| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 812,051 | T→C | 7.2% | Q68Q (CAA→CAG) | PP_0698 ← | LysR family transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 812,051 | 0 | T | C | 7.2% | 326.6 / 10.5 | 111 | Q68Q (CAA→CAG) | PP_0698 | LysR family transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base T (52/50); new base C (2/6); total (54/57) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.71e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.50e-01 | |||||||||||
Only 100 of 113 total aligned reads displayed.
GTGGCATGGAAGCGCGGCAGGCGCGGGATCAGCCAGCGCATGGCGATGGTCGGTTCGCAAGACAGCACCAGCACATTGTCGCGAGCTTGTTGCTGCAGGCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGCCCGGTTGCGGCGTTCGAACAGTTCCACGCCAAGGCTTTCTTCCAGCAGGCGTATTTGGCGGCTGACCGCGCCGTGAGTGACGTGCAAGTGCTCGGCGGCGCGCACGAAGCTCTC > NC_002947/811905‑812200 | gtggCATGGAAGCGCGGCAGGCGCGGGATCAGCCAGCGCATGGCGATGGTCGGTTCGCAAGACAGCACCAGCACATTGTCGCGAGCTTGTTGCTGCAGGCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGc > 1:2188779/1‑150 (MQ=255) cATGGAAGCGCGGCAGGCGCGGGATCAGCCAGCGCGTTTCGATGGTCGGTTCGCAAGACAGCACCAGTCCACAGTCGCGAGCTTGTTGCTGCAGGCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAggg < 1:1621736/150‑1 (MQ=255) cATGGAAGCGCGGCAGGCGCGGGATCAGCCAGCGCATGGCGATGGTCGGTTCGCAAGACAGCACCAGCACATTGTCGCGAGCTTGTTGCTGCAGGCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTCGTGCCCTGCAagg < 2:158258/150‑1 (MQ=255) aTGGAAGCGCGGCAGGCGCGGGATCAGCCAGCGCATGGCGATGGTCGGTTCGCAAGACAGCACCAGCACATTGTCGCGAGCTTGTTGCTGCAGGCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAgggg > 2:1184348/1‑149 (MQ=255) aGCGCGGCAGGCGCGGGATCAGCCAGCGCATGGCGATGGTCGGTTCGCAAGACAGCACCAGCACATTGTCGCGAGCTTGTTGCTGCAGGCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCTTGGGTCGTGCCCTGCAAGGcaccac < 1:68953/150‑1 (MQ=255) aGCGCGGCAGGCGCGGGATCAGCCAGCGCATGGCGATGGTCGGTTCGCAAGACAGCACCAGCACATTGTCGCGAGCTTGTTGCTGCAGGCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCCTGCAAGGcaccac < 2:891362/150‑1 (MQ=255) gcgcGGCAGGCGCGGGATCAGCCAGCGCATGGCGATGGTCGGTTCGCAAGACAGCACCAGCACATTGTCGCGAGCTTGTTGCTGCAGGCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGAcc > 2:1661177/1‑150 (MQ=255) ggCAGGCGCGGGATCAGCCAGCGCATGGCGATGGTCGGTTCGCAAGACAGCACCAGCACATTGTCGCGAGCTTGTTGCTGCAGGCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACcggcg > 2:367471/1‑150 (MQ=255) ggCAGGCGCGGGATCAGCCAGCGCATGGCGATGGTCGGTTCGCAAGACAGCACCAGCACATTGTCGCGAGCTTGTTGCTGCAGGCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACcggcg < 1:815381/150‑1 (MQ=255) ggCAGGCGCGGGATCAGCCAGCGCATGGCGATGGTCGGTTCGCAAGACAGCACCAGCACATTGTCGCGAGCTTGTTGCTGCAGGCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACcggcg > 2:815381/1‑150 (MQ=255) gCAGGCGCGGGATCAGCCAGCGCATGGCGATGGTCGGTTCGCAAGACAGCACCAGCACATTGTCGCGAGCTTGTTGCTGCAGGCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACcggcgg > 2:1331990/1‑150 (MQ=255) aGGCGCGGGATCAGCCAGCGCATGGCGATGGTCGGTTCGCAAGACAGCACCAGCACATTGTCGCGAGCTTGTTGCTGCAGGCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCgggg < 2:1385253/150‑1 (MQ=255) aGGCGCGGGATCAGCCAGCGCATGGCGATGGTCGGTTCGCAAGACAGCACCAGCACATTGTCGCGAGCTTGTTGCTGCAGGCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCgggg > 2:418682/1‑150 (MQ=255) aGGCGCGGGATCAGCCAGCGCATGGCGATGGTCGGTTCGCAAGACAGCACCAGCACATTGTCGCGAGCTTGTTGCTGCAGGCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCgggg < 2:767325/150‑1 (MQ=255) gcgcGGGATCAGCCAGCGCATGGCGATGGTCGGTTCGCAAGACAGCACCAGCACATTGTCGCGAGCTTGTTGCTGCAGGCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGt < 2:1586599/150‑1 (MQ=255) gcgGGATCAGCCAGCGCATGGCGATGGTCGGTTCGCAAGACAGCACCAGCACATTGTCGCGAGCTTGTTGCTGCAGGCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGa < 1:403930/150‑1 (MQ=255) gcgGGATCAGCCAGCGCATGGCGATGGTCGGTTCGCAAGACAGCACCAGCACATTGTCGCGAGCTTGTTGCTGCAGGCGCTGCACGGCGCCATCAAGTGGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGa < 1:667296/150‑1 (MQ=255) cgGGATCAGCCAGCGCATGGCGATGGTCGGTTCGCAAGACAGCACCAGCACATTGTCGCGAGCTTGTTGCTGCAGGCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGAg < 2:142019/150‑1 (MQ=255) ggATCAGCCAGCGCATGGCGATGGTCGGTTCGCAAGACAGCACCAGCACATTGTCGCGAGCTTGTTGCTGCAGGCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACcggcgg < 1:905891/141‑1 (MQ=255) tCAGCCAGCGCATGGCGATGGTCGGTTCGCAAGACAGCACCAGCACATTGTCGCGATCTTGTTGCTGCAGGCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCCTGCAAGGCAcca < 1:1141955/131‑3 (MQ=255) tCAGCCAGCGCATGGCGATGGTCGGTTCGCAAGACAGCACCAGCACATTGTCGCGAGCTTGTTGCTGCAGGCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCCTGCAAGGCAcca > 2:1141955/1‑129 (MQ=255) ccagcGCATGGCGATGGTCGGTTCGCAAGACAGCACCAGCACATTGTCGCGAGCTTGTTGCTGCAGGCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGc > 2:1143869/1‑150 (MQ=255) ccagcGCATGGCGATGGTCAGTTCGCAAGACAGCACCAGCACATTGTCGCGAGCTTGTTGCTGCAGGCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGc > 2:1860915/1‑150 (MQ=255) gcgcATGGCGATGGTCGGTTCGCAAGACAGCACCAGCACATTGTCGCGAGCTTGTTGCTGCAGGCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGCCCg < 2:1376145/150‑1 (MQ=255) gcATGGCGATGGTCGGTTCGCAAGACAGCACCAGCACATTGTCGCGAGCTTGTTGCTGCAGGCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGCCCGGt > 2:186021/1‑150 (MQ=255) ggTCGGTTCGCAAGACAGCACCAGCACATTGTCGCGAGCTTGTTGCTGCAGGCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCTGCGGGGGTGAGGAAAATGGCCCGGTTGCGGCGTTc < 2:502014/150‑1 (MQ=255) ggTCGGTTCGCAAGACAGCACCAGCACATTGTCGCGAGCTTGTTGCTGCAGGCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGCCCGGTTGCGGCGTTc < 2:2081917/150‑1 (MQ=255) cagTTCGCAAGACAGCACCAGCACATTGTCGCGAGCTTGTTGCTGCAGGCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGCCCGGTTGCGGCGTTCGaa < 1:1860915/148‑1 (MQ=255) cGGTTCGCAAGACAGCACCAGCACATTGTCGCGAGCTTGTTGCTGCAGGCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGCCCGGTTGCGGCGTTCGaa < 1:612623/150‑1 (MQ=255) gTTCGCAAGACAGCACCAGCACATTGTCGCGAGCTTGTTGCTGCAGGCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGCCCGGTTGCGGCGTTCGAACa < 1:1661177/150‑1 (MQ=255) gCAAGACAGCACCAGCACATTGTCGCGAGCTTGTTGCTGCAGGCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGCCCGGTTGCGGCGTTCGAACAGTTc < 2:335654/150‑1 (MQ=255) aaGACAGCACCAGCACATTGTCGCGAGTGTGTTGCTGCAGGCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGCCCGGTTGCGGCGTTCGAACAGTTCCa > 1:2130825/1‑150 (MQ=255) aaGACAGCACCAGCACATTGTCGCGAGCTTGTTGCTGCAGGCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGCCCGGTTGCGGCGTTCGAACAGTTCCa > 1:163260/1‑150 (MQ=255) aaGACAGCACCAGCACATTGTCGCGAGCTTGTTGCTGCAGGCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGCCCGGTTGCGGCGTTCGAACAGTTCCa > 1:1065820/1‑150 (MQ=255) aaGACAGCACCAGCACATTGTCGCGAGCTTGTTGCTGCAGGCGCTGCACGGCGCCTTAGAGCTGTTCGAAGATGGCCTGGGGGGGGCCTTGGAGGGCACGACCGGCGGGGGTGAGGAAAATGGCCCGGTTGCGGCGTTCGAACAGTTCCa > 1:899543/1‑150 (MQ=255) gACAGCACCAGCACATTGTCGCGAGCTTGTTGCTGCAGGCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGCCCGGTTGCGGCGTTCGAACAGTTCCACg > 1:2036016/1‑150 (MQ=255) gACAGCACCAGCACATTGTCGCGAGCTTGTTGCTGCAGGCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTCGTGCCCTGCAAGGCaccaccca > 1:299017/1‑101 (MQ=38) gACAGCACCAGCACATTGTCGCGAGCTTGTTGCTGCAGGCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTCGTGCCCTGCAAGGCaccaccca < 2:299017/103‑3 (MQ=38) acggcaccagcacATTGTCGCGAGCTTGTTGCTGCAGGCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGCCCGGTTGCGGCGTTCGAACAGTTCCACGc > 1:2402911/4‑150 (MQ=255) caccagcacATTGTCGCGAGCTTGTTGCTGCAGGCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGCCCGGTTGCGGCGTTCGAACAGTTCCACGCCAAg > 2:12293/1‑150 (MQ=255) accagcacATTGTCGCGAGCTTGTTGCTGCAGGCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATg < 1:583528/114‑1 (MQ=255) accagcacATTGTCGCGAGCTTGTTGCTGCAGGCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGCCCGGTTGCGGCGTTCGAACAGTTCCACGCCAAgg < 1:1239840/150‑1 (MQ=255) cagcacATTGTCGCGAGCTTGTTGCTGCAGGCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGCCCGGTTGCGGCGTTCGAACAGTTCCACGCCAAGGCt > 1:2243605/1‑150 (MQ=255) aTTGTCGCGAGCTTGTTGCTGCAGGCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGCCCGGTTGCGGCGTTCGAACAGTTCCACGCCAAGGCTttcttc < 2:163260/150‑1 (MQ=255) aTTGTCGCGAGCTTGTTGCTGCAGGCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGATTAGCATGGCACGACCGGCGGGGTTGAGGAAAATGGCCCGGTTGCGGCGTTCGAACAGTTCCACGCCAAGGCTttcttc < 1:1496386/150‑1 (MQ=255) ttGTCGCGAGCTTGTTGCTGCAGGCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGCCCGGTTGCGGCGTTCGAACAGTTCCACGCCAAGGCTTGCTTcc > 1:104335/1‑150 (MQ=255) ttGTCGCGAGCTTGTTGCTGCAGGCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGACCGGTTGCGGCGTTCGAACAGTTCCACGCCAAGGCTTTCTTcc > 1:1335561/1‑150 (MQ=255) gcgAGCTTGTTGCTGCAGGCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGCCCGGTTGCGGCGTTCGAACAGTTCCACGCCaa > 2:1968821/1‑134 (MQ=255) gcgAGCTTGTTGCTGCAGGCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGCCCGGTTGCGGCGTTCGAACAGTTCCACGCCaa < 1:1968821/134‑1 (MQ=255) gcgAGCTTGTTGCTGCAGGCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGCCCGGTTGCGGCGTTCGAACAGTTCCACGCCAAGGCTTTCTTCcagcag < 1:367471/150‑1 (MQ=255) gcgAGCTTGTTGCTGCAGGCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTGGTCATGATCAGGTCACGACCGGCGGGGGTGAGGAAAATGGCCCGGTTGCGGCGTTCGAACAGTTCCACGCCAAGGCTTTCTTCcagcag < 1:150356/150‑1 (MQ=255) cgAGCTTGTTGCTGCAGGCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGCCCGGTTGCGGCGTTCGAACAGTTCCACGCCAAGGCTTTCTTCCAGCAgg < 2:2402911/150‑1 (MQ=255) cgAGCTTGTTGCTGCAGGCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGCCCGGTTGCGGCGTTCGAACAGTTCCACGCCAAGGCTTTCTTCCAGCAgg < 1:12293/150‑1 (MQ=255) gAGCTTGTTGCTGCAGGCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCggg < 2:35131/85‑1 (MQ=255) gAGCTTGTTGCTGCAGGCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCggg > 1:35131/1‑85 (MQ=255) cTTGTTGCTGCAGGCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGCCCGGTTGCGGCGTTCGAACAGTTCCACGCCAAGGCTTTCTTCCAGCAGGCGTa > 1:1654508/1‑150 (MQ=255) ttgttgATGCAGGCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGCCCGGTTGCGGCGTTCGAACAGTTCCACGCCAAGGCTTTCTTCCAGCAGGCGTAt > 2:31435/1‑150 (MQ=255) gttgCTGCAGGCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGCCCGGTTGCGGCGTTCGAACAGTTCCACGCCAAGGCTTTCTTCCAGCAGGCGTAttt > 1:192762/1‑150 (MQ=255) ttgCTGCAGGCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGCCCGGTTGCGGCGTTCGAACAGTTCCACGCCAAGGCTTTCTTCCAGCAGGCGTATTTg > 2:581654/1‑150 (MQ=255) ttgCTGCAGGCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGCCCGGTTGCGGCGTTCGAACAGTTCCACGCCAAGGCTTTCTTCCAGCAGGCGTATTTg > 2:2007563/1‑150 (MQ=255) tgctgcAGGCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGCCCGGTTGCGGCGTTCGAACAGTTCCACGCCAAGGCTTTCTTCCAGCAGGCGTATTTgg < 1:581654/150‑1 (MQ=255) tgcAGGCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGCCCGGTTGCGGCGTTCGAACAGTTCCACGCCAAGGCTTTCTTCCAGCAGGCGTATTTggcgg < 2:405081/150‑1 (MQ=255) tgcAGGCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGCCCGGTTGCGGCGTTCGAACAGTTCCACGCCAAGGCTTTCTTCCAGCAGGCGTATTTggcgg > 1:706447/1‑150 (MQ=255) cgggCGCTGGACGGCGCCGTCGAGCCGTTCGAGGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGCCCGGTTGCGGCGTTCGAACAGTTCCACGCCAAGGCTTTCTTCCAGCAGGCGTATTTGGCGGCt < 2:802739/148‑1 (MQ=255) gcgcTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGCCCGGTTGCGGCGTTCGAACAGTTCCAc > 1:711723/1‑111 (MQ=255) gcgcTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGCCCGGTTGCGGCGTTCGAACAGTTCCAc < 2:711723/111‑1 (MQ=255) aCGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGcc > 2:1906658/1‑78 (MQ=255) aCGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGcc < 1:1906658/78‑1 (MQ=255) aCGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGCCCGGTTGCGGCGTTCGAACAGTTCCACGCCAAGGCTTTCTTCCAGCAGGCGTATTTGGCGGCTCACCGCGCCg > 1:391767/1‑150 (MQ=255) gcgcCTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGCCCGGTTGCGGCGTTCGAACAGTTCCACGCCAAGGCTTTCTTCCAGCAGGCGTATTTGGCGGCTGACCGCGCCgtga < 1:1331990/150‑1 (MQ=255) gccctggAGCTGTTCGAAGACCGCCTGGGTGGTGCCTTCCAGGGCACGACCGGCGGGGGTGAGGAAAATGGCCCGGTTGCGGCGTTCGAAAAGTTGCACGCCAAGGCTTTCTTCCATCGGGCGTATTTGGCGGCTGACCTGGCCgggagg > 2:41300/7‑149 (MQ=255) cTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGCCCGGTTGCGGCGTTCGAACAGTTCCACGCCAAGGCTTTCTTCCAGCAGGCGTATTTggcgg < 1:1751156/131‑1 (MQ=255) cTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGCCCGGTTGCGGCGTTCGAACAGTTCCACGCCAAGGCTTTCTTCCAGCAGGCGTATTTggcgg > 2:1751156/1‑131 (MQ=255) cGAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGCCCGGTTGCGGCGTTCGAACAGTTCCACGCCAAGGCTTTCTTCCAGCAGGCGTATTTGGCGGCTGACCGCGCCGTGAGTGACGt < 2:378701/150‑1 (MQ=255) gAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCgggg < 1:2362251/52‑1 (MQ=255) gAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCgggg > 2:2362251/1‑52 (MQ=255) gCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGa > 1:2293475/1‑41 (MQ=255) gCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGa < 2:2293475/41‑1 (MQ=255) gCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGCCCGGTTGCGGCGTTCGAACAGTTCCACGCCAAGGCTTTCTTCCAGCAGTCGt > 1:1915223/1‑116 (MQ=255) gCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGCCCGGTTGCGGCGTTCGAACAGTTCCACGCCAAGGCTTTCTTCCAGCAGTCGt < 2:1915223/116‑1 (MQ=255) gAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGCCCGGTTGCGGCGTTCGAACAGTTCCACGCCAAGGCTTTCTTCCAGCAGGCGTATTTGGCGGCTGACCGCGCCGTGAGTGACGTGCAAGTGCTc > 1:1127349/1‑150 (MQ=255) gAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGCCCGGTTGCGGCGTTCGAACAGTTCCACGCCAAGGCTTTCTTCCAGCAGGCGTATTTGGCGGCTGACCGCGCCGTGAGTGACGTGCAAGTGCTc > 1:823670/1‑150 (MQ=255) gAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGCCCGGTTGCGGCGTTCGAACAGTTCCACGCCAAGGCTTTCTTCCAGCAGGCGTATTTGGCGGCTGACCGCGCCGTGAGTGACGTGCAAGTGCTc < 1:186021/150‑1 (MQ=255) gAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGACCGGTTGCGGCGTTCGAACAGTTCCACGCCAAGGCTTTCTTCCAGCAGGCGTATTTGGCGGCTGACCGCGCCGTGAGTGACGTGCAAGTGCTc < 2:1335561/150‑1 (MQ=255) aaGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGCCCGGTTgcggc < 1:759700/67‑1 (MQ=255) aaGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGCCCGGTTgcggc > 2:759700/1‑67 (MQ=255) ccTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGCCCGGTTGCGGCGTTCGAAc < 1:1434154/68‑1 (MQ=255) ccTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGCCCGGTTGCGGCGTTCGAAc > 2:1434154/1‑68 (MQ=255) cTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAGATGGCCCGGTTGCGGCGTTCGAACAGTTCCACGCCAAGGCTTTCTTCCAGCAGGCGTATTTGGCGGCTGACCGCGCCgtga < 1:504505/124‑1 (MQ=255) cTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAGATGGCCCGGTTGCGGCGTTCGAACAGTTCCACGCCAAGGCTTTCTTCCAGCAGGCGTATTTGGCGGCTGACCGCGCCgtga > 2:504505/1‑124 (MQ=255) ggtgCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGCCCGGTTGCGGCGTTCGAACAGTTCCACGCCAAGGCTTTCTTCCAGCAGGCGTATTTGGCGGCTGACCGCGCCGTGAGTGACGTGCAAGTGCTCGGCGGCGCGCACGat < 2:1654508/150‑2 (MQ=255) ggtgCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGCCCGGTTGCGGCGTTCGAACAGTTCCACGCCAAGGCTTTCTTCCAGCAGGCGTATTTGGCGGCTGACCGCGCCGTGAGTGACGTGCAAGTGCTCGGCGGCGCGCACGaa < 2:706447/150‑1 (MQ=255) gtgCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGCCCGGTTGCGGCGTTCGAACAGTTCCACGCCAAGGCTTTCTTCCAGCAGGCGTATTTGGCGGCTGACCGCGCCGTGAGTGACGTGCAAGTGCTCGGCGgcgc > 2:1998934/1‑142 (MQ=255) gtgCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGCCCGGTTGCGGCGTTCGAACAGTTCCACGCCAAGGCTTTCTTCCAGCAGGCGTATTTGGCGGCTGACCGCGCCGTGAGTGACGTGCAAGTGCTCGGCGgcgc < 1:1998934/142‑1 (MQ=255) tgCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAACTGGCCCGGTTGCGGCGTTCGAAGAGTTCCCCGCCAGCGCGTGCTTCCAGCAGGCGTATTTGGCGGCTGACCGCGCCGTGAGTGACGTGCAAGTGCTCGGCGGCGCGCACGAAGc > 1:295141/1‑150 (MQ=255) gCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGCCCGGTTGCGGCGTTCGaa < 2:211481/57‑1 (MQ=255) gCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGCCCGGTTGCGGCGTTCGaa > 1:211481/1‑57 (MQ=255) ccTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGCCCGGTTGCGGCGTTCGAACAGTTCCACGCCAAGGCTTTCTTCCAGCAGGCGTATTTGGCGGCTGACCGCGCCGTGAGTGACGTGCAAGTGCTCGGCGGCGCGCACGAAGctc > 2:326169/1‑150 (MQ=255) ttGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGCCCGGTTGCGGCGTTCGAACAGTTCCACGCCAAGGCTTTCTTCCAGCAGGCGTATTTGGCGGCTGACCGCGCCGTGAGTGACGTGCAAGTGCTCGGCGGCGCGCACGAAGCtctc > 1:310328/1‑150 (MQ=255) ttGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGCCCGGTTGCGGCGTTCGAACAGTTCCACGCCAAGGCTTTCTTCCAGCAGGCGTATTTGGCGGCTGACCGCGCCGTGAGTGACGTGCAAGTGCTCGGCGGCGCGCACGAAGCtctc < 2:1065820/150‑1 (MQ=255) | GTGGCATGGAAGCGCGGCAGGCGCGGGATCAGCCAGCGCATGGCGATGGTCGGTTCGCAAGACAGCACCAGCACATTGTCGCGAGCTTGTTGCTGCAGGCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGCCCGGTTGCGGCGTTCGAACAGTTCCACGCCAAGGCTTTCTTCCAGCAGGCGTATTTGGCGGCTGACCGCGCCGTGAGTGACGTGCAAGTGCTCGGCGGCGCGCACGAAGCTCTC > NC_002947/811905‑812200 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |