| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 772,766 | T→C | 5.4% | A142A (GCT→GCC) | PP_0664 → | homoserine dehydrogenase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 772,766 | 0 | T | C | 5.4% | 340.7 / 3.9 | 109 | A142A (GCT→GCC) | PP_0664 | homoserine dehydrogenase |
| Reads supporting (aligned to +/- strand): ref base T (47/56); new base C (3/3); total (50/59) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.90e-01 | |||||||||||
Only 100 of 112 total aligned reads displayed.
GACATCATCGCCGAGGCCACATTCACCAACCCCAAGGACGGTGAGCCGGCGGCAACCTTCTGCCGCTGGGCGCTGGAGGCGGGCAAGCACGTGGTCACCACCAACAAGGGGCCGATTGCCTTGCATGCCCAGGCACTCAAGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTCATGAGCGGCACACCGGTGCTGCGTATGGCGCGCCAGACC‑‑CTGGCGGGCGCGGGCTTGGTAGGTTTCGAG‑GGCATTCTCAACGGTACCTCTAACTATGTGCTCACGCGCAT > NC_002947/772617‑772915 | catcatCGCCGAGGCCACATTCACCAACCCCAAGGACGGTGAGCCGGCGGCAACCTTCTGCCGCTGGGCGCTGGAGGCGGGCAAGCACGTGGTCACCACCAACAAGGGGCCGATTGCCTTGCATGCCCAGGCACTCAAGGCCTTGGCTaa < 2:412013/150‑1 (MQ=255) atcatcGCCGAGGCCACATTCACCAACCCCAAGGACGGTGAGCCGGCGGCAACCTTCTGCCGCTGGGCGCTGGAGGCGGGCAAGCACGTGGTCACCACCAACAAGGGGCCGATTGCCTTGCATGCCCAGGCACTCAAGGCCTTGGCTAAg > 2:797172/1‑150 (MQ=255) atagCCGAGGCCACATTCACCAACCCCAAGGACGGTGAACCGGCGGCAACCTTCTGCCGATGGGCGCTGGAGGCGGGCAAGCACGTGGTCACCACCAACAAGGGGCCGATTGCCTTGCATGCCCAGGCCCTCAAGGCCTTGGCTAAGGcc > 2:133295/4‑150 (MQ=255) gAGGCCACATTCACCAAGCCCAAGGACGGTGAGCCGGCGGCAACCTTCTGCCGCTGGGCGCTGGAGGCGGGCAAGCACGTGGTCACCACCAACAAGGGGCCGATTGCCTTGCATGCCCAGGCACTCAAGGCCTTGGCTAAGGCCAACAAt < 1:425105/150‑1 (MQ=255) gAGGCCACATTCACCAACCCCAAGGACGGTGAGCCGGCGGCAACCTTCTGCCGCTGGGCGCTGGAGGCGGGCAAGCACGTGGTCACCACCAACAAGGGGCCGATTGCCTTGCATGCCCAGGCACTCAAGGCCTTAGCCAAGGcctt < 2:912049/146‑3 (MQ=255) gAGGCCACATTCACCAACCCCAAGGACGGTGAGCCGGCGGCAACCTTCTGCCGCTGGGCGCTGGAGGCGGGCAAGCACGTGGTCACCACCAACAAGGGGCCGATTGCCTTGCATGCCCAGGCACTCAAGGCCTTAGCCAAGGcctt > 1:912049/1‑144 (MQ=255) ggCCACATTCACCAACCCCAAGGACGGTGAGCCGGCGGCAACCTTCTGCCGCTGGGCGCTGGAGGCGGGCAAGCACGTGGTCACCACCAACAAGGGGCCGATTGCCTTGCATGCCCAGGCACTCAAGGCCTTGGCTAAGGCCAACAAtgt < 1:797172/150‑1 (MQ=255) gCCACATTCACCAACCCCAAGGACGGTGAGCCGGCGGCAACCTTCTGCCGCTGGGCGCTGGAGGCGGGCAAGCACGTGGTCACCACCAACAAGGGGCCGATTGCCTTGCATGCCCAGGCACTCAAGGCCTTGGCTAAGGCCAACAAtgtg < 1:332093/150‑1 (MQ=255) cacaTTCACCAACCCCAAGGACGGTGAGCCGGCGGCAACCTTCTGCCGCTGGGCGCTGGAGGCGGGCAAGCACGTGGTCACCACCAACAAGGGGCCGATTGCCTTGCATGCCCAGGCACTCAAGGCCTTGGCTAAGGCCAACAATGTGTc > 2:1804587/1‑150 (MQ=255) ttCACCAACCCCAAGGACGGTGAGCCGGCGGCAACCTTCTGCCGCTGGGCGCTGGAGGCGGGCAAGCACGTGGTCACCACCAACAAGGGGCCGATTGCCTTGCATGCCCAGGCACTCAAGGCCTTGGCTAAGGCCAACAATGTGTCGTTc > 2:885971/1‑150 (MQ=255) aCCAACCCCAAGGACGGTGAGCCGGCGGCAACCTTCTGCCGCTGGGCGCTGGAGGCGGGCAAGCACGTGGTCACCACCAACAAGGGGCCGATTGCCTTGCATGCCCAGGCACTCAAGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGaa < 2:2137881/150‑1 (MQ=255) aCCAACCCCAAGGACGGTGAGCCGGCGGCAACCTTCTGCCGCTGGGCGCTGGAGGCGGGCAAGCACGTGGTCACCACCAACAAGGGGCCGATTGCCTTGCATGCCCAGGCACTCAAGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGaa < 1:1729460/150‑1 (MQ=255) aCCAACCCCAAGGACGGTGAGCCGGCGGCAACCTTCTGCCGCTGGGCGCTGGAGGCGGGCAAGCACGTGGTCACCACCAACAAGGGGCCGATTGCCTTGCATGCCCAGGCACTCAAGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGaa > 1:2227042/1‑150 (MQ=255) ccAACCCCAAGGACGGTGAGCCGGCGGCAACCTTCTGCCGCTGGGCGCTGGAGGCGGGCAAGCACGTGGTCACCACCAACAAGGGGCCGATTGCCTTGCATGCCCAGGCACTCAAGGCCTTTGCTAAGGCCAACAATGTGTCGTTCGAAt < 2:7670/150‑1 (MQ=255) cAACCCCAAGGACGGTGAGCCGGCGGCAACCTTCTGCCGCTGGGCGCTGGAGGCGGGCAAGCACGTGGTCACCACCAACAAGGGGCCGATTGCCTTGCATGCCCAGGCACTCAAGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGaa > 1:1678310/1‑148 (MQ=255) cAACCCCAAGGACGGTGAGCCGGCGGCAACCTTCTGCCGCTGGGCGCTGGAGGCGGGCAAGCACGTGGTCACCACCAACAAGGGGCCGATTGCCTTGCATGCCCAGGCACTCAAGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGaa < 2:1678310/148‑1 (MQ=255) cAACCCCAAGGACGGTGAGCCGGCGGCAACCTTCTGCCGCTGGGCGCTGGAGGCGGGCAAGCACGTGGTCACCACCAACAAGGGGCCGATTGCCTTGCATGCCCAGGCACTCAAGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGAATa > 1:1063493/1‑150 (MQ=255) cccAAGGACGGTGAGCCGGCGGCAACCTTCTGCCGCTGGGCGCTGGAGGCGGGCAAGCACGTGGTCACCACCAACAAGGGGCAGCTCGGTTTGCTGGACGAGGCGCTCAAGGCCTTGGCTCAGGCCAACAATGTGTCGTTCGAATACGaa > 1:2090122/1‑150 (MQ=255) ccAAGGACGGTGAGCCGGCGGCAACCTTCTGCCGCTGGGCGCTGGAGGCGGGCAAGCACGTGGTCACCACCAACAAGGGGCCGATTGCCTTGCATGCCCAGGCACTCAAGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAg < 1:109993/150‑1 (MQ=255) ccAAGGACGGTGAGCCGGCGGCAACCTTCTGCCGCTGGGCGCTGGAGGCGGGCAAGCACGTGGTCACCACCAACAAGGGGCCGATTGCCCTGCATGCCGAGGCACTCAAGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAg < 2:214323/150‑1 (MQ=255) ccAAGGACGGTGAGCCGGCGGCAACCTTCTGCCGCTGGGCGCCGGAGGCGGGCAAGTACGGGGTCACCACCAACAAGGGGCCGATTGCCTTGCATGCCCAGGCACTCAAGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAg > 1:1253335/1‑150 (MQ=255) cAAGGACGGTGAGCCGGCGGCAACCTTCTGCCGCTGGGCGCTGGAGGCGGGCAAGCACGTGGTCACCACCAACAAGGGGCCGATTGCCTTGCATGCCCAGGCACTCAAGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAgg > 2:1439012/1‑150 (MQ=255) cAAGGACGGTGAGCCGGCGGCAACCTTCTGCCGCTGGGCGCTGGAGGCGGGCAAGCACGTGGTCACCACCAACAAGGGGCCGATTGCCTTGCATGCCCAGGCACTCAAGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAgg > 1:1965988/1‑150 (MQ=255) aaGGACGGTGAGCCGGCGGCAACCTTCTGCCGCTGGGCGCTGGAGGCGGGCAAGCACGTGGTCACCACCAACAAGGGGCCGATTGCCTTGCATGCCCAGGCACTCAAGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAGgc < 1:1728094/150‑1 (MQ=255) ggTGAGCCGGCGGCAACCTTCTGCCGCTGGGCGCTGGAGGCGGGCAAGCACGTGGTCACCACCAACAAGGGGCCGATTGCCTTGCATGCCCAGGCACTCAAGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTc > 2:2047640/1‑150 (MQ=255) ggTGAGCCGGCGGCAACCTTCTGCCGCTGGGCGCTGGAGGCGGGCAAGCACGTGGTCACCACCAACAAGGGGCCGATTGCCTTGCATGCCCAGGCACTCAAGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTc < 1:1366886/150‑1 (MQ=255) gCCGGCGGCAACCTTCTGCCGCTGGGCGCTGGAGGCGGGCAAGCACGTGGTCACCACCAACAAGGGGCCGATTGCCTTGCATGCCCAGGCACTCAAGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTCATGAg < 1:721661/150‑1 (MQ=255) gCCGGCGGCAACCTTCTGCCGCTGGGCGCGGGAGGCGGGCAAGCACGTGGTCACCACCAACAAGGGGCCGATTGCCTTGCATGCCCAGGCACTCAAGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTCATGAg > 1:1529736/1‑150 (MQ=255) ggccggcAACCTTCTGCCGCTGGGCGCTGGAGGCGGGCAAGCACGTGGTCACCACCAACAAGGGGCCGATTGCCTTGCATGCCCAGGCACTCAAGGACTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTCATGAGCg > 1:2269215/4‑150 (MQ=255) aCCTTCTGCCGCTGGGCGCTGGAGGCGGGCAAGCACGTGGTCACCACCAACAAGGGGCCGATTGCCTTGCATGCCCAGGCACTCAAGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTCATGAGCGGCACACCg < 2:1755640/150‑1 (MQ=255) ccGCTGGGCGCTGGAGGCGGGCAAGCACGTGGTCACCACCAACAAGGGGCCGATTGCCTTGCATGCCCAGGCACTCAAGGCCTTGACTAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTCATGAGCGGCACACCGGTGCTGCg > 1:1804307/1‑150 (MQ=255) gCTGGGCGCTGGAGGCGGGCAAGCACGTGGTCACCACCAACAAGGGGCCGATTGCCTTGCATGCCCAGGCACTCAAGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTCATGAGCGGCACACCGGTGCTGCGTa < 2:1965988/150‑1 (MQ=255) ggCGCTGGAGGCGGGCAAGCACGTGGTCACCACCAACAAGGGGCCGATTGCCTTGCATGCCCAGGCACTCAAGGCCTTAGCCAAGGccttga < 1:1739337/92‑5 (MQ=255) ggCGCTGGAGGCGGGCAAGCACGTGGTCACCACCAACAAGGGGCCGATTGCCTTGCATGCCCAGGCACTCAAGGCCTTAGCCAAGGccttga > 2:1739337/1‑88 (MQ=255) cgcTGGAGGCGGGCAAGCACGTGGTCACCACCAACAAGGGGCCGATTGCCTTGCATGCCCAGGCACTCAAGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTCATGAGCGGCACACCGGTGCTGCGTATGgcgc < 2:1458214/150‑1 (MQ=255) cTGGAGGCGGGCAAGCACGTGGTAACCACCAAAAAGTGGCCGATTGTCTTGCATGCCCAGGCACTCAAGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTCATGAGCGGCACACCGGTGCTGCGTATGgcgcgc < 1:2338717/150‑1 (MQ=255) gggCAAGCACGTGGTCACCACCAACAAGGGGCCGATTGCCTTGCATGCCCAGGCACTCAAGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTCATGAGCGGCACACCGGTGCTGCGTATGGCGCGCCAGACC‑‑Ct > 2:1252898/1‑150 (MQ=255) gCAAGCACGTGGTCACCACCAACAAGGGGCCGATTGCCTTGCATGCCCAGGCACTCAAGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTCATGAGCGGCACACCGGTGCTGCGTATGGCGCGCCAGACC‑‑CTgg > 2:2247624/1‑150 (MQ=255) cAAGCACGTGGTCACCACCAACAAGGGGCCGATTGCCTTGCATGCCCAGGCACTCAAGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTCATGAGCGGCACACCGGTGCTGCGTATGGCGCGCCAGACC‑‑CTggc < 1:2116641/150‑1 (MQ=255) aaGCACGTGGTCACCACCAACAAGGGGCCGATTGCCTTGCATGCCCAGGCACTCAAGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTCATGAGCGGCACACCGGTGCTGCGTATGGCGCGCCAGAc > 2:1413600/1‑143 (MQ=255) aaGCACGTGGTCACCACCAACAAGGGGCCGATTGCCTTGCATGCCCAGGCACTCAAGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTCATGAGCGGCACACCGGTGCTGCGTATGGCGCGCCAGAc < 1:1413600/143‑1 (MQ=255) aGCACGTGGTCACCACCAACAAGGGGCCGATTGCCTTGCATGCCCAGGCACTCAAGGCTTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTCATGAGCGGCACACCGGTGCTGCGTATGGCGCGCCAGACC‑‑CTggcgg < 1:826554/150‑1 (MQ=255) aGCACGTGGTCACCACCAACAAGGGGCCGATTGCCTTGCATGCCCAGGCACTCAAGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTCATGAGCGGCACACCGGTGCTGCGTATGGCGCGCCAGACC‑‑CTggcgg > 1:1013817/1‑150 (MQ=255) gCACGTGGTCACCACCAACAAGGGGCCGATTGCCTTGCATGCCCAGGCACTCAAGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTCATGAGCGGCACACCGGTGCTGCGTATGGCGCGCCAGACC‑‑CTggcggg > 1:764240/1‑150 (MQ=255) gCACGTGGTCACCACCAACAAGGGGCCGATTGCCTTGCATGCCCAGGCACTCAAGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTCATGAGCGGCACACCGGTGCTGCGTATGGCGCGCCAGACC‑‑CTggcggg > 1:765306/1‑150 (MQ=255) cACGTGGTCACCACCAACAAGGGGCCGATTGCCTTGCATGCCCAGGCACTCAAGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGGCATGAGCGGCACACCGGTGCTGCGTATGGCGCGCCAGACC‑‑CTggcgggc < 1:62229/150‑1 (MQ=255) gTGGTCACCACCAACAAGGGGCCGATTGCCTTGCATGCCCAGGCACTCAAGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTCATGAGCGGCACACCgg > 2:1909607/1‑115 (MQ=255) gTGGTCACCACCAACAAGGGGCCGATTGCCTTGCATGCCCAGGCACTCAAGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTCATGAGCGGCACACCgg < 1:1909607/115‑1 (MQ=255) gTGGTCACCACCAACAAGGGGCCGATTGCCTTGCATGCCCAGGCACTCAAGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTCATGAGCGGCACACCGGTGCTGCGTATGGCGCGCCAGACC‑‑CTGgcgggcgcg > 1:1216520/1‑150 (MQ=255) ggTCACCACCAACAAGGGGCCGATTGCCTTGCATGCCCAGGCACTCAAGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTCATGAGCGGCACACCGGTGCTGCGTATGGCGCGCCAGACC‑‑Ct < 2:1781275/138‑1 (MQ=255) ggTCACCACCAACAAGGGGCCGATTGCCTTGCATGCCCAGGCACTCAAGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTCATGAGCGGCACACCGGTGCTGCGTATGGCGCGCCAGACC‑‑Ct > 1:1781275/1‑138 (MQ=255) gTCACCACCAACAAGGGGCCGATTGCCTTGCATGCCCAGGCACTCAAGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTCATGAGCGGCACACCGGTGCTGCGTATGGCGCGCCAGACC‑‑CTGgcgggcgcgggc > 2:16105/1‑150 (MQ=255) tCACCACCAACAAGGGGCCGATTGCCTTGCATGCCCAGGCACTCAAGGCGTTGGCTAAGGACAACAATGTGTCGTTCGCATACGAAGGCACCGTAATGAGCGGCACACCGGTGCTGCGTATGGCGCGCCAGACC‑‑CTGGCGGGCGCGGGCt > 2:494514/1‑150 (MQ=255) caccacCAACAAGGGGCCGATTGCCTTGCATGCCCAGGCACTCAAGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTCATGAGCGGCACACCGGTGCTGCGTATGGCGCGCCAGACC‑‑CTGGCGGGCGCGGGCtt < 2:475114/150‑1 (MQ=255) ccaccaACAAGGGGCCGATTGCCTTGCATGCCCAGGCACTCAAGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTCATGAGCGGCACACCGGTGCTGCGTATGGCGCGCCAGACC‑‑CTGGCGGGCGCGGGCTTgg > 1:1361880/1‑150 (MQ=255) ccaACAAGGGGCCGATTGCCTTGCATGCCCAGGCACTCAAGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTCATGAGCGGCACACCGGTGCTGCGTATGGCGCGCCAGACC‑‑CTGGCGGGCGCGGGCTTGGTAg < 1:2047640/150‑1 (MQ=255) aacaaGGGGCCGATTGCCTTGCATGCCCAGGCACTCAAGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTCATGAGCGGCACACCGGTGCTGCGTATGGCGCGCCAGACC‑‑CTGGCGGGCGCGGGCTTGGTAGGt < 2:2227042/150‑1 (MQ=255) aaGGGGCCGATTGCCTTGCATGCCCAGGCACTCAAGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTCATGAGCGGCACACCGGTGCTGCGTATGGCGCGCCAGACC‑‑CTGGCGGGCGCGGGCTTGGTAGGTTTc < 1:16105/150‑1 (MQ=255) ggtccGATTGCCTTGCATGCCCAGGCACTCAAGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTCATGAGCGGCACACCGGTGCTGCGTATGGCGCGCCAGACC‑‑CTGGCGGGCGCGGGCTTGGTAGGTTTCGAg < 2:1672634/147‑1 (MQ=255) gggCCGATTGCCTTGCATGCCCAGGCACTCAAGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTCATGAGCgg < 2:1936227/89‑1 (MQ=255) gggCCGATTGCCTTGCATGCCCAGGCACTCAAGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTCATGAGCgg > 1:1936227/1‑89 (MQ=255) gggCCGATTGCCTTGCATGCCCAGGCACTCAAGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTCATGAGCGGCACACCGGTGCTGCGTATGGCGCGCCAGACC‑‑CTGGCGGGCGCGGGCTTGGTAGGTTTCGAg > 2:1461059/1‑150 (MQ=255) cgagatcttGCCTTTTATTCCCAGTCACTCAAGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTCATGAGCGGCACACCGGTGCTGCGTATGGCGCGCCAGACC‑‑CTGGCGGGCGCGGGCTTGGTAGGTTTCGAg < 2:1118033/143‑1 (MQ=255) ggCCGATTGCCTTGCATGCCCAGGCACTCAAGGCCTTGGCTAAGGCCCACACTGTTTCTCTCGAATACGAAGGCGCCGTCATGAGCGGCACACCGCTGGTACTTATTGCTCGCCAGACC‑‑CTGGCGGGCGCGGGCTTGGTAGGTTTCGAg‑g < 1:1252898/150‑1 (MQ=255) ggCCGATTGCCTTGCATGCCCAGGCACTCAAGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTCATGAGCGGCACACCGGTGCTGCGTATGGCGCGCCAGACC‑‑CTGGCGGGCGCGGGCTTGGTAGGTTTCGAg‑g < 2:1063493/150‑1 (MQ=255) ggCCGATTGCCTTGCATGCCCAGGCACTCAAGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTCATGAGCGGCACACCGGTGCTGCGTATGGCGCGCCAGACC‑‑CTGGCGGGCGCGGGCTTGGTAGGTTTCGAg‑g < 2:1452797/150‑1 (MQ=255) ggCCGATTGCCTTGCATGCCCAGGCACTCAAGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTCATGAGCGGCACACCGGTGCTGCGTATGGCGCGCCAGACC‑‑CTGGCGGGCGCGGGCTTGGTAGGTTTCGAg‑g < 1:1086501/150‑1 (MQ=255) gCCGAGTACCTGGCATGCCCAGGCACTCAAGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTCATGAGCGGCACACCGGTGCTGCGTATGGCGCGCCAGACC‑‑CTGGCGGGCGCGGGCTTGGTAGGTTTCGAg‑gg > 2:1902734/1‑150 (MQ=255) cGATTGCCTTGCATGCCCAGGCACTCAAGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTCATGAGCGGCACACCGGTGCTGCGTATGGCGCGCCAGACC‑‑CTGGCGGGCGCGGGCTTGGTAGGTTTCGAG‑GGCa < 2:2128626/150‑1 (MQ=255) cGATTGCCTTGCATGCCCAGGCACTCAAGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTCATGAGCGGCACACCGGTGCTGCGTATGGCGCGCCAGACC‑‑CTGGCGGGCGCGGGCTTGGTAGGTTTCGAG‑GGCa > 2:1881921/1‑150 (MQ=255) gATTGCCTTGCATGCCCAGGCACTCAAGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTCATGAGCGGCACACCGGTGCTGCGTATGGCGCGCCAGACC‑‑CTGGCGGGCGCGGGCTTGGTAGGTTTCGAG‑GGCAt > 2:1051941/1‑150 (MQ=255) gATTGCCTTGCATGCCCAGGCACTCAAGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTCATGAGCGGCACACCGGTGCTGCGTATGGCGCGCCAGACC‑‑CTGGCGGGCGCGGGCTTGGTAGGTTTCGAG‑GGCAt > 2:2011963/1‑150 (MQ=255) ttGCCTTGCATGCCCAGGCACTCAAGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTCATGAGCGGCACACCGGTGCTGCGTATGGCGCGCCAGACC‑‑CTGGCGGGCGCGGGCTTGGTAGGTTTCGAG‑GGCATtc < 1:885971/150‑1 (MQ=255) cTTGCATGCCCAGGCACTCAAGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTCATGAGCGGCACACCGGTGCTGCGTATGGCGCGCCAGACC‑‑CTGGCGGGCGCGGGCTTGGTAGGTTTCGAG‑GGCATTCTCaa < 1:1804587/150‑1 (MQ=255) cTTGCATGCCCAGGCACTCAAGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTCATGAGCGGCACACCGGTGCTGCGTATGGCGCGCCAGACC‑‑CTGGCGGGCGCGGGCTTGGTAGGTTTCGAG‑GGCATTCTCaa < 1:1439012/150‑1 (MQ=255) cTTGCATGCCCAGGCACTCAAGGCCTTGACTAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTCATGAGCGGCACACCGGTGCTGCGTATGGCGCGCCAGACC‑‑CTGGCGGGCGCGGGCTTGGTAGGTTTCGAG‑GGCATTCTCaa < 2:1804307/150‑1 (MQ=255) gCATGCCCAGGCACTCAAGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTCATGa > 2:1853553/1‑71 (MQ=255) gCATGCCCAGGCACTCAAGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTCATGa < 1:1853553/71‑1 (MQ=255) tGCCCAGGCACTCAAGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTCATGAGCGGCACACCGGTGCTGCGTATGGCGCGCCAGACC‑‑CTGGCGGGCGCGGGCTTGGTAGGTTTCGAG‑GGCATTCTCAACGGTAc < 1:1475815/150‑1 (MQ=255) gCCCAGGCACTCAAGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTCATGAGCGGCACACCGGTGCTGCGTATGGCGCGCCAGACC‑‑CTGGCGGGCGCGGGCTTGGTAGGTTTCGAG‑GGCATTCTCAACGGTAcc > 1:339019/1‑150 (MQ=255) cAGGCACTCAAGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTCATGAGCGGCACACCGGTGCTGCGTATGGCGCGCCAGACC‑‑CTGGCGGGCGCGGGCTTGGTAGGTTTCGAg‑g < 2:1680623/130‑1 (MQ=255) cAGGCACTCAAGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTCATGAGCGGCACACCGGTGCTGCGTATGGCGCGCCAGACC‑‑CTGGCGGGCGCGGGCTTGGTAGGTTTCGAg‑g > 1:1680623/1‑130 (MQ=255) ggCAGTAAAGGTCTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTCATGAGCGGCACACCGGTGCTGCGTATGGCGCGCCAGACC‑‑CTGGCGGGCGCGGGCTTGGTAGGTTTCGAG‑GGCATTCTCAACGGTACCTCTaa < 2:1878093/150‑1 (MQ=255) ggCACTCAAGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTCATGAGCGGCACACCGGTGCTGCGTATGGCGCGCCAGACC‑‑CTGGCGGGCGCGGGCTTGGTAGGTTTCGAG‑GGCATTCTCAACGGTACCTCTaa < 1:987369/150‑1 (MQ=255) cTCAAGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTCATGAGCGGCACACCGGTGCTGCGTATg < 2:2135799/81‑1 (MQ=255) cTCAAGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTCATGAGCGGCACACCGGTGCTGCGTATg > 1:2135799/1‑81 (MQ=255) cTCAAGGCCATGGATAAGGCCAACAAGGTGGCGTTCGAATACGAAGGCGCCGTCATGAGGGGCACACCGGTGCTGCGTATGGCGCGCCAGACC‑‑CTGGCGGGCGCGGGCTTGGTAGTTTTCGAG‑GGCATTCTCAACGGTACCTCTAACTAt < 2:627617/150‑1 (MQ=255) tCAAGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTCATGa < 2:2187102/57‑1 (MQ=255) tCAAGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTCATGa > 1:2187102/1‑57 (MQ=255) ttggCCTTAGCCAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTCATGAGCGGCACACCGGTGCTGCGTATGGCGCGCCAGACC‑‑CTGGCGGGCGCGGGCTTGGTAGGTTTCGAg‑g < 2:1105155/119‑1 (MQ=255) ttggCCTTAGCCAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTCATGAGCGGCACACCGGTGCTGCGTATGGCGCGCCAGACC‑‑CTGGCGGGCGCGGGCTTGGTAGGTTTCGAg‑g > 1:1105155/3‑121 (MQ=255) aaGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTCATGAGCGGCACACCGGTGCTGCGTATGGCGCGCCAGACC‑‑CTGGCGGGCGCGGGCTTGGTAGGTTTCGAG‑GGCATTCTCAACGGTACCTCTAACTAtgtg > 2:1003354/1‑150 (MQ=255) aaGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTCATGAGCGGCACACCGGTGCTGCGTATGGCGCGCCAGACC‑‑CTGGCGGGCGCGGGCTTGGTAGGTTTCGAG‑GGCATTCTCAACGGTACCTCTAACTAtgtg > 2:826013/1‑150 (MQ=255) ccTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTCATGAGCGGCACACCGGTGCTGCGTATGGCGCGCCAGACC‑‑CTGGCGGGCGCGGGCTTGGTAGGTTTCGAg‑g < 2:1441052/117‑1 (MQ=255) ccTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTCATGAGCGGCACACCGGTGCTGCGTATGGCGCGCCAGACC‑‑CTGGCGGGCGCGGGCTTGGTAGGTTTCGAg‑g > 1:1441052/1‑117 (MQ=255) ccTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTCATGAGCGGCACACCGGTGCTGCGTATGGCGCGCCAGACC‑‑CTGGCGGGCGCGGGCTTGGTAGGTTTCGAG‑GGCATTCTCAACGGTACCTCTAACTATGTGCTCa > 1:1860978/1‑150 (MQ=255) ttGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTCATGAGCGGCACACCGGTGCTGCGTATG‑‑GCGCAAGGCCTGCAGTCGGGCGCGGGCTTGGTAGGTTTAGAGCGGAACTC‑CAACCGTACCGTGAACTATGTGCTCAcg > 1:1853676/1‑150 (MQ=255) cTAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTCATGAGCGGCACACCGGTGCTGCGTATGGCGCGCCAGACC‑‑CTGGCGGGCGCGGGCTTGGTAGGTTTCGAG‑GGCATTCTCAACGGTACCTCTAACTATGTGCTCACGCGCa > 2:1203433/1‑150 (MQ=255) tAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTCATGAGCGGCACACCGGTGCTGCGTATGGCGCGCCAGACC‑‑CTGGCGGGCGCGGGCTTGGTAGGTTTCGAG‑GGCATTCTCAACGGTACCTCTAACTATGTGCTCACGCGCAt > 2:1591929/1‑150 (MQ=255) tAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTCATGAGCGGCACACCGGTGCTGCGTATGGCGCGCCAGACC‑‑CTGGCGGGCGCGGGCTTGGTAGGTTTCGAG‑GGCATTCTCAACGGTACCTCTAACTATGTGCTCACGCGCAt < 1:1051941/150‑1 (MQ=255) | GACATCATCGCCGAGGCCACATTCACCAACCCCAAGGACGGTGAGCCGGCGGCAACCTTCTGCCGCTGGGCGCTGGAGGCGGGCAAGCACGTGGTCACCACCAACAAGGGGCCGATTGCCTTGCATGCCCAGGCACTCAAGGCCTTGGCTAAGGCCAACAATGTGTCGTTCGAATACGAAGGCGCCGTCATGAGCGGCACACCGGTGCTGCGTATGGCGCGCCAGACC‑‑CTGGCGGGCGCGGGCTTGGTAGGTTTCGAG‑GGCATTCTCAACGGTACCTCTAACTATGTGCTCACGCGCAT > NC_002947/772617‑772915 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |