| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 794,955 | T→A | 5.5% | I365N (ATT→AAT) | PP_0680 → | ATP‑dependent protease‑like protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 794,955 | 0 | T | A | 5.5% | 339.8 / 6.6 | 108 | I365N (ATT→AAT) | PP_0680 | ATP‑dependent protease‑like protein |
| Reads supporting (aligned to +/- strand): ref base T (53/49); new base A (2/4); total (55/53) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.33e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.83e-01 | |||||||||||
Only 100 of 108 total aligned reads displayed.
GTGGGGCGCCGGTGGTGTTCGAGCCGCACCCGACCTATGACAATTTGTTTGGCCGTATCGAATACAGCACCGACCAAGGTGCGCTGTATACCTCCTATCGCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTATGGGACGCGCTCAAGCGTGCGTTGCAGTCGCGCAAGCTGAAGATGGAGTCGCCGATCGGTGAGCTGGGCCGTGTTGCCACTGTCAGCCTGCAGCCGCAGGTGATTCCGC > NC_002947/794808‑795101 | gTGGGGCGCCGGTGGTGTTCGAGCCGCACCCGACCTATGACAATTTGTTTGGCCGTATCGAATACAGCACCGACCAAGGTGCGCTGTATACCTCCTATCGCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTc < 2:2062662/150‑1 (MQ=255) cgcCGGTGGTGTTCGAGCCGCACCCGACCTATGACAATTTGTTTGGCCGTATCGAATACAGCACCGACCAAGGTGCGCTGTATACCTCCTATCGCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAg < 2:1864673/150‑1 (MQ=255) gcCGGTGGTGTTCGAGCCGCACCCGACCTATGACAATTTGTTTGGCCGTATCGAATACAGCACCGACCAAGGTGCGCTGTATACCTCCTATCGCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCAGAATCAGGAAGc < 1:817021/150‑1 (MQ=255) ccGGTGGTGTTCGAGCCGCACCCGACCTATGACAATTTGTTTGGCCGTATCGAATACAGCACCGACCAAGGTGCGCTGTATACCTCCTATCGCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCAGAATCAGGAAGcc < 1:2368307/150‑1 (MQ=255) ccGGTGGTGTTCGAGCCGCACCCGACCTATGACAATTTGTTTGGCCGTATCGAATACAGCACCGACCAAGGTGCGCTGTATACCTCCTATCGCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCAGAATCAGGAAGcc < 2:2357257/150‑1 (MQ=255) ggtggtGTTCGAGCCGCACCCAGCCTATGACAATTTGTTTGGCCGTATCGAATACAGCACCGACCAAGGTGCGCTGTATACCTCCTATCGCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCga < 1:1118472/150‑1 (MQ=255) tggtgTTCGAGCCGCACCCGACCTATGACAATTTGTTTGGCCGTATCGAATACAGCACCGACCAAGGTGCGCTGTATACCTCCTATCGCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCgaga > 2:2059156/1‑150 (MQ=255) gtgtTCGAGCCGCACCCGACCTATGACAATTTGTTTGGCCGTATCGAATACAGCACCGACCAAGGTGCGCTGTATACCTCCTATCGCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGaaa > 1:2255583/1‑150 (MQ=255) gtgtTCGAGCCGCACCCGACCTATGACAATTTGTTTGGCCGTATCGAATACAGCACCGACCAAGGTGCGCTGTATACCTCCTATCGCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCAGAATCAGGAAGCCgccgtt < 2:1147920/150‑6 (MQ=255) gtTCGAGCCGCACCCGACCTATGACAATTTGTTTGGCCGTATCGAATACAGCACCGACCAAGGTGCGCTGTATACCTCCTATCGCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAAt > 1:2387456/1‑150 (MQ=255) gCCGCACCCGACCTATGACAATTTGTTTGGCCGTATCGAATACAGCACCGACCAAGGTGCGCTGTATACCTCCTATCGCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTg < 1:321754/130‑1 (MQ=255) gCCGCACCCGACCTATGACAATTTGTTTGGCCGTATCGAATACAGCACCGACCAAGGTGCGCTGTATACCTCCTATCGCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTg > 2:321754/1‑130 (MQ=255) gCCGCACCCGACCTATGACAATTTGTTTGGCCGTATCGAATACAGCACCGACCAAGGTGCGCTGTATACCTCCTATCGCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCTggg > 2:1098784/1‑150 (MQ=255) gCCGCACCCGACCTATGACAATTTGTTTGGCCGTATCGAATACAGCACCGACCAAGGTGCGCTGTATACCTCCTATCGCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCTggg > 1:1168346/1‑150 (MQ=255) ccGCACCCGACCTATGACAATTTGTTTGGCCGTATCGAATACAGCACCGACCAAGGTGCGCTGTATACCTCCTATCGCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCTGGGt < 2:1764060/150‑1 (MQ=255) cACCCGACCTATGACAATTTGTTTGGCCGTATCGAATACAGCACCGACCAAGGTGCGCTGTATACCTCCTATCGCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGaa < 2:1141110/129‑1 (MQ=255) cACCCGACCTATGACAATTTGTTTGGCCGTATCGAATACAGCACCGACCAAGGTGCGCTGTATACCTCCTATCGCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAAAGGCGGCTTCCTGATTCTGGaa > 1:1141110/1‑129 (MQ=255) cTATGACAATTTGTTTGGCCGTATCGAATACAGCACCGACCAAGGTGCGCTGTATACCTCCTATCGCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGt > 2:526457/1‑150 (MQ=255) tATGACAATTTGTTTGGCCGTATCGAATACAGCACCGACCAAGGTGCGCTGTATACCTCCTATCGCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTa < 1:147166/150‑1 (MQ=255) aTGACAATTTGTTTGGCCGTATCGAATACAGCACCGACCAAGGTGCGCTGTATACCTCCTATCGCAGATTTCGCCCAGCAGCGCTGCACCGTGCCACCGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTAt < 1:1375956/150‑1 (MQ=255) tGACAATTTGTTTGGCCTTATCGAATACAGCACCGACCAAGGTGCGCTGTATACCTCCTATCGCCCAATCCCCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAGGCCGAGAAAATGCTGGGTGAGCCGTTCGTATg < 1:1355058/150‑1 (MQ=255) gACAATTTGTTTGGCCGTATCGAATACAGCACCGACCAAGGTGCGCTGTATACCTCCTATCGCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCTTGGTGAGCCGTTCGTATgg > 2:2033265/1‑150 (MQ=255) gACAATTTGTTTGGCCGTATCGAATACAGCACCGACCAAGGTGCGCTGTATACCTCCTATCGCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTATgg > 1:2165369/1‑150 (MQ=255) gACAATTTGTTTGGCCGTATCGAATACAGCACCGACCAAGGTGCGCTGTATACCTCCTATCGCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTATgg < 1:2239017/150‑1 (MQ=255) aaTTTGTTTGGCCGTATCGAATACAGCACCGACCAAGGTGCGCTGTATACCTCCTATCGCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTATgg < 2:15025/147‑1 (MQ=255) aaTTTGTTTGGCCGTATCGAATACAGCACCGACCAAGGTGCGCTGTATACCTCCTATCGCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTATgg > 1:15025/1‑147 (MQ=255) aaTTTGTTTGGCCGTATCGAATACAGCACCGACCAAGGTGCGCTGTATACCTCCTATCGCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTATGGGAc > 2:1087443/1‑150 (MQ=255) tttgtttgGCCGTATCGAATACAGCACCGACCAAGGTGCGCTGTATACCTTGTAGCGCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTATGGGAcgc > 1:1978239/1‑150 (MQ=255) tttctctgGCCGCATCGAATACAGCACCGACCAAGGTGCGCTGTATACCTCCTATCGCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTATGGGAcgc < 2:1978239/144‑1 (MQ=255) tgtttgGCCGTATCGAATACAGCACCGACCAAGGTGCGCTGTATACCTCCTATCGCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTATGGGACgcgc < 1:1098784/150‑1 (MQ=255) gtttgGCCGTATCGAATACAGCACCGACCAAGGTGCGCTGTATACCTCCTATCGCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCTGGGTGa > 2:1128773/1‑129 (MQ=255) gtttgGCCGTATCGAATACAGCACCGACCAAGGTGCGCTGTATACCTCCTATCGCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCTGGGTGa < 1:1128773/129‑1 (MQ=255) tgGCCGTATCGAATACAGCACCGACCAAGGTGCGCTGTATACCTCCTATCGCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTATGGGAcgc < 1:2215727/144‑1 (MQ=255) tgGCCGTATCGAATACAGCACCGACCAAGGTGCGCTGTATACCTCCTATCGCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTATGGGAcgc > 2:2215727/1‑144 (MQ=255) gTATCGAATACAGCACCGACCAAGGTGCGCTGTATACCTCCTATCGCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGTGAAAATGCTGGGTGAGCCGTTCGTATGGGACGCGCTCAAgcgtg > 1:263796/1‑150 (MQ=255) gTATCGAATACAGCACCGACCAAGGTGCGCTGTATACCTCCTATCGCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCt > 1:1598278/1‑115 (MQ=255) gTATCGAATACAGCACCGACCAAGGTGCGCTGTATACCTCCTATCGCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCt < 2:1598278/115‑1 (MQ=255) tATCGAATACAGCACCGACCAAGGTGCGCTGTATACCTCCTATCGCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTATGGGACGCGCTCAAgcgtg < 1:1735059/149‑1 (MQ=255) tATCGAATACAGCACCGACCAAGGTGCGCTGTATACCTCCTATCGCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTATGGGACGCGCTCAAgcgtg > 2:1735059/1‑149 (MQ=255) tCGAATACAGCACCGACCAAGGTGCGCTGTATACCTCCTATCGCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTATGGGACGCGCTCAAgcgtgcgt > 1:2385098/1‑150 (MQ=255) ggAATACAGCACCGACCAAGGTGCGCTGTATACCTCCTATCGCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTATGGGACGCGCTCAAGCGTGCGtt < 2:2385098/149‑1 (MQ=255) gAATACAGCACCGACCAAGGTGCGCTGTATACCTCCTATCGCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTATGGGACGCGCTCAAGCGTGCGTTg > 2:1594813/1‑150 (MQ=255) aaTACAGCACCGACCAAGGTGCGCTGTATACCTCCTATCGCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGaaaa > 1:792275/1‑105 (MQ=255) aaTACAGCACCGACCAAGGTGCGCTGTATACCTCCTATCGCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGaaaa < 2:792275/105‑1 (MQ=255) tACAGCACCGACCAAGGTGCGCTGTATACCTCCTATCGCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTATGGGACGCGCTCAAGCGTGCGTTGCAg > 2:735495/1‑150 (MQ=255) cAGCACCGACCAAGGTGCGCTGTATACCTCCTATCGCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTATGGGACGCGCTCAAGCGTGCGTTGc < 2:1355523/146‑1 (MQ=255) cAGCACCGACCAAGGTGCGCTGTATACCTCCTATCGCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTATGGGACGCGCTCAAGCGTGCGTTGc > 1:1355523/1‑146 (MQ=255) gCACCGACCAAGGTGCGCTGTATACCTCCTATCGCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTATGGGACGCGCTCAAGCGTGCGTTGCAGTcgc < 2:2148404/150‑1 (MQ=255) gACCAAGGTGCGCTGTATACCTCCTATCGCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTa > 2:1945440/1‑114 (MQ=255) gACCAAGGTGCGCTGTATACCTCCTATCGCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTa < 1:1945440/114‑1 (MQ=255) gACCAAGGTGCGCTGTATACCTCCTATCGCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTATGGGACGCGCTCAAGCGTGCGTTGCAGTCGCGCAAg < 2:1536696/150‑1 (MQ=255) cAAGGTGCGCTGTATACCTCCTATCGCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCTg < 2:1342922/96‑1 (MQ=255) cAAGGTGCGCTGTATACCTCCTATCGCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCTg > 1:1342922/1‑96 (MQ=255) ggTGCGCTGTATACCTCCTATCGCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCTg < 1:105756/93‑1 (MQ=255) ggTGCGCTGTATACCTCCTATCGCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCTg > 2:105756/1‑93 (MQ=255) gTGCGCTGTATACCTCCTATCGCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCTTGGTGAGCCGTTCGTATGGGACGCGCTCAAGCGTGCGTTGCAGTCGCGCAAGCTGAAGa < 1:2033265/150‑1 (MQ=255) tGCGCTGTATACCTCCTATCGCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTATGGGACGCGCTCAAGCGTGCGTTGCAGTCGCGCAAGCTGAAGAt < 1:1087443/150‑1 (MQ=255) gcgcTGTATACCTCCTATCGCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCt > 1:308544/1‑71 (MQ=255) gcgcTGTATACCTCCTATCGCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTATGGGACGCGCTCAAGCGTGCGTTg > 1:915300/1‑129 (MQ=255) gcgcTGTATACCTCCTATCGCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTATGGGACGCGCTCAAGCGTGCGTTg < 2:915300/129‑1 (MQ=255) gcgcTGTATACCTCCTATCGCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTATGGGACGCGCTCAAGCGTGCGTTGCAGTCGCGCAAGCTGAAGATg < 2:2255583/150‑1 (MQ=255) gcgcTGTATACCTCCTATCGCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTATGGGACGCGCTCAAGCGTGCGTTGCAGTCGCGCAAGCTGAAGATg < 1:735495/150‑1 (MQ=255) gcTGTATACCTCCTATCGCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTATGGGACGCGCTCAAGCGTGCGTTGCAGTCGCGCAAGCTGAAGATGGa < 2:2165369/150‑1 (MQ=255) gcTGTATACCTCCTATCGCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTATGGGACGCGCTCAAGCGTGCGTTGCAGTCGCGCAAGCTGAAGATGGa > 2:2076422/1‑150 (MQ=255) cTGTATACCTCCTATCGCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTATgg > 1:960584/1‑105 (MQ=255) cTGTATACCTCCTATCGCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTATgg < 2:960584/105‑1 (MQ=255) cTGTATACCTCCTATCGCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTATGGGACGCGCTCAAGCGTGCGTTGCAGTCGCGCAAGCTGAAGATGGAg > 2:981237/1‑150 (MQ=255) tcctATCGCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTATGGGACGCGCTCAAGCGTGCGTTGCAGTCGCGCAAGCTGAAGATGGAGTCGCCGATc > 1:2249866/1‑150 (MQ=255) tCGCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTATGGGACGCGCTCAAGCGTGCGTTg < 2:1614876/112‑1 (MQ=255) tCGCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTATGGGACGCGCTCAAGCGTGCGTTg > 1:1614876/1‑112 (MQ=255) tCGCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTATGGGACGCGCTCAAGCGTGCGTTGCAGTCGCGCAAGCTGAAGATGGAGTCGCCGATCGGTGa > 2:1385797/1‑150 (MQ=255) aaCTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTATGGGACGCGCTCAAGCGTGCGTTGCAGTCGCGCAAGCTGAAGATGGAGTCGCCGATCGGTGAGCTgg > 2:217223/1‑150 (MQ=255) tGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTATGGGACGCGCTCAAGCGTGCGTTGCAGTCGCGCAAGCTGAAGATGGAGTCGCCGATCGGt < 2:33093/140‑1 (MQ=255) tGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTATGGGACGCGCTCAAGCGTGCGTTGCAGTCGCGCAAGCTGAAGATGGAGTCGCCGATCGGt > 1:33093/1‑140 (MQ=255) gcgcCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTATGGGACGCGCTCAAGCGTGCGTTGCAGTcgc < 1:1457180/110‑1 (MQ=255) gcgcCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTATGGGACGCGCTCAAGCGTGCGTTGCAGTcgc > 2:1457180/1‑110 (MQ=255) ggcCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTATGGGACGCGCTCAAGCGTGCGTTGCAGTCGCGCAAGCTGAAGATGGAGTCGCCGATCGGTGAGCTGGGCCgt < 1:217223/149‑1 (MQ=255) cgcCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTATGGGACGCGCTCAAGCGTGCGTTGCAGTCGCGCAAGCTGAAGATGGAGTCGCCGATCGGTGAGCTGGGCCgt < 2:2249866/150‑1 (MQ=255) gcCCAGGAGCGATGCACCGTTCCAACGGCGGCTTCCTGCTTGCGTGTGGTTAAAGAAGGCTGGGTGAGCCGTTCGGATGTGACGCGCTCAAGCGTGCGTATCAGTCGCGCAAGCTGAAGTTGGAGTCGCCGATCGGTGAGCgggtcagtt > 2:339614/1‑144 (MQ=255) cAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTATGGGACGCGCTCAAGCGTGCGTTGCAGTCGCGCAAGCTGAAGATGGAGTCGCCGATCGGTGAGCTGGGCCGTGTTg > 2:549295/1‑150 (MQ=255) aGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTATGGGACGCGCTCAAGCGTGCGTTGCAGTCGCGCAAGCTGAAGATGGAGTCGCCGATCGGTGa < 2:292828/135‑1 (MQ=255) gcTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCTGGGTGGGCCGTTCGTATGGGACGCGCTCAAGCGTGCGTTGCAGTCGCGCAAGCTGAAGATGGAGTCGCCGATCGGTGAGCTGGGCCGTGTTGCCACTGt < 1:2140359/150‑1 (MQ=255) tGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTATGGGACGCGCTCAAGCGTGCGTTGCAGTCGCGCAAGCTGAAGATGGAg > 2:1356988/1‑113 (MQ=255) tGCACCGGGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTAGGGGACGCGCTCAAGCGTGCGTTGCAGTCGCGCAAGCTGAAGATGGAg < 1:1356988/113‑1 (MQ=255) cACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTATGGGACGCGCTCAAGCGTGCGTTGCAGTCGCGCAAGCTGAAGATGGAGTCGCCGATCGGTGAGCTGGGCCGTGTTGCCACTGTCAGc < 1:526457/150‑1 (MQ=255) cAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTATGGGACGCGCTCAAGCGTGCGTTGCAGTCGCGCAAGCTGAAGATGGAGTCGCCGATCGGTGAGCTGCAGCGTGGTGCCACTGTCAGCCTGCAGcc > 2:1161503/1‑150 (MQ=255) aaCGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTATGGGACGCGCTCAAGCGTGCGTTGCAGTCGCGCAAGCTGAAGATGGAGTCGCCGATCGGTGAGCTGGGCCGTGTTGCCACTGTCAGCCTGCAGCCg > 1:653687/1‑150 (MQ=255) tcggcTTCCAGAATCAGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTATGGGACGCGCTCAAGCGTGCGTTGCAGTCGCGCAAGCTGAAGATGGAGTCGCCGATCGGTGAGCTGGGCCGTGTTGCCACTGTCAGCCTGCAGCCGCAgg > 1:2286121/2‑150 (MQ=255) ggcTTCCAGAATCAGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTATGGGACGCGCTCAAGCGTGCGTCGCAGTCGCGCAAGCTGAAGATGGAGTCGCCGATCGGTGAGCTGGGCCGTGTTGCCACTGTCAGCCTGCAGCCGCAGGTg > 2:1534094/1‑150 (MQ=255) ttCCTGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTATGGGACGCGCTCAAGCGTGCGTTGAAGTCGCGCAAGCTGAAGATGGAGTCGCCGATCGTTGAGCTGGGCCGTGTTGCCACTGTGAGGCTGCAGCCGCAGGTGAtt > 1:1929576/1‑150 (MQ=255) ccTGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTATGGGACGCGCTCAAGCGTGCGTTGCAGTCGCGCAAGCTGAAGATGGAGTCGCCGATCGGTGAGCTGGGCCGTGTTGCCACTGTCAGCCTGCAGACGCAGGTGATTcc > 2:136503/1‑150 (MQ=255) cTGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTATGGGACGCGCTCAAGCGTGCGTTGCAGTCGCGCAAGCTGAAGATg > 2:1698549/1‑87 (MQ=255) cTGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTATGGGACGCGCTCAAGCGTGCGTTGCAGTCGCGCAAGCTGAAGATg < 1:1698549/87‑1 (MQ=255) cTGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTATGGGACGCGCTCAAGCGTGCGTTGCAGTCGCGCAAGCTGAAGATGGAGTCGCCGATCGGTGAGCTgg < 1:623802/109‑1 (MQ=255) cTGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTATGGGACGCGCTCAAGCGTGCGTTGCAGTCGCGCAAGCTGAAGATGGAGTCGCCGATCGGTGAGCTgg > 2:623802/1‑109 (MQ=255) cTGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTATGGGACGCGCTCAAGCGTGCGTTGCAGTCGCGCAAGCTGAAGATGGAGTCGCCGATCGGTGAGCTGGGCCGTGTTGCCACTGTCAGCCTGCAGCCGCAGGTGATTCCg > 1:1948411/1‑150 (MQ=255) cTGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTATGGGACGCGCTCAAGCGTGCGTTGCAGTCGCGCAAGCTGAAGATGGAGTCGCCGATCGGTGAGCTGGGCCGTGTTGCCACTGTCAGCCTACAGc < 2:785053/136‑1 (MQ=255) cTGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTATGGGACGCGCTCAAGCGTGCGTTGCAGTCGCGCAAGCTGAAGATGGAGTCGCCGATCGGTGAGCTGGGCCGTGTTGCCACTGTCAGCCTACAGc > 1:785053/1‑136 (MQ=255) cTGATTCTGGAAGCCGAGAAAATGCTGGGTAAGCAGTTAGTCTCCGCCACCCACAAGCTGGCGTTGCAGTTGCGCAAGCTGAAGATGGAGTCGCCGATCGGTGAGCTGGGCCGTGTTGCCACTGTCAGCCTGCAGCCGCAGGTGATTCCg > 1:1023282/1‑150 (MQ=255) tGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTATGGGACGCGCTCAAGCGTGCGTTGCAGTCGCGCAAGCTGAAGATGGAGTCGCCGATCGGTGAGCTGGGCCGTGTTGCCACTGTCAGCCTGCAGCCGCAGGTGATTCCGc < 1:1594813/150‑1 (MQ=255) | GTGGGGCGCCGGTGGTGTTCGAGCCGCACCCGACCTATGACAATTTGTTTGGCCGTATCGAATACAGCACCGACCAAGGTGCGCTGTATACCTCCTATCGCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTATGGGACGCGCTCAAGCGTGCGTTGCAGTCGCGCAAGCTGAAGATGGAGTCGCCGATCGGTGAGCTGGGCCGTGTTGCCACTGTCAGCCTGCAGCCGCAGGTGATTCCGC > NC_002947/794808‑795101 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |