Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 894,399 A→T 6.2% D117V (GAC→GTC)  slyD → FKBP‑type peptidyl‑prolyl cis‑trans isomerase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_002947894,3990AT 6.2% 253.4 / 5.9 81D117V (GAC→GTC) slyDFKBP‑type peptidyl‑prolyl cis‑trans isomerase
Reads supporting (aligned to +/- strand):  ref base A (38/38);  new base T (2/3);  total (40/41)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.50e-01

CTACGGCGAGTACCTGGCCGAACTGGTCAGCACCCTGAACCGTAGCCTGTTCGAAGGTGTCGACGAGCTGGAAGTGGGCATGCAGTTCCACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAGGTTGTGAACGTGCGTGACGCCAGCGACGAAGAAATCGCTCACCGTCACATCCACGGTGAAGGTGGCCATCACCACTGATTTTCTGCGC  >  NC_002947/894250‑894545
                                                                                                                                                     |                                                                                                                                                  
cTACGGCGAGTACCTGGCCGAACTGGTCAGCACCCTGAACCGTAGCCTGTTCGAAGGTGTCGACGAGCTGGAAGTGGGCATGCAGTTCCACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGcgacga                                                                                                                                                    >  2:2052596/1‑150 (MQ=255)
       gAGTACCTGGCCGAACTGGTCAGCACCCTGAACCGTAGCCTGTTCGAAGGTGTCGACGAGCTGGAAGTGGGCATGCAGTTCCACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCAcc                                                                                                                                             >  1:1334992/1‑150 (MQ=255)
         gTACCTGGCCGAACTGGTCAGCACCCTGAACCGAGTCCTGTTCGAAGGTGTCGACGAGCTGGAAGTGGGCATGCAGTTCCACGATTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGt                                                                                                                                           >  1:2370970/1‑150 (MQ=255)
             cTGGCCGAACTGGTCAGCACCCTGAACCGTAGCCTGTTCGAAGGTGTCGACGAGCTGGAAGTGGGCATGCAGTTCCACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCgacgac                                                                                                                                                   >  2:974527/1‑138 (MQ=255)
             cTGGCCGAACTGGTCAGCACCCTGAACCGTAGCCTGTTCGAAGGTGTCGACGAGCTGGAAGTGGGCATGCAGTTCCACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCgacgac                                                                                                                                                   <  1:974527/138‑1 (MQ=255)
             cTGGCCGAACTGGTCAGCACCCTGAACCGTAGCCTGTTCGAAGGTGTCGACGAGCTGGAAGTGGGCATGCAGTTCCACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCAGCGAGCCGGACGGTGACGTCGTCGCCGTCGAt                                                                                                                                       <  1:1268899/150‑1 (MQ=255)
                  cGAACTGGTCAGCACCCTGAACCGTAGCCTGTTCGAAGGTGTCGACGAGCTGGAAGTGGGCATGCAGTTCCACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGTGACGTCGTCGCCGTCGATgtcgc                                                                                                                                  <  1:525592/150‑5 (MQ=255)
                  cGAACTGGTCAGCACCCTGAACCGTAGCCTGTTCGAAGGTGTCGACGAGCTGGAAGTGGGCATGCAGTTCCACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATgtcgc                                                                                                                                  <  1:944033/150‑5 (MQ=255)
                   gAACTGGTCAGCACCCTGAACCGTAGCCTGTTCGAAGGTGTCGACGAGCTGGAAGTGGGCATGCAGTTCCACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAac                                                                                                                                 >  1:474354/1‑150 (MQ=255)
                   gAACTGGTCAGCACCCTGAACCGTAGCCTGTTCGAAGGTGTCGACGAGCTGGAAGTGGGCATGCAGTTCCACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAac                                                                                                                                 <  1:736390/150‑1 (MQ=255)
                    aaCTGGTCAGCACCCTGAACCGTAGCCTGTTCGAAGGTGTCGACGAGCTGGAAGTGGGCATGCAGTTCCACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAacc                                                                                                                                >  1:754761/1‑150 (MQ=255)
                         gTCAGCACCCTGAACCGTAGCCTGTTCGAAGGTGTCGACGAGCTGGAAGTGGGCATGCAGTTCCACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAAccaccca                                                                                                                           >  1:978431/1‑150 (MQ=255)
                             gCACCCTGAACCGTAGCCTGTTCGAAGGTGTCGACGAGCTGGAAGTGGGCATGCAGTTCCACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTgg                                                                                                                       >  1:543153/1‑150 (MQ=255)
                                cccTGAACCGTAGCCTGTTCGAAGGTGTCGACGAGCTGGAAGTGGGCATGCAGTTCCACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCg                                                                                                                    <  2:474354/150‑1 (MQ=255)
                                     aaCCGTAGCCTGTTCGAAGGTGTCGACGAGCTGGAAGTGGGCATGCAGTTCCACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAg                                                                                                               >  1:111018/1‑150 (MQ=255)
                                      aCCGTAGCCTGGTCGAAGGTGTCGACGAGCTGGAAGTGGGCATGCAGTTCCACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAgc                                                                                                              <  2:1062309/150‑1 (MQ=255)
                                            gCCTGTTCGAAGGTGTCGACGAGCTGGAAGTGGGCATGCAGTTCCACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGa                                                                                                        >  1:208204/1‑150 (MQ=255)
                                             ccTGTTCGAAGGTGTCGACGAGCTGGAAGTGGGCATGCAGTTCCACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAgcgc                                                                                                            >  2:234973/1‑145 (MQ=255)
                                             ccTGTTCGAAGGTGTCGACGAGCTGGAAGTGGGCATGCAGTTCCACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAgcgc                                                                                                            <  1:234973/145‑1 (MQ=255)
                                              cTGTTCGAAGGTGTCGACGAGCTGGAAGTGGGCATGCAGTTCCACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGAcc                                                                                                      >  2:557210/1‑150 (MQ=255)
                                               tGTTCGAAGGTGTCGACGAGCTGGAAGTGGGCATGCAGTTCCACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCt                                                                                                     >  2:1162258/1‑150 (MQ=255)
                                               tGTTCGAAGGTGTCGACGAGCTGGAAGTGGGCATGCAGTTCCACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCt                                                                                                     >  2:2266037/1‑150 (MQ=255)
                                                 ttCGAAGGTGTCGACGCGCTGGAAGTGGGCATGCAGTTCCACGCTTCGGCGCCCGACGGCCAGATGCACATGTTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTc                                                                                                   <  1:286730/150‑1 (MQ=255)
                                                   cGAAGGTGTCGACGAGCTGGAAGTGGGCATGCAGTTCCACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCa                                                                                                 <  2:1273117/150‑1 (MQ=255)
                                                   cGAAGGTGTCGACGAGCTGGAAGTGGGCATGCAGTTCCACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCa                                                                                                 <  1:2052596/150‑1 (MQ=255)
                                                    gAAGGTGTCGTCGAGCTGGAAGTGGGCATGCAGTTCCACGCTTCGGCGACGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCATCGTTTATGGTAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAg                                                                                                <  1:2363172/150‑1 (MQ=255)
                                                      aGGTGTCGACGAGCTGGAAGTGGGCATGCAGTTCCACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGt                                                                                              >  2:1920655/1‑150 (MQ=255)
                                                          gtCGACGAGCTGGAAGTGGGCATGCAGTTCCACGCTTCGGCGCCGGTCGCCCAGATGCAGATCGCCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTGGAAGGTCagg                                                                                          <  1:2119115/150‑3 (MQ=255)
                                                          gtCGACGAGCTGGAAGTGGGCATGCAGTTCCACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCacg                                                                                          <  2:2212556/150‑3 (MQ=255)
                                                           tCGACGAGCTGGAAGTGGGCATGCAGTTCCACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGACAGCGTTGTGTGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAgg                                                                                         >  2:65488/1‑150 (MQ=255)
                                                             gacgaGCTGGAAGTGGGCATGCAGTTCCACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAGGtt                                                                                       >  2:1827854/1‑150 (MQ=255)
                                                                     ggAAGTGGGCATGCAGTTCCACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAGGTTGTGAAcgt                                                                               <  2:543153/150‑1 (MQ=255)
                                                                      gAAGTGGGCATGCAGTTCCACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAGGTTGTGAAcgtg                                                                              >  1:1571510/1‑150 (MQ=255)
                                                                          tGGGCACGCAGTTCCACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGcc                                                                                                                     >  2:357456/1‑107 (MQ=255)
                                                                          tGGGCACGCAGTTCCACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGcc                                                                                                                     <  1:357456/107‑1 (MQ=255)
                                                                           gggCATGCAGTTCCACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAGGTTGTGAACGTGCGTGa                                                                         >  2:954508/1‑150 (MQ=255)
                                                                            ggCATGCAGTTCCACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAacca                                                                                                                               >  1:2396930/1‑95 (MQ=255)
                                                                            ggCATGCAGTTCCACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTCATGGCAacca                                                                                                                               <  2:2396930/95‑1 (MQ=255)
                                                                              cATGCAGTTCCACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAGGTTGTGAACGTGCGTGACGc                                                                      <  1:1920655/150‑1 (MQ=255)
                                                                                tGCAGTTCCACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATgg                                                                                                                                     <  2:2367975/85‑1 (MQ=255)
                                                                                tGCAGTTCCACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATgg                                                                                                                                     >  1:2367975/1‑85 (MQ=255)
                                                                                tGCAGTTCCACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAGGTTGTGAACGTGCGTGACGCCa                                                                    <  2:1571510/150‑1 (MQ=255)
                                                                                 gCAGTTCCACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAgc                                                                                                              <  1:832415/107‑1 (MQ=255)
                                                                                 gCAGTTCCACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAgc                                                                                                              >  2:832415/1‑107 (MQ=255)
                                                                                 gCAGTTCCACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAGGTTGTGAACGTGCGTGAc                                                                        <  1:2392214/145‑1 (MQ=255)
                                                                                 gCAGTTCCACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGAGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAGGTTGTGAACGTGCGTGAc                                                                        >  2:2392214/1‑145 (MQ=255)
                                                                                  taGTTCCACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAGGTTGTGAACGTGCGTGACGCCAGc                                                                  <  1:1717447/149‑1 (MQ=255)
                                                                                  cAGTTCCACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAGGTTGTGAACGTGCGTGACGCCAGc                                                                  <  2:2334738/150‑1 (MQ=255)
                                                                                        cACGCTTCGGCGCCGGACGGTCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAGGTTGTGAACGTGCGTGACGCCAGCGACgaa                                                            <  1:341130/150‑1 (MQ=255)
                                                                                        cACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAGGTTGTGAACGTGCGTGACGCCAGCGACgaa                                                            <  1:954508/150‑1 (MQ=255)
                                                                                         aCGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCa                                                                                                 >  1:2252004/1‑112 (MQ=255)
                                                                                         aCGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCa                                                                                                 <  2:2252004/112‑1 (MQ=255)
                                                                                             ttCGGCGCCGGACGGCGGGCTGCCAGTGGTGACCGCCCGCAACAGCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAGGTTGTGAACGTGCGTGACGCCAGCGACGAAGAAAt                                                       <  2:264454/150‑1 (MQ=255)
                                                                                             ttCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAGGTTGTGAACGTGCGTGACGCCAGCGACGAAGAAAt                                                       >  1:264454/1‑150 (MQ=255)
                                                                                                   gcCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAaccacc                                                                                                                             <  1:2257674/74‑1 (MQ=255)
                                                                                                   gcCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAaccacc                                                                                                                             >  2:2257674/1‑74 (MQ=255)
                                                                                                     cGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAGGTTGTGAACGTGCGTGACGCCAGCGACGAAGAAATCGCTCAcc                                               <  2:208204/150‑1 (MQ=255)
                                                                                                            ccAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCGACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAGGTTGTGAACGTGCGTGACGCCAGCGACGAAGAAATCGCTCACCGTCACAt                                        >  1:2190708/1‑150 (MQ=255)
                                                                                                            ccAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCAACGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAGGTTGTGAACGTGCGTGACGCCAGCGACGAAGAAATCGCTTACCGTCACAt                                        >  1:372501/1‑150 (MQ=255)
                                                                                                             cAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAGGTTGTGAACGTGCGTGACGCCAGCGACGAAGAAATCGCTCACCGTCACATc                                       <  2:754761/150‑1 (MQ=255)
                                                                                                              aGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAGGTTGTGAACGTGCGTGACGCCAGCGACGAAGAAATCGCTCACCGTca                                           <  2:1082347/145‑1 (MQ=255)
                                                                                                              aGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAGGTTGTGAACGTGCGTGACGCCAGCGACGAAGAAATCGCTCACCGTca                                           >  1:1082347/1‑145 (MQ=255)
                                                                                                                aTGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAGGTTGTGAACGTGCGTGACGCCAGCCACTAAGAAATCGCTCACCGTCACATCCAc                                    <  1:65488/150‑1 (MQ=255)
                                                                                                                 tGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAGGTTGTGCACATGCGTGACGCCAGCGACGAAGAAATCGCTCACCGTCACATCCACg                                   <  1:1162258/150‑1 (MQ=255)
                                                                                                                  gCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAGGTTGTGAACGTGCGTGACGCCAGCGACGAAGAAATCGCTCACCGTCACATCCACgg                                  <  1:2237687/150‑1 (MQ=255)
                                                                                                                     gATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCACGGTtgt                                                                                     <  2:1844495/96‑1 (MQ=255)
                                                                                                                     gATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAGGTtgt                                                                                     >  1:1844495/1‑96 (MQ=255)
                                                                                                                     gATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAGGTTGTGAACGTGCGTGACGCCAGCGACGAAGAAATCGCTCACCGTCACATCCACgg                                  >  1:1094902/1‑147 (MQ=255)
                                                                                                                     gATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAGGTTGTGAACGTGCGTGACGCCAGCGACGAAGAAATCGCTCACCGTCACATCCACgg                                  <  2:1094902/147‑1 (MQ=255)
                                                                                                                     gATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAGGTTGTGAACGTGCGTGACGCCAGCGACGAAGAAATCGCTCACCGTCACATCCACGGTGa                               >  2:41371/1‑150 (MQ=255)
                                                                                                                      aTCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAGGTTGTGAACGTGCGTGACGCCAGCGACGAAGAAATCGCTCACCGTCACATCCACGGTGaa                              >  2:2357213/1‑150 (MQ=255)
                                                                                                                            aCCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAGGTTGTGAACGTGCGTGACGCCAGCGACGAAGAAATCGCTCACCGTCACATCCACGGTGAAGGTGGc                        >  1:1568017/1‑150 (MQ=255)
                                                                                                                             ccATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAGGTTGTGAACGTGCGTGACGCCAGCGACGAAGAAATCGCTCACCGTCACATCCACGGTGAAGGTGGcc                       <  1:1827854/150‑1 (MQ=255)
                                                                                                                              cATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAGGTTGTGAACGTGCGTGACGCCAGCGACGAAGAAATCGCTCACCGTCACATCCACGGTGAAGGTGGCCa                      >  1:2384027/1‑150 (MQ=255)
                                                                                                                                tCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAGGTTGTGAACGTGCGTGACGCCAGCGACGAAGAAATCGCTCACCGTCACATCCACGGTGAAGGTGGCCATc                    >  1:2284835/1‑150 (MQ=255)
                                                                                                                                   gcgACATCGACGGCGACGACGTCACCGTTGATGGCAACCACACACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAGGTTGTGAACGTGCGTGACGCCAGCGACGAAGAAATCGCTCACCGTCACATCCACGGTGAAGGTGGCCATcacc                 >  1:2359232/1‑150 (MQ=255)
                                                                                                                                       cATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAGGTTGTGAACGTGCGTGACGCCAGCGACGAAGAAATCGCTCACCGTCACATCCACGGTGAAGGTGGCCATCACCACTg             >  2:336142/1‑150 (MQ=255)
                                                                                                                                       cATCAACGGTGACGTCGTCGCCGTCGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAGGTTGTGAACGTGCGTGACGCCAGCGACGAAGAAATCGCTCACCGTCACATCCACGGTGAAGGTGGCCATCACCACTg             >  2:122243/1‑150 (MQ=255)
                                                                                                                                          cGACGGCGACGACGTCACCGTTGATGGCAACCACCTACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAGGTTGTGAACGTGCGTGACGCCAGCGACGAAGAAATCGCTCACCGTCACATCCACGGTGAAGGTGGCCATCACCACTGAtt          <  2:2370970/150‑1 (MQ=255)
                                                                                                                                           aaCGGTGACGTCGTCGCCGTCGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAGGTTGTGAACGTGCGTGACGCCAGCGACGAAGAAATCGCTCACCGTCACATCCACg                                   <  2:1694125/123‑1 (MQ=255)
                                                                                                                                           aaCGGTGACGTCGTCGCCGTCGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAGGTTGTGAACGTGCGTGACGCCAGCGACGAAGAAATCGCTCACCGTCACATCCACg                                   >  1:1694125/2‑124 (MQ=255)
                                                                                                                                            aCGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAGGTTGTGAACGTGCGTGACGCCAGCGACGAAGAAATCGCTCACCGTCACATCCACGGTGAAGGTGGCCATCACCACTGAtttt        >  1:458605/1‑150 (MQ=255)
                                                                                                                                              ggCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAGGTTGTGAACGTGCGTGACGCCAGCGACGAAGAAATCGCTCACCGTCACATCCACGGTGAAGGTGGCCATCACCACTGATTTTCt      <  1:514497/150‑1 (MQ=255)
                                                                                                                                               gCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAGGTTGTGAACGTGCGTGACGCCAGCGACGAAGAAATCGCTCACCGTCACATCCACGGTGAAGGTGGCCATCACCACTGATTTTCTg     <  2:2384027/150‑1 (MQ=255)
                                                                                                                                                cgacgaCGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAGGTTGTGAACGTGCGTGACGCCAGCGACGAAGAAATCGCTCACCGTCACATCCACGGTGAAGGTGGCCATCACCACTGATTTTCTgc    <  2:2284835/150‑1 (MQ=255)
                                                                                                                                                  acgacgTCACCGTTGATGGCGACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAGGTTGTGAACGTGCGTGACGCCAGCGACGAAGAAATCGCTCACCGTCACATCCACGGTGAAGGTGGCCATCACCACTGATTTTCTgcgc  <  2:2190708/150‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                  
CTACGGCGAGTACCTGGCCGAACTGGTCAGCACCCTGAACCGTAGCCTGTTCGAAGGTGTCGACGAGCTGGAAGTGGGCATGCAGTTCCACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAGGTTGTGAACGTGCGTGACGCCAGCGACGAAGAAATCGCTCACCGTCACATCCACGGTGAAGGTGGCCATCACCACTGATTTTCTGCGC  >  NC_002947/894250‑894545

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: