BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_002947	772,763	G→A	5.4%	L141L (TTG→TTA)	PP_0664 →	homoserine dehydrogenase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	772,763	0	G	A	5.4%	330.2 / 4.4	110	L141L (TTG→TTA)	PP_0664	homoserine dehydrogenase
Reads supporting (aligned to +/- strand): ref base G (48/55); new base A (3/3); total (51/59)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.62e-01

Only 100 of 112 total aligned reads displayed.

GCCGACATCATCGCCGAGGCCACATTCACCAACCCCAAGGACGGTGAGCCGGCGGCAACCTTCTGCCGCTGGGCGCTGGAGGCGGGCAAGCACGTGGTCACCACCAACAAGGGGCCGATTGCCTTGCATGCCCAGGCACTCAAGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTCATGAGCGGCACACCGGTGCTGCGTATGGCGCGCCAGACC‑‑CTGGCGGGCGCGGGCTTGGTAGGTTTCGAG‑GGCATTCTCAACGGTACCTCTAACTATGTGCTCACG  >  NC_002947/772614‑772910

gcCGACATCATCGCCGAGGCCACATTCACCAACCCCAAGGACGGTGAGCCGGCGGCAACCTTCTGCCGCTGGGCGCTGGAGGCGGGCAAGCACGTGGTCACCACCAACAAGGGGCCGATTGCCTTGCATGCCCAGGCACTCAAGGCCTTg                                                                                                                                                        >  2:721661/1‑150 (MQ=255)

gcCGACATCATCGCCGAGGCCACATTCACCAACCCCAAGGACGGTGAGCCGGCGGCAACCTTCTGCCGCTGGGCGCTGGAGGCGGGCAAGCACGTGGTCACCACCAACAAGGGGCCGATTGCCTTGCATGCCCAGGCACTCAAGGCCTTg                                                                                                                                                        >  2:1086501/1‑150 (MQ=255)

  cGACATCATCGCCGAGGCCACATTCACCAACCCCAAGGACGGTGAGCCGGCGGCAACCTTCTGCCGCTGGGCGCTGGAGGCGGGCAAGCACGTGGTCACCACCAACAAGGGGCCGATTGCCTTGCATGCCCAGGCACTCAAGGCCTTGGc                                                                                                                                                      >  2:1251918/1‑150 (MQ=255)

   gACATCATCGCCGAGGCCACATTCACCAACCCCAAGGACGGTGAGCCGGCGGCAACCTTCTACCGCTGGGCGCTGGAGGCGGGCAAGCACGTTGTCACCACCAACAAGGGGCCGATTGCCTTGCATGCCCAGTCACTCAAGGCCTTGGCt                                                                                                                                                     >  1:1328401/1‑150 (MQ=255)

     catcatCGCCGAGGCCACATTCACCAACCCCAAGGACGGTGAGCCGGCGGCAACCTTCTGCCGCTGGGCGCTGGAGGCGGGCAAGCACGTGGTCACCACCAACAAGGGGCCGATTGCCTTGCATGCCCAGGCACTCAAGGCCTTGGCTaa                                                                                                                                                   <  2:412013/150‑1 (MQ=255)

      atcatcGCCGAGGCCACATTCACCAACCCCAAGGACGGTGAGCCGGCGGCAACCTTCTGCCGCTGGGCGCTGGAGGCGGGCAAGCACGTGGTCACCACCAACAAGGGGCCGATTGCCTTGCATGCCCAGGCACTCAAGGCCTTGGCTAAg                                                                                                                                                  >  2:797172/1‑150 (MQ=255)

      atcatcGCCGAGGCCACATTCACCAACCCCAAGGACGGTGAGCCGGCGGCAACCTTCTGCCGCTGGGCGCTGGAGGCGGGCAAGCACGTGGTCACCACCAACAAGGGGCCGATTGCCTTGCATGCCCAGGCACTCAAGGCCTTGGCTAAg                                                                                                                                                  <  1:947844/150‑1 (MQ=255)

         atagCCGAGGCCACATTCACCAACCCCAAGGACGGTGAACCGGCGGCAACCTTCTGCCGATGGGCGCTGGAGGCGGGCAAGCACGTGGTCACCACCAACAAGGGGCCGATTGCCTTGCATGCCCAGGCCCTCAAGGCCTTGGCTAAGGcc                                                                                                                                               >  2:133295/4‑150 (MQ=255)

               gAGGCCACATTCACCAAGCCCAAGGACGGTGAGCCGGCGGCAACCTTCTGCCGCTGGGCGCTGGAGGCGGGCAAGCACGTGGTCACCACCAACAAGGGGCCGATTGCCTTGCATGCCCAGGCACTCAAGGCCTTGGCTAAGGCCAACAAt                                                                                                                                         <  1:425105/150‑1 (MQ=255)

               gAGGCCACATTCACCAACCCCAAGGACGGTGAGCCGGCGGCAACCTTCTGCCGCTGGGCGCTGGAGGCGGGCAAGCACGTGGTCACCACCAACAAGGGGCCGATTGCCTTGCATGCCCAGGCACTCAAGGCCTTAGCCAAGGcctt                                                                                                                                             <  2:912049/146‑3 (MQ=255)

               gAGGCCACATTCACCAACCCCAAGGACGGTGAGCCGGCGGCAACCTTCTGCCGCTGGGCGCTGGAGGCGGGCAAGCACGTGGTCACCACCAACAAGGGGCCGATTGCCTTGCATGCCCAGGCACTCAAGGCCTTAGCCAAGGcctt                                                                                                                                             >  1:912049/1‑144 (MQ=255)

                 ggCCACATTCACCAACCCCAAGGACGGTGAGCCGGCGGCAACCTTCTGCCGCTGGGCGCTGGAGGCGGGCAAGCACGTGGTCACCACCAACAAGGGGCCGATTGCCTTGCATGCCCAGGCACTCAAGGCCTTGGCTAAGGCCAACAAtgt                                                                                                                                       <  1:797172/150‑1 (MQ=255)

                  gCCACATTCACCAACCCCAAGGACGGTGAGCCGGCGGCAACCTTCTGCCGCTGGGCGCTGGAGGCGGGCAAGCACGTGGTCACCACCAACAAGGGGCCGATTGCCTTGCATGCCCAGGCACTCAAGGCCTTGGCTAAGGCCAACAAtgtg                                                                                                                                      <  1:332093/150‑1 (MQ=255)

                    cacaTTCACCAACCCCAAGGACGGTGAGCCGGCGGCAACCTTCTGCCGCTGGGCGCTGGAGGCGGGCAAGCACGTGGTCACCACCAACAAGGGGCCGATTGCCTTGCATGCCCAGGCACTCAAGGCCTTGGCTAAGGCCAACAATGTGTc                                                                                                                                    >  2:1804587/1‑150 (MQ=255)

                        ttCACCAACCCCAAGGACGGTGAGCCGGCGGCAACCTTCTGCCGCTGGGCGCTGGAGGCGGGCAAGCACGTGGTCACCACCAACAAGGGGCCGATTGCCTTGCATGCCCAGGCACTCAAGGCCTTGGCTAAGGCCAACAATGTGTCGTTc                                                                                                                                >  2:885971/1‑150 (MQ=255)

                           aCCAACCCCAAGGACGGTGAGCCGGCGGCAACCTTCTGCCGCTGGGCGCTGGAGGCGGGCAAGCACGTGGTCACCACCAACAAGGGGCCGATTGCCTTGCATGCCCAGGCACTCAAGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGaa                                                                                                                             <  2:2137881/150‑1 (MQ=255)

                           aCCAACCCCAAGGACGGTGAGCCGGCGGCAACCTTCTGCCGCTGGGCGCTGGAGGCGGGCAAGCACGTGGTCACCACCAACAAGGGGCCGATTGCCTTGCATGCCCAGGCACTCAAGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGaa                                                                                                                             <  1:1729460/150‑1 (MQ=255)

                           aCCAACCCCAAGGACGGTGAGCCGGCGGCAACCTTCTGCCGCTGGGCGCTGGAGGCGGGCAAGCACGTGGTCACCACCAACAAGGGGCCGATTGCCTTGCATGCCCAGGCACTCAAGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGaa                                                                                                                             >  1:2227042/1‑150 (MQ=255)

                           aCCAACCCCAAGGACGGTGAGCCGGCGGCAACCTTCTGCCGCTGGGCGCTGGAGGCGGGCAAGCACGTGGTCACCACCAACAAGGGGCCGATTGCCTTGCATGCCCAGGCACTCAAGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGaa                                                                                                                             >  1:2128626/1‑150 (MQ=255)

                            ccAACCCCAAGGACGGTGAGCCGGCGGCAACCTTCTGCCGCTGGGCGCTGGAGGCGGGCAAGCACGTGGTCACCACCAACAAGGGGCCGATTGCCTTGCATGCCCAGGCACTCAAGGCCTTTGCTAAGGCCAACAATGTGTCGTTCGAAt                                                                                                                            <  2:7670/150‑1 (MQ=255)

                             cAACCCCAAGGACGGTGAGCCGGCGGCAACCTTCTGCCGCTGGGCGCTGGAGGCGGGCAAGCACGTGGTCACCACCAACAAGGGGCCGATTGCCTTGCATGCCCAGGCACTCAAGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGaa                                                                                                                             <  2:1678310/148‑1 (MQ=255)

                             cAACCCCAAGGACGGTGAGCCGGCGGCAACCTTCTGCCGCTGGGCGCTGGAGGCGGGCAAGCACGTGGTCACCACCAACAAGGGGCCGATTGCCTTGCATGCCCAGGCACTCAAGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGAATa                                                                                                                           >  1:1063493/1‑150 (MQ=255)

                                 cccAAGGACGGTGAGCCGGCGGCAACCTTCTGCCGCTGGGCGCTGGAGGCGGGCAAGCACGTGGTCACCACCAACAAGGGGCAGCTCGGTTTGCTGGACGAGGCGCTCAAGGCCTTGGCTCAGGCCAACAATGTGTCGTTCGAATACGaa                                                                                                                       >  1:2090122/1‑150 (MQ=255)

                                  ccAAGGACGGTGAGCCGGCGGCAACCTTCTGCCGCTGGGCGCTGGAGGCGGGCAAGCACGTGGTCACCACCAACAAGGGGCCGATTGCCTTGCATGCCCAGGCACTCAAGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAg                                                                                                                      <  1:109993/150‑1 (MQ=255)

                                  ccAAGGACGGTGAGCCGGCGGCAACCTTCTGCCGCTGGGCGCTGGAGGCGGGCAAGCACGTGGTCACCACCAACAAGGGGCCGATTGCCCTGCATGCCGAGGCACTCAAGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAg                                                                                                                      <  2:214323/150‑1 (MQ=255)

                                  ccAAGGACGGTGAGCCGGCGGCAACCTTCTGCCGCTGGGCGCCGGAGGCGGGCAAGTACGGGGTCACCACCAACAAGGGGCCGATTGCCTTGCATGCCCAGGCACTCAAGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAg                                                                                                                      >  1:1253335/1‑150 (MQ=255)

                                   cAAGGACGGTGAGCCGGCGGCAACCTTCTGCCGCTGGGCGCTGGAGGCGGGCAAGCACGTGGTCACCACCAACAAGGGGCCGATTGCCTTGCATGCCCAGGCACTCAAGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAgg                                                                                                                     >  1:1965988/1‑150 (MQ=255)

                                   cAAGGACGGTGAGCCGGCGGCAACCTTCTGCCGCTGGGCGCTGGAGGCGGGCAAGCACGTGGTCACCACCAACAAGGGGCCGATTGCCTTGCATGCCCAGGCACTCAAGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAgg                                                                                                                     >  2:1439012/1‑150 (MQ=255)

                                    aaGGACGGTGAGCCGGCGGCAACCTTCTGCCGCTGGGCGCTGGAGGCGGGCAAGCACGTGGTCACCACCAACAAGGGGCCGATTGCCTTGCATGCCCAGGCACTCAAGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAGgc                                                                                                                    <  1:1728094/150‑1 (MQ=255)

                                          ggTGAGCCGGCGGCAACCTTCTGCCGCTGGGCGCTGGAGGCGGGCAAGCACGTGGTCACCACCAACAAGGGGCCGATTGCCTTGCATGCCCAGGCACTCAAGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTc                                                                                                              <  1:1366886/150‑1 (MQ=255)

                                          ggTGAGCCGGCGGCAACCTTCTGCCGCTGGGCGCTGGAGGCGGGCAAGCACGTGGTCACCACCAACAAGGGGCCGATTGCCTTGCATGCCCAGGCACTCAAGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTc                                                                                                              >  2:2047640/1‑150 (MQ=255)

                                               gCCGGCGGCAACCTTCTGCCGCTGGGCGCTGGAGGCGGGCAAGCACGTGGTCACCACCAACAAGGGGCCGATTGCCTTGCATGCCCAGGCACTCAAGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTCATGAg                                                                                                         <  1:721661/150‑1 (MQ=255)

                                               gCCGGCGGCAACCTTCTGCCGCTGGGCGCGGGAGGCGGGCAAGCACGTGGTCACCACCAACAAGGGGCCGATTGCCTTGCATGCCCAGGCACTCAAGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTCATGAg                                                                                                         >  1:1529736/1‑150 (MQ=255)

                                                ccGGCGGCAACCTTCTGCCGCTGGGCGCTGGAGGCGGGCAAGCACTTGGTCACCACCAACAAGGGGCCGATTGCCTTGCATGCCCAGGCACTCAAGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTCATGAgt                                                                                                        <  1:1669844/150‑2 (MQ=255)

                                                 ggccggcAACCTTCTGCCGCTGGGCGCTGGAGGCGGGCAAGCACGTGGTCACCACCAACAAGGGGCCGATTGCCTTGCATGCCCAGGCACTCAAGGACTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTCATGAGCg                                                                                                       >  1:2269215/4‑150 (MQ=255)

                                                         aCCTTCTGCCGCTGGGCGCTGGAGGCGGGCAAGCACGTGGTCACCACCAACAAGGGGCCGATTGCCTTGCATGCCCAGGCACTCAAGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTCATGAGCGGCACACCg                                                                                               <  2:1755640/150‑1 (MQ=255)

                                                                 ccGCTGGGCGCTGGAGGCGGGCAAGCACGTGGTCACCACCAACAAGGGGCCGATTGCCTTGCATGCCCAGGCACTCAAGGCCTTGACTAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTCATGAGCGGCACACCGGTGCTGCg                                                                                       >  1:1804307/1‑150 (MQ=255)

                                                                   gCTGGGCGCTGGAGGCGGGCAAGCACGTGGTCACCACCAACAAGGGGCCGATTGCCTTGCATGCCCAGGCACTCAAGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTCATGAGCGGCACACCGGTGCTGCGTa                                                                                     <  2:1965988/150‑1 (MQ=255)

                                                                       ggCGCTGGAGGCGGGCAAGCACGTGGTCACCACCAACAAGGGGCCGATTGCCTTGCATGCCCAGGCACTCAAGGCCTTAGCCAAGGccttga                                                                                                                                           <  1:1739337/92‑5 (MQ=255)

                                                                       ggCGCTGGAGGCGGGCAAGCACGTGGTCACCACCAACAAGGGGCCGATTGCCTTGCATGCCCAGGCACTCAAGGCCTTAGCCAAGGccttga                                                                                                                                           >  2:1739337/1‑88 (MQ=255)

                                                                         cgcTGGAGGCGGGCAAGCACGTGGTCACCACCAACAAGGGGCCGATTGCCTTGCATGCCCAGGCACTCAAGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTCATGAGCGGCACACCGGTGCTGCGTATGgcgc                                                                               <  2:1458214/150‑1 (MQ=255)

                                                                           cTGGAGGCGGGCAAGCACGTGGTAACCACCAAAAAGTGGCCGATTGTCTTGCATGCCCAGGCACTCAAGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTCATGAGCGGCACACCGGTGCTGCGTATGgcgcgc                                                                             <  1:2338717/150‑1 (MQ=255)

                                                                                   gggCAAGCACGTGGTCACCACCAACAAGGGGCCGATTGCCTTGCATGCCCAGGCACTCAAGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTCATGAGCGGCACACCGGTGCTGCGTATGGCGCGCCAGACC‑‑Ct                                                                   >  2:1252898/1‑150 (MQ=255)

                                                                                     gCAAGCACGTGGTCACCACCAACAAGGGGCCGATTGCCTTGCATGCCCAGGCACTCAAGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTCATGAGCGGCACACCGGTGCTGCGTATGGCGCGCCAGACC‑‑CTgg                                                                 >  2:2247624/1‑150 (MQ=255)

                                                                                      cAAGCACGTGGTCACCACCAACAAGGGGCCGATTGCCTTGCATGCCCAGGCACTCAAGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTCATGAGCGGCACACCGGTGCTGCGTATGGCGCGCCAGACC‑‑CTggc                                                                <  1:2116641/150‑1 (MQ=255)

                                                                                       aaGCACGTGGTCACCACCAACAAGGGGCCGATTGCCTTGCATGCCCAGGCACTCAAGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTCATGAGCGGCACACCGGTGCTGCGTATGGCGCGCCAGAc                                                                        >  2:1413600/1‑143 (MQ=255)

                                                                                       aaGCACGTGGTCACCACCAACAAGGGGCCGATTGCCTTGCATGCCCAGGCACTCAAGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTCATGAGCGGCACACCGGTGCTGCGTATGGCGCGCCAGAc                                                                        <  1:1413600/143‑1 (MQ=255)

                                                                                        aGCACGTGGTCACCACCAACAAGGGGCCGATTGCCTTGCATGCCCAGGCACTCAAGGCTTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTCATGAGCGGCACACCGGTGCTGCGTATGGCGCGCCAGACC‑‑CTggcgg                                                              <  1:826554/150‑1 (MQ=255)

                                                                                        aGCACGTGGTCACCACCAACAAGGGGCCGATTGCCTTGCATGCCCAGGCACTCAAGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTCATGAGCGGCACACCGGTGCTGCGTATGGCGCGCCAGACC‑‑CTggcgg                                                              >  1:1013817/1‑150 (MQ=255)

                                                                                         gCACGTGGTCACCACCAACAAGGGGCCGATTGCCTTGCATGCCCAGGCACTCAAGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTCATGAGCGGCACACCGGTGCTGCGTATGGCGCGCCAGACC‑‑CTggcggg                                                             >  1:765306/1‑150 (MQ=255)

                                                                                         gCACGTGGTCACCACCAACAAGGGGCCGATTGCCTTGCATGCCCAGGCACTCAAGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTCATGAGCGGCACACCGGTGCTGCGTATGGCGCGCCAGACC‑‑CTggcggg                                                             >  1:764240/1‑150 (MQ=255)

                                                                                             gTGGTCACCACCAACAAGGGGCCGATTGCCTTGCATGCCCAGGCACTCAAGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTCATGAGCGGCACACCgg                                                                                              <  1:1909607/115‑1 (MQ=255)

                                                                                             gTGGTCACCACCAACAAGGGGCCGATTGCCTTGCATGCCCAGGCACTCAAGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTCATGAGCGGCACACCgg                                                                                              >  2:1909607/1‑115 (MQ=255)

                                                                                             gTGGTCACCACCAACAAGGGGCCGATTGCCTTGCATGCCCAGGCACTCAAGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTCATGAGCGGCACACCGGTGCTGCGTATGGCGCGCCAGACC‑‑CTGgcgggcgcg                                                         >  1:1216520/1‑150 (MQ=255)

                                                                                               ggTCACCACCAACAAGGGGCCGATTGCCTTGCATGCCCAGGCACTCAAGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTCATGAGCGGCACACCGGTGCTGCGTATGGCGCGCCAGACC‑‑Ct                                                                   <  2:1781275/138‑1 (MQ=255)

                                                                                               ggTCACCACCAACAAGGGGCCGATTGCCTTGCATGCCCAGGCACTCAAGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTCATGAGCGGCACACCGGTGCTGCGTATGGCGCGCCAGACC‑‑Ct                                                                   >  1:1781275/1‑138 (MQ=255)

                                                                                                gTCACCACCAACAAGGGGCCGATTGCCTTGCATGCCCAGGCACTCAAGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTCATGAGCGGCACACCGGTGCTGCGTATGGCGCGCCAGACC‑‑CTGgcgggcgcgggc                                                      >  2:16105/1‑150 (MQ=255)

                                                                                                 tCACCACCAACAAGGGGCCGATTGCCTTGCATGCCCAGGCACTCAAGGCGTTGGCTAAGGACAACAATGTGTCGTTCGCATACGAAGGCACCGTAATGAGCGGCACACCGGTGCTGCGTATGGCGCGCCAGACC‑‑CTGGCGGGCGCGGGCt                                                     >  2:494514/1‑150 (MQ=255)

                                                                                                    ccaccaACAAGGGGCCGATTGCCTTGCATGCCCAGGCACTCAAGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTCATGAGCGGCACACCGGTGCTGCGTATGGCGCGCCAGACC‑‑CTGGCGGGCGCGGGCTTgg                                                  <  2:2090122/150‑1 (MQ=255)

                                                                                                     caccaACAAGGGGCCGATTGCCTTGCATGCCCAGGCACTCAAGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTCATGAGCGGCACACCGGTGCTGCGTATGgcgcgc                                                                             <  1:1821857/124‑1 (MQ=255)

                                                                                                     caccaACAAGGGGCCGATTGCCTTGCATGCCCAGGCACTCAAGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTCATGAGCGGCACACCGGTGCTGCGTATGgcgcgc                                                                             >  2:1821857/1‑124 (MQ=255)

                                                                                                       ccaACAAGGGGCCGATTGCCTTGCATGCCCAGGCACTCAAGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTCATGAGCGGCACACCGGTGCTGCGTATGGCGCGCCAGACC‑‑CTGGCGGGCGCGGGCTTGGTAg                                               <  1:2047640/150‑1 (MQ=255)

                                                                                                         aacaaGGGGCCGATTGCCTTGCATGCCCAGGCACTCAAGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTCATGAGCGGCACACCGGTGCTGCGTATGGCGCGCCAGACC‑‑CTGGCGGGCGCGGGCTTGGTAGGt                                             <  2:2227042/150‑1 (MQ=255)

                                                                                                            aaGGGGCCGATTGCCTTGCATGCCCAGGCACTCAAGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTCATGAGCGGCACACCGGTGCTGCGTATGGCGCGCCAGACC‑‑CTGGCGGGCGCGGGCTTGGTAGGTTTc                                          <  1:16105/150‑1 (MQ=255)

                                                                                                               gggCCGATTGCCTTGCATGCCCAGGCACTCAAGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTCATGAGCgg                                                                                                      >  1:1936227/1‑89 (MQ=255)

                                                                                                               gggCCGATTGCCTTGCATGCCCAGGCACTCAAGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTCATGAGCgg                                                                                                      <  2:1936227/89‑1 (MQ=255)

                                                                                                               gggCCGATTGCCTTGCATGCCCAGGCACTCAAGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTCATGAGCGGCACACCGGTGCTGCGTATGGCGCGCCAGACC‑‑CTGGCGGGCGCGGGCTTGGTAGGTTTCGAg                                       >  2:1461059/1‑150 (MQ=255)

                                                                                                               cgagatcttGCCTTTTATTCCCAGTCACTCAAGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTCATGAGCGGCACACCGGTGCTGCGTATGGCGCGCCAGACC‑‑CTGGCGGGCGCGGGCTTGGTAGGTTTCGAg                                       <  2:1118033/143‑1 (MQ=255)

                                                                                                                ggCCGATTGCCTTGCATGCCCAGGCACTCAAGGCCTTGGCTAAGGCCCACACTGTTTCTCTCGAATACGAAGGCGCCGTCATGAGCGGCACACCGCTGGTACTTATTGCTCGCCAGACC‑‑CTGGCGGGCGCGGGCTTGGTAGGTTTCGAg‑g                                     <  1:1252898/150‑1 (MQ=255)

                                                                                                                ggCCGATTGCCTTGCATGCCCAGGCACTCAAGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTCATGAGCGGCACACCGGTGCTGCGTATGGCGCGCCAGACC‑‑CTGGCGGGCGCGGGCTTGGTAGGTTTCGAg‑g                                     <  2:1452797/150‑1 (MQ=255)

                                                                                                                ggCCGATTGCCTTGCATGCCCAGGCACTCAAGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTCATGAGCGGCACACCGGTGCTGCGTATGGCGCGCCAGACC‑‑CTGGCGGGCGCGGGCTTGGTAGGTTTCGAg‑g                                     <  2:1063493/150‑1 (MQ=255)

                                                                                                                ggCCGATTGCCTTGCATGCCCAGGCACTCAAGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTCATGAGCGGCACACCGGTGCTGCGTATGGCGCGCCAGACC‑‑CTGGCGGGCGCGGGCTTGGTAGGTTTCGAg‑g                                     <  1:1086501/150‑1 (MQ=255)

                                                                                                                 gCCGAGTACCTGGCATGCCCAGGCACTCAAGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTCATGAGCGGCACACCGGTGCTGCGTATGGCGCGCCAGACC‑‑CTGGCGGGCGCGGGCTTGGTAGGTTTCGAg‑gg                                    >  2:1902734/1‑150 (MQ=255)

                                                                                                                   cGATTGCCTTGCATGCCCAGGCACTCAAGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTCATGAGCGGCACACCGGTGCTGCGTATGGCGCGCCAGACC‑‑CTGGCGGGCGCGGGCTTGGTAGGTTTCGAG‑GGCa                                  >  2:1881921/1‑150 (MQ=255)

                                                                                                                    gATTGCCTTGCATGCCCAGGCACTCAAGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTCATGAGCGGCACACCGGTGCTGCGTATGGCGCGCCAGACC‑‑CTGGCGGGCGCGGGCTTGGTAGGTTTCGAG‑GGCAt                                 >  2:2011963/1‑150 (MQ=255)

                                                                                                                    gATTGCCTTGCATGCCCAGGCACTCAAGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTCATGAGCGGCACACCGGTGCTGCGTATGGCGCGCCAGACC‑‑CTGGCGGGCGCGGGCTTGGTAGGTTTCGAG‑GGCAt                                 >  2:1051941/1‑150 (MQ=255)

                                                                                                                      ttGCCTTGCATGCCCAGGCACTCAAGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTCATGAGCGGCACACCGGTGCTGCGTATGGCGCGCCAGACC‑‑CTGGCGGGCGCGGGCTTGGTAGGTTTCGAG‑GGCATtc                               <  1:885971/150‑1 (MQ=255)

                                                                                                                          cTTGCATGCCCAGGCACTCAAGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTCATGAGCGGCACACCGGTGCTGCGTATGGCGCGCCAGACC‑‑CTGGCGGGCGCGGGCTTGGTAGGTTTCGAG‑GGCATTCTCaa                           <  1:1804587/150‑1 (MQ=255)

                                                                                                                          cTTGCATGCCCAGGCACTCAAGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTCATGAGCGGCACACCGGTGCTGCGTATGGCGCGCCAGACC‑‑CTGGCGGGCGCGGGCTTGGTAGGTTTCGAG‑GGCATTCTCaa                           <  1:1439012/150‑1 (MQ=255)

                                                                                                                          cTTGCATGCCCAGGCACTCAAGGCCTTGACTAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTCATGAGCGGCACACCGGTGCTGCGTATGGCGCGCCAGACC‑‑CTGGCGGGCGCGGGCTTGGTAGGTTTCGAG‑GGCATTCTCaa                           <  2:1804307/150‑1 (MQ=255)

                                                                                                                                tGCCCAGGCACTCAAGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTCATGAGCGGCACACCGGTGCTGCGTATGGCGCGCCAGACC‑‑CTGGCGGGCGCGGGCTTGGTAGGTTTCGAG‑GGCATTCTCAACGGTAc                     <  1:1475815/150‑1 (MQ=255)

                                                                                                                                 gCCCAGGCACTCAAGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTCATGAGCGGCACACCGGTGCTGCGTATGGCGCGCCAGACC‑‑CTGGCGGGCGCGGGCTTGGTAGGTTTCGAG‑GGCATTCTCAACGGTAcc                    >  1:339019/1‑150 (MQ=255)

                                                                                                                                  cccAGGCACTCAAGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTCATGAGCGGCACACCGGTGCTGCGTATGGCGCGCCAGACC‑‑CTGGCGGGCGCGGGCTTGGTAGGTTTCGAG‑GGCATTCTCAACGGTAccc                   <  2:1658289/150‑2 (MQ=255)

                                                                                                                                    cAGGCACTCAAGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTCATGAGCGGCACACCGGTGCTGCGTATGGCGCGCCAGACC‑‑CTGGCGGGCGCGGGCTTGGTAGGTTTCGAg‑g                                     <  2:1680623/130‑1 (MQ=255)

                                                                                                                                    cAGGCACTCAAGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTCATGAGCGGCACACCGGTGCTGCGTATGGCGCGCCAGACC‑‑CTGGCGGGCGCGGGCTTGGTAGGTTTCGAg‑g                                     >  1:1680623/1‑130 (MQ=255)

                                                                                                                                      ggCAGTAAAGGTCTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTCATGAGCGGCACACCGGTGCTGCGTATGGCGCGCCAGACC‑‑CTGGCGGGCGCGGGCTTGGTAGGTTTCGAG‑GGCATTCTCAACGGTACCTCTaa               <  2:1878093/150‑1 (MQ=255)

                                                                                                                                          cTCAAGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTCATGAGCGGCACACCGGTGCTGCGTATg                                                                                   <  2:2135799/81‑1 (MQ=255)

                                                                                                                                          cTCAAGGCCATGGATAAGGCCAACAAGGTGGCGTTCGAATACGAAGGCGCCGTCATGAGGGGCACACCGGTGCTGCGTATGGCGCGCCAGACC‑‑CTGGCGGGCGCGGGCTTGGTAGTTTTCGAG‑GGCATTCTCAACGGTACCTCTAACTAt           <  2:627617/150‑1 (MQ=255)

                                                                                                                                           tCAAGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTCATGa                                                                                                          >  1:2187102/1‑57 (MQ=255)

                                                                                                                                           tCAAGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTCATGa                                                                                                          <  2:2187102/57‑1 (MQ=255)

                                                                                                                                             ttggCCTTAGCCAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTCATGAGCGGCACACCGGTGCTGCGTATGGCGCGCCAGACC‑‑CTGGCGGGCGCGGGCTTGGTAGGTTTCGAg‑g                                     <  2:1105155/119‑1 (MQ=255)

                                                                                                                                             ttggCCTTAGCCAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTCATGAGCGGCACACCGGTGCTGCGTATGGCGCGCCAGACC‑‑CTGGCGGGCGCGGGCTTGGTAGGTTTCGAg‑g                                     >  1:1105155/3‑121 (MQ=255)

                                                                                                                                             aaGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTCATGAGCGGCACACCGGTGCTGCGTATGGCGCGCCAGACC‑‑CTGGCGGGCGCGGGCTTGGTAGGTTTCGAG‑GGCATTCTCAACGGTACCTCTAACTAtgtg        >  2:1003354/1‑150 (MQ=255)

                                                                                                                                             aaGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTCATGAGCGGCACACCGGTGCTGCGTATGGCGCGCCAGACC‑‑CTGGCGGGCGCGGGCTTGGTAGGTTTCGAG‑GGCATTCTCAACGGTACCTCTAACTAtgtg        >  2:826013/1‑150 (MQ=255)

                                                                                                                                              aGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTCATGAGCGGCACACCGGTGCTGCGTATGGCGCGCCAGACC‑‑CTGGCGGGCGCGGGTTTGGTAGGTTTCGAG‑GGCATTCTCaa                           <  1:442748/130‑1 (MQ=255)

                                                                                                                                              aGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTCATGAGCGGCACACCGGTGCTGCGTATGGCGCGCCAGACC‑‑CTGGCGGGCGCGGGCTTGGTAGGTTTCGAG‑GGCATTCTCaa                           >  2:442748/1‑130 (MQ=255)

                                                                                                                                                 ccTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTCATGAGCGGCACACCGGTGCTGCGTATGGCGCGCCAGACC‑‑CTGGCGGGCGCGGGCTTGGTAGGTTTCGAg‑g                                     >  1:1441052/1‑117 (MQ=255)

                                                                                                                                                 ccTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTCATGAGCGGCACACCGGTGCTGCGTATGGCGCGCCAGACC‑‑CTGGCGGGCGCGGGCTTGGTAGGTTTCGAg‑g                                     <  2:1441052/117‑1 (MQ=255)

                                                                                                                                                 ccTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTCATGAGCGGCACACCGGTGCTGCGTATGGCGCGCCAGACC‑‑CTGGCGGGCGCGGGCTTGGTAGGTTTCGAG‑GGCATTCTCAACGGTACCTCTAACTATGTGCTCa    >  1:1860978/1‑150 (MQ=255)

                                                                                                                                                   ttGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTCATGAGCGGCACACCGGTGCTGCGTATG‑‑GCGCAAGGCCTGCAGTCGGGCGCGGGCTTGGTAGGTTTAGAGCGGAACTC‑CAACCGTACCGTGAACTATGTGCTCAcg  >  1:1853676/1‑150 (MQ=255)

GCCGACATCATCGCCGAGGCCACATTCACCAACCCCAAGGACGGTGAGCCGGCGGCAACCTTCTGCCGCTGGGCGCTGGAGGCGGGCAAGCACGTGGTCACCACCAACAAGGGGCCGATTGCCTTGCATGCCCAGGCACTCAAGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTCATGAGCGGCACACCGGTGCTGCGTATGGCGCGCCAGACC‑‑CTGGCGGGCGCGGGCTTGGTAGGTTTCGAG‑GGCATTCTCAACGGTACCTCTAACTATGTGCTCACG  >  NC_002947/772614‑772910

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`