Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 894,404 A→G 5.9% T119A (ACC→GCC)  slyD → FKBP‑type peptidyl‑prolyl cis‑trans isomerase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_002947894,4040AG 5.9% 256.3 / 4.4 84T119A (ACC→GCC) slyDFKBP‑type peptidyl‑prolyl cis‑trans isomerase
Reads supporting (aligned to +/- strand):  ref base A (39/40);  new base G (2/3);  total (41/43)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.44e-01

GAGTACCTGGCCGAACTGGTCAGCACCCTGAACCGTAGCCTGTTCGAAGGTGTCGACGAGCTGGAAGTGGGCATGCAGTTCCACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAGGTTGTGAACGTGCGTGACGCCAGCGACGAAGAAATCGCTCACCGTCACATCCACGGTGAAGGTGGCCATCACCACTGATTTTCTGCGCTAAGCTCA  >  NC_002947/894257‑894553
                                                                                                                                                   |                                                                                                                                                     
gAGTACCTGGCCGAACTGGTCAGCACCCTGAACCGTAGCCTGTTCGAAGGTGTCGACGAGCTGGAAGTGGGCATGCAGTTCCACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCAcc                                                                                                                                                     >  1:1334992/1‑150 (MQ=255)
  gTACCTGGCCGAACTGGTCAGCACCCTGAACCGAGTCCTGTTCGAAGGTGTCGACGAGCTGGAAGTGGGCATGCAGTTCCACGATTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGt                                                                                                                                                   >  1:2370970/1‑150 (MQ=255)
      cTGGCCGAACTGGTCAGCACCCTGAACCGTAGCCTGTTCGAAGGTGTCGACGAGCTGGAAGTGGGCATGCAGTTCCACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCAGCGAGCCGGACGGTGACGTCGTCGCCGTCGAt                                                                                                                                               <  1:1268899/150‑1 (MQ=255)
           cGAACTGGTCAGCACCCTGAACCGTAGCCTGTTCGAAGGTGTCGACGAGCTGGAAGTGGGCATGCAGTTCCACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGTGACGTCGTCGCCGTCGATgtcgc                                                                                                                                          <  1:525592/150‑5 (MQ=255)
           cGAACTGGTCAGCACCCTGAACCGTAGCCTGTTCGAAGGTGTCGACGAGCTGGAAGTGGGCATGCAGTTCCACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATgtcgc                                                                                                                                          <  1:944033/150‑5 (MQ=255)
            gAACTGGTCAGCACCCTGAACCGTAGCCTGTTCGAAGGTGTCGACGAGCTGGAAGTGGGCATGCAGTTCCACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAac                                                                                                                                         >  1:474354/1‑150 (MQ=255)
            gAACTGGTCAGCACCCTGAACCGTAGCCTGTTCGAAGGTGTCGACGAGCTGGAAGTGGGCATGCAGTTCCACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAac                                                                                                                                         <  1:736390/150‑1 (MQ=255)
             aaCTGGTCAGCACCCTGAACCGTAGCCTGTTCGAAGGTGTCGACGAGCTGGAAGTGGGCATGCAGTTCCACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAacc                                                                                                                                        >  1:754761/1‑150 (MQ=255)
                  gTCAGCACCCTGAACCGTAGCCTGTTCGAAGGTGTCGACGAGCTGGAAGTGGGCATGCAGTTCCACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAAccaccca                                                                                                                                   >  1:978431/1‑150 (MQ=255)
                      gCACCCTGAACCGTAGCCTGTTCGAAGGTGTCGACGAGCTGGAAGTGGGCATGCAGTTCCACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTgg                                                                                                                               >  1:543153/1‑150 (MQ=255)
                         cccTGAACCGTAGCCTGTTCGAAGGTGTCGACGAGCTGGAAGTGGGCATGCAGTTCCACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCg                                                                                                                            <  2:474354/150‑1 (MQ=255)
                              aaCCGTAGCCTGTTCGAAGGTGTCGACGAGCTGGAAGTGGGCATGCAGTTCCACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAg                                                                                                                       >  1:111018/1‑150 (MQ=255)
                               aCCGTAGCCTGGTCGAAGGTGTCGACGAGCTGGAAGTGGGCATGCAGTTCCACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAgc                                                                                                                      <  2:1062309/150‑1 (MQ=255)
                                     gCCTGTTCGAAGGTGTCGACGAGCTGGAAGTGGGCATGCAGTTCCACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGa                                                                                                                >  1:208204/1‑150 (MQ=255)
                                      ccTGTTCGAAGGTGTCGACGAGCTGGAAGTGGGCATGCAGTTCCACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAgcgc                                                                                                                    >  2:234973/1‑145 (MQ=255)
                                      ccTGTTCGAAGGTGTCGACGAGCTGGAAGTGGGCATGCAGTTCCACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAgcgc                                                                                                                    <  1:234973/145‑1 (MQ=255)
                                       cTGTTCGAAGGTGTCGACGAGCTGGAAGTGGGCATGCAGTTCCACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGAcc                                                                                                              >  2:557210/1‑150 (MQ=255)
                                        tGTTCGAAGGTGTCGACGAGCTGGAAGTGGGCATGCAGTTCCACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCt                                                                                                             >  2:2266037/1‑150 (MQ=255)
                                        tGTTCGAAGGTGTCGACGAGCTGGAAGTGGGCATGCAGTTCCACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCt                                                                                                             >  2:1162258/1‑150 (MQ=255)
                                          ttCGAAGGTGTCGACGCGCTGGAAGTGGGCATGCAGTTCCACGCTTCGGCGCCCGACGGCCAGATGCACATGTTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTc                                                                                                           <  1:286730/150‑1 (MQ=255)
                                            cGAAGGTGTCGACGAGCTGGAAGTGGGCATGCAGTTCCACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCa                                                                                                         <  2:1273117/150‑1 (MQ=255)
                                            cGAAGGTGTCGACGAGCTGGAAGTGGGCATGCAGTTCCACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCa                                                                                                         <  1:2052596/150‑1 (MQ=255)
                                             gAAGGTGTCGTCGAGCTGGAAGTGGGCATGCAGTTCCACGCTTCGGCGACGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCATCGTTTATGGTAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAg                                                                                                        <  1:2363172/150‑1 (MQ=255)
                                               aGGTGTCGACGAGCTGGAAGTGGGCATGCAGTTCCACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGt                                                                                                      >  2:1920655/1‑150 (MQ=255)
                                                   gtCGACGAGCTGGAAGTGGGCATGCAGTTCCACGCTTCGGCGCCGGTCGCCCAGATGCAGATCGCCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTGGAAGGTCagg                                                                                                  <  1:2119115/150‑3 (MQ=255)
                                                   gtCGACGAGCTGGAAGTGGGCATGCAGTTCCACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCacg                                                                                                  <  2:2212556/150‑3 (MQ=255)
                                                    tCGACGAGCTGGAAGTGGGCATGCAGTTCCACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGACAGCGTTGTGTGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAgg                                                                                                 >  2:65488/1‑150 (MQ=255)
                                                      gacgaGCTGGAAGTGGGCATGCAGTTCCACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAGGtt                                                                                               >  2:1827854/1‑150 (MQ=255)
                                                              ggAAGTGGGCATGCAGTTCCACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAGGTTGTGAAcgt                                                                                       <  2:543153/150‑1 (MQ=255)
                                                               gAAGTGGGCATGCAGTTCCACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAGGTTGTGAAcgtg                                                                                      >  1:1571510/1‑150 (MQ=255)
                                                                   tGGGCACGCAGTTCCACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGcc                                                                                                                             >  2:357456/1‑107 (MQ=255)
                                                                   tGGGCACGCAGTTCCACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGcc                                                                                                                             <  1:357456/107‑1 (MQ=255)
                                                                    gggCATGCAGTTCCACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAGGTTGTGAACGTGCGTGa                                                                                 >  2:954508/1‑150 (MQ=255)
                                                                     ggCATGCAGTTCCACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAacca                                                                                                                                       >  1:2396930/1‑95 (MQ=255)
                                                                     ggCATGCAGTTCCACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTCATGGCAacca                                                                                                                                       <  2:2396930/95‑1 (MQ=255)
                                                                       cATGCAGTTCCACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAGGTTGTGAACGTGCGTGACGc                                                                              <  1:1920655/150‑1 (MQ=255)
                                                                         tGCAGTTCCACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATgg                                                                                                                                             <  2:2367975/85‑1 (MQ=255)
                                                                         tGCAGTTCCACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATgg                                                                                                                                             >  1:2367975/1‑85 (MQ=255)
                                                                         tGCAGTTCCACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAGGTTGTGAACGTGCGTGACGCCa                                                                            <  2:1571510/150‑1 (MQ=255)
                                                                          gCAGTTCCACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAgc                                                                                                                      >  2:832415/1‑107 (MQ=255)
                                                                          gCAGTTCCACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAgc                                                                                                                      <  1:832415/107‑1 (MQ=255)
                                                                          gCAGTTCCACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAGGTTGTGAACGTGCGTGAc                                                                                <  1:2392214/145‑1 (MQ=255)
                                                                          gCAGTTCCACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGAGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAGGTTGTGAACGTGCGTGAc                                                                                >  2:2392214/1‑145 (MQ=255)
                                                                           taGTTCCACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAGGTTGTGAACGTGCGTGACGCCAGc                                                                          <  1:1717447/149‑1 (MQ=255)
                                                                           cAGTTCCACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAGGTTGTGAACGTGCGTGACGCCAGc                                                                          <  2:2334738/150‑1 (MQ=255)
                                                                                 cACGCTTCGGCGCCGGACGGTCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAGGTTGTGAACGTGCGTGACGCCAGCGACgaa                                                                    <  1:341130/150‑1 (MQ=255)
                                                                                 cACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAGGTTGTGAACGTGCGTGACGCCAGCGACgaa                                                                    <  1:954508/150‑1 (MQ=255)
                                                                                  aCGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCa                                                                                                         <  2:2252004/112‑1 (MQ=255)
                                                                                  aCGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCa                                                                                                         >  1:2252004/1‑112 (MQ=255)
                                                                                      ttCGGCGCCGGACGGCGGGCTGCCAGTGGTGACCGCCCGCAACAGCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAGGTTGTGAACGTGCGTGACGCCAGCGACGAAGAAAt                                                               <  2:264454/150‑1 (MQ=255)
                                                                                      ttCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAGGTTGTGAACGTGCGTGACGCCAGCGACGAAGAAAt                                                               >  1:264454/1‑150 (MQ=255)
                                                                                            gcCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAaccacc                                                                                                                                     >  2:2257674/1‑74 (MQ=255)
                                                                                            gcCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAaccacc                                                                                                                                     <  1:2257674/74‑1 (MQ=255)
                                                                                              cGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAGGTTGTGAACGTGCGTGACGCCAGCGACGAAGAAATCGCTCAcc                                                       <  2:208204/150‑1 (MQ=255)
                                                                                                     ccAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCGACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAGGTTGTGAACGTGCGTGACGCCAGCGACGAAGAAATCGCTCACCGTCACAt                                                >  1:2190708/1‑150 (MQ=255)
                                                                                                     ccAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCAACGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAGGTTGTGAACGTGCGTGACGCCAGCGACGAAGAAATCGCTTACCGTCACAt                                                >  1:372501/1‑150 (MQ=255)
                                                                                                      cAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAGGTTGTGAACGTGCGTGACGCCAGCGACGAAGAAATCGCTCACCGTCACATc                                               <  2:754761/150‑1 (MQ=255)
                                                                                                       aGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAGGTTGTGAACGTGCGTGACGCCAGCGACGAAGAAATCGCTCACCGTca                                                   >  1:1082347/1‑145 (MQ=255)
                                                                                                       aGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAGGTTGTGAACGTGCGTGACGCCAGCGACGAAGAAATCGCTCACCGTca                                                   <  2:1082347/145‑1 (MQ=255)
                                                                                                         aTGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAGGTTGTGAACGTGCGTGACGCCAGCCACTAAGAAATCGCTCACCGTCACATCCAc                                            <  1:65488/150‑1 (MQ=255)
                                                                                                          tGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAGGTTGTGCACATGCGTGACGCCAGCGACGAAGAAATCGCTCACCGTCACATCCACg                                           <  1:1162258/150‑1 (MQ=255)
                                                                                                           gCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAGGTTGTGAACGTGCGTGACGCCAGCGACGAAGAAATCGCTCACCGTCACATCCACgg                                          <  1:2237687/150‑1 (MQ=255)
                                                                                                              gATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCACGGTtgt                                                                                             <  2:1844495/96‑1 (MQ=255)
                                                                                                              gATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAGGTtgt                                                                                             >  1:1844495/1‑96 (MQ=255)
                                                                                                              gATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAGGTTGTGAACGTGCGTGACGCCAGCGACGAAGAAATCGCTCACCGTCACATCCACgg                                          >  1:1094902/1‑147 (MQ=255)
                                                                                                              gATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAGGTTGTGAACGTGCGTGACGCCAGCGACGAAGAAATCGCTCACCGTCACATCCACgg                                          <  2:1094902/147‑1 (MQ=255)
                                                                                                              gATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAGGTTGTGAACGTGCGTGACGCCAGCGACGAAGAAATCGCTCACCGTCACATCCACGGTGa                                       >  2:41371/1‑150 (MQ=255)
                                                                                                               aTCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAGGTTGTGAACGTGCGTGACGCCAGCGACGAAGAAATCGCTCACCGTCACATCCACGGTGaa                                      >  2:2357213/1‑150 (MQ=255)
                                                                                                                     aCCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAGGTTGTGAACGTGCGTGACGCCAGCGACGAAGAAATCGCTCACCGTCACATCCACGGTGAAGGTGGc                                >  1:1568017/1‑150 (MQ=255)
                                                                                                                      ccATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAGGTTGTGAACGTGCGTGACGCCAGCGACGAAGAAATCGCTCACCGTCACATCCACGGTGAAGGTGGcc                               <  1:1827854/150‑1 (MQ=255)
                                                                                                                       cATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAGGTTGTGAACGTGCGTGACGCCAGCGACGAAGAAATCGCTCACCGTCACATCCACGGTGAAGGTGGCCa                              >  1:2384027/1‑150 (MQ=255)
                                                                                                                         tCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAGGTTGTGAACGTGCGTGACGCCAGCGACGAAGAAATCGCTCACCGTCACATCCACGGTGAAGGTGGCCATc                            >  1:2284835/1‑150 (MQ=255)
                                                                                                                            gcgACATCGACGGCGACGACGTCACCGTTGATGGCAACCACACACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAGGTTGTGAACGTGCGTGACGCCAGCGACGAAGAAATCGCTCACCGTCACATCCACGGTGAAGGTGGCCATcacc                         >  1:2359232/1‑150 (MQ=255)
                                                                                                                                cATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAGGTTGTGAACGTGCGTGACGCCAGCGACGAAGAAATCGCTCACCGTCACATCCACGGTGAAGGTGGCCATCACCACTg                     >  2:336142/1‑150 (MQ=255)
                                                                                                                                cATCAACGGTGACGTCGTCGCCGTCGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAGGTTGTGAACGTGCGTGACGCCAGCGACGAAGAAATCGCTCACCGTCACATCCACGGTGAAGGTGGCCATCACCACTg                     >  2:122243/1‑150 (MQ=255)
                                                                                                                                   cGACGGCGACGACGTCACCGTTGATGGCAACCACCTACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAGGTTGTGAACGTGCGTGACGCCAGCGACGAAGAAATCGCTCACCGTCACATCCACGGTGAAGGTGGCCATCACCACTGAtt                  <  2:2370970/150‑1 (MQ=255)
                                                                                                                                    aaCGGTGACGTCGTCGCCGTCGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAGGTTGTGAACGTGCGTGACGCCAGCGACGAAGAAATCGCTCACCGTCACATCCACg                                           >  1:1694125/2‑124 (MQ=255)
                                                                                                                                    aaCGGTGACGTCGTCGCCGTCGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAGGTTGTGAACGTGCGTGACGCCAGCGACGAAGAAATCGCTCACCGTCACATCCACg                                           <  2:1694125/123‑1 (MQ=255)
                                                                                                                                     aCGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAGGTTGTGAACGTGCGTGACGCCAGCGACGAAGAAATCGCTCACCGTCACATCCACGGTGAAGGTGGCCATCACCACTGAtttt                >  1:458605/1‑150 (MQ=255)
                                                                                                                                       ggCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAGGTTGTGAACGTGCGTGACGCCAGCGACGAAGAAATCGCTCACCGTCACATCCACGGTGAAGGTGGCCATCACCACTGATTTTCt              <  1:514497/150‑1 (MQ=255)
                                                                                                                                        gCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAGGTTGTGAACGTGCGTGACGCCAGCGACGAAGAAATCGCTCACCGTCACATCCACGGTGAAGGTGGCCATCACCACTGATTTTCTg             <  2:2384027/150‑1 (MQ=255)
                                                                                                                                         cgacgaCGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAGGTTGTGAACGTGCGTGACGCCAGCGACGAAGAAATCGCTCACCGTCACATCCACGGTGAAGGTGGCCATCACCACTGATTTTCTgc            <  2:2284835/150‑1 (MQ=255)
                                                                                                                                           acgacgTCACCGTTGATGGCGACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAGGTTGTGAACGTGCGTGACGCCAGCGACGAAGAAATCGCTCACCGTCACATCCACGGTGAAGGTGGCCATCACCACTGATTTTCTgcgc          <  2:2190708/150‑1 (MQ=255)
                                                                                                                                                gTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAGGTTGTGAACGTGCGTGACGCCAGCGACGAAGAAATCGCTCACCGTCACATCCACGGTGAAGGTGGCCATCACCACTGATTTTCTGCGCTAAGc     >  1:806607/1‑150 (MQ=255)
                                                                                                                                                   aCCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAGGTTGTGAACGTGCGTGACGCGAGCGACGAAGAAATCGCTCACCGTCACATCCACGGTAAAGGTGACCATCACCACTGATTTTCTGCGCTAAGCTCa  >  1:2340011/1‑150 (MQ=255)
                                                                                                                                                   aCCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAGGTTGTGAACGTGCGTGACGCCAGCGACGAAGAAATCGCTCACCGTCACATCCACGGTGAAGGTGGCCATCACCACTGATTTTCTGCGCTAAGCTCa  <  2:111018/150‑1 (MQ=255)
                                                                                                                                                   aCCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAGGTTGTGAACGTGCGTGACGCCAGCGACGAAGAAATCGCTCACCGTCACATCCACGGTGAAGGTGGCCATCACCACTGATTTTCTGCGCTAAGCTCa  <  1:336142/150‑1 (MQ=255)
                                                                                                                                                   |                                                                                                                                                     
GAGTACCTGGCCGAACTGGTCAGCACCCTGAACCGTAGCCTGTTCGAAGGTGTCGACGAGCTGGAAGTGGGCATGCAGTTCCACGCTTCGGCGCCGGACGGCCAGATGCAGATCGTCACCATCCGCGACATCGACGGCGACGACGTCACCGTTGATGGCAACCACCCACTGGCCGGTCAGCGCCTGACCTTCCAGGTCAAGGTTGTGAACGTGCGTGACGCCAGCGACGAAGAAATCGCTCACCGTCACATCCACGGTGAAGGTGGCCATCACCACTGATTTTCTGCGCTAAGCTCA  >  NC_002947/894257‑894553

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: