| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 73,985 | G→T | 7.3% | R154L (CGC→CTC) | PP_0063 → | lipid A biosynthesis lauroyl acyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 73,985 | 0 | G | T | 7.3% | 338.4 / 10.4 | 111 | R154L (CGC→CTC) | PP_0063 | lipid A biosynthesis lauroyl acyltransferase |
| Reads supporting (aligned to +/- strand): ref base G (54/47); new base T (3/5); total (58/53) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.75e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.11e-01 | |||||||||||
Only 100 of 117 total aligned reads displayed.
GGAGCAGGCCCTGGCCTCGGGTAAAGGCGTGGTCGGCATCACCAGCCACCTGGGCAACTGGGAAGTGTTGAACCACTTCTACTGCAACCAGTGCAAACCGATCATCTTCTACCGCCCGCCGAAGCTGAAGGCGGTGGATGACCTGCTGCGCGAGCAGCGCGTGCAGATGGGCAATCGCGTGGCACCGTCGACCAAGGAAGGCATCCTCAGCGTGATCAAGGAAGTGCGCCGTGGTGGCCAGGTGGGTATTCCTGCCGACCCGGAGCCGGCGGAATCGGCGGGCGTGTTCGTACCGTTC > NC_002947/73836‑74133 | ggAGCAGGCCCTGGCCTCGGGTAAAGGCGTGGTCGGCATCACCAGCCACCTGGGCAACTGGGAAGTGTTGAACCACTTCTACTGCAACCAGTGCAAACCGATCATCTTCTACCGCCCGCCGAAGCTGAAGGCGGTGGATGACCTGCTgcg > 1:1093982/1‑150 (MQ=255) gAGCAGGCCCTGGTCTCGGGTAAAGGCGTGGTCGGCATCCCCAGCCACCTGGGCAACTGGGAAGTGTTGAACCACTTCTACTGCAACCAGTGCAAACCGATCATCTTCTACCGCCCGCCGAAGCTGAAGGCGGTGGATGACCTGCTgcgc < 1:136682/150‑1 (MQ=255) gAGCAGGCCCTGGCCTCGGGTAAAGGCGTGGTCGGCATCACCAGCCACCTGGGCACCTGGGAAGGGTAGAACCACTTCTACTGCAACCAGTGCAAACCGATCATCTTCTACCGCCCGCCGAAGCTGAAGGCGGTGGATGACCTGCTgcgc < 2:453348/150‑1 (MQ=255) cTGGCCTCGGGTAAAGGCGTGGTCGGCATCACCAGCCACCTGGGCAACTGGGAAGTGTTGAACCACTTCTACTGCAACCAGTGCAAACCGATCATCTTCTACCGCCCGCCGCAGCTGAAGGCGGTGGATGACCTGCTGCGCGAGCAgcgc < 2:1395713/150‑1 (MQ=255) cTGGCCTCGGGTAAAGGCGTGGTCGGCATCACCAGCCACCTGGGCAACTGGGAAGTGTTGAACCACTTCTACTGCAACCAGTGCAAACCGATCATCTTCTACCGCCCGCCGAAGCTGAAGGCGGTGGATGACCTGCTGCTCGcgcagcag < 1:650918/150‑3 (MQ=255) cTCGGGTAAAGGCGTGGTCGGCATCACCAGCCACCTGGGCAACTGGGAAGTGTTGAACCACTTCTACTGCAACCAGTGCAAACCGATCATCTTCTACCGCCCGCCGAAGCTGAAGGCGGTGGATGACCTGCTGCTCGcgcagcag > 2:94729/1‑143 (MQ=255) gTAAAGGCGTGGTCGGCATCACCAGCCACCTGGGCAACTGGGAAGTGTTGAACCACTTCTACTGCAACCAGTGCAAACCGATCATCTTCTACCGCCCGCCGAAGCTGAAGGCGGTGGATGACCTGCTGCGCGAGCAGCGCGTGCAGATgg < 2:1093982/150‑1 (MQ=255) gTAAAGGCGTGGTCGGCATCACCAGCCACCTGGGCAACTGGGAAGTGTTGAACCACTTCTACTGCAACCAGTGCAAACCGATCATCTTCTACCGCCCGCCGAAGCTGAAGGCGGTGGATGACCTGCTGCGCGAGCAGAGAGTGCAGATgg > 1:1911002/1‑150 (MQ=255) tAAAGGCGTGGTCGGCATCACCAGCCACCTGGGCAACTGGGAAGTGTTGAACCACTTCTACTGCAACCAGTGCAAACCGATCATCTTCTACCGCCCGCCGAAGCTGAAGGCGGTGGATGACCTGCTGCTCGcgcagcag > 2:1884648/1‑137 (MQ=255) tAAAGGCGTGGTCGGCATCACCAGCCACCTGGGCAACTGGGAAGTGTTGAACCACTTCTACTGCAACCAGTGCAAACCGATCATCTTCTACCGCCCGCCGAAGCTGAAGGCGGTGGATGACCTGCTGCTCGcgcagcag < 1:1884648/139‑3 (MQ=255) aGGCGTGGTCGGCATCACCAGCCACCT‑GGCAAATGGGAAGGGTTGAACCAATTCTACTGCAAACAGGGCATAACGATTATCTTCTTACGCCCGCCGAAGCTGAAGGCGGTGGATGACCTGCCGCGGGAGCAGCCCCGGCAGATGGGCAAt > 2:714156/1‑150 (MQ=255) gCGTGGTCGGCATCACCAGCCACCTGGGCAACTGGGAAGTGTTGAACCACTTCTACTGCAACCAGTGCAAACCGATCATCTTCTACCGCCCGCCGAAGCTGAAGGCGGTGGATGACCTGCTGCTCGcgcagcag > 2:2259078/1‑132 (MQ=255) gCGTGGTCGGCATCACCAGCCACCTGGGCAACTGGGAAGTGTTGAACCACTTCTACTGCAACCAGTGCAAACCGATCATCTTCTACCGCCCGCCGAAGCTGAAGGCGGTGGATGACCTGCTGCTCGcgcagcag < 1:2259078/134‑3 (MQ=255) gTGGTCGGCATCACCAGCCACCTGGGCAACTGGGAAGTGTTGAACCACTTCTACTGCAACCAGTGCAAACCGATCATCTTCTACCGCCCGCCGAAGCTGAAGGCGGTGGATGACCTGCTGCGCGAGCAGCGCGTGCAGATGGGCAATcgc < 2:1545439/150‑1 (MQ=255) gTCGGCATCACCAGCCACCTGGGCAACTGGGAAGTGTTGAACCACTTCTACTGCAACCAGTGCAAACCGATCATCTTCTACCGCCCGCCGAAGCTGAAGGCGGTGGATGACCTGCTGCGCGAGCAGCGCGTGCAGATGGGCAATCGCGTg > 2:1523652/1‑150 (MQ=255) tCGGCATCACCAGCCACCTGGGAAACAGGGAAGTGTTGAACCACTTCTACTGCAACCAGTGCAAACCGATCATCTTCTACCGCCCGCCGAAGCTGAAGGCGGTGGATGACCTGCTGCGCGAGCAGCGCGTGCAGATGGGCAATCGCGTgg > 1:2288822/1‑150 (MQ=255) tCACCAGCCACCTGGGCAACTGGGAAGTGTTGAACCACTTCTACTGCAACCAGTGCAAACCGATCATCTTCTACCGCCCGCCGAAGCTGAAGGCGGTGGATGACCTGCTGCGCGAGCAGCGCGt < 2:1684339/124‑1 (MQ=255) tCACCAGCCACCTGGGCAACTGGGAAGTGTTGAACCACTTCTACTGCAACCAGTGCAAACCGATCATCTTCTACCGCCCGCCGAAGCTGAAGGCGGTGGATGACCTGCTGCGCGAGCAGCGCGt > 1:1684339/1‑124 (MQ=255) ccAGCCACCTGGGCAACTGGGAAGTGTTGAACCACTTCTACTGCAACCAGTGCAAACCGATCATCTTCTACCGCCCGCCGAAGCTGAAGGCGGTGGATGACCTGCTGCGCGAGCAGCGCGTGCAGATGGGCAATCGCGTGGCACCGTCGa > 2:589047/1‑150 (MQ=255) cAGCCACCTGGGCAACTGGCAAGTGTTGAACCACTTCTACTGCAACCAGTGCAAACCGATCATCTTCTACCGCCCGCCGAAGCTGAAGGCGGTGGATGACCTGCTGCGCGAGCAGCGCGTGAAGATGGGCAATCGCGTGGCACCGTCGAc < 2:1586958/150‑1 (MQ=255) gCCACCTGGGCAACTGGGAAGTGTTGAACCACTTCTACTGCAACCAGTGCAAACCGATCATCTTCTACCGCCCGCCGAAGCTGAAGGCGGTGGATGACCTGCTGCGCGAGCAGCGCGTGCAGATGGGCAATCGCGt < 2:335449/136‑1 (MQ=255) gCCACCTGGGCAACTGGGAAGTGTTGAACCACTTCTACTGCAACCAGTGCAAACCGATCATCTTCTACCGCCCGCCGAAGCTGAAGGCGGTGGATGACCTGCTGCGCGAGCAGCGCGTGCAGATGGGCAATCGCGt > 1:335449/1‑136 (MQ=255) gCCACCTGGGCAACTGGGAAGTGTTGAACCACTTCTACTGCAACCAGTGCAAACCGATCATCTTCTACCGCCCGCCGAAGCTGAAGGCGGTGGATGACCTGCTGCGCGAGCAGCGCGTGCAGATGGGCAATCGCGTGGCACCGTCGACCa > 2:1375869/1‑150 (MQ=255) cACCTGGGCAACTGGGAAGTGTTGAACCACTTCTACTGCAACCAGTGCAAACCGATCATCTTCTACCGCCCGCCGAAGCTGAAGGCGGTGGATGACCTGCTGCGCGAGCAGCGCGTGCAGATGGGCAATCGCGTGGCACCGTCGACCaag < 2:2296726/150‑1 (MQ=255) cTGGGCAACTGGGAAGTGTTGAACCACTTCTACTGCAACCAGTGCAAACCGATCATCTTCTACCGCCCGCCGAAGCTGAAGGCGGTGGATGACCTGGTGCGCGAGCAGCGCGTGCAGATGGGCAATCGCGTGGCACCGTCGACCaaggaa < 2:2151405/150‑1 (MQ=255) cTGGGCAACTGGGAAGTGTTGAACCACTTCTACTGCAACCAGTGCAAACCGATCATCTTCTACCGCCCGCCGAAGCTGAAGGCGGTGGATGACCTGCTGCGCGAGCAGCGCGTGCAGATGGGCAATCGCGTGGCACCGTCGACCaaggaa < 2:851964/150‑1 (MQ=255) cTGGGCAACTGGGAAGTGTTGAACCACTTCTACTGCAACCAGTGCAAACCGATCATCTTCTACCGCCCGCCGAAGCTGAAGGCGGTGGATGACCTGCTGCGCGAGCAGCGCGTGCAGATGGGCAATCGCGTGGCACCGTCGACCaaggaa < 2:514911/150‑1 (MQ=255) atGGACAACTGGGTAGTGTTGAACCACTTCTACTGCAACCAGTGCAAACTGATCCATTAGCGCCGCCCGCCGAAGCTGAAGGCGGTGGATGACCTGCTGCGCGAGCAGCGCGTGCAGATGGGCAATCGCGTGGCACCGTCGACCaaggaa < 2:2372693/149‑1 (MQ=255) cAACTGGGAAGTGTTGAACCACTTCTACTGCAACCAGTGCAAACCGATCATCTTCTACCGCCCGCCGAAGCTGAAGGCGGTGGATGACCTGCTGCGCGAGCAGCGCGTGCAGATGGGCAATCGCGTGGCACCGTCGACCAAGGAAGGCAt > 2:295874/1‑150 (MQ=255) aaCTGGGAAGTGTTGAACCACTTCTACTGCAACCAGTGCAAACCGATCATCTTCTACCGCCCGCCGAAGCTGAAGGCGGTGGATGACCTGCTGCGCGAGCAGCGCGTGCAGATGGGCAATCGCGTGGCACCGTCGACCAAGGAAGGc > 2:447752/1‑147 (MQ=255) aaCTGGGAAGTGTTGAACCACTTCTACTGCAACCAGTGCAAACCGATCATCTTCTACCGCCCGCCGAAGCTGAAGGCGGTGGATGACCTGCTGCGCGAGCAGCGCGTGCAGATGGGCAATCGCGTGGCACCGTCGACCAAGGAAGGc < 1:447752/147‑1 (MQ=255) aaCCGGGAAGTGTTGAACCACTTCTACTGCAACCAGTGCAAACCGATCATCTTCTACCGCCCGACGAAGCTGAAGGCGGTGGATGACCTGCTGCGCGAGCAGCGCGTGCAGATGGGCAATCGCGTGGCAACGTCGACCAAGGAAGGCATc > 1:868293/1‑150 (MQ=255) cTGGGAAGTGTTGAACCACTTCTACTGCAACCAGTGCAAACCGATCATCTTCTACCGCCCGCCGAAGCTGAAGGCGGTGGATGACCTGCTGCGCGAGCAGCGCGTGCAGATGGGCAATCGCGTGGCACCGTCGACCAAGGAAGGCATCCt > 2:1022641/1‑150 (MQ=255) tGGGAAGTGTTGAACCACTTCTACTGCAACCAGTGCAAACCGATCATCTTCTACCGCCCGCCGAAGCTGAAGGCGGTGGATGACCTGCTGCGCGAGCAGCGCGTGCAGATGGGCAATCGCGTGGCACCGTCGACCaaggaa < 2:628624/141‑1 (MQ=255) tGGGAAGTGTTGAACCACTTCTACTGCAACCAGTGCAAACCGATCATCTTCTACCGCCCGCCGAAGCTGAAGGCGGTGGATGACCTGCTGCGCGAGCAGCGCGTGCAGATGGGCAATCGCGTGGCACCGTCGACCaaggaa > 1:628624/1‑141 (MQ=255) ggAAGTGTTGAACCACTTCTACTGCAACCAGTGCAAACCGATCATCTTCTACCGCCCGCCGAAGCTGAAGGCGGTGGATGACCTGCTGCGCGAGCAGCGCGTGCAGATGGGCAATCGCGTGGCACCGTCGACCAAGGAAGGCATCCTCAg > 1:1188117/1‑150 (MQ=255) aGTGTTGAACCACTTCTACTGCAACCAGTGCAAACCGATCATCTTCTACCGCCCGCCGAAGCTGAAGGCGGTGGATGACCTGCTGCGCGAGCAGCGCGTGCAGATGGGCAATCGCGTGGCACCGTCGACCAAGGAAGGCATCCTCAGCGt < 1:345201/150‑1 (MQ=255) tgtTGAACCACTTCTACTGCAACCAGTGCAAACCGATCATCTTCTACCGCCCGCCGAAGCTGAAGGCGGTGGATGACCTGCTGCGCGAGCAGCGCGTGCAGATGGGCAATCGCGTGGCACCGTCGACCAAGGAAGGCATCCTCAGCGTGa < 1:929444/150‑1 (MQ=255) ttGAACCACTTCTACTGCAACCAGTGCAAACCGATCATCTTCTACCGCCCGCCGAAGCTGAAGGCGGTGGATGACCTGCTGCGCGAGCAGCGCGTGCAGATGGGCAATCGCGTGGCACCGTCGACCaaggaagg > 1:21393/1‑134 (MQ=255) ttGAACCACTTCTACTGCAACCAGTGCAAACCGATCATCTTCTACCGCCCGCCGAAGCTGAAGGCGGTGGATGACCTGCTGCGCGAGCAGCGCGTGCAGATGGGCAATCGCGTGGCACCGTCGACCaaggaagg < 2:21393/134‑1 (MQ=255) aaCCACTTCTACTGCAACCAGTGCAAACCGATCATCTTCTACCGCCCGCCGAAGCTGAAGGCGGTGGATGACCTGCTGCGCGAGCAGCGCGTGCAGATGGGCAATCGCGTGGCACCGTCGACCaaggaag > 2:1156182/1‑130 (MQ=255) aaCCACTTCTACTGCAACCAGTGCAAACCGATCATCTTCTACCGCCCGCCGAAGCTGAAGGCGGTGGATGACCTGCTGCGCGAGCAGCGCGTGCAGATGGGCAATCGCGTGGCACCGTCGACCaaggaag < 1:1156182/130‑1 (MQ=255) aaCCACTTCTACTGCAACCAGTGCAAACCGATCATCTTCTACCGCCCGCCGAAGCTGAAGGCGGTGGATGACCTGCTGCGCGAGCAGCGCGTGCAGATGGGCAATCGCGTGGCACCGTCGACCAAGGAAGGCATCCTCAGCGTGATCAAg < 2:423507/150‑1 (MQ=255) aCCACTTCTACTGCAACCAGTGCAAACCGATCATCTTCTACCGCCCGCCGAAGCTGAAGGCGGTGGATGACCTGCTGCGCGAGCAGCGCGTGCAGATGGGCAATCGCGTGGCACCGTCGa > 1:354060/1‑120 (MQ=255) aCCACTTCTACTGCAACCAGTGCAAACCGATCATCTTCTACCGCCCGCCGAAGCTGAAGGCGGTGGATGACCTGCTGCGCGAGCAGCGCGTGCAGATGGGCAATCGCGTGGCACCGTCGa < 2:354060/120‑1 (MQ=255) aCTTCTACTGCAACCAGTGCAAACCGATCATCTTCTACCGCCCGCCGAAGCTGAAGGCGGTGGATGACCTGCTGCGCGAGCAGCGCGTGCAGATGGGCAATCGCGTGGCACCGTCGACCAAGGAAGGCATCCTCAGCGTGATCAAGGAAg > 1:2030169/1‑150 (MQ=255) cTTCTACTGCAACCAGTGCAAACCGATCATCTTCTACCGCCCGCCGAAGCTGAAGGCGGTGGATGACCTGCTGCGCGAGCAGCGCGTGCAGATGGGCAATCGCGTGGCACCGTCGACCAAGGAAGGCATCCTCAGCGTGATCAAGGAAGt > 2:1678838/1‑150 (MQ=255) tACTGCAACCAGTGCAAACCGATCATCTTCTACCGCCCGCCGAAGCTGAAGGCGGTGGATGACCTGCTGCGCGAGCAGCGCGTGCAGATGGGCAATCGCGTGGCACCGTCGACCAAGGAAGGc > 2:1816561/1‑123 (MQ=255) tACTGCAACCAGTGCAAACCGATCATCTTCTACCGCCCGCCGAAGCTGAAGGCGGTGGATGACCTGCTGCGCGAGCAGCGCGTGCAGATGGGCAATCGCGTGGCACCGTCGACCAAGGAAGGc < 1:1816561/123‑1 (MQ=255) aCTGCAACCAGTGCAAACCGATCATCTTCTACCGCCCGCCGAAGCTGAAGGCGGTGGATGACCTGCTGCACGAGCAGCGCGTGCAGATGGGCAATCGCGTGGCACCGTCGACCAAGGAAGGCATCCTCa > 1:2267008/1‑129 (MQ=255) tGCAACCAGTGCAAACCGATCATCTTCTACCGCCCGCCGAAGCTGAAGGCGGTGGATGACCTGCTGCGCGAGCAGCGCGTGCAGATGGGCAATCGCGTGGCACCGTCGACCAAGGAAGGCATCCTCAGCGTGATCAAGGAAGTg > 2:1586762/1‑144 (MQ=255) tGCAACCAGTGCAAACCGATCATCTTCTACCGCCCGCCGAAGCTGAAGGCGGTGGATGACCTGCTGCGCGAGCAGCGCGTGCAGATGGGCAATCGCGTGGCACCGTCGACCAAGGAAGGCATCCTCAGCGTGATCAAGGAAGTg < 1:1586762/144‑1 (MQ=255) tGCAACCAGTGCAAACCGATCATCTTCTACCGCCCGCCGAAGCTGAAGGCGGTGGATGACCTGCTGCGCGAGCAGCGCGTGCAGATGGGCAATCGCGTGGCACCGTCGACCAAGGAAGGCATCCTCAGCGTGATCAAGGAAGTGCGCCgt > 2:1018312/1‑150 (MQ=255) gCAACCAGTGCAAACCGATCATCTTCTACCGCCCGCCGAAGCTGAAGGCGGTGGATGACCTGCTGCGCGAGCAGCGCGTGCAGATGGGCAATCGCGTGGCACCGTCGACCAAGGAAGGCATCCTCAGCGTGATCAAGGAAGTGCGCCgtg > 2:2385585/1‑150 (MQ=255) ccAGTGCAAACCGATCATCTTCTACCGGCCGCCGAAGCTGAAGGCGGTGGATGACCAGCTGCGCGAGCAGCGCGGGGAGATGTGGATGGGCGTGGCACCGTCGACCAAGGAAGGGATCCTCAGTGTGATAAAGGAAGTGCGCCGtggtgg > 1:899251/1‑150 (MQ=255) ccAGTGCAAACCGATCATCTTCTACCGCCCGCCGAAGCTGAAGGCGGTGGATGACCTGCTGCGCGAGCAGCGCGTGCAGATGGGCAATCGCGTGGCACCGTCGACCAAGGAAGGCATCCTCAGCGTGATCAAGGAAGTGCGCCGtggtgg > 1:1094486/1‑150 (MQ=255) cAGTGCAAACCGATCATCTTCTACCGCCCGCCGAAGCTGAAGGCGGTGGAGGACCTGCTGCGCGAGCAGCGCGTGCAGATGGGCAATCGCGTGGCACCGTCGACCAAGGAAGGCATCCTCAGCGTGATCAAGGAAGTGCGCCGTGGTGGc > 1:1384326/1‑150 (MQ=255) aGTGCAAACCGATCATCTTCTACCGCCCGCCGAAGCTGAAGGCGGTGGATGACCTGCTGCGCGAGCAGCGCGTGCAGATGGGCAATCGCGTGGCACCGTCGACCAAGGAAGGCATCCTCAGCGTGATCAAGGAAGTGCGCCGTGGTGGcc > 1:203982/1‑150 (MQ=255) cAAACCGATCATCTTCTACCGCCCGCCGAAGCTGAAGGCGGTGGATGACCTGCTGCGCGAGCAGCGCGTGCAGATGGGCAATCGCGTGGCACCGTCGACCAAGGAAGGCATCCTCAGCGTGATCAAGGAAGTGCGCCGTGGTGGCCAGGt < 1:729380/150‑1 (MQ=255) aaaCCGATCATCTTCTACCGCCCGCCGAAGCTGAAGGCGGTGGATGACCTGCTGCGCGagca > 2:1195137/1‑62 (MQ=255) aaaCCGATCATCTTCTACCGCCCGCCGAAGCTGAAGGCGGTGGATGACCTGCTGCGCGagca < 1:1195137/62‑1 (MQ=255) aaaCCGATCATCTTCTACCGCCCGCCGAAGCTGAAGGCGGTGGATGACCTGCTGCGCGAGCAGCGCGTGCAGATGGGCAATCGCGTGGCACCGTCGACCAAGGAAGGCATCCTCAGCGTGATCAAGGAAGTGCGCCGTGGTGGCCAGGTg > 2:1526993/1‑150 (MQ=255) aaCCGATCATCTTCTACCGCCCGCCGAAGCTGAAGGCGGTGGATGACCTGCTGCGCGAGCAGCGCGTGCAGATGGGCAATCGCGTGGCACCGTCGACCAAGGAAGGCATCCTCAGCGTGATCAAGGAAGTGCGCCGTGGTGGCCAGGTgg < 2:865357/150‑1 (MQ=255) ccGATCATCTTCTACCGCCCGCCGAAGCTGAAGGCGGTGGATGACCTGCTGCGCGAGCAGCGCGTGCAGATGGGCAATCGCGTGGCACCGTCGACCAAGGAAGGCATCCTCAGCGTGATCAAGGAAGt > 1:1754102/1‑128 (MQ=255) ccGATCATCTTCTACCGCCCGCCGAAGCTGAAGGCGGTGGATGACCTGCTGCGCGAGCAGCGCGTGCAGATGGGCAATCGCGTGGCACCGTCGACCAAGGAAGGCATCCTCAGCGTGATCAAGGAAGTGCGCCGTGGTGGCCAGGTGGGt < 2:2232475/150‑1 (MQ=255) atcatcTTCTACCGCCCGCCGAAGCTGAAGGCGGTGGATGACCTGCTGCGCGAGCAGCGCGTGCAGATGGGCAATCGCGTGGCACCGTCGACCAAGGAAGGCATCCTCAGCGTGATCAAGGAAGTGCGCCGTGGTGGCCAGGTGGGTAtt > 1:1858759/1‑150 (MQ=255) tcttctACCGCCCGCCGAAGCTGAAGGCGGTGGATGACCTGCTGCGCGAGCAGCGCGTGCAGATGGGCAATCGCGTGGCACCGTCGACCAAGGAAGGCATCCTCAGCGTGATCAAGGAAGTGCGCCGTGGTGGCCAGGTGGGTATTCCTg > 2:2183229/1‑150 (MQ=255) cttctACCGCCCGCCGAAGCTGAAGGCGGTGGATGACCTGCTGCGCGAGCAGCGCGTGCAGATGGGCAATCGCGTGGCACCGTCGACCAAGGAAGGCATCCTCAGCGTGATCAAGGAAGTGCGCCGTGGTGGCCAGGTGGGTATTCCTGc < 1:1827688/150‑1 (MQ=255) cttctACCGCCCGCCGAAGCTGAAGGCGGTGGATGACCTGCTGCGCGAGCAGCGCGTGCAGATGGGCAATCGCGTGGCACCGTCGACCAAGGAAGGCATCCTCAGCGTGATCAAGGAAGTGCGCCGTGGTGGCCAGGTGGGTATTCCTGc > 1:188747/1‑150 (MQ=255) ttctACCGCCCGCCGAAGCTGAAGGCGGTGGATGACCTGCTGCGCGAGCAGCGCGTGCAGATGGGCAATCGCGTGGCACCGTCGACCAAGGAAGGCATCCTCAGCGTGATCAAGGAAGTGCGCCGTGGTGGc > 1:1448758/1‑132 (MQ=255) ttctACCGCCCGCCGAAGCTGAAGGCGGTGGATGACCTGCTGCGCGAGCAGCGCGTGCAGATGGGCAATCGCGTGGCACCGTCGACCAAGGAAGGCATCCTCAGCGTGATCAAGGAAGTGCGCCGTGGTGGc < 2:1448758/132‑1 (MQ=255) ccgcccgcCGAAGCTGAAGGCGGTGGATGACCTGCTGCGCGAGCAGCGCGTGCAGATGGGCAATCGCGTGGCACCGTCGACCAAGGAAGGCATCCTCAGCGTGATCAAGGAAGTGCGCCGTGGTGGCCAGGTGGGTATTCCTGCCGAccc > 1:1327544/1‑150 (MQ=255) ccgcccgcCGAAGCTGAAGGCGGTGGATGACCTGCTGCGCGAGCAGCGCGTGCAGATGGGCAATCGCGTGGCACCGTCGACCAAGGAAGGCATCCTCAGCGTGATCAAGGAAGTGCGCCGTGGTGGCCAGGTGGGTATTCCTGCCGAccc > 1:1802517/1‑150 (MQ=255) ccgcccgcCGAAGCTGAAGGCGGTGGATGACCTGCTGCGCGAGCAGCGCGTGCAGATGGGCAATCGCGTGGCACCGTCGACCAAGGAAGGCATCCTCAGCGTGATCAAGGAAGTGCGCCGTGGTGGCCAGGTGGGTATTCCTGCCGAccc > 1:719413/1‑150 (MQ=255) gcccgccGAAGCTGAAGGCGGTGGATGACCTGCTGCGCGAGCAGCGCGTGCAGATGGGCAATCGCGTGGCACCGTCGACCAAGGAAGGCATCCTCAGCGTGATCAAGGAAGTGCGCCgt > 1:520065/1‑119 (MQ=255) gcccgccGAAGCTGAAGGCGGTGGATGACCTGCTGCGCGAGCAGCGCGTGCAGATGGGCAATCGCGTGGCACCGTCGACCAAGGAAGGCATCCTCAGCGTGATCAAGGAAGTGCGCCgt < 2:520065/119‑1 (MQ=255) gcccgccGAAGCTGAAGGCGGTGGATGACCTGCTGCGCGAGCAGCGCGTGCAGATGGGCAATCGCGTGGCACCGTCGACCAAGGAAGGCATCCTCAGCGTGATCAAGGAAGTGCGCCGTGGTGGCCAGGTGGGTATTCCTGCCGACCCgg > 2:712141/1‑150 (MQ=255) gcccgccGAAGCTGAAGGCGGTGGATGACCTGCTGCGCGAGCAGCGCGTGCAGATGGGCAATCGCGTGGCACCGTCGACCAAGGAAGGCATCCTCAGCGTGATCAAGGAAGTGCGCCGTGGTGGCCAGGTGGGTAATCCTGCCGACCCgg > 2:80267/1‑150 (MQ=255) cccgccGAAGCTGAAGGCGGTGGATGACCTGCTGCGCGAGCAGCGCGTGCAGATGGGCAATCGCGTGGCACCGTCGACCAAGGAAGGCATCCTCAGCGTGAt < 1:1783110/102‑1 (MQ=255) cccgccGAAGCTGAAGGCGGTGGATGACCTGCTGCGCGAGCAGCGCGTGCAGATGGGCAATCGCGTGGCACCGTCGACCAAGGAAGGCATCCTCAGCGTGAt > 2:1783110/1‑102 (MQ=255) cccgccGAAGCTGAAGGCGGTGGATGACCTGCTGCGCGAGCAGCGCGTGCAGATGGGCAATCGCGTGGCACCGTCGACCAAGGAAGGCATCCTCAGCGTGATCAAGGAAGTGCGCCGTGGTGGCCAGGTGGGTATTCCTGCCGACCCGGa < 2:1802517/150‑1 (MQ=255) ccgccgAAGCTGAAGGCGGTGGATGACCTGCTGCGCGAGCAGCGCGTGCAGATGGGCAATCGCGt < 2:1872058/65‑1 (MQ=255) ccgccgAAGCTGAAGGCGGTGGATGACCTGCTGCGCGAGCAGCGCGTGCAGATGGGCAATCGCGt > 1:1872058/1‑65 (MQ=255) ccgccgAAGCTGAAGGCGGTGGATGACCTGCTGCGCGAGCAGCGCGTGCAGATGGGCAATCGCGTGGCACCGTCGACCAAGGAAGGCATCCTCAGCGTGATCAAGGAAGTGCGCCGTGGTGGCCAGGTGGGTATTCCTGCCGACCCGGAg > 2:575622/1‑150 (MQ=255) gccgAAGCTGAAGGCGGTGGATGACCTGCTGCGCGAGCAGCGCGTGCAGATGGGCAATCGCGTGGCACCGTCGACCAAGGAAGGCATCCTCAGCGTGATCAAGGAAGTGCGCCGTGGTGGCCa > 2:208673/1‑123 (MQ=255) gccgAAGCTGAAGGCGGTGGATGACCTGCTGCGCGAGCAGCGCGTGCAGATGGGCAATCGCGTGGCACCGTCGACCAAGGAAGGCATCCTCAGCGTGATCAAGGAAGTGCGCCGTGGTGGCCa < 1:208673/123‑1 (MQ=255) gAAGCTGAAGGCGGTGGATGACCTGCTGCGCGAGCAGCGCGTGCAGATGGGCAATCGCGTGGCACCGTCGACCAAGGAAGGCATCCTCAGCGTGATCAAGGAAGTGCGCCGTGGTGGCCAGGt > 2:17432/1‑123 (MQ=255) gAAGCTGAAGGCGGTGGATGACCTGCTGCGCGAGCAGCGCGTGCAGATGGGCAATCGCGTGGCACCGTCGACCAAGGAAGGCATCCTCAGCGTGATCAAGGAAGTGCGCCGTGGTGGCCAGGTGGGTATTCCTGCCGACCCGGAGCcggc < 1:1382388/150‑1 (MQ=255) gAAGCTCAAGGTGGTGGATGACCTGCTGCGCGAGCAGCGCGTGCAGATGGGCAATCGCGTGGCACCGTCGACCAAGGAAGGCATCCTCAGCGTGATCAAGGAAGTGCGCCGTGGTGGCCAGGTGGGTATTCCTGCCGACCCGGAGCcggc < 1:714156/150‑1 (MQ=255) tGAAGGCGGTGGATGACCTGCTGCGCGAGCAGCGCGTGCAGATGGGCAATCGCGTGGCACCGTCGACCAAGGAAGGCATCCTCAGCGTGATCAAGGAAGTGCGCCGTGGTGGCCAGGTGGGTATTCCTGCCGACCCGGAGCCGGCGGAAt < 1:712141/150‑1 (MQ=255) cGGTGGATGACCTGCTGCGCGAGCAGCGCGTGCAGATGGGCAATCGCGTGGCACCGTCGACCAAGGAAGGCATCCTCAGCGTGATCAAGGAAGTGCGCCGTGGTGGCCAGGTGGGTATTCCTGCCGACCCGGAGCCGGCGGAATcggcgg < 1:2183229/150‑1 (MQ=255) gACCTGCTGCGCGAGCAGCGCGTGCAGATGGGCAATCGCGTGGCACCGTCGACCaaggaa < 2:831719/60‑1 (MQ=255) gACCTGCTGCGCGAGCAGCGCGTGCAGATGGGCAATCGCGTGGCACCGTCGACCaaggaa > 1:831719/1‑60 (MQ=255) gACCTGCTGCGCGAGCAGCGCGTGCAGATGGGCAATCGCGTGGCACCGTCGACCAAGGAAGGCATCCTCAGCGTGATCAAGGAAGTGCGCCGTGGTGGCCAGGTGGGTATTCCTGACGACCCGGAGCCGGCGGAATCGGCGGGCGTGTTc < 1:816322/150‑1 (MQ=255) aCCTGCTGCGCGAGCAGCGCGTGCAGATGGGCAATCGCGTGGCACCGTCGACCAAGGAAGGCATCCTCAGCGTGATCAAGGAAGTGCGCCGTGGTGGCCAGGTGGGTATTCCTGCCGACCCGGAGCCGGCGGAATCGGCGGGCGTGTTCg > 1:418055/1‑150 (MQ=255) ccTGCTGCGCGAGCAGCGCGTGCAGATGGGCAATCGCGTGGCACCGTCGACCAAGGAAGGCATCCTCAGc < 2:665059/70‑1 (MQ=255) ccTGCTGCGCGAGCAGCGCGTGCAGATGGGCAATCGCGTGGCACCGTCGACCAAGGAAGGCATCCTCAGc > 1:665059/1‑70 (MQ=255) gctgcGCGAGCAGCGCGTGCAGATGGGCAATCGCGTGGCACCGTCGACCAAGGAAGGCATCCTCAGCGTGATCAAGGAAGTGCGCCGTGGTGGCCAGGTGGGTATTc < 2:1344374/107‑1 (MQ=255) cgcgAGCAGCGCGTGCAGATGGGCAATCGCGTGGCACCGTCGACCAAGGAAGGCATCCTCAGCGTGATCAAGGAAGTGCGCCGTGGTGGCCAGGTGGGTATTCCTGCCGACCCGGAGCCGGCGGAATCGGCGGGCGTGTTCGTACCGTTc < 2:2288822/150‑1 (MQ=255) gcgAGCAGCGCGTGCAGATGGGCAATCGCGTGGCACCGTCGACCAAGGAAGGCATCCTCAGCGTGATCAAGGaa < 2:1869052/74‑1 (MQ=255) | GGAGCAGGCCCTGGCCTCGGGTAAAGGCGTGGTCGGCATCACCAGCCACCTGGGCAACTGGGAAGTGTTGAACCACTTCTACTGCAACCAGTGCAAACCGATCATCTTCTACCGCCCGCCGAAGCTGAAGGCGGTGGATGACCTGCTGCGCGAGCAGCGCGTGCAGATGGGCAATCGCGTGGCACCGTCGACCAAGGAAGGCATCCTCAGCGTGATCAAGGAAGTGCGCCGTGGTGGCCAGGTGGGTATTCCTGCCGACCCGGAGCCGGCGGAATCGGCGGGCGTGTTCGTACCGTTC > NC_002947/73836‑74133 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |