| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 919,179 | C→A | 5.2% | intergenic (‑77/+129) | opdC ← / ← PP_5458 | histidine‑specific outer membrane porin D/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 919,179 | 0 | C | A | 5.2% | 246.1 / 2.8 | 77 | intergenic (‑77/+129) | opdC/PP_5458 | histidine‑specific outer membrane porin D/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base C (36/37); new base A (2/2); total (38/39) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.98e-01 | |||||||||||
GCCTGGGCGGCGAAAGGGATCGTTGCAGTCAACGCAATGAAAAGCGGGGTAAAACGAAACGCGGAAGGCACCGGTACTAGCTCCTTGGATCTGACGGTGGGGCAGTTTTTATATTTGAATGTGCGTCTTTTTTATAGGGACACGTTACAGCCGGGCTGAGCGTTAAAGCACATAAAAAAAGCCGCTGATCGGCAGCGGCTTTAAAAGGCTAACATATCGGCACCGGGGGTGCCCATGGCGTAGCCAAGGGAAAACGGGAGTAGCGACAGCGCGTGATCAGCTGTCGGCACTG > NC_002947/919032‑919323 | gCCTGGGCGGCGAAAGGGATCGTTGCAGTCAACGCAATGAAAAGCGGGGTAAAACGAAACGCGGCCGGATAGTGTACTATCTCCTTGGATCTGACGGTGGGGCAGTTTTTATATTTGAATGTGCGTCTTTTTTATAGGGACACGTTACAg < 1:1354293/150‑1 (MQ=255) cTGGGCGGCGAAAGGGATCGTTGCAGTCAAGGCAATGAAAGGCGGGGTAAAACGAAACGCGGAAGGCACCGGGGCTAGATACTATGGCCTCGGTTTGGGACAGTTTTTATATTTGAATGTGCGTCTTTTTTATAGGGACACGGTACAGcg > 1:172203/1‑149 (MQ=255) tGGGCGGCGAAAGGGATCGTTGCAGTCAACGCAATGAAAAGCGGGGTAAAACGAAACGCGGAAGGCACCGGTACTAGCTCCTTGGATCTGACGGTGGGGCAGTTTTTATATTTGAATGTGCGTCTTTTTTATAGGGACACGTTACAGCCg < 2:53796/150‑1 (MQ=255) gggCGGCGAAAGGGATCGTTGCAGTCAACGCAATGAAAAGCGGGGTAAAACGAAACGCGGAAGGCACCGGTACTAGCTCCTTGGATCTGACGGTGGGGCAGTTTTTATATTTGAATGTGCGTCTTTTTTATAGGGACACGTTACAGCCgg < 1:1449303/150‑1 (MQ=255) gAAAGGGATCGTTGCAGTCAACGCAATGAAAAGCGGGGTAAAACGAAACGCGGAAGGCACCGGTACTAGCTCCTTGGATCTGACGGTGGGGCAGTTTTTATATTTGAATGTGCGTCTTTTTTATAGGGACACGTTACAGCCGGGCTGAGc > 2:1192913/1‑150 (MQ=255) gAAAGGGATCGTTGCAGTCAACGCAATGAAAAGCGGGGTAAAACGAAACGCGGAAGGCACCGGTACTAGCTCCTTGGATCTGACGGTGGGGCAGTTTTTATATTTGAATGTGCGTCTTTTTTATAGGGACACGTTACAGCCGGGCTGAGc > 1:1387146/1‑150 (MQ=255) aGGGATCGTTGCAGTCAACGCAATGAAAAGCGGGGTAAAACGAAACGCGGAAGGCACCGGTACTAGCTCCTTGGATCTGACGGTGGGGCAGTTTTTATATTTGAATGTGCGTCTTTTTTATAGGGACACGTTACAGCCGGGCTGAGCGtt > 2:1862860/1‑150 (MQ=255) aGGGATCGTTGCAGTCAACGCAATGAAAAGCGGGGTAAAACGAAACGCGGAAGGCACCGGTACTAGCTCCTTGGATCTGACGGTGGGGCAGTTTTTATATTTGAATGTGCGTCTTTTTTATAGGGACACGTTACAGCCGGGCTGAGCGtt > 2:1862823/1‑150 (MQ=255) gATCGTTGCAGTCAACGCAATGAAAAGCGGGGTAAAACGAAACGCGGAAGGCACCGGTACTAGCTCCTTGGATCTGACGGTGGGGCAGTTTTTATATTTGAATGTGCGTCTTTTTTATATGGACACGTTACAGCCGGGCTGAGCGTTaaa < 2:683181/150‑1 (MQ=255) gATCGTTGCAGTCAACGCAATGAAAAGCGGGGTAAAACGAAACGCGGAAGGCACCGGTACTAGCTCCTTGGATCTGACGGTGGGGCAGTTTTTATATTTGAATGTGCGTCTTTTTTATAGGGACACGTTACAGCCGGGCTGAGCGTTaaa < 2:1387146/150‑1 (MQ=255) gATCGTTGCAGTCAACGCAATGAAAAGCGGGGTAAAACGAAACGCGGAAGGCACCGGTACTAGCTCCTTGGATCTGACGGTGGGGCAGTTTTTATATTTGAATGTGCGTCTTTTTTATAGGGACACGTTACAGCCGGGCTGAGCGTTaaa > 1:924133/1‑150 (MQ=255) gTTGCAGTCAACGCAATGAAAAGCGGGGTAAAACGAAACGCGGAAGGCACCGGTACTAGCTCCTTGGATCTGACGGTGGGGCAGTTTTTATATTTGAATGTGCGTCTTTTTTATAGGGACACGTTACAGCCGGGCTGAGCGTTAAAGcac > 2:707781/1‑150 (MQ=255) gTTGCAGTCAACGCAATGAAAAGCGGGGTAAAACGAAACGCGGAAGGCACCGGTACTAGCTCCTTGGATCTGACGGCGGGAGAGTTTTTGTATTTGAATGTGCGTCTTTTTTATAGGGACACGTTACAGCCAGGCTGGGCGGTAAAGcac > 1:43097/1‑150 (MQ=255) ttGCAGTCAACGCAATGAAAAGCGGGGTAAAACGAAACGCGGAAGGCACCGGTACTAGCTCCTTGGATCTGACGGTGGGGCAGTTTTTATATTTGAATGTGCGTCTTTTTTATAGGGACACGTTACAGCCGGGCTGAGCGTTAAAGcaca > 2:1670949/1‑150 (MQ=255) gCAGTCAACGCAATGAAAAGCGGGGTAAAACGAAACGCGGAAGGCACCGGTACTAGCTCCTTGGATCTGACGGTGGGGCAGTTTTTATATTTGAATGTGCGTCTTTTTTATAGGGACACGTTACAGCCGGGCTGAGCGTTAAAGCACATa > 1:609036/1‑150 (MQ=255) gTCAACGCAATGAAAAGCGGGGTAAAACGAAACGCGGAAGGCACCGGTACTAGCTCCTTGGATCTGACGGTGGGGCAGTTTTTATATTTGAATGTGCGTCTTTTTTATAGGGACACGTTACAGCCGGGCTGAGCGTTAAAGCACATaaaa > 2:1628577/1‑150 (MQ=255) tCAACGCAATGAAAAGCGGGGTAAAACGAAACGCGGAAGGCACCGGTGGTCGAGACAATGTTCTGACGGTGGGGCAGTTTTTATATTTGAATGTGCGTCTTTTTTATAGGGACACGTTACAGCCGGGCTGAGCGTTAAAGCACATaaaaa > 2:2393476/1‑150 (MQ=255) tCAACGCAATGAAAAGCGGGGTAAAACGAAACGCGGAAGGCACCGGTACTAGCTCCTTGGATCTGACGGTGGGGCAGTTTTTATATTTGAATGTGCGTCTTTTTTATAGGGACACGTTACAGCCGGGCTGAGCGTTaaa > 2:1201867/1‑139 (MQ=255) tCAACGCAATGAAAAGCGGGGTAAAACGAAACGCGGAAGGCACCGGTACTAGCTCCTTGGATCTGACGGTGGGGCAGTTTTTATATTTGAATGTGCGTCTTTTTTATAGGGACACGTTACAGCCGGGCTGAGCGTTaaa < 1:1201867/139‑1 (MQ=255) aCGCAATGAAAAGCGGGGTAAAACGAAACGCGGAAGGCACCGGTACTAGCTCCTTGGATCTGACGGTGGGGCAGTTTTTATATTTGAATGTGCGTCTTTTTTATAGGGACACGTTACAGCCggg < 1:783852/124‑1 (MQ=255) aCGCAATGAAAAGCGGGGTAAAACGAAACGCGGAAGGCACCGGTACTAGCTCCTTGGATCTGACGGTGGGGCAGTTTTTATATTTGAATGTGCGTCTTTTTTATAGGGACACGTTACAGCCggg > 2:783852/1‑124 (MQ=255) aCGCAATGAAAAGCGGGGTAAAACGAAACGCGGAAGGCACCGGTACTAGCTCCTTGGATCTGACGGTGGGGCAGTTTTTATATTTGAATGTGCGTCTTTTTTATAGGGACACGTTACAGCCGGGCTGAGCGTTAAAGCACATAAAAAAAg > 1:1890776/1‑150 (MQ=255) gCAATGAAAAGCGGGGTAAAACGAAACGCGGAAGGCACCGGTACTAGCTCCTTGGATCTGACGGTGGGGCAGTTTTTATATTTGAATGTGCGTCTTTTTTATAGGGACACGTTACAGCCGGGCTGAGCGTTAAAGCACATAAAAAAAGcc > 1:489630/1‑150 (MQ=255) gCAATGAAAAGCGGGGTAAAACGAAACGCGGAAGGCACCGGTACTAGCTCCTTGGATCTGACGGTGGGGCAGTTTTTATATTTGAATGTGCGTCTTTTTTATAGGGACACGTTAAAGCCGGGCTGAGCGTTAAAGCACATAAAAAAAGcc > 2:1155006/1‑150 (MQ=255) aaTGAAAAGCGGGGTAAAACGAAACGCGGAAGGCACCGGTACTAGCTCCTTGGATCTGACGGTGGGGCAGTTTTTATATTTGAATGTGCGTCTTTTTTATAGGGACACGTTACAGCCGGGCTGAGCGTTAAAGCACATAAAAAAAGCCGc > 1:964823/1‑150 (MQ=255) aTGAAAAGCGGGGTAAAACGAAACGCGGAAGGCACCGGTACTAGCTCCTTGGATCTGACGGTGGGGCAGTTTTTATATTTGAATGTGCGTCTTTTTTATAGGGACACGTTACAGCCGGGCTGAGCGTTAAAGCACATAAAAAAAGCCGCt > 2:1445761/1‑150 (MQ=255) caaaaGCGGGGTAACACGAAACGCGGAAGGTACCGGTACTAGCTCCTTGGAGCTGACGGTGGGGCAGTTTTTATATTTGAATGTGCGTCTTTTTTATAGGGACACGTTACAGCCGGGCTGAGCGTTAAAGCACATAAAAAAAGCCGCTGa < 1:669718/149‑1 (MQ=255) aGCGGGGTAAAACGAAACGCGGAAGGCACCGGTACTAGCTCCTTGGATCTGACGGTGGGGCAGTTTTTATATTTGAATGTGCGTCTTTTTTATAGGGACACGTTACAGCCGGGCTGAGCGTTAAAGCACATAAAAAAAGCCGCTGATCgg < 2:537325/150‑1 (MQ=255) ggggTAAAACGAAACGCGGAAGGCACCGGTACTAGCTCCTTGGATCTGACGGTGGGGCAGTTTTTATATTTGAATGTGCGTCTTTTTTATAGGGACACGTTACAGCCGGGCTGa > 2:309740/1‑114 (MQ=255) ggggTAAAACGAAACGCGGAAGGCACCGGTACTAGCTCCTTGGATCTGACGGTGGGGCAGTTTTTATATTTGAATGTGCGTCTTTTTTATAGGGACACGTTACAGCCGGGCTGa < 1:309740/114‑1 (MQ=255) aacgaaacgCGGAAGGCACCGGTACTAGCTCCTTGGATCTGACGGTGGGGCAGTTTTTATATTTGAATGTGCGTCTTTTTTATAGGGACACGTTACAGCCGGGCTGAGCGTTAAAGCACATAAAAAAAGCCGCTGATCGGCAGCGGCttt < 2:1801944/150‑1 (MQ=255) gaaacgCGGAAGGCACCGGTACTAGCTCCTTGGATCTGACGGTGGGGCAGTTTTTATATTTGAATGTGCGTCTTTTTTATAGGGACACGTTACAGCCGGGCTGAGCGTTAAAGCACATAAAAAAAGCCGCTGATCGGCAGCGGCTTTaaa > 1:600537/1‑150 (MQ=255) aaacgCGGAAGGCACCGGTACTAGCTCCTTGGATCTGACGGTGGGGCAGTTTTTATATTTGAATGTGCGTCTTTTTTATAGGGACACGTTACAGCCGGGCTGAGCGTTAAAGCACATAAAAAAAGCCGCTGATCGGCAGCGGCTTTaaaa < 2:1890776/150‑1 (MQ=255) gcgGAAGGCACCGGTACTAGCTCCTTGGATCTGACGGTGGGGCAGTTTTTATATTTGAATGTGCGTCTTTTTTATAGGGACACGTTACAGCCGGGCTGAGCGTTAAAGCACATAAAAAAAGCCGCTGCCGATCAGCGGCttttttt > 1:1796942/1‑142 (MQ=255) ggAAGGCACCGGTACTAGCTCCTTGGATCTGACGGTGGGGCAGTTTTTATATTTGAATGTGCGTCTTTTTTATAGGGACACGTTACAGCCGGGCTGAGCGTTAAAGCACATAAAAAAAGCCGCTGATCGGCAGCGGCTTTAAAAGGCTaa < 1:1670949/150‑1 (MQ=255) ggAAGGCACCGGTACTAGCTCCTTGGATCTGACGGTGGGGCAGTTTTTATATTTGAATGTGCGTCTTTTTTATAGGGACACGTTACAGCCGGGCTGAGCGTTAAAGCACATAAAAAAAGCCGCTGATCGGCAGCGGCTTTAAAAGGCTaa < 2:383090/150‑1 (MQ=255) ggAAGGCACCGGTACTAGCTCCTTGGATCTGACGGTGGGGCAGTTTTTATATTTGAATGTGCGTCTTTTTTATAGGGACACGTTACAGCCGGGCTGAGCGTTAAAGCACATAAAAAAAGCCGCTGATCGGCAGCGGCTTTAAAAGGCTaa < 2:383623/150‑1 (MQ=255) ggAAGGCACCGGTACTAGCTCCTTGGATCTGACGGTGGGGCAGTTTTTATATTTGAATGTGCGTCTTTTTTATAGGGACACGTTACAGCCGGGCTGAGCGTTAAAGCACATAAAAAAAGCCGCTGATCGGCAGCGGCTTTAAAAGGCTaa < 2:43097/150‑1 (MQ=255) aGGCACCGGTACTAGCTCCTTGGATCTGACGGTGGGGCAGTTTTTATATTTGAATGTGCGTCTTTTTTATAGGGACACGTTACAGCCGGGCTGAGCGTTAAAGCACATAAAAAAAGCCGCTGATCGGCAGCGGCTTTAAAAGGCTAACat < 1:1192913/150‑1 (MQ=255) cccGGTATTAGCTCCTTGGAGCTGACGGTGGGGCAGTTTTTATATTTGAATGTGCGTCTTTTTTATAGGGACACGTTACAGCCGGGCTGAGCGTTAAAGCACATAAAAAAAGCCGCTGATCGGCAGCGGCTTTAAAAGGCTAACATATCg < 2:1576957/149‑1 (MQ=255) aCCGGTACTAGCTCCTTGGATCTGACGGTGGGGCAGTTTTTATATTTGAATGTGCGTCTTTTTTATAGGGACACGTTACAGCCGGGCTGAGCGTTAAAGCACATAAAAAAAGCCGCTGATCGGCAGCGGCTTTAAAAGGCTAACATATCg > 1:437545/1‑150 (MQ=255) ggTACTAGCTCCTTGGATCTGACGGTGGGGCAGTTTTTATATTTGAATGTGCGTCTTTTTTATAGGGACACGTTACAGCCGGGCTGAGCGTTAAAGCACATAAAAAAAGCCGCTGATCGGCATTTTCTTTAAAAGGCTAACATATCGGCa < 1:1862823/150‑1 (MQ=255) ggTACTAGCTCCTTGGATCTGACGGTGGGGCAGTTTTTATATTTGAATGTGCGTCTTTTTTATAGGGACACGTTACAGCCGGGCTGAGCGTTAAAGCACATAAAAAAAGCCGCTGATCGGCAGCGGCTTTAAAAGGCTAACATATCGGCa < 1:1862860/150‑1 (MQ=255) aCTAGCTCCTTGGATCTGACGGTGGGGCAGTTTTTATATTTGAATGTGCGTCTTTTTTATAGGGACACGTTACAGCCGGGCTGAGCGTTAAAGCACATAAAAAAAGCCGCTGATCGGCAGCGGCTTTAAAAGGCTAACATATCGGCAACg < 1:1893494/150‑1 (MQ=255) cTTGGATCTGACGGTGGGGCAGTTTTTATATTTGAATGTGCGTCTTTTTTATAGGGACACGTTACAGCCGGGCTGAGCGTTAAAGCACATAAAAAAAGCCGCTGATCGGCAGCGGCTTTAAAAGGCTAACATATCGGCACCGGGGGTGcc > 2:2257956/1‑150 (MQ=255) cTTGGATCTGACGGTGGGGCAGTTTTTATATTTGAATGTGCGTCTTTTTTATAGGGACACGTTACAGCCGGGCTGAGCGTTAAAGCACATAAAAAAAGCCGCTGATCGGCAGCGGCTTTAAAAGGCTAACATATCGGCACCGGGGGTGcc > 1:281703/1‑150 (MQ=255) cTTGGATCTGACGGTGGGGCAGTTTTTATATTTGAATGTGCGTCTTTTTTATAGGGACACGTTACAGCCGGGCTGAGCGTTAAAGCACATAAAAAAAGCCGCTGATCGGCAGCGGCTTTAAAAGGCTAACATATCGGCACCGGGGGTGcc > 2:1777362/1‑150 (MQ=255) ttGGATCTGACGGTGGGGCAGTTTTTATATTTGAATGTGCGTCTTTTTTATAGGGACACGTTACAGCCgg < 1:174988/70‑1 (MQ=255) ttGGATCTGACGGTGGGGCAGTTTTTATATTTGAATGTGCGTCTTTTTTATAGGGACACGTTACAGCCgg > 2:174988/1‑70 (MQ=255) ttGGATCTGACGGTGGGGCAGTTTTTATATTTGAATGTGCGTCTTTTTTATAGGGACACGTTACAGCCGGGCTGAGCGTTAAAGCACATAAAAAAAGCCGCTGATCGGCAGCGGCTTTAAAAGGCTAACATATCGGCACCGGGGGTGccc > 1:1080837/1‑150 (MQ=255) tCTGACGGTGGGGCAGTTTTTATATTTGAATGTGCGTCTTTTTTATAGGGACACGTTACAGCCGGGCTGAGCGTTAAAGCACATAAAAAAAGCCGCTGATCGGCAGCGGCTTTAAAAGGCTAACATATCGGCACCGGGGGTGCCCATGGc < 2:609036/150‑1 (MQ=255) gggCAGTTTTTATATTTGAATGTGCGTCTTTTTTATAGGGACACGTTACAGCCGGGCTGAGCGTTAAAGCACATAAAAAAAGCCGCTGATCGGCAGCGGCTTTAAAAGGCTAACATATCGGCACCGGGGGTGCCCATGGCGTAGCCAAgg < 1:1777362/150‑1 (MQ=255) gggCAGTTTTTATATTTGAATGTGCGTCTTTTTTATAGGGACACGTTACAGCCGGGCTGAGCGTTAAAGCACATAAAAAAAGCCGCTGATCGGCAGCGGCTTTAAAAGGCTAACATATCGGCACCGGGGGTGCCCATGGCGTAGCCAAgg < 1:707781/150‑1 (MQ=255) gCAGTTTTTATATTTGAATGTGCGTCTTTTTTATAGGGACACGTTACAGCCGGGCTGAGCGTTAAAGCACATAAAAAAAGCCGCTGAt < 1:1083374/88‑1 (MQ=255) gCAGTTTTTATATTTGAATGTGCGTCTTTTTTATAGGGACACGTTACAGCCGGGCTGAGCGTTAAAGCACATAAAAAAAGCCGCTGAt > 2:1083374/1‑88 (MQ=255) gTTTTTATATTTGAATGTGCGTCTTTTTTATAGGGACACGTTACAGCCGGGCTGAGCGTTAAAGCACATAAAAAAAGCCGCTGATCGGCAGCGGCTTTAAAAGGCTAACATATCGGCACCGGGGGTGCCCATGGCGTAGCCAAGGGaaaa > 2:1534312/1‑150 (MQ=255) gTTTTTATATTTGAATGTGCGTCTTTTTTATAGGGACACGTTACAGCCGGGCTGAGCGTTAAAGCACATAAAAAAAGCCGCTGATCGGCAGCGGCTTTAAAAGGCTAACATATCGGCACCGGGGGTGCCCATGGCGTAGCCAAGGGaaaa < 1:2393476/150‑1 (MQ=255) tttATATTTGAATGTGCGTCTTTTTTATAGGGACACGTTAAAGCCGGGCTGAGCGTTAAAGCACATAAAAAAAGCCGCTGATCGGCAGCGGCTTTAAAAGGCTAACATATCGGCACCGGGGGTGCCCATGGCGTAGCCAAGGGAAAACgg < 1:1155006/150‑1 (MQ=255) tatTTGAATGTGCGTCTTTTTTATAGGGACACGTTACAGCCGGGCTGAGCGTTAAAGCACATAAAAAAAGCCGCTGATCgg > 2:185706/1‑81 (MQ=255) tatTTGAATGTGCGTCTTTTTTATAGGGACACGTTACAGCCGGGCTGAGCGTTAAAGCACATAAAAAAAGCCGCTGATCgg < 1:185706/81‑1 (MQ=255) tatTTGAATGTGCGTCTTTTTTATAGGGACACGTTACAGCCGGGCTGAGCGTTAAAGCACATAAAAAAAGCCGCTGATCGGCAGCGGCTTTAAAAGGCTAACATATCGGCACCGGGGGTGCCCATGGCGTAGCCAAGGGAAAACGGGAGt > 1:2284569/1‑150 (MQ=255) atTTGAATGTGCGTCTTTTTTATAGGGACACGTTACAGCCGGGCTGAGCGTTAAAGCACATAAAAAAAGCCGCTGATCGGCAGCGGCTTTAAAAGGCTAACATATCGGCACCGGGGGTGCCCATGGCGTAGCCAAGGGAAAACGGGAGTa < 2:281703/150‑1 (MQ=255) tttGAATGTGCGTCTTTTTTATAGGGACACGTTACAGCCGGGCTGAGCGTTAAAGCACATAAAAAAAGCCGCTGATCGGCAGCGGCTTTAAAAGGCTAACATATCGGCACCGGGGGTGCCCATGGCGTAGCCAAgg < 2:2050923/136‑1 (MQ=255) tttGAATGTGCGTCTTTTTTATAGGGACACGTTACAGCCGGGCTGAGCGTTAAAGCACATAAAAAAAGCCGCTGATCGGCAGCGGCTTTAAAAGGCTAACATATCGGCACCGGGGGTGCCCATGGCGTAGCCAAgg > 1:2050923/1‑136 (MQ=255) tttGAATGTGCGTCTTTTTTATAGGGACACGTTACAGCCGGGCTGAGCGTTAAAGCACATAAAAAAAGCCGCTGATCGGCAGCGGCTTTAAAAGGCTAACATACCGGCACCCGGGGTGCCCATGGCCTAGCCACGGAAAAACGGGAGCAg > 2:2224073/1‑150 (MQ=255) ttGAATGTGCGTCTTTTTTATAGGGACACGTTACAGCCGGGCTGAGCGTTAAAGCACATAAAAAAAGCCGCTGATCGGCAGCGGCTTTAAAAGGCTAACATATCGGCACCGGGGGTGCCCATGGCGTAGCCAAGGGAAAACGGGAGTAGc < 1:2257956/150‑1 (MQ=255) ttGAATGTGCGTCTTTTTTATAGGGACACGTTACAGCCGGGCTGAGCGTTAAAGCACATAAAAAAAGCCGCTGATCGGCAGCGGCTTTAAAAGGCTAACATATCGGCACCGGGGGTGCCCATGGCGTAGCCAAGGGAAAACGGGAGTAGc < 2:600537/150‑1 (MQ=255) gtgCGTCTTTTTTATAGGGACACGTTACAGCCGGGCTGAGCGTTAAAGCACATAAAAAAAGCCGCTGATCGGCAGCGGCTTTAAAAGGCTAACATATCGGCACCGGGGGTGCCCATGGCGTAGCCAAGGGAAAACGGGAGTAGCGACAgc > 2:922255/1‑150 (MQ=255) gTCTTTTTTATAGGGACACGTTACAGCCGGGCTGAGCGTTAAAGCACATaaaaaaa < 2:1800209/56‑1 (MQ=255) gTCTTTTTTATAGGGACACGTTACAGCCGGGCTGAGCGTTAAAGCACATaaaaaaa > 1:1800209/1‑56 (MQ=255) gTCTTTTTTATAGGGACACGTTACAGCCGGGCTGAGCGTTAAAGCACATAAAAAAAGCCGCTGATCGGCAGCGGCTTTAAAAGGCTAACATATCGGCACCGGGGGTGCCCATGGCGTAGCCAAGGGAAAACGGGAGTAGCGACAGCGCGt < 1:922255/150‑1 (MQ=255) caagTTACAGCCGGGCTGAGCGTTAAAAAAAATAAAAAAAGCCGCTGATCGGCAGCGGCTTTAAAAGGCTAACATATCGGCACCGGGGGTGCCCATGGCGTAGCCAAGGGAAAACGGGAGTAGCGACAGCGCGTGATCAGCTGTCGGCAc < 2:924133/147‑1 (MQ=255) acGTTACAGCCGGGCTGAGCGTTAAAGCACATAAAAAAAGCCGCTGATCGGCAGCGGCTTTAAAAGGCTAACATATCGGCACCGGGGGTGCCCATGGCGTAGCCAAGGGAAAACGGGAGTAGCGACAGCGCGTGATCAGCTGTCGGCACt > 1:1707129/1‑150 (MQ=255) acGTTAAAGCCGGGCTGAGCGTTAAAGCACATAAAAAAAGCCGCTGATCGGCAGCGGCTTTAAAAGGCTAACATATCGGCACCGGGGGTGCCCATGGCGTa < 1:1413835/101‑1 (MQ=255) acGTTAAAGCCGGGCTGAGCGTTAAAGCACATAAAAAAAGCCGCTGATCGGCAGCGGCTTTAAAAGGCTAACATATCGGCACCGGGGGTGCCCATGGCGTa > 2:1413835/1‑101 (MQ=255) cGTTACAGCCGGGCTGAGCGTTAAAGCACATAAAAAAAGCCGCTGATCGGCAGCGGCTTTAAAAGGCTAACATATCGGCACCGGGGGTGCCCATGGCGTAGCCAAGGGAAAACGGGAGTAGCGACAGCGCGTGATCAGCTGTCGGCACTg < 1:1445761/150‑1 (MQ=255) cGTTACAGCCGGGCTGAGCGTTAAAGCACATAAAAAAAGCCGCTGATCGGCAGCGGCTTTAAAAGGCTAACATATCGGCACCGGGGGTGCCCATGGCGTAGCCAAGGGAAAACGGGAGTAGCGACAGCGCGTGATCAGCTGTCGGCACTg < 2:964823/150‑1 (MQ=255) | GCCTGGGCGGCGAAAGGGATCGTTGCAGTCAACGCAATGAAAAGCGGGGTAAAACGAAACGCGGAAGGCACCGGTACTAGCTCCTTGGATCTGACGGTGGGGCAGTTTTTATATTTGAATGTGCGTCTTTTTTATAGGGACACGTTACAGCCGGGCTGAGCGTTAAAGCACATAAAAAAAGCCGCTGATCGGCAGCGGCTTTAAAAGGCTAACATATCGGCACCGGGGGTGCCCATGGCGTAGCCAAGGGAAAACGGGAGTAGCGACAGCGCGTGATCAGCTGTCGGCACTG > NC_002947/919032‑919323 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |