Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 937,766 A→T 7.8% L2620Q (CTG→CAG)  PP_0806 ← surface adhesion protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_002947937,7660AT 7.8% 282.1 / 12.1 90L2620Q (CTG→CAG) PP_0806surface adhesion protein
Reads supporting (aligned to +/- strand):  ref base A (47/36);  new base T (3/4);  total (50/40)
Fisher's exact test for biased strand distribution p-value = 6.95e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.63e-01

GAGCAGAACCGCTGATGCTGCTGCCATCGGCAGCGACGACCAGTTCGCTCGGGCTGGTCGGCGTGACCACCAGTGGCACGTCGTAGGTCAGCGCTTCAGAGGCGTTGCCGCTCGGGTCGGTCTGTACCAGGCTCAGGCGTTCACCCGGCAGCGCAGCCGGGTCGAGGTCGATCAGGAAAGTACCGTTCGCGGTCACTGTGCCGGTACCGACCAGCGTGCCATTGGCATCGCGCACCTCGACGGTAGCACCGGCTTCGCCGCGACCGCCCAAGGTCAGGCCGTCGGCGCCGACGA  >  NC_002947/937617‑937910
                                                                                                                                                     |                                                                                                                                                
gAGCAGAACCGCTGATGCTGCTGCCATCGGCAGCGACGACCAGTTCGCTCGGGCTGGTCGGCGTGACCACCAGTGGCACGTCGTAGGTCAGCGCTTCAGAGGCGTTGCCGCTCGGGTCGGTCTGTACCAGGCTCAGGCGTTCACCCGgca                                                                                                                                                  <  1:399955/150‑1 (MQ=255)
 aGCAGAACCGCTGATGCTGCTGCCATCGGCAGCGACGACCAGTTCGCTCGGGCTGGTCGGCGTGACCACCAGTGGCACGTCGTAGGTCAGCGCTTCAGAGGCGTTGCCGCTCGGGTCGGTCTGTACCAGGCTCAGGCGTTCACCCGgcag                                                                                                                                                 >  1:1682460/1‑150 (MQ=255)
   cAGAACCGCTGATGCTGCTGCCATCGGCAGCGACGACCAGTTCGCTCGGGCTGGTCGGCGTGACCACCAGTGGCACGTCGTAGGTCAGCGCTTCAGAGGCGTTGCCGCTCGGGTCGGTCTGTACCAGGCTCAGGCGTTCACCCGgcagcg                                                                                                                                               >  1:622879/1‑150 (MQ=255)
          gCTGATGCTGCTGCCATCGGCAGCGACGACCAGTTCGCTCGGGCTGGTCGGCGTGACCACCAGTGGCACGTCGTAGGTCAGCGCTTCAGAGGCGTTGCCGCTCGGGTCGGTCTGTACCAGGCTCAGGCGTTCACCCGGCAGCGCAGCCgg                                                                                                                                        <  1:360633/150‑1 (MQ=255)
           cTGATGCTGCTGCCATCGGCAGCGACGACCAGTTCGCTCGGGCTGGTCGTCGTGACCACCAGTGGCACGTCGTAGGTCAGCGCTTCAGAGGCGTTGCCGCTCGGGTCGGTCTGTACCAGGCTCAGGCGTTCACCCGGCTGCGCTGCCggg                                                                                                                                       <  1:2105734/150‑1 (MQ=255)
           cTGATGCTGCTGCCATCGGCAGCGACGACCAGTTCGCTCGGGCTGGTCGGCGTGACCACCAGTGGCACGTCGTAGGTCAGCGCTTCAGAGGCGTTGCCGCTCGGGTCGGTCTGTACCAGGCTCAGGCGTTCACCCGGCAGCGCAGCCggg                                                                                                                                       <  1:2150318/150‑1 (MQ=255)
             gATGCTGCTGCCATCGGCAGCGACGACCAGTTCGCTCGGGCTGGTCGGCGTGACCACCAGTGGCACGTCGTAGGTCAGCGCTTCAGAGGCGTTGCCGCTCGGGTCGGTCTGTACCAGGCTCAGGCGTTCACCCGGCAGCGCAGCCGggtc                                                                                                                                     <  1:1315157/150‑1 (MQ=255)
               tgctgctgcCATCGGCAGCGACGACCAGTTCGCTCGGGCTGGTCGGCGTGACCACCAGTGGCACGTCGTAGGTCAGCGCTTCAGAGGCGTTGCCGCTCGGGTCGGTCTGTCCCAGGCTCAGGCGTTCACCCGGCAGCGCAGCCGggtcga                                                                                                                                   <  1:958535/150‑1 (MQ=255)
               tgctgctgcCATCGGCAGCGACGACCAGTTCGCTCGGGCTGGTCGGCGTGACCACCAGTGGCACGTCGTAGGTCAGCGCTTCAGAGGCGTTGCCGCTCGGGTCGGTCTGTACCAGGTTCCCGCTGTCACCCGGCAGCGCAGCCGggtcga                                                                                                                                   <  1:64391/150‑1 (MQ=255)
               tgctgctgcCATCGGCAGCGACGACCAGTTCGCTCGGGCTGGTCGGCGTGACCACCAGTGGCACGTCGTAGGTCAGCGCTTCAGAGGCGTTGCCGCTCGGGTCGGTCTGTACCAGGCTCAGGCGTTCACCCGGCTGCGCTGCCGggtgaa                                                                                                                                   <  1:423572/150‑4 (MQ=255)
                gctgctgcCATCGGCAGCGACGACCAGTTCGCTCGGGCTGGTCGGCGTGACCACCAGTGGCACGTCGTAGGTCAGCGCTTCAGAGGCGTTGCCGCTCGGGTCGGTCTGTACCAGGCTCAGGCGTTCACCCGGCTGCGCTGCCGggtgaac                                                                                                                                  <  2:653467/150‑5 (MQ=255)
                 ctgctgcCATCGGCAGCGACGACCAGTTCGCTCGGGCTGGTCGGCGTGACCACCAGTGGCACGTCGTAGGTCAGCGCTTCAGAGGCGTTGCCGCTCGGGTCGGTCTGTACCAGGCTCAGGCGTTCACCCGGCAGCGCAGCCGggtcgagg                                                                                                                                 <  2:109538/150‑1 (MQ=255)
                  tgctgcCATCGGCAGCGACGACCAGTTCGCTCGGGCTGGTCGGCGTGACCACCAGTGGCACGTCGTAGGTCAGCGCTTCAGAGGCGTTGCCGCTCGGGTCGGTCTGTACCAGGCTCAGGCGTTCACCCGGCAGCGCAGCCGggtcgaggt                                                                                                                                <  2:622879/150‑1 (MQ=255)
                  tgctgcCATCGGCAGCGACGACCAGTTCGCTCGGGCTGGTCGGCGTGACCACCAGTGGCACGTCGTAGGTCAGCGCTTCAGAGGCGTTGCCGCTCGGGTCGGTCTGTACCAGGCTCAGGCGTTCACCCGGCAGCGCAGCCGggtcgaggt                                                                                                                                >  1:1941591/1‑150 (MQ=255)
                          gcGGCAGCGACGACCAGTTCGCTCGGGCTGGTCGGCGTGACCACCAGTGGCACGTCGTAGGTCAGCGCTTCAGAGGCGTTGCCGCTCGGGTCGGTCTGTACCAGGCTCAGGCGTTCACCCGGCAGCGCAGCCGGGTCGAGGTCGATCAgg                                                                                                                        <  2:1264088/149‑1 (MQ=255)
                             gCAGCGACGACCTGTTCGCTGGGGCTGGTCGGCGTGACCACCAGTGGCACGTCGTAGGTCAGCGCTTCAGAGGCGTTGCCGCTCGGGTCCGTCTGTACCAGGCTCAGGCGTTCACCCGGCAGCGCAGCCGGGTCGAGGTCGATGAGGaaa                                                                                                                     <  2:41523/150‑1 (MQ=255)
                             gCAGCGACGACCAGTTCGCTCGGGCTGGTCGGCGTGACCACCAGTGGCACGTCGTAGGTCAGCGCTTCAGAGGCGTTGCCGCTCGGGTCGGTCTGTACCAGGCTCAGGCGTTCACCCGGCAGCGCAGCCGGGTCGAGGTCGATCAGGaaa                                                                                                                     <  1:2236311/150‑1 (MQ=255)
                                  gacgacCGGTTCGCTCGGGTTGGTCGGCGTGACCACCAGTGGCACGTCGTAGGTCAGCGCTTCAGAGGCGTTGCCGCTCGGGTCGGTCTGTACCAGGCTCAGGCGTTCACCCGGCAGCGCAGCCGGGTCGAGGTCGATCAGGAAAGTAcc                                                                                                                <  1:568968/150‑1 (MQ=255)
                                  gacgacCAGTTCGCTCGGGCTGGTCGGCGTGACCACCCGTGGCACGTCGTAGGTCAGCGCTTCAGAGGCGTTGCCGCTCGGGTCGGTCTGTACCAGGCTCAGGCGTTCACCCGGCAGCGCAGCCGGGTCGAGGTCGATCAGGAAAGTAcc                                                                                                                >  1:980913/1‑150 (MQ=255)
                                  gacgacCAGTTCGCTCGGGCTGGTCGGCGTGACCACCAGTGGCACGTCGTAGGTCAGCGCTTCAGAGGCGTTGCCGCTCGGGTCGGTCTGTACCAGGCTCAGGCGTTCACCCGGCAGCGCAGCCGGGTCGAGGTCGATCAGGAAAGTAcc                                                                                                                >  2:1862364/1‑150 (MQ=255)
                                     gacCAGTTCGCTCGGGCTGGTCGGCGTGACCACCAGTGGCACGTCGTAGGTCAGCGCTTCAGAGGCGTTGCCGCTCGGGTCGGTCTGTACCAGGCTCAGGCGTTCACCCGGCTGCGCTGCCGggtgaa                                                                                                                                   >  1:1904288/1‑125 (MQ=255)
                                     gacCAGTTCGCTCGGGCTGGTCGGCGTGACCACCAGTGGCACGTCGTAGGTCAGCGCTTCAGAGGCGTTGCCGCTCGGGTCGGTCTGTACCAGGCTCAGGCGTTCACCCGGCTGCGCTGCCGggtgaa                                                                                                                                   <  2:1904288/128‑4 (MQ=255)
                                     gacCAGTTCGCTCGGGCTGGTCGGCGTGACCACCAGTGGCACGTCGTAGGTCAGCGCTTCAGAGGCGTTGCCGCTCGGGTCGGTCTGTACCAGGCTCAGGCGTTCACCCGGCAGCGCAGCCGGGTCGAGGTCGATCAGGaaa                                                                                                                     >  2:2328048/1‑142 (MQ=255)
                                     gacCAGTTCGCTCGGGCTGGTCGGCGTGACCACCAGTGGCACGTCGTAGGTCAGCGCTTCAGAGGCGTTGCCGCTCGGGTCGGTCTGTACCAGGCTCAGGCGTTCACCCGGCAGCGCAGCCGGGTCGAGGTCGATCAGGaaa                                                                                                                     <  1:2328048/142‑1 (MQ=255)
                                     gacCAGTTCGCTCGGGCTGGTCGGCGTGACCACCAGTGGCACGTCGTAGGTCAGCGCTTCAGAGGCGTTGCCGCTCGGGTCGGTCTGTACCAGGCTCAGGCGTTCACCCGGCAGCGCAGCCGGGTCGAGGTCGATCAGGAAAGTACCGtt                                                                                                             >  1:990507/1‑150 (MQ=255)
                                       ccAGTTCGCTCGGGCTGGTCGGCGTGACCACCAGTGGCACGTCGTAGGTCAGCGCTTCAGAGGCGTTGCCGCTCGGGTCGGTCTGTACCAGGCTCAGGCGTTCACCCGGCAGCGCAGCCGGGTCGAGGTCGATCAGGAAAGTACCGTTcg                                                                                                           <  2:1586457/150‑1 (MQ=255)
                                       ccAGTTCGCTCGGGCTGGTCGGCGTGACCACCAGTGGCACGTCGTAGGTCAGCGCTTCAGAGGCGTTGCCGCGCGGGGCGGTCTGTACCAGGCTCAGGCGTTCACCCGGCAGCGCAGCCGGGTCGAGGACGATTAGGAAAGTACCGTTcg                                                                                                           >  1:1931298/1‑150 (MQ=255)
                                        cAGTTCGCTCGGGCTGGTCGGCGTGACCACCAGTGGCACGTCGTAGGTCAGCGCTTCAGAGGCGTTGCCGCTCGGGTCGGTCTGTACCAGGCTCAGGCGTTCACCCGGCAGCGCAGCCGGGTCGAGGTCGATCAGGAAAGTACCGTTcgc                                                                                                          >  2:1976331/1‑150 (MQ=255)
                                        cAGTTCGCTCGGGCTGGTCGGCGTGACCACCAGTGGCACGTCGTAGGTCAGCGCTTCAGAGGCGTTGCCGCTCGGGTCGGTCTGTACCAGGCTCAGGCGTTCAACCGGCAGCGCAGCCGTGTCGAGGTCGATCAGGAAAGTACCGTTcgc                                                                                                          >  2:396112/1‑150 (MQ=255)
                                          gTTCGCTCGGGCTGGTCGGCGTGACCACCAGTGGCACGTCGTAGGTCAGCGCTTCAGAGGCGTTGCCGCTCGGGTCGGTCTGTACCAGGCTCAGGCGTTCACCCGGCAGCGCAGCCGGGTCGAGGTCGATCAGGAAAGTACCGTTCGCgg                                                                                                        <  2:1081309/150‑1 (MQ=255)
                                               cTCGGGCTGGTCTGTGTGACCACCAGTGGCACTTCGTAGGTCATCGCTTCAGAGGCCTTGCCGCTCGGGTCGGTCTGTACCAGGCTCAGGCGTTCACCCGGCAGCGCAGCCGGGTCGAGGTCGATCAGGAAAGTACCGTTCGCGGTCACt                                                                                                   <  2:990507/150‑1 (MQ=255)
                                                   ggCTGGTCGGCGTGACCACCAGTGGCACGTCGTAGGTCAGCGCTTCAGAGGCGTTGCCGCTCGGGTCGGTCTGTACCAGGCTCAGGCGTTCACCCGGCAGCGCAGCCGGGTCGAGGTCGATCAGGAAAGTACCGTTCGCGGTCACtgtg                                                                                                <  1:644781/149‑1 (MQ=255)
                                                   ggCTGGTCGGCGTGACCACCAGTGGCACGTCGTAGGTCAGCGCTTCAGAGGCGTTGCCGCTCGGGTCGGTCTGTACCAGGCTCAGGCGTTCACCCGGCAGCGCAGCCGGGTCGAGGTCGATCAGGAAAGTACCGTTCGCGGTCACtgtg                                                                                                >  2:644781/1‑149 (MQ=255)
                                                       ggTCGGCGTGACCACCAGTGGCACGTCGTAGGTCAGCGCTTCAGAGGCGTTGCCGCTCGGGTCGGTCTGTACCAGGCTCAGGCGTTCACCCGGCAGCGCAGCCGGGTCGAGGTCGATCAGGAAAGTACCGTTCGCGGTCACTGTGCCGGt                                                                                           <  2:1323526/150‑1 (MQ=255)
                                                         tCGGCGTGACCACCAGTGGCACGTCGTAGGTCAGCGCTTCAGAGGCGTTGCCGCTCGGGTCGGTCTGTACCAGGCTCAGGCGTTCACCCGGCAGCGCAGCCGGGTCGAGGTCGATCAGGAAAGTACCGTTCGCGGTCACTGTGCCGGTAc                                                                                         >  2:1559737/1‑150 (MQ=255)
                                                          cGGCGTGACCACCAGTGGCACGTCGTAGGTCAGCGCTTCAGAGGCGTTGCCGCTCGGGTCGGTCTGTACCAGACTCAGGCGTTCACCCGGCAGCGCAGCCGGGTCGAGGTCGATCAGGAAAGTACCGTTCGCGGTCACTGTGCCGGTAcc                                                                                        <  2:2238191/150‑1 (MQ=255)
                                                            gCGTGACCACCAGTGGCACGTCGTAGGTCAGCGCTTCAGAGGCGTTGCCGCTCGGGTCGGTCTGTACCAGGCTCAGGCGTTCACCCGGCAGCGCAGCCGGGTCGAGGTCGATCAGGAAAGTACCGTTCGCGGTCACTGTGCCGGTACCGa                                                                                      >  2:1029579/1‑150 (MQ=255)
                                                               tGACCACCAGTGGCACGTCGTAGGTCAGCGCTTCAGAGGCGTTGCCGCTCGGGTCGGTCTGTACCAGGCTCAGGCGTTCACCCGGCAGCGCAGCCGGGTCGAGGTCGATCAGGAAAGTACCGTTCGCGGTCACTGTGCCGGTACCGACCa                                                                                   <  1:1976331/150‑1 (MQ=255)
                                                                 accaccAGTGGCACGTCGTAGGTCAGCGCTTCAGAGGCGTTGCCGCTCGGGTCGGTCTGTACCAGGCTCAGGCGTTCACCCGGCAGCGCAGCCGGGTCGAGGTCGATCAGGAAAGTACCGTTCGCGGTCACTGTGCCGGTACCGACCAGc                                                                                 <  1:177770/150‑1 (MQ=255)
                                                                   caccaGTGGCACGTCGTAGGTCAGCGCTTCAGAGGCGTTGCCGCTCGGGTCGGTCTGTACCAGGCTCAGGCGTTCACCCGGCAGCGCAGCCGGGTCGAGGTCGATCAGGAAAGTACCGTTCGCGGTCACTGTGCCGGTACCGACCAGCGt                                                                               >  1:1316493/1‑150 (MQ=255)
                                                                   caccaGTGGCACGTCGTAGGTCAGCGCTTCAGAGGCGTTGCCGCTCGGGTCGGTCTGTACCAGGCTCAGGCGTTCACCCGGCAGCGCAGCCGGGACGAGGTCGATCAGGAAAGTACCGTTCGCGGTCACTATGCCGGTACCGACCAGCGt                                                                               >  1:859819/1‑150 (MQ=255)
                                                                    accaGTGGCACGTCGTAGGTCAGCGCTTCAGAGGCGTTGCCGCTCGGGTCGGTCTGTACCAGGCTCAGGCGTTCACCCGGCAGCGCAGCCgg                                                                                                                                        >  1:1591943/1‑92 (MQ=255)
                                                                    accaGTGGCACGTCGTAGGTCAGCGCTTCAGAGGCGTTGCCGCTCGGGTCGGTCTGTACCAGGCTCAGGCGTTCACCCGGCAGCGCAGCCgg                                                                                                                                        <  2:1591943/92‑1 (MQ=255)
                                                                     ccaGTGGCACGTCGTAGGTCAGCGCTTCAGAGGCGTTGCCGCTCGGGTCGGTCTGTACCAGGCTCAGGCGTTCACCCGGCAGCGCAGCCGGGTCGAGGTCGATCAGGAAAGTACCGTTCGCGGTCACTGTGCCGGTACCGACCAGCGTGc                                                                             <  1:1263848/150‑1 (MQ=255)
                                                                        gTGGCACGTCGTAGGTCAGCGCTTCAGAGGCGTTGCCGCTCGGGTCGGTCTGTACCAGGCTCAGGCGTTCACCCGGCAGCGCAGCCGGGTCGAGGTCGATCAGGAAAGTACCGTTCGCGGTCACTGTGCCGGTACCGACCAGCGTGCCAt                                                                          >  1:1512880/1‑150 (MQ=255)
                                                                         cggCACGTAGTAGGTCAGCGCTTCAGAGGCGTTGCCGCTCGGGTCGGTCTGTACCAGGCTCAGGCGTTCACCCGGCAGCGCAGCCGGGTCGAGGTCGATCAGGAAAGTACCGTTCGCGGTCACTGTGCCGGTACCGACCAGCGTGCCAtt                                                                         <  1:865472/149‑1 (MQ=255)
                                                                           gCACGTCGTAGGTCAGCGCTTCAGAGGCGTTGCCGCTCGGGTCGGTCTGTACCAGGCTCAGGCGTTCACCCGGCAGCGCAGCCGGGTCGAGGTCGATCAGGAAAGTACCGTTCGCGGTCACTGTGCCGGTACCGACCAGCGTGCCATTgg                                                                       >  2:2341373/1‑150 (MQ=255)
                                                                           gCACGTCGTAGGTCAGCGCTTCAGAGGCGTTGCCGCTCGGGTCGGTCTGTACCAGGCTCAGGCGTTCACCCGGCAGCGCAGCCGGGTCGAGGTCGATCAGGAAAGTACCGTTCGCGGTCACTGTGCCGGTACCGACCAGCGTGCCATTgg                                                                       <  2:980913/150‑1 (MQ=255)
                                                                            cACGTCGTAGGTCAGCGCTTCAGAGGCGTTGCCGCTCGGGTCGGTCTGTACCAGGCTCAGGCGTTCACCCGGCAGCGCAGCCGGGTCGAGGTCGATCAGGAAAGTACCGTTCGCGGTCACTGTGCCGGTACCGACCAGCGTGCCAtt                                                                         <  2:257157/147‑1 (MQ=255)
                                                                            cACGTCGTAGGTCAGCGCTTCAGAGGCGTTGCCGCTCGGGTCGGTCTGTACCAGGCTCAGGCGTTCACCCGGCAGCGCAGCCGGGTCGAGGTCGATCAGGAAAGTACCGTTCGCGGTCACTGTGCCGGTACCGACCAGCGTGCCAtt                                                                         >  1:257157/1‑147 (MQ=255)
                                                                             aCGTCGTAGGTCAGCGCTTCAGAGGCGTTGCCGCTCGGGTCGGTCGGTACCAGGCTCAGGCGTTCACCCGGCAGCGCAGCCGGGTCGAGGTCGATCAGGAAAGTACCGTTCGCGGTCACTGTGCCGGTACCGACCAGCGTGCCATTGGCa                                                                     >  2:1070470/1‑150 (MQ=255)
                                                                               gtcgtAGGTCAGCGCTTCAGAGGCGTTGNNGCTCGGGTCGGTCTNTNCNAGGCTCAGGCGTTCACCCGGCAGCGCAGCCGGGTCGAGGTCGATCAGGAAAGTACCGTTCGCGGTCACTGTGCCGGTACCGACCAGCGTGCCATTGGCATc                                                                   >  1:1690847/1‑150 (MQ=255)
                                                                                  gtAGGCCAGCGCTTCAGAGGCGTTGCCGCTCGGGTCGGTCTGTACCAGGCTCAGGCGTTCACCCGGCAGCGCAGCCGGGTCGAGGTCGATCAGGAAAGTACCGTTCGCGGTCACTGTGCCGGTACCGACCAGCGTGCCATTGGCATcgcg                                                                >  2:1252244/1‑150 (MQ=255)
                                                                                     ggTCAGCGCTTCAGAGGCGTTGCCGCTCGGGTCGGTCTGTACCAGGCTCAGGCGTTCACCCGGCAGCGCAGCCGGGTCGAGGTCGATCAGGAAAGTACCGTTCGCGGTCACTGTGcc                                                                                              >  2:1145354/1‑117 (MQ=255)
                                                                                     ggTCAGCGCTTCAGAGGCGTTGCCGCTCGGGTCGGTCTGTACCAGGCTCAGGCGTTCACCCGGCAGCGCAGCCGGGTCGAGGTCGATCAGGAAAGTACCGTTCGCGGTCACTGTGcc                                                                                              <  1:1145354/117‑1 (MQ=255)
                                                                                     ggTCAGCGCTTCAGAGGCGTTGCCGCTCGGGTCGGTCTGTACCAGGCTCAGGCGTTCACCCGGCAGCGCAGCCGGGTCGAGGTCGATCAGGAAAGTACCGTTCGCGGTCACTGTGCCGGTACCGACCAGCGTGCCATTGGCATCGCGCAc                                                             <  1:2176145/150‑1 (MQ=255)
                                                                                      gTCAGCGCTTCAGAGGCGTTGCCGCTCGGGTCGGTCTGTACCAGGCTCAGGCGCTCACCCGgcagc                                                                                                                                                <  2:304223/66‑1 (MQ=255)
                                                                                      gTCAGCGCTTCAGAGGCGTTGCCGCTCGGGTCGGTCTGTACCAGGCTCAGGCGCTCACCCGgcagc                                                                                                                                                >  1:304223/1‑66 (MQ=255)
                                                                                       tCAGCGCTTCAGAGGCGTTGCCGCTCGGGTCGGTCTGTACCAGGCTCAGGCGTTCACCCGGCAGCGCAGCCGGGTCGAGGTCGATCAGGAAAGTACCGTTCGCGGTCACTGTGCCGGTACCGACCAGCGt                                                                               <  1:1276223/130‑1 (MQ=255)
                                                                                       tCAGCGCTTCAGAGGCGTTGCCGCTCGGGTCGGTCTGTACCAGGCTCAGGCGTTCACCCGGCAGCGCAGCCGGGTCGAGGTCGATCAGGAAAGTACCGTTCGCGGTCACTGTGCCGGTACCGACCAGCGt                                                                               >  2:1276223/1‑130 (MQ=255)
                                                                                         aGCGCTTCAGAGGCGTTGCCGCTCGGGTCGGTCTGTACCAGGCTCAGGCGTTCACCCGGCAGCGCAGCCGGGTCGAGGTCGATCAGGAAAGTACCGTTCGCGGTCACTGTGCCGGTACCGACCAGCGTGCCATTGGCATCGCGCACCTCg                                                         >  2:2203590/1‑150 (MQ=255)
                                                                                          gcgcTTCAGGGGCGTTGCCGCTCGGGTCGGTCTGTACCAGGCTCAGGCGTTCACCCGGCAGCGCAGCCGGGTCGAGGTCGATCAGGAAAGTACCGTTCGCGGTCACTGTGCCGGTACCGACCAGCGTGCCATTGGCATCGCGCACCTCGa                                                        >  2:2216718/1‑150 (MQ=255)
                                                                                          gcgcTTCAGAGGCGTTGCCGCTCGGGTCGGTCTGTACCAGGCTCAGGCGTTCACCCGGCAGCGCAGCCGGGTCGAGGTCGATCAGGAAAGTACCGTTCGCGGTCACTGTGCCGGTACCGACCAGCGTGCCATTGGCATCGCGCACCTCGa                                                        >  1:860218/1‑150 (MQ=255)
                                                                                            gcTTCAGATGCGTTGCCTGTCGGGGCGGTCTGTACCAGGCTCAGGCGTTCACCCGGCAGCGCAGCCGGGTCGAGGTCGATCAGGAAAGTACCGTTCGCGGTCACTGTGCCGGTACCGACCAGCGTGCCATTGGCATCGCGCACCTCGACg                                                      <  2:1941591/150‑1 (MQ=255)
                                                                                            gcTTCAGAGGCGTTGCCGCTCGGGTCGGTCTGTACCAGGCTCAGGCGTTCACCCGGCAGCGCAGCCGGGTCGAGGTCGATCAGGAAAGTACCGTTCGCGGTCACTGTGCCGGTACCGACCAGCGTGCCATTGGCATCGCGCACCTCGACg                                                      >  1:373885/1‑150 (MQ=255)
                                                                                              ttCAGAGGCGTTGCCGCTCGGGTCGGTCTGTACCAGGCTCAGGCGTTCACCCGGCAGCGCAGCCGggtcgaggt                                                                                                                                <  2:1200548/74‑1 (MQ=255)
                                                                                              ttCAGAGGCGTTGCCGCTCGGGTCGGTCTGTACCAGGCTCAGGCGTTCACCCGGCAGCGCAGCCGggtcgaggt                                                                                                                                >  1:1200548/1‑74 (MQ=255)
                                                                                               tCAGAGGCGTTGCCGCTCGGGTCGGTCTGTACCAGGCTCAGGCGTTCACCCGGCAGCGCAGCCGGGTCGAGGTCGATCAGGAAAGTACCGTTCGCGGTCACTGTGCCGGTACCGACCAGCGTGCCATTGGCATCGCGCACCTCGACGGTa                                                   <  2:373885/150‑1 (MQ=255)
                                                                                                          gCCGCTCGGGTCGGTCTGTACCAGGCTCAGGCGTTCACCCGGCAGCGCAGCCGGGTCGAGGTCGATCAGGAAAGTACCGTTCGCGGTCACTGTGCCGGTACCGACCAGCGTGCCATTGGCATc                                                                   <  2:993689/123‑1 (MQ=255)
                                                                                                          gCCGCTCGGGTCGGTCTGTACCAGGCTCAGGCGTTCACCCGGCAGCGCAGCCGGGTCGAGGTCGATCAGGAAAGTACCGTTCGCGGTCACTGTGCCGGTACCGACCAGCGTGCCATTGGCATc                                                                   >  1:993689/1‑123 (MQ=255)
                                                                                                          gCCGCTCGGGTCGGTCTGTACCAGGCTCAGGCGTTCACCCGGCAGCGCAGCCGGGTCGAGGTCGATCAGGAAAGTACCGTTCGCGGTCACTGTGCCGGTACCGACCAGCGTGCCATTGGCATCGCGCACCTCGACGGTAGCACCGGCTTc                                        >  1:1482566/1‑150 (MQ=255)
                                                                                                             gCTCGGGTCGGTCTGTACCAGGCTCAGGCGTTCACCCGGCAGCGCAGCCGGGTCGAGGTCGATCAGGAAAGTACCGTTCGCGGTCACTGTGCCGGTACCGACCAGCGTGCCATTGGCATCGCGCACCTCGACGGTAGCACCGGCTTcgcc                                     >  1:764098/1‑150 (MQ=255)
                                                                                                                 gggTCGGTCTGTACCAGGCTCAGGCGTTCACCCGGCAGCGCAGCCGGGTCGAGGTCGATCAGGAAAGTACCGTTCGCGGTCACTGTGCCGGTACCGACCAGCGTGCCATTGGCATCGCGCACCTCGACGGTAGCACCGGCTTCGCCGCGa                                 <  2:1482566/150‑1 (MQ=255)
                                                                                                                  ggtcggtcTGTACCAGGCTCAGGCGTTCACCCGGCAGCGCAGCCGGGTCGAGGTCGATCAGGAAAGTACCGTTCGCGGTCACTGTGCCGGTACCGACCAGCGTGCCATTGGCATCGCGCACCTCGACGGTAGCACCGGCTTCGCCGCGAc                                >  1:507212/1‑150 (MQ=255)
                                                                                                                        tcTGTACCAGGCTCAGGCGTTCACCCGGCAGCGCAGCCGGGTCGAGGTCGATAAGGAAAGTACCGTTCGCGGTCACTGTGCCGGTACCGACCAGCGTGCCATTGACATCGCGCACCTCGACGGTAGCACCGGCTTCGCCGCGACCGCCCa                          >  2:566049/1‑150 (MQ=255)
                                                                                                                        tcTGTACCAAGATCAGGCGTTCACCCGGCAGCGCAGCCGGGTCGAGGTCGATCAGGAAAGTACCGTTCGCGGTCACTGTGCCGGTACCGACCAGCGTGCCATTGGCATCGCGCACCTCGACGGTAGCACCGGCTTCGCCGCGACCGCCCa                          >  2:1297605/1‑150 (MQ=255)
                                                                                                                           gTACCAGGCTCAGGCGTTCACCCGGCAGCGCAGCCGGGTCGAGGTCGATCAGGAAAGTACCGTTCGCGGTCACTGTGCCGGTACCGACCAGCGTGCCATTGGCATCGCGCACCTCGACGGTAGCACCGGCTTCGCCGCGACCGCCCAAgg                       >  2:1838392/1‑150 (MQ=255)
                                                                                                                               cAGGCTCAGGCGTTCACCCGGCAGCGCAGCCGGGTCGAGGTCGATCAGGAAAGTACCGTTCGCGGTCACTGTGCCGGAACCAACCAGCGTGCCATTGGCATCGCGCACCTCGACGGTAGCACCGGCTTCGCCGCGCCCGCCCAAGGTCAg                   >  1:1020308/1‑150 (MQ=255)
                                                                                                                                aGGCTCAGGCGTTCACCCGGCAGCGCAGCCGGGTCGAGGTCGATCAGGAAAGTACCGTTCGCGGTCACTGTGCCGGTACCGACCAGCGTGCCATTGGCATCGCGCAACTAGACGGAAGCACCGGCTTCGCCGCGACCGCCCAAGGTCAgg                  <  1:1862364/150‑1 (MQ=255)
                                                                                                                                    tCAGGCGTTCACCCGGCAGCGCAGCCGGGTCGAGGTCGATCAGGAAAGTACCGTTCGCGGTCACTGTGCCGGTACCGACCAGCGTGCCATTGGCATCGCGCACCTCGACGGTAGCACCGGCTTCGCCGCGACCGCCCAAGGTCAGGCCGt              >  2:631628/1‑150 (MQ=255)
                                                                                                                                     cAGGCGTTCACCCGGCAGCGCAGCCGGGTCGAGGTCGATCAGGAAAGTACCGTTCGCGGTCACTGTGCCGGTACCGACCAGCGTGCCATTGGCATCGCGCACCTCGACGGTAGCACCGGCTTCGCCGCGACCGCCCAAGGTCAGGCCGTc             >  1:1760219/1‑150 (MQ=255)
                                                                                                                                     cAGGCGTTCACCCGGCAGCGCAGCCGGGTCGAGGTCGATCAGGAAAGTACCGTTCGCGGTCACTGTGCCGGTACCGACCAGCGTGCCATTGGCATCGCGCACCTCGACGGTAGCACCGGCTTCGCCGCGACCGCCCAAGGTCAGGCCGTc             >  2:461234/1‑150 (MQ=255)
                                                                                                                                      aGGCGTTCACCCGGCAGCGCAGCCGGGTCGAGGTCGATCAGGAAAGTACCGTTCGCGGTCACTGTGCCGGTACCGACCAGCGTGCCATTGGCATCGCGCACCTCGTCGGTAGCACCGGCTTCGCCGCGACCGCCCAAGGTCAGGCCGTCg            >  2:1738394/1‑150 (MQ=255)
                                                                                                                                            tctctctgcagcgcagcCGTGTCTATGTCTATCAGGAAATTACCTTTCGCGGTCACTGTGCCGGTACCGACCAGCATGCCATTGGCATCGCGCACCTCGACGGTAGCACCGGCTTCGCCGCGACCGCCCAAGGTCAGGCCGTCGGCGCcg      <  2:464004/143‑1 (MQ=38)
                                                                                                                                             gaCCCGGCTGCGCTGCCGGGTCGAGGTCGATCAGGAAAGTACCGTTCGCGGTCACTGTGCCGGTACCGACCAGCGTGCCATTGGCATCGCGCACCTCGACGGTAGCACCGGCTTCGCCGCGACCGCCCAAGGTCAGGCCGTCGGCGCcga     >  2:299600/2‑150 (MQ=255)
                                                                                                                                              aCCCGGCAGCGCAGCCGGGTCGAGGTCGATCAGGAAAGTACCGTTCGCGGTCACTGTGCCGGTACCGACCAGCGTGCCATTGGCATCGCGCACCTCGACGGTAGCACCGGCTTCGCCGCGACCGCCCAAGGTCAGGCCGTCGGCGCcgac    >  1:1909360/1‑150 (MQ=255)
                                                                                                                                              aCCCGGCAGCGCAGCCGGGTCGAGGTCGATCAGGAAAGTACCGTTCGCGGTCACTGTGCCGGTACCGACCAGCGTGCCATTGGCATCGCGCACCTCGACGGTAGCACCGGCTTCGCCGCGACCGCCCAAGGTCAGGCCGTCGGCGCcgac    >  1:1345128/1‑150 (MQ=255)
                                                                                                                                              aCCCGGCAGCGCAGCCGGGTCGAGGTCGATCAGGAAAGTACCGTTCGCGGTCACTGTGCCGGTACCGACCAGCGTGCCATTGGCATCGCGCACCTCGACGGTAGCACCGGCTTCGCCGCGACCGCCCAAGGCCAg                   >  2:1020359/1‑135 (MQ=255)
                                                                                                                                              aCCCGGCAGCGCAGCCGGGTCGAGGTCGATCAGGAAAGTACCGTTCGCGGTCACTGTGCCGGTACCGACCAGCGTGCCATTGGCATCGCGCACCTCGACGGTAGCACCGGCTTCGCCGCGACCGCCCAAGGCCAg                   <  1:1020359/135‑1 (MQ=255)
                                                                                                                                               cccGGCTGCGCTGCCGGGTCGAGGTCGATCAGGAAAGTACCGTTCGCGGTCACTGTGCCGGTACCGACCAGCGTGCCATTGGCATCGCGCACCTCGACGGTAGCACCGGCTTCGCCGCGACCGCCCAAGGTCAGGCCGTCGGCGCcgacg   >  1:933862/1‑150 (MQ=255)
                                                                                                                                               cccGGCAGCGCAGCCGGGTCGAGGTCGATCAGGAAAGTACCGTTCGCGGTCACTGTGCCGGTACCGACCAGCGTGCCATTGGCATCGCGCACCTCGACGGTAGCACCGGCTTCGCCGCGACCGCCCAAGGTCAGGCCGTCGGCGCcgacg   >  1:2407878/1‑150 (MQ=255)
                                                                                                                                                ccGGCAGCGCAGCCGGGTCGAGGTCGATCAGGAAAGTACCGTTCGCGGTCACTGTGCCGGTACTGACAAGCGTGCCATTGGGATCGCGCACCTCGACGGTAGCACCGGCTTCGCCGCGACCGACCAAGGTCCGGCCGTCGGCGCcgaaga  >  1:464004/1‑150 (MQ=255)
                                                                                                                                                ccGGCAGCGCAGCCGGGTCGAGGTCGATCAGGAAAGTACCGTTCGCGGTCACTGTGCCGGTACCGACCAGCGTGCCATTGGCATCGCGCACCTCGACGGTAGCACCGGCTTCGCCGCGACCGCCCAAg                        <  2:432090/128‑1 (MQ=255)
                                                                                                                                                ccGGCAGCGCAGCCGGGTCGAGGTCGATCAGGAAAGTACCGTTCGCGGTCACTGTGCCGGTACCGACCAGCGTGCCATTGGCATCGCGCACCTCGACGGTAGCACCGGCTTCGCCGCGACCGCCCAAg                        >  1:432090/1‑128 (MQ=255)
                                                                                                                                                ccGGCAGCGCAGCCGGGTCGAGGTCGATCAGGAAAGTACCGTTCGCGGTCACTGTGCCGGTACCGACCAGCGTGCCATTGGCATCGCGCACCTCGACGGTAGCACCGGCTTCGCCGCGACCGCCCAAGGTCAGGCCGTCGGCGCcgacga  >  2:1276279/1‑150 (MQ=255)
                                                                                                                                                ccGGCAGCGCAGCCGGGTCGAGGTCGATCAGGAAAGTACCGTTCGCGGTCACTGTGCCGGTACCGACCAGCGTGCCATTGGCATCGCGCACCTCGACGGTAGCACCGGCTTCGCCGCGACCGCCCAAGGTCAGGCCGTCGGCGCcgacga  >  2:2073330/1‑150 (MQ=255)
                                                                                                                                                     |                                                                                                                                                
GAGCAGAACCGCTGATGCTGCTGCCATCGGCAGCGACGACCAGTTCGCTCGGGCTGGTCGGCGTGACCACCAGTGGCACGTCGTAGGTCAGCGCTTCAGAGGCGTTGCCGCTCGGGTCGGTCTGTACCAGGCTCAGGCGTTCACCCGGCAGCGCAGCCGGGTCGAGGTCGATCAGGAAAGTACCGTTCGCGGTCACTGTGCCGGTACCGACCAGCGTGCCATTGGCATCGCGCACCTCGACGGTAGCACCGGCTTCGCCGCGACCGCCCAAGGTCAGGCCGTCGGCGCCGACGA  >  NC_002947/937617‑937910

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑