGATCAAAGACTGATGCCTACGTCGAAGACGATGCTGCGGCCCAGGTTGCcgcg > 1:1096216/1‑150 (MQ=255) aaaCGCTACAGCGTTCGCGCAGGCGCTTGAAACAAATGATAATGCTTTCTATCCCTGGCGCCGAGTGTACGCCATCGCAAACAGTCGCTGCACTGGATCAAAGACTGATGCCTACGTCGAAGAc > 1:784050/1‑124 (MQ=255) aaaCGCTACAGCGTTCGCGCAGGCGCTTGAAACAAATGATAATGCTTTCTATCCCTGGCGCCGAGTGTACGCCATCGCAAACAGTCGCTGCACTGGATCAAAGACTGATGCCTACGTCGAAGAc < 2:784050/124‑1 (MQ=255) aaCGCTACAGCGTTCGCGCAGGCGCTTGAAACAAATGATAATGCTTTCTATCCCTGGCGCCGAGTGTACGCCATCGCAAACAGTCGCTGCACTGGATCAAAGACTGATGCCTACGTCGAAGACGATGCTGCGGCCCAGGTTGCCGCGCAg > 2:2114867/1‑150 (MQ=255) aaCGCTACAGCGTTCGCGCAGGCGCTTGAAACAAATGATAATGCTTTCTATCCCTGGCGCCGAGTGTACGCCATCGCAAACAGTCGCTGCACTGGATCAAAGACTGATGCCTACGTCGAAGACGATGCTGCGGCCCAGGTTGCCGCGCAg > 1:1640005/1‑150 (MQ=255) aaCGCTACAGCGTTCGCGCAGGCGCTTGAAACAAATGATAATGCTTTCTATCCCTGGCGCCGAGTGTACGCCATCGCAAACAGTCGCTGCACTGGATCAAAGACTGATGCCTACGTCGAAGACGATGCTGCGGCCCAGGTTGCCGCGCAg < 2:1439336/150‑1 (MQ=255) cTACAGCGTTCGCGCAGGCGCTTGAAACAAATGATAATGCTTTCTATCCCTGGCGCCGAGTGTACGCCATCGCAAACAGTCGCTGCACTGGATCAAAGACTGATGCCTACGTCGAAGACGATGCTGCGGCCCAGGTTGCcg < 2:1794402/141‑1 (MQ=255) cTACAGCGTTCGCGCAGGCGCTTGAAACAAATGATAATGCTTTCTATCCCTGGCGCCGAGTGTACGCCATCGCAAACAGTCGCTGCACTGGATCAAAGACTGATGCCTACGTCGAAGACGATGCTGCGGCCCAGGTTGCcg > 1:1794402/1‑141 (MQ=255) tACAGCGTTCGCGCAGGCGCTTGAAACAAATGATAATGCTTTCTATCCCTGGCGCCGAGTGTACGCCATCGCAAACAGTCGCTGCACTGGATCAAAGACTGATGCCTACGTCGAAGACGATGCTGCGGCCCAg < 2:1348399/133‑1 (MQ=255) tACAGCGTTCGCGCAGGCGCTTGAAACAAATGATAATGCTTTCTATCCCTGGCGCCGAGTGTACGCCATCGCAAACAGTCGCTGCACTGGATCAAAGACTGATGCCTACGTCGAAGACGATGCTGCGGCCCAg > 1:1348399/1‑133 (MQ=255) tACAGCGTTCGCGCAGGCGCTTGAAACAAATGATAATGCTTTCTATCCCTGGCGCCGAGTGTACGCCATCGCAAACAGTCGCTGCACTGGATCAAAGACTGATGCCTACGTCGAAGACGATGCTGCGGCCCAGGTTGCCGCGCAGGAAAt > 2:1026767/1‑150 (MQ=255) | AAGGAGCAGCCACGGCCGGAAGGGCCTGCGCTCGACTTGGTGCTGGGGGGCTCGCAGATACTCATCGACACGACGCTGATCTTCCGGGTTCAGGCGACTGGTCATGGTGGGCCT‑CGTCAGGTAGACGTTTGTGACTGCGCAAACGCTACAGCGTTCGCGCAGGCGCTTGAAACAAATGATAATGCTTTCTATCCCTGGCGCCGAGTGTACGCCATCGCAAACAGTCGCTGCACTGGATCAAAGACTGATGCCTACGTCGAAGACGATGCTGCGGCCCAGGTTGCCGCGCAGGAAAT > NC_002947/735473‑735768 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |