Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 894,394 C→T 6.0% G115G (GGC→GGT slyD → FKBP‑type peptidyl‑prolyl cis‑trans isomerase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_002947894,3940CT 6.0% 252.0 / 4.3 83G115G (GGC→GGTslyDFKBP‑type peptidyl‑prolyl cis‑trans isomerase
Reads supporting (aligned to +/- strand):  ref base C (39/39);  new base T (2/3);  total (41/42)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.76e-01

GCCTACGGCGAGTACCTGGCCGAACTGGTCAGCACCCTGAACCGTAGCCTGTTCGAAGGTGTCGACGAGCTGGAAGTGGGCATGCAGTTCCACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAGGTTGTGAACGTGCGTGACGCCAGCGACGAAGAAATCGCTCACCGTCACATCCACGGTGAAGGTGGCCATCACCACTGATTTTCTGC  >  NC_002947/894248‑894543
                                                                                                                                                  |                                                                                                                                                     
gCCTACGGCGAGTACCTGGCCGAACTGGTCAGCACCCTGAACCGTAGCCTGTTCGAAGGTGTCGACGAGCTGGAAGTGGGCATGCAGTTCCACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACCTCGACGGcgac                                                                                                                                                    <  2:34577/150‑1 (MQ=255)
  cTACGGCGAGTACCTGGCCGAACTGGTCAGCACCCTGAACCGTAGCCTGTTCGAAGGTGTCGACGAGCTGGAAGTGGGCATGCAGTTCCACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGcgacga                                                                                                                                                  >  2:2052596/1‑150 (MQ=255)
         gAGTACCTGGCCGAACTGGTCAGCACCCTGAACCGTAGCCTGTTCGAAGGTGTCGACGAGCTGGAAGTGGGCATGCAGTTCCACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCAcc                                                                                                                                           >  1:1334992/1‑150 (MQ=255)
           gTACCTGGCCGAACTGGTCAGCACCCTGAACCGAGTCCTGTTCGAAGGTGTCGACGAGCTGGAAGTGGGCATGCAGTTCCACGATTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGt                                                                                                                                         >  1:2370970/1‑150 (MQ=255)
               cTGGCCGAACTGGTCAGCACCCTGAACCGTAGCCTGTTCGAAGGTGTCGACGAGCTGGAAGTGGGCATGCAGTTCCACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCgacgac                                                                                                                                                 >  2:974527/1‑138 (MQ=255)
               cTGGCCGAACTGGTCAGCACCCTGAACCGTAGCCTGTTCGAAGGTGTCGACGAGCTGGAAGTGGGCATGCAGTTCCACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCgacgac                                                                                                                                                 <  1:974527/138‑1 (MQ=255)
               cTGGCCGAACTGGTCAGCACCCTGAACCGTAGCCTGTTCGAAGGTGTCGACGAGCTGGAAGTGGGCATGCAGTTCCACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCAGCGAGCCGGACGGTGACGTCGTCGCCGTCGAt                                                                                                                                     <  1:1268899/150‑1 (MQ=255)
                    cGAACTGGTCAGCACCCTGAACCGTAGCCTGTTCGAAGGTGTCGACGAGCTGGAAGTGGGCATGCAGTTCCACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGTGACGTCGTCGCCGTCGATgtcgc                                                                                                                                <  1:525592/150‑5 (MQ=255)
                    cGAACTGGTCAGCACCCTGAACCGTAGCCTGTTCGAAGGTGTCGACGAGCTGGAAGTGGGCATGCAGTTCCACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATgtcgc                                                                                                                                <  1:944033/150‑5 (MQ=255)
                     gAACTGGTCAGCACCCTGAACCGTAGCCTGTTCGAAGGTGTCGACGAGCTGGAAGTGGGCATGCAGTTCCACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAac                                                                                                                               <  1:736390/150‑1 (MQ=255)
                     gAACTGGTCAGCACCCTGAACCGTAGCCTGTTCGAAGGTGTCGACGAGCTGGAAGTGGGCATGCAGTTCCACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAac                                                                                                                               >  1:474354/1‑150 (MQ=255)
                      aaCTGGTCAGCACCCTGAACCGTAGCCTGTTCGAAGGTGTCGACGAGCTGGAAGTGGGCATGCAGTTCCACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAacc                                                                                                                              >  1:754761/1‑150 (MQ=255)
                           gTCAGCACCCTGAACCGTAGCCTGTTCGAAGGTGTCGACGAGCTGGAAGTGGGCATGCAGTTCCACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAAccaccca                                                                                                                         >  1:978431/1‑150 (MQ=255)
                               gCACCCTGAACCGTAGCCTGTTCGAAGGTGTCGACGAGCTGGAAGTGGGCATGCAGTTCCACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTgg                                                                                                                     >  1:543153/1‑150 (MQ=255)
                                  cccTGAACCGTAGCCTGTTCGAAGGTGTCGACGAGCTGGAAGTGGGCATGCAGTTCCACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCg                                                                                                                  <  2:474354/150‑1 (MQ=255)
                                       aaCCGTAGCCTGTTCGAAGGTGTCGACGAGCTGGAAGTGGGCATGCAGTTCCACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAg                                                                                                             >  1:111018/1‑150 (MQ=255)
                                        aCCGTAGCCTGGTCGAAGGTGTCGACGAGCTGGAAGTGGGCATGCAGTTCCACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAgc                                                                                                            <  2:1062309/150‑1 (MQ=255)
                                              gCCTGTTCGAAGGTGTCGACGAGCTGGAAGTGGGCATGCAGTTCCACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGa                                                                                                      >  1:208204/1‑150 (MQ=255)
                                               ccTGTTCGAAGGTGTCGACGAGCTGGAAGTGGGCATGCAGTTCCACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAgcgc                                                                                                          >  2:234973/1‑145 (MQ=255)
                                               ccTGTTCGAAGGTGTCGACGAGCTGGAAGTGGGCATGCAGTTCCACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAgcgc                                                                                                          <  1:234973/145‑1 (MQ=255)
                                                cTGTTCGAAGGTGTCGACGAGCTGGAAGTGGGCATGCAGTTCCACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGAcc                                                                                                    >  2:557210/1‑150 (MQ=255)
                                                 tGTTCGAAGGTGTCGACGAGCTGGAAGTGGGCATGCAGTTCCACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCt                                                                                                   >  2:2266037/1‑150 (MQ=255)
                                                 tGTTCGAAGGTGTCGACGAGCTGGAAGTGGGCATGCAGTTCCACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCt                                                                                                   >  2:1162258/1‑150 (MQ=255)
                                                   ttCGAAGGTGTCGACGCGCTGGAAGTGGGCATGCAGTTCCACGCTTCGGCGCCCGACGGCCAGATGCACATGTTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTc                                                                                                 <  1:286730/150‑1 (MQ=255)
                                                     cGAAGGTGTCGACGAGCTGGAAGTGGGCATGCAGTTCCACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCa                                                                                               <  2:1273117/150‑1 (MQ=255)
                                                     cGAAGGTGTCGACGAGCTGGAAGTGGGCATGCAGTTCCACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCa                                                                                               <  1:2052596/150‑1 (MQ=255)
                                                      gAAGGTGTCGTCGAGCTGGAAGTGGGCATGCAGTTCCACGCTTCGGCGACGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCATCGTTTATGGTAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAg                                                                                              <  1:2363172/150‑1 (MQ=255)
                                                        aGGTGTCGACGAGCTGGAAGTGGGCATGCAGTTCCACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGt                                                                                            >  2:1920655/1‑150 (MQ=255)
                                                            gtCGACGAGCTGGAAGTGGGCATGCAGTTCCACGCTTCGGCGCCGGTCGCCCAGATGCAGATCGCCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTGGAAGGTCagg                                                                                        <  1:2119115/150‑3 (MQ=255)
                                                            gtCGACGAGCTGGAAGTGGGCATGCAGTTCCACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCacg                                                                                        <  2:2212556/150‑3 (MQ=255)
                                                             tCGACGAGCTGGAAGTGGGCATGCAGTTCCACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGACAGCGTTGTGTGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAgg                                                                                       >  2:65488/1‑150 (MQ=255)
                                                               gacgaGCTGGAAGTGGGCATGCAGTTCCACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAGGtt                                                                                     >  2:1827854/1‑150 (MQ=255)
                                                                       ggAAGTGGGCATGCAGTTCCACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAGGTTGTGAAcgt                                                                             <  2:543153/150‑1 (MQ=255)
                                                                        gAAGTGGGCATGCAGTTCCACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAGGTTGTGAAcgtg                                                                            >  1:1571510/1‑150 (MQ=255)
                                                                            tGGGCACGCAGTTCCACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGcc                                                                                                                   <  1:357456/107‑1 (MQ=255)
                                                                            tGGGCACGCAGTTCCACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGcc                                                                                                                   >  2:357456/1‑107 (MQ=255)
                                                                             gggCATGCAGTTCCACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAGGTTGTGAACGTGCGTGa                                                                       >  2:954508/1‑150 (MQ=255)
                                                                              ggCATGCAGTTCCACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAacca                                                                                                                             >  1:2396930/1‑95 (MQ=255)
                                                                              ggCATGCAGTTCCACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTCATGGCAacca                                                                                                                             <  2:2396930/95‑1 (MQ=255)
                                                                                cATGCAGTTCCACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAGGTTGTGAACGTGCGTGACGc                                                                    <  1:1920655/150‑1 (MQ=255)
                                                                                  tGCAGTTCCACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATgg                                                                                                                                   >  1:2367975/1‑85 (MQ=255)
                                                                                  tGCAGTTCCACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATgg                                                                                                                                   <  2:2367975/85‑1 (MQ=255)
                                                                                  tGCAGTTCCACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAGGTTGTGAACGTGCGTGACGCCa                                                                  <  2:1571510/150‑1 (MQ=255)
                                                                                   gCAGTTCCACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAgc                                                                                                            <  1:832415/107‑1 (MQ=255)
                                                                                   gCAGTTCCACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAgc                                                                                                            >  2:832415/1‑107 (MQ=255)
                                                                                   gCAGTTCCACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAGGTTGTGAACGTGCGTGAc                                                                      <  1:2392214/145‑1 (MQ=255)
                                                                                   gCAGTTCCACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGAGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAGGTTGTGAACGTGCGTGAc                                                                      >  2:2392214/1‑145 (MQ=255)
                                                                                    taGTTCCACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAGGTTGTGAACGTGCGTGACGCCAGc                                                                <  1:1717447/149‑1 (MQ=255)
                                                                                    cAGTTCCACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAGGTTGTGAACGTGCGTGACGCCAGc                                                                <  2:2334738/150‑1 (MQ=255)
                                                                                          cACGCTTCGGCGCCGGACGGTCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAGGTTGTGAACGTGCGTGACGCCAGCGACgaa                                                          <  1:341130/150‑1 (MQ=255)
                                                                                          cACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAGGTTGTGAACGTGCGTGACGCCAGCGACgaa                                                          <  1:954508/150‑1 (MQ=255)
                                                                                           aCGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCa                                                                                               <  2:2252004/112‑1 (MQ=255)
                                                                                           aCGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCa                                                                                               >  1:2252004/1‑112 (MQ=255)
                                                                                               ttCGGCGCCGGACGGCGGGCTGCCAGTGGTGACCGCCCGCAACAGCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAGGTTGTGAACGTGCGTGACGCCAGCGACGAAGAAAt                                                     <  2:264454/150‑1 (MQ=255)
                                                                                               ttCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAGGTTGTGAACGTGCGTGACGCCAGCGACGAAGAAAt                                                     >  1:264454/1‑150 (MQ=255)
                                                                                                     gcCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAaccacc                                                                                                                           <  1:2257674/74‑1 (MQ=255)
                                                                                                     gcCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAaccacc                                                                                                                           >  2:2257674/1‑74 (MQ=255)
                                                                                                       cGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAGGTTGTGAACGTGCGTGACGCCAGCGACGAAGAAATCGCTCAcc                                             <  2:208204/150‑1 (MQ=255)
                                                                                                              ccAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCGACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAGGTTGTGAACGTGCGTGACGCCAGCGACGAAGAAATCGCTCACCGTCACAt                                      >  1:2190708/1‑150 (MQ=255)
                                                                                                              ccAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCAACGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAGGTTGTGAACGTGCGTGACGCCAGCGACGAAGAAATCGCTTACCGTCACAt                                      >  1:372501/1‑150 (MQ=255)
                                                                                                               cAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAGGTTGTGAACGTGCGTGACGCCAGCGACGAAGAAATCGCTCACCGTCACATc                                     <  2:754761/150‑1 (MQ=255)
                                                                                                                aGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAGGTTGTGAACGTGCGTGACGCCAGCGACGAAGAAATCGCTCACCGTca                                         >  1:1082347/1‑145 (MQ=255)
                                                                                                                aGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAGGTTGTGAACGTGCGTGACGCCAGCGACGAAGAAATCGCTCACCGTca                                         <  2:1082347/145‑1 (MQ=255)
                                                                                                                  aTGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAGGTTGTGAACGTGCGTGACGCCAGCCACTAAGAAATCGCTCACCGTCACATCCAc                                  <  1:65488/150‑1 (MQ=255)
                                                                                                                   tGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAGGTTGTGCACATGCGTGACGCCAGCGACGAAGAAATCGCTCACCGTCACATCCACg                                 <  1:1162258/150‑1 (MQ=255)
                                                                                                                    gCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAGGTTGTGAACGTGCGTGACGCCAGCGACGAAGAAATCGCTCACCGTCACATCCACgg                                <  1:2237687/150‑1 (MQ=255)
                                                                                                                       gATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCACGGTtgt                                                                                   <  2:1844495/96‑1 (MQ=255)
                                                                                                                       gATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAGGTtgt                                                                                   >  1:1844495/1‑96 (MQ=255)
                                                                                                                       gATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAGGTTGTGAACGTGCGTGACGCCAGCGACGAAGAAATCGCTCACCGTCACATCCACgg                                >  1:1094902/1‑147 (MQ=255)
                                                                                                                       gATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAGGTTGTGAACGTGCGTGACGCCAGCGACGAAGAAATCGCTCACCGTCACATCCACgg                                <  2:1094902/147‑1 (MQ=255)
                                                                                                                       gATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAGGTTGTGAACGTGCGTGACGCCAGCGACGAAGAAATCGCTCACCGTCACATCCACGGTGa                             >  2:41371/1‑150 (MQ=255)
                                                                                                                        aTCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAGGTTGTGAACGTGCGTGACGCCAGCGACGAAGAAATCGCTCACCGTCACATCCACGGTGaa                            >  2:2357213/1‑150 (MQ=255)
                                                                                                                              aCCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAGGTTGTGAACGTGCGTGACGCCAGCGACGAAGAAATCGCTCACCGTCACATCCACGGTGAAGGTGGc                      >  1:1568017/1‑150 (MQ=255)
                                                                                                                               ccATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAGGTTGTGAACGTGCGTGACGCCAGCGACGAAGAAATCGCTCACCGTCACATCCACGGTGAAGGTGGcc                     <  1:1827854/150‑1 (MQ=255)
                                                                                                                                cATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAGGTTGTGAACGTGCGTGACGCCAGCGACGAAGAAATCGCTCACCGTCACATCCACGGTGAAGGTGGCCa                    >  1:2384027/1‑150 (MQ=255)
                                                                                                                                  tCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAGGTTGTGAACGTGCGTGACGCCAGCGACGAAGAAATCGCTCACCGTCACATCCACGGTGAAGGTGGCCATc                  >  1:2284835/1‑150 (MQ=255)
                                                                                                                                     gcgACATCGACGGCGACGACGTCACCGTTGATGGCAACCACACACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAGGTTGTGAACGTGCGTGACGCCAGCGACGAAGAAATCGCTCACCGTCACATCCACGGTGAAGGTGGCCATcacc               >  1:2359232/1‑150 (MQ=255)
                                                                                                                                         cATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAGGTTGTGAACGTGCGTGACGCCAGCGACGAAGAAATCGCTCACCGTCACATCCACGGTGAAGGTGGCCATCACCACTg           >  2:336142/1‑150 (MQ=255)
                                                                                                                                         cATCAACGGTGACGTCGTCGCCGTCGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAGGTTGTGAACGTGCGTGACGCCAGCGACGAAGAAATCGCTCACCGTCACATCCACGGTGAAGGTGGCCATCACCACTg           >  2:122243/1‑150 (MQ=255)
                                                                                                                                            cGACGGCGACGACGTCACCGTTGATGGCAACCACCTACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAGGTTGTGAACGTGCGTGACGCCAGCGACGAAGAAATCGCTCACCGTCACATCCACGGTGAAGGTGGCCATCACCACTGAtt        <  2:2370970/150‑1 (MQ=255)
                                                                                                                                             aaCGGTGACGTCGTCGCCGTCGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAGGTTGTGAACGTGCGTGACGCCAGCGACGAAGAAATCGCTCACCGTCACATCCACg                                 <  2:1694125/123‑1 (MQ=255)
                                                                                                                                             aaCGGTGACGTCGTCGCCGTCGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAGGTTGTGAACGTGCGTGACGCCAGCGACGAAGAAATCGCTCACCGTCACATCCACg                                 >  1:1694125/2‑124 (MQ=255)
                                                                                                                                              aCGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAGGTTGTGAACGTGCGTGACGCCAGCGACGAAGAAATCGCTCACCGTCACATCCACGGTGAAGGTGGCCATCACCACTGAtttt      >  1:458605/1‑150 (MQ=255)
                                                                                                                                                ggCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAGGTTGTGAACGTGCGTGACGCCAGCGACGAAGAAATCGCTCACCGTCACATCCACGGTGAAGGTGGCCATCACCACTGATTTTCt    <  1:514497/150‑1 (MQ=255)
                                                                                                                                                 gCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAGGTTGTGAACGTGCGTGACGCCAGCGACGAAGAAATCGCTCACCGTCACATCCACGGTGAAGGTGGCCATCACCACTGATTTTCTg   <  2:2384027/150‑1 (MQ=255)
                                                                                                                                                  cgacgaCGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAGGTTGTGAACGTGCGTGACGCCAGCGACGAAGAAATCGCTCACCGTCACATCCACGGTGAAGGTGGCCATCACCACTGATTTTCTgc  <  2:2284835/150‑1 (MQ=255)
                                                                                                                                                  |                                                                                                                                                     
GCCTACGGCGAGTACCTGGCCGAACTGGTCAGCACCCTGAACCGTAGCCTGTTCGAAGGTGTCGACGAGCTGGAAGTGGGCATGCAGTTCCACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAGGTTGTGAACGTGCGTGACGCCAGCGACGAAGAAATCGCTCACCGTCACATCCACGGTGAAGGTGGCCATCACCACTGATTTTCTGC  >  NC_002947/894248‑894543

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: