| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 850,994 | C→G | 5.6% | intergenic (‑574/‑231) | pcs ← / → hemA | phosphatidylcholine synthase/glutamyl‑tRNA reductase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 850,994 | 0 | C | G | 5.6% | 287.1 / 7.0 | 90 | intergenic (‑574/‑231) | pcs/hemA | phosphatidylcholine synthase/glutamyl‑tRNA reductase |
| Reads supporting (aligned to +/- strand): ref base C (44/41); new base G (3/2); total (47/43) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.62e-01 | |||||||||||
TCTGGCTTTTGCTCTTACTGTCGCTTCTAAGCGCGCGGTTGATCAGGCGCTGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTCGGGCACAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTGCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAGGATCAAAAGCCAGATCAAAAGCCGGCAAGACCTGAAAACACCGCTAGGGCAGGCTACGAAAAGGCGATAGCCGCTGCGCTAT > NC_002947/850850‑851142 | tctGGCTTTTGCTCTTACTGTCGCTTCTAAGCGCGCGGTTGATCAGGCGCTGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTCGGGCACAGCGCTTGACGGGCATCCATGc > 1:438779/1‑150 (MQ=255) cTTTTGCTCTTACTGTCGCTTCTAAGCGCGCGGTTGATCAGGCGCTGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTCGGGCACAGCGCTTGACGGGCATCCATGCCCGTc < 2:2344738/150‑1 (MQ=255) ttACTGTCGCTTCTAAGCGCGCGGTTGATCAGGCGCTGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTCGGGCACAGCGCTTGACGGGCATCCATGc < 2:573294/136‑1 (MQ=255) ttACTGTCGCTTCTAAGCGCGCGGTTGATCAGGCGCTGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTCGGGCACAGCGCTTGACGGGCATCCATGc > 1:573294/1‑136 (MQ=255) ttACTGTCGCTTCTAAGCGCGCGGTTGATCAGGCGCTGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTCGGGCACAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTg > 2:1362322/1‑150 (MQ=255) tGTCGCTTCTAAGCGCGCGGTTGATCAGGCGCTGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTCGGGCACAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTGCGCa > 2:2243612/1‑150 (MQ=255) tGTCGCTTCTAAGCGCGCGGTTGATCAGGCGCTGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTCGGGCACAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTGCGCa > 2:111816/1‑150 (MQ=255) gTCGCTTCTAAGCGCGCGGTTGATCAGGCGCTGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTCGGGCACAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTGCGCaa > 1:714866/1‑150 (MQ=255) tCGCTTCTAAGCGCGCGGTTGATCAGGCGCTGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTCGGGCACAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTGCGCAAg > 1:1185538/1‑150 (MQ=255) gCTTCTAAGCGCGCGGTTGATCAGGCGCTGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTCGGGCACAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTGCGCAAGGc > 2:1383271/1‑150 (MQ=255) cTAAGCGCGCGGTTGATCAGGCGCTGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTCGGGCACAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTGCGCAAGGCCTGc < 2:2028144/150‑1 (MQ=255) gcgcgcGGTTGATCAGGCGCTGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTCGGGCACAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTGCGCAAGGCCTGCGTTc < 1:2207396/150‑1 (MQ=255) tgatcttGATCAGGCGCTGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTCGGGCACAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTGCGCAAGGCCTGCGTTCGGc > 2:2390423/6‑150 (MQ=255) ggTTGATCAGGCGCTGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTCGGGCACAGCGCTTGACGGGCATGGATGCCCGTCaa < 2:2186632/121‑2 (MQ=255) ggTTGATCAGGCGCTGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTCGGGCACAGCGCTTGACGGGCATGGATGCCCGTCaa > 1:2186632/1‑120 (MQ=255) gTTGATCAGGCGCTGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTCGGGCACAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTGCGCAAGGCCTGCGTTCGGcctcc > 1:2087738/1‑150 (MQ=255) ttGATCAGGCGCTGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTCGGGCACAGCGCTTGACGGGCCTCCATGCCCGTCACCTCCCTGCGCAAGGCCTGCGATCGGcctcct > 1:975297/1‑150 (MQ=255) tCAGGCGCTGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTCGGGCACAGCGCTTGACGGGCATGGATGCCCGt > 1:1303049/1‑112 (MQ=255) tCAGGCGCTGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTCGGGCACAGCGCTTGACGGGCATGGATGCCCGt < 2:1303049/112‑1 (MQ=255) tCAGGCGCTGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTCGGGCACAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTGCGCAAGGCCTGCGTTCGGCCTCCTGAAg > 2:1336904/1‑150 (MQ=255) tCAGGCGCTGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTCGGGCACAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTGCGCAAGGCCTGCGTTCGGCCTCCTGAAg > 2:124098/1‑150 (MQ=255) gcgcTGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTCGGGCACAGCGCTTAACGGTCATCCCTGCCCGTCACATCCCTGCGCAAGGCCTGCGTTCGGCCTCCTGAAGTcgc < 1:1261041/150‑1 (MQ=255) cTGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTCGGGCGCAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTGCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaa < 1:1968809/150‑1 (MQ=255) tGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTCGGGCACAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTGCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaag > 1:202121/1‑150 (MQ=255) gACTTCAGGAGGCCGAGCGTAGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTCGGGCACAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTGCGCAAGGCCTGCGTTCGGcctc < 2:2309523/126‑1 (MQ=255) gACTTCAGGAGGCCGAGCGTAGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTCGGGCACAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTGCGCAAGGCCTGCGTTCGGcctc > 1:2309523/1‑126 (MQ=255) gACTTCAGGAGGCCGAGCGTAGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTCGGGCACAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTGCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAagatcaagatca < 2:1051381/150‑1 (MQ=255) gACTTCAGGAGGCCGAGCGTAGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTCGGGCACAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTGCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAagatcaagatca < 1:2390423/150‑1 (MQ=255) gACTTCAGGAGGCCGAGCGTAGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTCGGGCACAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTGCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAagatcaagatca < 2:2087738/150‑1 (MQ=255) cTTCAGGAGGCCGAGCGTAGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTCGGGCACAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTGCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAgg < 2:438779/150‑1 (MQ=255) ttCAGGAGGCCGAGCGTAGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTCGGGCACAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTGCGCAAGGc > 1:243057/1‑109 (MQ=255) ttCAGGAGGCCGAGCGTAGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTCGGGCACAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTGCGCAAGGc < 2:243057/109‑1 (MQ=255) ttCAGGAGGCCGAGCGTAGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTCGGGCACAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTGCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAGGa < 1:380870/150‑1 (MQ=255) tCAGGAGGCCGAGCGTAGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTCGGGCACAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTGCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAGGAt < 2:714866/150‑1 (MQ=255) cGAGCGTAGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTCGGGCACAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTGCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAGGATCAAAAGCCa > 1:1671851/1‑150 (MQ=255) gAGCGTAGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTCGGGCACAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTGCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAGGATCAAAAGCCAg < 1:124098/150‑1 (MQ=255) gAGCGTAGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTCGGGCACAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTGCGCAAGCACGGTTTGCGGCCTCCTGAAGTCGCGAAGATCAAGATCAGGATCAAAAGCCAg > 1:760179/1‑150 (MQ=21) aGCGTAGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTCGGGCACAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTGCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAGGATCAAAAGCCAGa < 2:567067/150‑1 (MQ=255) aGCGTAGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTCGGGCACAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTGCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAGGATCAAAAGCCAGa < 1:2243612/150‑1 (MQ=255) gCGTAGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTCGGGCACAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTGCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAGGATCAAAAGCCAGAt < 1:1336904/150‑1 (MQ=255) aGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTCGGGCACAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTGCGCAAGGCCTGCGTTCg > 1:127222/1‑101 (MQ=255) aGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTCGGGCACAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTGCGCAAGGCCTGCGTTCg < 2:127222/101‑1 (MQ=255) aGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTCGGGCACAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTGCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAGGATCAAAAGCCAGATCaaa > 1:1862737/1‑150 (MQ=255) ggCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTCGGGCACAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTGCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAGGATCAAAAGCCAGATCAAAAg > 2:43683/1‑150 (MQ=255) cTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTCGGGCACAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTGCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAGGATCAAAAGCCAGATCAAAAGcc > 1:236563/1‑150 (MQ=255) gCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTCGGGCACAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTGCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAGGATCAAAAGCCAGATCAAAAGCCGGc < 2:236563/150‑1 (MQ=255) cTCCCGGGAGAACCGCGCTGCAGGCCCCATCCTCGGGCACAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTGCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAGGATCAAAAGCCAGATCAAAAGCCGGCa > 1:2133605/1‑150 (MQ=255) tCCCGGGAGGACCGCGCTGCAGGCCCCATCCTCGGGCACAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTGCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATTAAGATCAGGATCAAAAGCCAGATCAAAAGCCGGCaa > 1:508949/1‑150 (MQ=255) ccGGGAGGACCGCGCTGCAGGCCCCATCCTCGGGCACAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGGCCTGc < 2:2394188/85‑1 (MQ=255) ccGGGAGGACCGCGCTGCAGGCCCCATCCTCGGGCACAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTGCGCAAGGCCTGc > 1:2394188/1‑85 (MQ=255) ccGGGAGGACCGCGCTGCAGGCCCCATCCTCGGGCACAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTGCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAGGATCAAAAGCCAGATCAAAAGCCGGCAAGa > 2:52954/1‑150 (MQ=255) ccGGGAGGACCGCGCTGCAGGCCCCATCCTCGGGCACAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTGCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAGGATCAAAAGCCAGATCAAAAGCCGGCAAGa > 2:2155918/1‑150 (MQ=255) ccGGCAGCACCGCTCTGCAGGCCCAATCCTCGGGCACAGCTCTTGACGGGCATCCATGCCCATCACCTCCCCGCGCAAGGCCTGCGTTCGACCTCCTGAAGTGGCGAAGATCAAGATGAGGATCAAAAGCCAGATCAAAAGCCGGCAAGa < 2:1570163/150‑1 (MQ=21) ggaggaCCGCGCTGCAGGCCCCATCCTCGGGCACAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTGCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAGGATCAAAAGCCAGATCAAAAGCCGGCAAGACCt < 2:1862737/150‑1 (MQ=255) cgcgCTGCAGGCCCCATCCTCGGGCACAGCGCTTGACGGGCATCCATNCCCGTCACCTCCCTGCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatca > 1:810264/1‑103 (MQ=255) cgcgCTGCAGGCCCCATCCTCGGGCACAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTGCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatca < 2:810264/103‑1 (MQ=255) gcgcTGCAGGCCCCATCCTCGGGCACAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTGCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAGGATCAAAAGCCAGATCAAAAGCCGGCAAGACCTGAAAacac < 2:1185538/150‑1 (MQ=255) cgcTGCAGGCCCCATCCTCGGGCACAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTGCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAGGATCAAAAGCCAGATCAAAAGCCGGCAAGACCTGAAAACAcc < 1:52954/150‑1 (MQ=255) gcTGCAGGCCCCATCCTCGGGCACAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTGCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAGGATCAAAAGCCAGATCAAAAGCCGGCAAGACCTGAAAACACCg < 2:202121/150‑1 (MQ=255) tGCAGGCCCCATCCTCGGGCACAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTGCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAGGATCAAAAGCCAGATCAAAAGCCGGCAAGACCTGaaaa < 2:290934/143‑1 (MQ=255) tGCAGGCCCCATCCTCGGGCACAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTGCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAGGATCAAAAGCCAGATCAAAAGCCGGCAAGACCTGaaaa > 1:290934/1‑143 (MQ=255) tGCAGGCCCCATCCTCGGGCACAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTGCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAGGATCAAAAGCCAGATCAAAAGCCGGCAAGACCTGAAAACACCGCt > 1:1338843/1‑150 (MQ=255) ccccATCCTCGGGCACAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTGCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatc > 2:546858/1‑97 (MQ=255) ccccATCCTCGGGCACAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTGCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatc < 1:546858/97‑1 (MQ=255) ccccATCCTCGGGCACAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTGCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAGGATCAAAAGCCAGATCAAAAGCCGGCAAGACCTGAAAACACCGCTAGGGCa < 1:2155918/150‑1 (MQ=255) ccATCCTCGGGCACAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTGCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAGGATCAAAAGCCAGATCAAAAGCCGGCAAGACCTGAAAACACCGCTa > 1:409599/1‑143 (MQ=255) ccATCCTCGGGCACAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTGCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAGGATCAAAAGCCAGATCAAAAGCCGGCAAGACCTGAAAACACCGCTa < 2:409599/143‑1 (MQ=255) cATCCTCGGGCACAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTGCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatc < 2:2335528/88‑1 (MQ=255) cATCCTCGGGCACAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTGCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatc > 1:2335528/1‑88 (MQ=255) tCCTCGGGCACAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTGCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaaga > 1:1558186/1‑90 (MQ=255) tCCTCGGGCACAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTGCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaaga < 2:1558186/90‑1 (MQ=255) cTCGGGCACAGCGCTTGACGGGCATCCATGCGCGTCACCTCCCTGCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAGGATCAAAAGCCAGa > 2:1486681/1‑106 (MQ=255) cTCGGGCACAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTGCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAGGATCAAAAGCCAGa < 1:1486681/106‑1 (MQ=255) cTCGGGCACAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTGCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAGGATCAAAAGCCAGATCAAAAGCCGGCAAGACCTGAAAACACCGCTAGGGCAGGCTACg > 1:1953176/1‑150 (MQ=255) tCGGGCACAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTGCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAGGATCAAAAGCCAGATCAAAAGCCgg > 2:1530780/1‑116 (MQ=255) tCGGGCACAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTGCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAGGAGCAAAAGCCAGATCAAAAGCCgg < 1:1530780/116‑1 (MQ=255) cacaGCGCTTGACGGGCATCCATGCCCCTCACCTCCCTGCTCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAGGATCAAAAGCCAGATCAAAAGCCGGCAAGACCTGAAAACACCGCTAGGGCAGGCTACGAAAAgg < 1:1362322/150‑1 (MQ=255) acaGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTGCGCAAGGCCTGCGTTCGGCCTCCTGAAGTcgc > 2:1158973/1‑70 (MQ=255) acaGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTGCGCAAGGCCTGCGTTCGGCCTCCTGAAGTcgc < 1:1158973/70‑1 (MQ=255) acaGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTGCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAGGATCAAAAGCCAGATCAAAAGCCGGCAAGACCTGAAAACACCGCTAGGGCAGGCTACGAAAAGGc > 1:1668795/1‑150 (MQ=255) aGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTGCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAGGATCAAAAGCCAGATCAAAAGCCGGCAAGACCTGAAAACACCGCTAGGGCAGGCTACGAAAAGGCGa < 1:1383271/150‑1 (MQ=255) gcTTGACGGGCATCCATGCCCGTCACCTCCCTGCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAGGATCAAAAGCCAGATCAAAAGCCGGCAAGACCTGAAAACACCGCTAGGGCAGGCTACGAAAAGGCGATAg > 2:1489268/1‑150 (MQ=255) tGACGGGCATGGATGCCCGTCACCTCCCTGCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAGGATCAAAAGCCAGATCAAAAGCCGGCAAGACCTGAAAACACCGCTAGGGCAGGCTACGAAAAGGCGATAGCCg > 2:651354/1‑150 (MQ=255) gggCATCCATGCCCGTCACCTCCCTGCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAGGATCAAAAGCCAGATCAAAAGCCGGCAAGACCTGAAAacac < 2:2396335/114‑1 (MQ=255) gggCATCCATGCCCGTCACCTCCCTGCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAGGATCAAAAGCCAGATCAAAAGCCGGCAAGACCTGAAAacac > 1:2396335/1‑114 (MQ=255) gggCATCCATGCCCGTCACCTCCCTGCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAGGATCAAAAGCCAGATCAAAAGCCGGCAAGACCTGAAAACACCGCTAGGGCAGGCTACGAAAAGGCGATAGCCGCTgc > 2:678511/1‑150 (MQ=255) gCATCCATGCCCGTCACCTCCCTGCGCAAGGCCTGCGTTCGACCTCCTGAAGTCGCGAAGATCAAGATCAGGATCAAAAGCCAGATCAAAAGCCGGCAAGACCTGAAAACACCGCTAGGGCAGGCTACGAAAAGGCGATAGCCGCTgcgc > 1:1588822/1‑150 (MQ=255) tCCATGCCCGTCACCTCCCTGCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAGGATCAAAAGCCAGATCAAAAGCCGGCAAGACCTGAAAACACCGCTAGGGCAGGCTACGAAAAGGCGATAGCCGCTgc < 2:400109/145‑1 (MQ=255) tCCATGCCCGTCACCTCCCTGCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAGGATCAAAAGCCAGATCAAAAGCCGGCAAGACCTGAAAACACCGCTAGGGCAGGCTACGAAAAGGCGATAGCCGCTgc > 1:400109/1‑145 (MQ=255) tCCATGCCCGTCACCTCCCTGCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAGGATCAAAAGCCAGATCAAAAGCCGGCAAGACCTGAAAACACCGCTAGGGCAGGCTACGAAAAGGCGATAGCCGCTGCGCTAt < 2:1671851/150‑1 (MQ=255) | TCTGGCTTTTGCTCTTACTGTCGCTTCTAAGCGCGCGGTTGATCAGGCGCTGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTCGGGCACAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTGCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAGGATCAAAAGCCAGATCAAAAGCCGGCAAGACCTGAAAACACCGCTAGGGCAGGCTACGAAAAGGCGATAGCCGCTGCGCTAT > NC_002947/850850‑851142 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |