BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_002947	955,589	C→G	6.7%	I76M (ATC→ATG)	alaC →	aminotransferase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	955,589	0	C	G	6.7%	370.6 / 14.3	120	I76M (ATC→ATG)	alaC	aminotransferase
Reads supporting (aligned to +/- strand): ref base C (60/52); new base G (4/4); total (64/56)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.65e-01

Only 100 of 122 total aligned reads displayed.

TCAAGATGGCCGCCCGCCGCCGTGGCGAGGACATCATCGACCTGAGCATGGGCAACCCCGATGGCGCCACCCCGCCGCACATCGTCGAGAAGCTGGTACAGGTCGCCCAGCGTGAAGACACCCACGGCTACTCCACGTCGCGCGGCATCCCGCGCCTGCGCCGGGCCATCTCCAACTGGTACAAGGACCGCTACGAGGTCGACATCGACCCGGAAAGCGAAGCCATCGTCACCATCGGCTCGAAAGAGGGCCTGGCCCACCTGATGCTGGCCACCCTCGACCAGGGCGATACG  >  NC_002947/955441‑955733

tgacgATGGCCGCCCGCCGCCGTGGCGAGGACATCATCGACATGAGCCTGGGCAACCCCGATGGCGCCACCCCGCCGCACATCGTCGAGAAGCTGGTACAGCTCGGCCACCGCGAAGACACCCACGGCTACTCCACGTCGCGCGGCATcc                                                                                                                                                 >  2:923973/5‑150 (MQ=255)

tCAAGATGGCCGCCCGCCGCCGTGGCGAGGACATCATCGACCTGAGCATGGGCAACCCCGATGGCGCCACCCCGCCGCACATCGTCGAGAAGCTGGTACAGGTCGCCCAGCGTGAAGACACCCACGGCTACTCCACGTCGCGCGGCATcc                                                                                                                                                 >  1:1325232/1‑150 (MQ=255)

         ccgcccgcCGCCGTGGCGAGGACATCATCGACCTGAGCATGGGCAACCCCGATGGCGCCACCCCGCCGCACATCGTCGAGAAGCTGGTACAGGTCGCCCAGCGTGAAGACACCCACGGCTACTCCACGTCGCGCGGCATCCCGCGCCTgc                                                                                                                                        >  2:2108718/1‑150 (MQ=255)

          cgcccgccGCCGTGGCGAGGACATCATCGACCTGAGCATGGGCAACCCCGATGGCGCCACCCCGCCGCACATCGTCGAGAAGCTGGTACAGGTCGCCCAGCGTGAAGACACCCACGGCTACTCCATGTCGCGCGGGATGCCgcgcga                                                                                                                                          <  1:1146005/147‑3 (MQ=255)

          cgcccgccGCCGTGGCGAGGACATCATCGACCTGAGCATGGGCAACCCCGATGGCGCCACCCCGCCGCACATCGTCGAGAAGCTGGTACAGGTCGCCCAGCGTGAAGACACCCACGGCTACTCCATGTCGCGCGGGATGCCgcgcga                                                                                                                                          >  2:1146005/1‑145 (MQ=255)

            cccgccGCCGTGGCGAGGACATCATCGACCTGAGCATGGGCAACCCCGATGGCGCCACCCCGCCGCACATCGTCGAGAAGCTGGTACAGGTCGCCCAGCGTGAAGACACCCACGGCTACTCCACGTCGCGCGGCATCCCGCGCCTGCGcc                                                                                                                                     <  2:1458881/150‑1 (MQ=255)

                    cgTGGCGAGGACATCATCGAACCGAGCATGGGCACCCCCGATGGCGCCACCCCGCCGCACATCGTCGAGAAGCTGGTACAGGTCGCCCAGCGTGAAGACACCCACGGCTACTCCACGTCGCGCGGCACCCCGCGCCTGCGCCGGGCCAtc                                                                                                                             <  2:128048/150‑1 (MQ=255)

                          gAGGACATCATCGACCTGAGCATGGGCAACCCCGATGGCGCCACCCCGCCGCACATCGTCGAGAAGCTGGTACAGGTAGCCCAGCGTGAAGACACCCACGGCTACTCCACGTCGCGCGGCATCCCGCGCGTGGGCCGGGCCATCTCCAAc                                                                                                                       <  2:650906/150‑1 (MQ=255)

                             gACATCATCGACCTGAGCATGGGCAACCCCGATGGCGCCACCCCGCCGCACATCGTCGAGAAGCTGGTACAGGTCGCCCAGCGTGAAGACACCCACGGCTACTCCACGTCGCGCGGCATCCCGCGCCTGCGCCGGGCCATCTCCAACTgg                                                                                                                    <  1:998941/150‑1 (MQ=255)

                               catcatCGACCTGAGCATGGGCAACCCCGATGGCGCCACCCCGCCGCACATCGTCGAGAAGCTGGTACAGGTCGCCCAGCGTGAAGACACCCACGGCTACTCCACGTCGCGCGGCATCCCGCGCCTGCGCCGGGCCATCTCCAACTGGTa                                                                                                                  <  1:1801599/150‑1 (MQ=255)

                                atcatcGACCTGAGCATGGGCAACCCCGATGGCGCCACCCCGCCGCACATCGTCGAGAAGCTGGTACAGGTCGCCCAGCGTGAAGACACCCACGGCTACTCCACGTCGCGCGGCATCCCGCGCCTGCGCCGGGCCATCTCCAACTGGTAc                                                                                                                 >  1:1144511/1‑150 (MQ=255)

                                   atcGACCTGAGCATGGGCAACCCCGATGGCGCCACCCCGCCGCACATCGTCGAGAAGCTGGTACAGGTCGCCCAGCGTGAAGACACCCACGGCTACTCCACGTCGCGCGGCATCCCGCGCCTGCGCCGGGCCATCTCCAACTGGTACAAg                                                                                                              <  2:1144511/150‑1 (MQ=255)

                                   atcGACCTGAGCATGGGCAACCCCGATGGCGCCACCCCGCCGCACATCGTCGAGAAGCTGGTACAGGTCGCCCAGCGTGAAGACACCCACGGCTACTCCACGTCGCGCGGCATCCCGCGCCTGCGCCGGGCCATCTCCAACTGGTACAAg                                                                                                              >  1:1944900/1‑150 (MQ=255)

                                   atcGACCTGAGCATGGGCAACCCCGATGGCGCCACCCCGCCGCACATCGTCGAGAAGCTGGTACAGGTCGCCCAGCGTGAAGACACCCACGGCTACTCCACGTCGCGCGGCATCCCGCGCCTGCGCCGGGCCATCTCCAACTGGTACAAg                                                                                                              <  2:1238427/150‑1 (MQ=255)

                                   atcGACCTGAGCATGGGCAACCCCGATGGCGCCACCCCGCCGCACATCGTCGAGAAGCTGGTACAGGTCGCCCAGCGTGAAGACACCCACGGCTACTCCACGTCGCGCGGCATCCCGCGCCTGCGCCGGGCCATCTCCAACTGGTACAAg                                                                                                              >  1:1238427/1‑150 (MQ=255)

                                   atcGACCTGAGCATGGGCAACCCCGATGGCGCCACCCCGCCGCACATCGTCGAGAAGCTGGTACAGGTCGCCCAGCGTGAAGACACCCACGGCTACTCCACGTCGCGCGGCATCCCGCGCCTGCGCCGGGCCATCTCCAACTGGTACAAg                                                                                                              >  2:2381732/1‑150 (MQ=255)

                                   atcGACCTGAGCATGGGCAACCCCGATGGCGCCACCCCGCCGCACATCGTCGAGAAGCTGGTACAGGTCGCCCAGCGTGAAGACACCCACGGCTACTCCACGTCGCGCGGCATCCCGCGCCTGAGCAGGGCCCTCTCCCACTAGTACAAg                                                                                                              <  2:1241381/150‑1 (MQ=255)

                                    tcGACCTGAGCATGGGCAACCCCGATGGCGCCACCCCGCCGCACATCGTCGAGAAGCTGGTACAGGTCGCCCAGCGTGAAGACACCCACGGCTACTCCACGTCGCGCGGCATCCCGCGCCTGCGCCGGGCCATCTCCAACTGGTACAAgg                                                                                                             >  2:347579/1‑150 (MQ=255)

                                    tcGACCTGAGCATGGGCAACCCCGATGGCGCCACCCCGCCGCACATCGTCGAGAAGCTGGTACAGGTCGCCCAGCGTGAAGACACCCACGGCTACTCCACGTCGCGCGGCATCCCGCGCCTGCGCCGGGCCATCTCCAACTGGTACAAgg                                                                                                             >  1:1205202/1‑150 (MQ=255)

                                      gACCTGAGCATGGGCAACCCCGATGGCGCCACCCCGCCGCACATCGTCGAGAAGCTGGTACAGGTCGCCCAGCGTGAAGACACCCACGGCTACTCCACGTCGCGCGGCATCCCGCGCCTGCGCCGGGCCATCTCCAACTGGTACAAGGAc                                                                                                           <  1:2381732/150‑1 (MQ=255)

                                         cTGAGCATGGGCAACCCCGATGGCGCCACCCCGCCGCACATCGTCGAGAAGCTGGTACAGGTCGCCCAGCGTGAAGACACCCACGGCTACTCCACGTCGCGCGGCATCCCGCGCCTGCGCCGGGCCATCTCCAACTGGTACAAGGa                                                                                                            <  1:1504525/146‑1 (MQ=255)

                                               aTGGGCAACCCCGATGGCGCCACCCCGCCGCACATCGTCGAGAAGCTGGTACAGGTCGCCCAGCGTGAAGACACCCACGGCTACTCCACGTCGCGCGGCATCCCGCGCCTGCGCCGGGCCATCTCCAACTGGTACAAGGACCGCTACGAg                                                                                                  >  2:2307436/1‑150 (MQ=255)

                                                     aaCCCCGATGGCGCCACCCCGCCGCACATCGTCGAGAAGCTGGTACAGGTCGCCCAGCGTGAAGACACCCACGGCTACTCCACGTCGCGCGGCATCCCGCGCCTGCGCCGGGCCATCTCGAACTGGTACAAGGACCGCTACGAGGTCGAc                                                                                            >  1:1463128/1‑150 (MQ=255)

                                                     aaCCCCGATGGCGCCACCCCGCCGCACATCGTCGAGAAGCTGGTACAGGTCGCCCAGCGTGAAGACACCCACGGCTACTCCACGTCGCGCGGCATCCCGCGCCTGCGCCGGGCCATCTCCAACTGGTACAAGGACCGCTACGAGGTCGAc                                                                                            >  1:3719/1‑150 (MQ=255)

                                                     aaCCCCGATGGCGCCACCCCGCCGCACATCGTCGAGAAGCTGGTACAGGTCGCCCAGCGTGAAGACACCCACGGCTACTCCACGTCGCGCGGCATCCCGCGCCTGCGCCGGGCCATCTCCAACTGGTACAAGGACCGCTACGAGGTCGAc                                                                                            >  1:2874/1‑150 (MQ=255)

                                                       ccccGATGGCGCCACCCCGCCGCACATCGTCGAGAAGCTGGTACAGGTCGCCCAGCGTGAAGACACCCACGGCTACTCCACGTCGCGCGGCATCCCGCGCCTGCGCCGGGCCATCTCCAACTGGTACAAGGACCGCTACGAGGTCGACAt                                                                                          >  2:134848/1‑150 (MQ=255)

                                                       ccccGATGGCGCCACCCCGCCGCACATCGTCGAGAAGCTGGTACAGGTCGCCCAGCGTGAAGACACCCACGGCTACTCCACGTCGCGCGGCATCCCGCGCCTGCGCCGGGCCATCTCCAACTGGTACAAGGACCGCTACGAGGTCGACAt                                                                                          >  2:1475324/1‑150 (MQ=255)

                                                         ccGATGGCGCCACCCCGCCGCACATCGTCGAGAAGCTGGTACAGGTCGCCCAGCGTGAAGACACCCACGGCTACTCCACGTCGCGCGGCATCCCGCGCCTGCGCCGGGCCATCTCCAACTGGTACAAGGACCGCTACGAGGTCGACATCg                                                                                        >  2:1223851/1‑150 (MQ=255)

                                                         ccGATGGCGCCACCCCGCCGCACATCGTCGAGAAGCTGGTACAGGTCGCCCAGCGTGAAGACACCCACGGCTACTCCACGTCGCGCGGCATCCCGCGCCTGCGCCGGGCCATCTCCAACTGGTACAAGGACCGCTACGAGGTCGACATCg                                                                                        >  2:952889/1‑150 (MQ=255)

                                                           gATGGCGCCACCCCGCCGCACATCGTCGAGAAGCTGGTACAGGTCGCCCAGCGTGAAGACACCCACGGCTACTCCACGTCGCGCGGCATCCCGCGCCTGCGCCGGGCCATCTCCAACTGGTACAAGGACCGCTACGAGGTCGACATCGAc                                                                                      <  1:2368745/150‑1 (MQ=255)

                                                             tGGCGCCACCCCGCCGCACATCGTCGAGAAGCTGGTACAGGTCGCCCAGCGTGAAGACACCCACGGCTACTCCACGTCGCGCGGCATCCCGCGCCTGCGCCGGGCCATCTCCAACTGGTACAAGGACCGCTACGAGGTCGACATCGAccc                                                                                    <  1:1475324/150‑1 (MQ=255)

                                                             tGGCGCCACCCCGCCGCACATCGTCGAGAAGCTGGTACAGGTCGCCCAGCGTGAAGACACCCACGGCTACTCCACGTCGCGCGGCATCCCGCGCCTGCGCCGGGCCATCTCCAACTGGTACAAGGACCGCTACGAGGTCGACATCGAccc                                                                                    <  1:2126882/150‑1 (MQ=255)

                                                                  ccACCCCGCCGCACATCGTCGAGAAGCTGGTACAGGTCGCCCAGCGTGAAGACACCCACGGCTACTCCACGTCGCGCGGCATCCCGCGCCTGCGCCGGGCCATCTCCAACTGGTACAAGGACCGCTACGAGGTCGACATCGACCCGGaaa                                                                               >  2:548410/1‑150 (MQ=255)

                                                                    aCCCCGCCGCACATCGTCGAGAAGCTGGTACAGGTCGCCCAGCGTGAAGACACCCACGGCTACTCCACGTCGCGCGGCATCCCGCGCCTGCGCCGGGCCATCTCCAACTGGTACAAGGACCGCTACGAGGTCGACATCGACCCGGAAAGc                                                                             >  2:1452040/1‑150 (MQ=255)

                                                                       ccgccgCACATCGTCGAGAAGCTGGTACAGGTCGCCCAGCGTGAAGACACCCACGGCTACTCCACGTCGCGCGGCATCCCGCGCCTGCGCCGGGCCATCTCCAACTGGTACAAGGACCGCTACGAGGTCGACATCGACCCGGAAAGCGaa                                                                          >  2:1310270/1‑150 (MQ=255)

                                                                       ccgccgCACATCGTCGAGAAGCTGGTACAGGTCGCCCAGCGTGAAGACACCCACGGCTACTCCACGTCGCGCGGCATCCCGCGCCTGCGCCGGGCCATCTCCAACTGGTACAAGGACCGCTACGAGGTCGACATCGACCCGGAAAGCGaa                                                                          <  2:1266660/150‑1 (MQ=255)

                                                                       ccgccgCACATCGTCGAGAAGCTGGTACAGGTCGCCCAGCGTGAAGACACCCACGGCTACTCCACGTCGCGCGGCATCCCGCGCCTGCGCCGGGCCATCTCCAACTGGTACAAGGACCGCTACGAGGTCGACATCGACCCGGAAAGCGaa                                                                          <  1:1452040/150‑1 (MQ=255)

                                                                        cgccgcACATCGTCGAGAAGCTGGTACAGGTCGCCCAGCGTGAAGACACCCACGGCTACTCCACGTCGCGCGGCATCCCGCGCCTGCGCCGGGCCATCTCCAACTGGTACAAGGACCGCTACGAGGTCGACATCGACCCg                                                                                   >  1:254027/1‑140 (MQ=255)

                                                                        cgccgcACATCGTCGAGAAGCTGGTACAGGTCGCCCAGCGTGAAGACACCCACGGCTACTCCACGTCGCGCGGCATCCCGCGCCTGCGCCGGGCCATCTCCAACTGGTACAAGGACCGCTACGAGGTCGACATCGACCCg                                                                                   <  2:254027/140‑1 (MQ=255)

                                                                        cgccgcACATCGTCGAGAAGCTGGTACAGGTCGCCCAGCGTGAAGACACCCACGGCTACTCCACGTCGCGCGGCATCCCGCGCCTGCGCCGGGCCATCTCCAACTGGTACAAGGACCGCTACGAGGTCGACATCGACCCGGAAAGCGAAg                                                                         >  1:117980/1‑150 (MQ=255)

                                                                            gcACATCGTCGAGAAGCTGGTACAGGTCGCCCAGCGTGAAGACACCCACGGCTACTCCACGTCGCGCGGCATCCCGCGCCTGCGCCGGGCCATCTCCAACTGGTACAAGGACCGCTACGAGGTCGACATCGACCCGGAAAGCGAAGCCAt                                                                     <  2:2874/150‑1 (MQ=255)

                                                                               caTCGTCGAGAAGCTGGTACAGGTCGCCCAGCGTGAAGACACCCACGGCTACTCCACGTCGCGCGGCATCCCGCGCCTGCGCCGGGCCATCTCAAACTAGTACAAGTGCCGCGACGAGGTCAACATCGACCCGGAAAGCGAAGCCATCGt                                                                  >  2:1600672/1‑150 (MQ=255)

                                                                                 tcgtcgAGAAGCTGGTACAGGTCGCCCAGCGTGAAGACACCCACGGCTACTCCACGTCGCGCGGCATCCCGCGCCTGCGCCGGGCCATCTCCAACTGGTACAAGGACCGCTACGAGGTCGACATCGACCCGGAAAGCGAAGCCATCGTCa                                                                >  2:2279490/1‑150 (MQ=255)

                                                                                 tcgtcgAGAAGCTGGTACAGGTCGCCCAGCGTGAAGACACCCACGGCTACTCCACGTCGCGCGGCATCAAGCAAGTGTCGTGTTCCATCTCCAACTGGTACAAGGACCGCTACGAGGTCGACATCGACCCGGAAAGCGAAGCCATCGTCa                                                                >  2:83376/1‑150 (MQ=255)

                                                                                 tcctcgACAAGCTGGTACAGGTCGCCCAGCGTGAAGACACCCACGCCTACTCCACGTCGCCCGGCATCCCGCGCCTGCGCCGGGCCATCTCCAACTGTTACAAGGTCCGTTACGAGGACCACATCGACCCGGAAAGCGAAGCCATCGTCa                                                                <  1:923973/147‑1 (MQ=255)

                                                                                  cgtcgAGAAGCTGGTACAGGTCGCCCAGCGTGAAGACACCCACGGCTACTCCACGTCGCGCGGCATCCCGCGCCTGCGCCGGGCCATCTCCAACTGGTACAAGGACCGCTACGAGGTCGACATCGACCCGGAAAGCGAAGCCATCGTCAc                                                               <  2:1775536/150‑1 (MQ=255)

                                                                                  cgtcgAGAAGCTGGTACAGGTCGCCCAGCGTGAAGACACCCACGGCTACTCCACGTCGCGCGGCATCCCGCGCCTGCGCCGGGCCATCTCCAACTGGTACAAGGACCGCTACGAGGTCGACATCGACCCGGAAAGCGAAGCCATCGTCAc                                                               <  1:2108718/150‑1 (MQ=255)

                                                                                    tcgAGAAGCTGGTACAGGTCGCCCAGCGTGAAGACACCCACGGCTACTCCACGTCGCGCGGCATCCCGCGCCTGCGCCGGGCCATCTCCAACTGGTACAAGGACCGCTACGAGGTCGACATCGACCCGGAAAGCGAAGCCATCGTCACCa                                                             >  2:351085/1‑150 (MQ=255)

                                                                                        gcaccttgTACAGGTCGCCCAGCGTGAAGACACCCACGGCTACTCCACGTCGCGCGGCATCCCGCGCCTGCGCCGGGCCATCTCCAACTGGTACAAGGACCGCTACGAGGTCGACATCGACCCGGAAAGCGAAGCCATCGTCACCATCgg                                                         >  2:1901487/8‑150 (MQ=255)

                                                                                        gaAGCTGGTACAGGTCGCCCAGCGTGAAGACACCCACGGCTACTCCACGTCGCGCGGCATCCCGCGCCTGCGCCGGGCCATCTCCAACTGGTACAAGGACCGCTACGAGGTCGACATCGACCCGGAAAGCGAAGCCATCGTCACCATCgg                                                         <  2:31440/150‑1 (MQ=255)

                                                                                           gCTGGTACAGGTCGCCCAGCGTGAAGACACCCACGGCTACTCCACGTCGCGCGGCATCCCGCGCCTGCGCCGGGCCATCTCCAACTGGTACAAGGACCGCTACGAGGTCGACATCGACCCGGAAAGCGAAGCCATCGTCACCATCGGCTc                                                      >  2:1171023/1‑150 (MQ=255)

                                                                                            cTGGTACAGGTCGCCCAGCGTGAAGACACCCACGGCTACTCCACGTCGCGCGGCATCCCGCGCCTGCGCCGGGCCATCTCCAACTGGTACAAGGACCGCTACGAGGTCGACATCGAc                                                                                      <  2:1137281/117‑1 (MQ=255)

                                                                                            cTGGTACAGGTCGCCCAGCGTGAAGACACCCACGGCTACTCCACGTCGCGCGGCATCCCGCGCCTGCGCCGGGCCATCTCCAACTGGTACAAGGACCGCTACGAGGTCGACATCGAc                                                                                      >  1:1137281/1‑117 (MQ=255)

                                                                                               gTACAGGTCGCCCAGCGTGAAGACACCCACGGCTACTCCACGTCGCGCGGCATCCCGCGCCTGCGCCGGGCCATCTCCAACTGGTACAAGGAc                                                                                                           >  2:1537587/1‑93 (MQ=255)

                                                                                               gTACAGGTCGCCCAGCGTGAAGACACCCACGGCTACTCCACGTCGCGCGGCATCCCGCGCCTGCGCCGGGCCATCTCCAACTGGTACAAGGAc                                                                                                           <  1:1537587/93‑1 (MQ=255)

                                                                                                   aGGTCGCCCAGCGTGAAGACACCCACGGCTACTCCACGTCGCGCGGCATCCCGCGCCTGCGCCGGGCCATCTCCAACTGGTACAAGGACCGCTACGAGGTCGACATCGACCCGGAAAGCGAAGCCATCGTCACCATCGGCTCGAAAGAgg                                              <  1:1223851/150‑1 (MQ=255)

                                                                                                    ggTCGCCCAGCGTGAAGACACCCACGGCTACTCCACGTCGCGCGGCATCCCGCGCCTGCGCCGGGCCATCTCCAACTGGTACAAGGACCGCTACGAGGTCGACATCGACCCGGAAAGCGAAGCCATCGTCACCATCGGCTCGAAAGAggg                                             >  1:1607751/1‑150 (MQ=255)

                                                                                                    ggTCGCCCAGCGTGAAGACACCCACGGCTACTCCACGTCGCGCGGCATCCCGCGCCTGCGCCGGGCCATCTCCAACTGGTACAAGGACCGCTACGAGGTCGACATCGACCCGGAAAGCGAAGCCATCGTCACCATCGGCTCGAAAGAggg                                             <  1:952889/150‑1 (MQ=255)

                                                                                                     gTCGCCCAGCGTGAAGACACCCACGGCTACTCCACGTCGCGCGGCATCCCGCGCCTGCGCCGGGCCATCTCCAACTGGTACAAGGACCGCTACGAGGTCGACATCGACCCGGAAAGCGAAGCCATCGTCACCATCGGTTCGAAAGAGGGc                                            <  1:878554/150‑1 (MQ=255)

                                                                                                     gTCGCCCAGCGTGAAGACACCCACGGCTACTCCACGTCGCGCGGCATCCCGCGCCTGCGCCGGGCCATCTCCAACTGGTACAAGGACCGCTACGAGGTCGACATCGACCCGGAAAGCGAAGCCATCGTCACCATCGGCTCGAAAGAGGGc                                            <  2:1607751/150‑1 (MQ=255)

                                                                                                     gTCGCCCAGCGTGAAGACACCCACGGCTACTCCACGTCGCGCGGCATCCCGCGCCTGCGCCGGGCCATCTCCAACTGGTACAAGGACCGCTACGAGGTCGACATCGACCCGGAAAGCGAAGCCATCGTCACCATCGGCTCGAAAGAGGGc                                            <  1:1310270/150‑1 (MQ=255)

                                                                                                        gCCCAGCGTGAAGACACCCACGGCTACTCCACGTCGCGCGGCATCCCGCGCCTGCGCCGGGCCATCTCCAACTGGTACAAGGACCGCTACGAGGTCGACATCGACCCGGAAAGCTAAGCCATCGTCACCATCGGCTCGAAAGAGGGCCTg                                         <  2:1325232/150‑1 (MQ=255)

                                                                                                        gCCCAGCGTGAAGACACCCACGGCTACTCCACGTCGCGCGGCATCCCGCGCCTGCGCCGGGCCATCTCCAACTGGTACAAGGACCGCTACGAGGTCGACATCGACCCGGAAAGCGAAGCCATCGTCACCATCGGCTCGAAagag                                               >  2:1005655/1‑144 (MQ=255)

                                                                                                        gCCCAGCGTGAAGACACCCACGGCTACTCCACGTCGCGCGGCATCCCGCGCCTGCGCCGGGCCATCTCCAACTGGTACAAGGACCGCTACGAGGTCGACATCGACCCGGAAAGCGAAGCCATCGTCACCATCGGCTCGAAagag                                               <  1:1005655/144‑1 (MQ=255)

                                                                                                         cccAGCGTGAAGACACCCACGGCTACTCCACGTCGCGCGGCATCCCGCGCCTGCGCCGGGCCATCTCCAACTGGTACAAGGACCGCTACGAGGTCGACATCGACCCGGaaa                                                                               <  1:1091638/111‑1 (MQ=255)

                                                                                                         cccAGCGTGAAGACACCCACGGCTACTCCACGTCGCGCGGCATCCCGCGCCTGCGCCGGGCCATCTCCAACTGGTACAAGGACCGCTACGAGGTCGACATCGACCCGGaaa                                                                               >  2:1091638/1‑111 (MQ=255)

                                                                                                          ccAGCGTGAAGACACCCACGGCTACTCCACGTCGCGCGGCATCCCGCGCCTGCGCCGGGCCATCTCCAACTGGTACAAGGACCGCTACGAGGTCGACATCGACCCGGAAAGCGAAGCCATCGTCACCATCGGCTCGAAAGAGGGCCTGGc                                       >  1:2354621/1‑150 (MQ=255)

                                                                                                          ccAGCGTGAAGACACCCACGGCTACTCCACGTCGCGCGGCATCCCGCGCCTGCGCCGGGCCATCTCCAACTGGTACAAGGACCGCTACGAGGTCGACATCGACCCGGAAAGCGAAGCCATCGTCACCATCGGCTCGAAAGAGGGCCTGGc                                       >  1:993079/1‑150 (MQ=255)

                                                                                                          ccAGCGTGAAGACACCCACGGCTACTCCACGTCGCGCGGCATCCCGCGCCTGCGCCGGGCCATCTCCAACTGGTACAAGGACCGCTACGAGGTCGACATCGACCCGGAAAGCGAAGCCATCGTCACCATCGGCTCGAAAGAGGGCCTGGc                                       >  2:2167443/1‑150 (MQ=255)

                                                                                                          ccAGCGTGAAGACACCCACGGCTACTCCACGTCGCGCGGCATCCCGCGCCTGCGCCGGGCCATCTCCAACTGGTACAAGGACCGCTACGAGGTCGACATCGACCCGGAAAGCGAAGCCATCGTCACCATCGGCTCGAAAGAGGGCCTGGc                                       <  1:1980181/150‑1 (MQ=255)

                                                                                                          ccAGCGTGAAGACACCCACGGCTACTCCACGTCGCGCGGCATCCCGCGCCTGCGCCGGGCCATCTCCAACTGGTACAAGGACCGCTACGAGGTCGACATCGACCCGGAAAGCGAAGCCATCGTCACCATCGGCTCGAAAGAGGGCCTGGc                                       >  2:1980181/1‑150 (MQ=255)

                                                                                                          ccAGCGTGAAGACACCCACGGCTACTCCACGTCGCGCGGCATCCCGCGCCTGCGCCGGGCCATCTCCAACTGGTACAAGGACCGCTACGAGGTCGACATCGACCCGGAAAGCGAAGCCATCGTCACCATCGGCTCGAAAGAGGGCCTGGc                                       >  2:2063180/1‑150 (MQ=255)

                                                                                                                tGAAGACACCCACGGCTACTCCACGTCGCGCGGCATCCCGCGCCTGCGCCGGGCCATCTCCAACTGGTACAAGGACCGCTACGAGGTCGACATCGACCCGGAAAGCGAAGCCATCGTCACCATCGGCTCGAAAGAGGGCCTGGCCCACCt                                 >  1:1340310/1‑150 (MQ=255)

                                                                                                                  aaGACACCCACGGCTACTCCACGTCGCGCGGCATCCCGCGCCTGCGCCGGGCCATCTCCAACTGGTACAAGGACCGCTACGAGGTCGACATCGACCCGGAAAGCGAAGCCATCGTCACCATCGGCTCGAAAGAGGGCCTGGCCCACCTGa                               <  1:1477512/150‑1 (MQ=255)

                                                                                                                       acCCACGGCTACTCCACGTCGCGCGGCATCCCGCGCCTGCGCCGGGCCATCTCCAACTGGTACAAGGACCGCTACGAGGTCGACATCGACCCGGAAAGCGAAGCCATCGTCACCATCGGCTCGAAAGAGGGCCTGGCCCACCTGATGCTg                          <  1:1225126/150‑1 (MQ=255)

                                                                                                                       acCCACGGCTACTCCACGTCGCGCGGCATCCCGCGCCTGCGCCGGGCCATCTCCAACTGGTACAAGGACCGCTACGAGGTCGACATCGACCCGGAAAGCGAAGCCATCGTCACCATCGGCTCGAAAGAGGGCCTGGCCCACCTGATGCTg                          >  2:245671/1‑150 (MQ=255)

                                                                                                                         ccACGGCTACTCCACGTCGCGCGGCATCCCGCGCCTGCGCCGGGCCATCTCCAACTGGTACAAGGACCg                                                                                                         >  2:1856615/1‑69 (MQ=255)

                                                                                                                         ccACGGCTACTCCACGTCGCGCGGCATCCCGCGCCTGCGCCGGGCCATCTCCAACTGGTACAAGGACCg                                                                                                         <  1:1856615/69‑1 (MQ=255)

                                                                                                                         ccACGGCTACTCCACGTCGCGCGGCATCCCGCGCCTGCGCCGGGCCATCTCCAACTGGTACAAGGACCGCTACGAGGTc                                                                                               <  2:973879/79‑1 (MQ=255)

                                                                                                                         ccACGGCTACTCCACGTCGCGCGGCATCCCGCGCCTGCGCCGGGCCATCTCCAACTGGTACAAGGACCGCTACGAGGTc                                                                                               >  1:973879/1‑79 (MQ=255)

                                                                                                                         ccACGGCTACTCCACGTCGCGCGGCATCCCGCGCCTGCGCCGGGCCATCTCCAACTGGTACAAGGACCGCTACGAGGTCGACATCGACCCGGAAAGCGAAGCCATCGTCACCATCGGCTCGAAAGAGGGCCTGGCCCACCTGATGCTGGc                        <  1:1795997/150‑1 (MQ=255)

                                                                                                                               cTACTCCACGTCGCGCGGCATCCCGCGCCTGCGCCGGGCCATCTCCAACTGGTACAAGGACCGCTACGAGGTCGACATCGACCCGGAAAGCGAAGCCATCGTCACCATCGGCTCGAAAGAGGGCCTGGCCCACCTGATGCTGGCCACCCt                  >  1:327255/1‑150 (MQ=255)

                                                                                                                                  ccccACGTCGCGTGGCATCCCGCGCCTGCGCCGGGCCATCTCCAACTGGTACAAGGACCGCTACGAGGTCGACATCGACCCGGAAAGCGAAGCCATCGTCACCATCGGCTCGAAAGAGGGCCTGGCCCACCTGATGCTGGCCACCCTCGa               <  2:1463128/148‑1 (MQ=255)

                                                                                                                                     cACGTCGCGCGGCATCCCGCGCCTGCGCCGGGCCATCTCCAACTGGTACAAGGACCGCTACGAGGTCGACATCGACCCGGAAAGCGAAGCCATCGTCACCATCGGCTCGAAAGAGGGCCTGGCCCACCTGATGCTGGCCACCCTCGAc              >  2:938657/1‑148 (MQ=255)

                                                                                                                                     cACGTCGCGCGGCATCCCGCGCCTGCGCCGGGCCATCTCCAACTGGTACAAGGACCGCTACGAGGTCGACATCGACCCGGAAAGCGAAGCCATCGTCACCATCGGCTCGAAAGAGGGCCTGGCCCACCTGATGCTGGCCACCCTCGAc              <  1:938657/148‑1 (MQ=255)

                                                                                                                                     cACGTCGCGCGGCATCCCGCGCCTGCGCCGGGCCATCTCCAACTGGTACAAGGACCGCTACGAGGTCGACATCGACCCGGAAAGCGAAGCCATCGTCACCATCGGCTCGAAAGAGGGCCTGGCCCACCTGATGCTGGCCACCCTCGACCa            >  1:807298/1‑150 (MQ=255)

                                                                                                                                       cGTCGCGCGGCATCCCGCGCCTGCGCCGGGCCATCTCCAACTGGTACAAGGACCGCTACGCGGTGGAGATCTGCCCGGAAAGCGAAGCCATCGTCACCATCGGCTCGAAAGAGGGCCTGGCCCACCTGATGCTGGCCACCCTCGACCAgg          <  1:2221249/150‑1 (MQ=255)

                                                                                                                                        gtggcgcgcCACCCCGCTCCTGCGCCGGGCCATCTCCAACTGGTACAAGGACCGCTACGAGGTCGACATCGACCCGGAAAGCGAAGCCATCGTCACCATCGGCTCGAAAGAGGGCCTGGCCCACCTGATGCTGGCCACCCTCGACCAggg         <  2:1340310/147‑1 (MQ=255)

                                                                                                                                         tCGCGCGGCATCCCGCGCCTGCGCCGGGCCATCTCCAACTGGTACAAGGACCGCTACGAGGTCGACATCGACCCGGAAAGCGAAGCCATCGTCACCATCGGCTCGAAAGAGGGCCTGGCCCACCTGATGCTGGCCACCCTCGACCAGGGc        <  2:1364429/150‑1 (MQ=255)

                                                                                                                                         aggcgcgGGATGCCGCGCCTGCGCCGGGCCATCTCCAACTGGTACAAGGACCGCTACGAGGTCGACATCGACCCGGAAAGCGAAGCCATCGTCACCATCGGCTCGAAAGAGGGCCTgg                                        <  2:1799040/116‑1 (MQ=255)

                                                                                                                                         aggcgcgGGATGCCGCGCCTGCGCCGGGCCATCTCCAACTGGTACAAGGACCGCTACGAGGTCGACATCGACCCGGAAAGCGAAGCCATCGTCACCATCGGCTCGAAAGAGGGCCTgg                                        >  1:1799040/3‑118 (MQ=255)

                                                                                                                                          ggcgcgGGATGCCGCGCCTGCGCCGGGCCATCTCCAACTGGTACAAGGACCGCTACGAGGTCGACATCGACCCGGAAAGCGAAGCCAt                                                                     >  2:42822/2‑88 (MQ=255)

                                                                                                                                          ggcgcgGGATGCCGCGCCTGCGCCGGGCCATCTCCAACTGGTACAAGGACCGCTACGAGGTCGACATCGACCCGGAAAGCGAAGCCATCGTCACCATCGGCTCGAAAGAGGGCCTGGCCCACCTGATGCTg                          <  1:1922845/130‑1 (MQ=255)

                                                                                                                                          ggcgcgGGATGCCGCGCCTGCGCCGGGCCATCTCCAACTGGTACAAGGACCGCTACGAGGTCGACATCGACCCGGAAAGCGAAGCCATCGTCACCATCGGCTCGAAAGAGGGCCTGGCCCACCTGATGCTg                          >  2:1922845/2‑131 (MQ=255)

                                                                                                                                          ggcgccGGATGCCGCGCCTGCGCCGGGCCATCTCCAACTGGTACAAGGACCGCTACGAGGTCGACATCGACCCGGAAAGCGAAGCCAt                                                                     <  1:42822/87‑1 (MQ=255)

                                                                                                                                           gcgcgGCATCCCGCGCCTGCGCCGGGCCATCTCCAACTGGTACAAGGACCGCTACGAGGTCGACATCGACCCGGAAAGCGAAGCCATCGTCACCATCGGCTCGAAAGAGGGCCTGGCCCACCTGATGCTGGCCACCCTCGACCAGGGCGa      >  2:2193149/1‑150 (MQ=255)

                                                                                                                                             gcgGCATCCCGCGCCTGCGCCGGGCCATCTCCAACTGGTACAAGGACCGCTACGAGGTCGACATCGACCCGGAAAGCGAAGCCATCGTCACCATCGGCTCGAAAGAGGGc                                            >  1:789285/1‑110 (MQ=255)

                                                                                                                                             gcgGCATCCCGCGCCTGCGCCGGGCCATCTCCAACTGGTACAAGGACCGCTACGAGGTCGACATCGACCCGGAAAGCGAAGCCATCGTCACCATCGGCTCGAAAGAGGGc                                            <  2:789285/110‑1 (MQ=255)

                                                                                                                                             gcgGCATCCCGCGCCTGCGCCGGGCCATCTCCAACTGGTACAAGGACCGCTACGAGGTCGACATCGACCCGGAAAGCGAAGCCAGCGTCACCATCGGCTCGAAAGAGGGCCTGGCCCACCTGATGCTGGCCACCCTCGACCAGGGCGATa    >  1:1356193/1‑150 (MQ=255)

                                                                                                                                               ggCATCCCGCGCCTGCGCCGGGCCATCTCCAACTGGTACAAGGACCGCTACGAGGTCGACATCGACCCGGAAAGCGAAGCCATCGTCACCATCGGCTCGAAAGAGGGCCTGGCCCACCTGATGCTGGCCACCCTCGACCAGGGCGATACg  <  1:2063180/150‑1 (MQ=255)

TCAAGATGGCCGCCCGCCGCCGTGGCGAGGACATCATCGACCTGAGCATGGGCAACCCCGATGGCGCCACCCCGCCGCACATCGTCGAGAAGCTGGTACAGGTCGCCCAGCGTGAAGACACCCACGGCTACTCCACGTCGCGCGGCATCCCGCGCCTGCGCCGGGCCATCTCCAACTGGTACAAGGACCGCTACGAGGTCGACATCGACCCGGAAAGCGAAGCCATCGTCACCATCGGCTCGAAAGAGGGCCTGGCCCACCTGATGCTGGCCACCCTCGACCAGGGCGATACG  >  NC_002947/955441‑955733

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`