Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_002947	968,878	G→T	8.5%	intergenic (‑308/+23)	PP_0831 ← / ← PP_t68	hypothetical protein/tRNA‑Leu

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	968,878	0	G	T	8.5%	199.1 / 5.9	67	intergenic (‑308/+23)	PP_0831/PP_t68	hypothetical protein/tRNA‑Leu
Reads supporting (aligned to +/- strand):  ref base G (31/29);  new base T (2/4);  total (33/34)
Fisher's exact test for biased strand distribution p-value = 6.72e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.82e-01

TAACAATACTTTCGGAATATATCTGACGAATGACAGCTTAAGTGCTAGCGCAAGGGGCGGCCAATAGAATGCAGGTATGGGGGGAGGCGCGGGAGTCAGGGGGGCGGCGTCAACGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGG‑TTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCGAAAACGGATTTTGAATCCGCCGCGTCTACCAATTCCGCCATCAGGGCGTGGCGCGCAGTATAAAGAGGTGCCGCTGGTCGGTCAATC  >  NC_002947/968729‑969025                                                                                                                                                      |                                                                                                                                                     tAACAATACTTTCGGAATATATCTGACGAATGACAGCTTAAGTGCTAGCGCAAGGGGCGGCCAATAGAATGCAGGTATGGGGGGAGGCGCGGGAGTCAGGGGGGCGGCGTCAACGACGTGCGTGAATCGCAGGCACAAAAAAaccgaccg                                                                                                                                                      >  1:1168672/1‑150 (MQ=255)             ggaaaTATATCTGACGAATGAGAGCTTAAGTGCTAGCGCAAGGGGTGGCCAATAGAATGCAGGTATGGGGGGAGGCGCGCGAGTCAGGGGCGCGGCGTCAACGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGG‑ttt                                                                                                                                         <  2:130979/147‑1 (MQ=255)             cGGAATATATCTGACGAATGACAGCTTAAGTGCTAGCGCAAGGGGCGGCCAATAGAATGCAGGTATGGGGGGAGGCGCGGGAGTCAGGGGGGCGGCGTCAACGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGG‑ttt                                                                                                                                         >  2:1622847/1‑150 (MQ=255)             cGGAATATATCTGACGAATGACAGCTTAAGTGCTAGCGCAAGGGGCGGCCAATAGAATGCAGGTATGGGGGGAGGCGCGGGAGTCAGGGGGGCGGCGTCAACGACGTGCGTGAATCGAAGGCACAAAAAAACCGACCTTACGGTCGG‑ttt                                                                                                                                         <  1:1106359/150‑1 (MQ=255)              ggAATATATCTGACGAATGACAGCTTAAGTGCTAGCGCAAGGGGCGGCCAATAGAATGCAGGTATGGGGGGAGGCGCGGGAGTCAGGGGGGCGGCGTCAACGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGG‑tttt                                                                                                                                        >  1:2130095/1‑150 (MQ=255)                aaTATATCTGACTAATGACAGCTTAAGTGCTAGCGCAAGGGGCGGCAAATAGAATGCATGTATGGGGGGAGGCGCGGGAGTCAGGGGGGCGGCGTCAACGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCTTACGGTCGG‑tttttt                                                                                                                                      <  2:961020/150‑1 (MQ=255)                 atatatCTGACGAATGACAGCTTAAGTGCTAGCGCAAGGGGCGGCCAATAGAATGCAGGTATGGGGGGAGGCGCGGGAGTCAGGGGGGCGGCGTCAACGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGG‑TTTTTTc                                                                                                                                     >  2:14790/1‑150 (MQ=255)                  tatatCTGACAAATGACAGCTTAAGTGCTAGCGCAAGGGGCGGCAAATAAAATGCAGTTATGGGGGGAGGCGCGGGAGTCAGGGGGGCGGCGTCAACGACTGGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGG‑TTTTTTcc                                                                                                                                    <  2:2140997/150‑1 (MQ=255)                          aggAATGAAAGTTTAAGTGGTAGCGCACGGGGGGGGCAATAGAATGGAGGTATGGGGGGTGGCGGGGGAGTAAGGGGGGCGGCGTCAACGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGG‑TTTTTTCCGGATTTgg                                                                                                                            <  2:1168672/148‑1 (MQ=255)                          aCGAATGACAGCTTAAGTGCTAGCGCAAGGGGCGGCCAATAGAATGCAGGTATGGGGGGAGGCGCGGGAGTCAGGGGGGCGGCGTCAACGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGG‑TTTTTTCCGGAttt                                                                                                                              >  2:1482227/1‑148 (MQ=255)                          aCGAATGACAGCTTAAGTGCTAGCGCAAGGGGCGGCCAATAGAATGCAGGTATGGGGGGAGGCGCGGGAGTCAGGGGGGCGGCGTCAACGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGG‑TTTTTTCCGGAttt                                                                                                                              <  1:1482227/148‑1 (MQ=255)                            gAATGACAGCTTAAGTGCTAGCGCAAGGGGCGGCCAATAGAATGCAGGTATGGGGGGAGGCGCGGGAGTCAGGGGGGCGGCGTCAACGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGG‑TTTTTTCGGGATATGGTg                                                                                                                          >  2:976745/1‑150 (MQ=255)                            gAATGACAGCTTAAGTGCTAGCGCAAGGGGCGGCCAATAGAATGCAGGTATGGGGGGAGGCGCGGGAGTCAGGGGGGCGGCGTCAACGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGG‑TTTTTTCCGGATTTGGTg                                                                                                                          >  2:1576164/1‑150 (MQ=255)                               tGACAGCTTAAGTGCTAGCGCAAGGGGCGGCCAATAGAATGCAGGTATGGGGGGAGGCGCGGGAGTCAGGGGGGCGGCGTCAACGACGTGCGTGAATCCAAGGCACCAAAAGACCAACCGGAAGGGTGG‑TGTGGTGCGGATTTGGTGccc                                                                                                                       >  2:22565/1‑150 (MQ=255)                                   aGCTTAAGTGCTAGCGCAAGGGGCGGCCAATAGAATGCAGGTATGGGGGGAGGCGCGGGAGTCAGGGGGGCGGCGTCAACGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGG‑TTTTTTCCGGATTTGGTGCCCCGAg                                                                                                                   <  1:14790/150‑1 (MQ=255)                                   aGCTTAAGTGCTAGCGCAAGGGGCGGCCAATAGAATGCAGGTATGGGGGGAGGCGCGGGAGTCAGGGGGGCGGCGTCAACGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGG‑TTTTTTCCGGATTTGGTGCCCCGAg                                                                                                                   <  1:1576164/150‑1 (MQ=255)                                    gCTTAAGTGCTAGCGCAGGGGGCGGCAAATAGAATGCAGGTATGGGGGGAGGCGCGGGAGTCAGGGGGGCGGCGTCAACGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGG‑TTTTTTCCGGATTTGGTGCCCCGAgg                                                                                                                  <  2:1754992/150‑1 (MQ=255)                                     cTTAAGTGCTAGCGCAAGGGGCGGCCAATAGAATGAGGAAAAGGGGGGAGGCGCGGGAGTCAGGGGGGCGGCGTCAACGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGG‑TTTTTTCCGGATTTGGTGCCCCGAggg                                                                                                                 <  1:22565/150‑1 (MQ=255)                                      ttAAGTGCTAGCGCAAGGGGCGGCCAATAGAATGCAGGTATGGGGGGAGGCGCGGGAGTCAGGGGGGCGGCGTCAACGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGG‑TTTTTTCCGGATTTGGTGCCCCGAGGga                                                                                                                <  2:2130095/150‑1 (MQ=255)                                             cTAGCGCAAGGGGCGGCCAATAGAATGCAGGTATGGGGGGAGGCGCGGGAGTCAGGGGGGCGGCGTCAACGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGG‑TTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGa                                                                                                         >  1:952059/1‑150 (MQ=255)                                              tAGCGCAAGGGGCGGCCAATAGAATGCAGGTATGGGGGGAGGCGCGGGAGTCAGGGGGGCGGCGTCAACGACGTGCGTGAATCGCAGGCACAAAAAAACCGACGTTACGGTCGG‑tttttt                                                                                                                                      <  1:1532468/120‑1 (MQ=255)                                              tAGCGCAAGGGGCGGCCAATAGAATGCAGGTATGGGGGGAGGCGCGGGAGTCAGGGGGGCGGCGTCAACGACGTGCGTGAATCGCAGGCACAAAAAAACCGACGTTACGGTCGG‑tttttt                                                                                                                                      >  2:1532468/1‑120 (MQ=255)                                                gcgcAAGGGGCGGCCAATAGAATGCAGGTATGGGGGGAGGCGCGGGAGTCAGGGGGGCGGCGTCAACGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGG‑TTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACt                                                                                                      <  1:1312149/150‑1 (MQ=255)                                                       gggCGGCCAATAGAATGCAGGTATGGGGGGAGGCGCGGGAGTCAGGGGGGCGGCGTCAACGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGG‑TTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTc                                                                                               >  1:1029328/1‑150 (MQ=255)                                                           ggcTAATGGAACGCATGTGTGGAGGGCGGCGCGCGAGTCAGGGGCGCGGCGTCAACGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGG‑TTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCttt                                                                                           <  1:1121061/150‑1 (MQ=255)                                                            gcCAATAGAATGCAGGTATGGGGGGAGGCGCGGGAGTCAGGGGGGCGGCGTCAACGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGG‑TTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTc                                                                                          >  2:2251374/1‑150 (MQ=255)                                                              cAATAGAATGCAGGTATGGGGGGAGGCGCGGGAGTCAGGGGGGCGGCGTCAACGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGG‑TTTTTTCCg                                                                                                                                   >  2:1940006/1‑107 (MQ=255)                                                              cAATAGAATGCAGGTATGGGGGGAGGCGCGGGAGTCAGGGGGGCGGCGTCAACGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGG‑TTTTTTCCg                                                                                                                                   <  1:1940006/107‑1 (MQ=255)                                                                aTAGAATGCAGGTATGGGGGGAGGCGCGGGAGTCAGGGGGGCGGCGTCAACGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGG‑TTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCGaaa                                                                                      >  2:212798/1‑150 (MQ=255)                                                                  aGAATGCAGGTATGGGGGGAGGCGCGGGAGTCAGGGGGGCGGCGTCAACGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGG‑TTTTTTTCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCGaaatc                                                                                    <  2:944725/150‑3 (MQ=255)                                                                    aaTGCAGGTATGGGGGGAGGCGCGGGAGACAGGGGGGCGGCGTCAACGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGG‑TTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCGAAAACgg                                                                                  >  2:74123/1‑150 (MQ=255)                                                                      ggCAGGTAGGGGGGGAGGCGCGGGAGTCAGGGGGGCGGCGTCAACGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGG‑TTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCGAAAACGGAt                                                                                <  2:2340440/149‑1 (MQ=255)                                                                        cAGGTATGGGGGGAGGCGCGGGAGTCAGGGGGGCGGCGTCAACGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGG‑TTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCGAAAACGGAttt                                                                              >  1:1849642/1‑150 (MQ=255)                                                                         aGGTATGGGGGGAGGCGCGGGAGTCAGGGGGGCGGCGTCAACGACGTGCGTGAATCGCAGGCACGAAAAAACCGACCGTAAGGTCGG‑TTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCGAAAACGGAtttt                                                                             >  1:1750984/1‑150 (MQ=255)                                                                         aGGTATGGGGGGAGGCGCGGGAGTCAGGAGGGCGGCGTCAACGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGG‑TTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGCACTCCCACTCCTTTCGAAAACGGAtttt                                                                             >  2:309927/1‑150 (MQ=255)                                                                           gTATGGGGGGAGGCGCGGGAGTCAGGGGGGCGGCGTCAACGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGG‑TTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCGAAAAc                                                                                    <  1:1973800/141‑1 (MQ=255)                                                                           gTATGGGGGGAGGCGCGGGAGTCAGGGGGGCGGCGTCAACGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGG‑TTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCGAAAAc                                                                                    >  2:1973800/1‑141 (MQ=255)                                                                           gTATGGGGGGAGGCGCGGGAGTCAGGGGGGCGGCGTCAACGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGG‑TTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCGAAAACGGATTTTGa                                                                           >  1:1058283/1‑150 (MQ=255)                                                                           gTATGGGGGGAGGCGCGGGAGTCAGGGGGGCGGCGTCAACGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGG‑TTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCGAAAACGGATTTTGa                                                                           >  1:1337163/1‑150 (MQ=255)                                                                            tATGGGGGGAGGCGCGGGAGTCAGGGGGGCGGCGTCAACGACGTGCGTGAATCGCAGGCACGAAAAAACCGACCGTAAGGTCGG‑TTTTTTCCGGATTTGGTGCCCCCAGGGAGACTCGAACTCCCACTCCTTTCGAAAACGGATTTTGaa                                                                          <  2:1750984/150‑1 (MQ=255)                                                                                             gAGTCAGGGGGGCGGCGTCAACGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGG‑TTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCGAAAACGGATTTTGAATCCGCCGCGTCTACCaa                                                         >  1:1695016/1‑150 (MQ=255)                                                                                                  aGGGGGGCGGCGTCAACGACGTGCGTGAATCGCAGGGAAAACAACCCAGTGAGCTAGGTCGG‑TTTTTTCCGGGTGGGGTGCACCGAGGGAGAATCGAACTCCCACTCCTTTCGAAAACGGATTTTGAATCCGCCGCGTCTACCAATTCCg                                                    >  1:1252423/1‑150 (MQ=255)                                                                                                   ggggggCGGCGTCAACGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGG‑TTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCGAAAACGGATTTTGAATCCGCCGCGTCTACCAATTCCGc                                                   >  1:1333412/1‑150 (MQ=255)                                                                                                             gTCAACGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGG‑TTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCGAAAACGGATTTTGAATCCGCCGCGTCTACCAATTCCGCCATCAGGGCg                                         >  1:1884952/1‑150 (MQ=255)                                                                                                              ttaaCGACGTGCGTGAATCGCAGGCACAAAAAAGCCGACCTTAAGGTCGG‑TTTTTTCCGGATTTGGTGCCCCGAGGGTGTCTCGAATTCCCACTCCTTTCGAAAACGGATTTTGAATCCGCCGCGTCTACCAATTCCGCCATCAGGGCGt                                        <  1:976745/148‑1 (MQ=255)                                                                                                              tCAACGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGG‑TTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCGAAAACGGATTTTGAATCCGCCGCGTCTACCAATTCCGCCATCAGGGCGt                                        <  2:952059/150‑1 (MQ=255)                                                                                                                aaCGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGG‑TTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCGAAAACGGATTTTGaa                                                                          >  2:422516/1‑114 (MQ=255)                                                                                                                aaCGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGG‑TTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCGAAAACGGATTTTGaa                                                                          <  1:422516/114‑1 (MQ=255)                                                                                                                      gtgcgtgAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGG‑TTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCGAAAACGGATTTTGAATCCGCCGCGTCTACCAATTCCGCCATCAGGGCGTGGCGCGCa                                <  1:2251374/150‑1 (MQ=255)                                                                                                                         cgtgAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGG‑TTTTTTCCGGATTTGGTGCCCCGAGGGAGGCTCTAACTCCCACTCCTTTCGAAAACGGATTTTGAATCCGCCGCGTCTACCAATTCCGCCATCAGGGCGTGGCGCGCAGta                             >  1:1976098/1‑150 (MQ=255)                                                                                                                         cgtgAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGG‑TTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCGAAAACGGATTTTGaa                                                                          >  2:447372/1‑105 (MQ=255)                                                                                                                         cgtgAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGG‑TTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCGAAAACGGATTTTGaa                                                                          <  1:447372/105‑1 (MQ=255)                                                                                                                          gtgAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGG‑TTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCGAAAACGGATTTTGAATCCGCCGCGTCTACCAATTCCGCCATCAGGGCGTGGCGCGCAGtat                            >  1:1474377/1‑150 (MQ=255)                                                                                                                          gtgAATCGCAGGCACAAAAAAACCGACCATAAGGTCGG‑TTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCGAAAACGGATTTTGAATCCGCCGCGTCTACCAATTCCGCCATCAGGGCGTGGCGCGCAGtat                            <  1:538605/150‑1 (MQ=255)                                                                                                                            gAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGG‑TTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCGAAAACGGATTTTGAATCCGCCGCGTCTACCAATTCCGCCATCAGGGCGTGGCGCGCAGTATaa                          >  2:693141/1‑150 (MQ=255)                                                                                                                             aaTCGCAGGCACAAAAAAACCGACCGTAAGGTCGG‑TTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCGAAAACGGATTTTGCAACCGCCGCGTCTACCAATTCCGCCATCAGGGCGTGGCGCGCAGTATaaa                         <  1:54047/150‑1 (MQ=255)                                                                                                                             aaTCGCAGGCACAAAAAAACCGACCGTAAGGTCGG‑TTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCGAAAACGGATTTTGAATCCGCCGCGTCTACCAATTCCGCCATCAGGGCGTGGCGCGCAGTATaaa                         <  2:1029328/150‑1 (MQ=255)                                                                                                                             aaTCGCAGGCACAAAAAAACCGACCGTAAGGTCGG‑TTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCGAAAACGGATTTTGAATCCGCCGCGTCTACCAATTCCGCCATCAGGGCGTGGCGCGCAGTATaaa                         <  2:1474377/150‑1 (MQ=255)                                                                                                                              aTCGCAGGCACAAAAAAACCGACCGTAAGGTCGG‑TTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCGAAAACGGATTTTGAATCCGCCGCGTCTACCAATTCCGCCATCAGTGCGTGGCGCGCAGTATAAag                        <  1:74123/150‑1 (MQ=255)                                                                                                                                cGCAGGCACAAAAAAACCGACCGTAAGGTCGG‑TTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCGAAAACGGATTTTGAATCCGCCGCGTCTACCAATTCCGCCATCAGGGCGTGGCGCGCAGTATAAagag                      <  2:1337163/150‑1 (MQ=255)                                                                                                                                     gCACAAAAAAACCGACCGTAAGGTCGG‑TTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCGAAAACGGATTTTGAATCCGCCGCGTCTACCAATTCCGCCATCAGGGCGTGGCGCGCAGTATAAAGAGGTGc                  <  2:1820169/149‑1 (MQ=255)                                                                                                                                     gCACAAAAAAACCGACCGTAAGGTCGG‑TTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCGAAAACGGATTTTGAATCCGCCGCGTCTACCAATTCCGCCATCAGGGCGTGGCGCGCAGTATAAAGAGGTGc                  >  1:1820169/1‑149 (MQ=255)                                                                                                                                         aaaaaaaCCGACCGTAAGGTCGG‑TTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCGAAAACGGATTTTGAATCCGCCGCGTCTACCAATTCCGCCATCAGGGCGTGGCGCGCAGTATAAAGAGGTGCCGCTg             >  1:961024/1‑150 (MQ=255)                                                                                                                                         aaaaaaaCCGACCGTAAGGTCGG‑TTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCGAAAACGGATTTTGAATCCGCCGCGTCTACCAATTCCGCCATCAGGGCGGCGCGCGCGCTATAAAGAGGTGCCGCTg             >  2:1331252/1‑150 (MQ=255)                                                                                                                                           aaaaaCCGACCGTAAGGTCGG‑TTTTTTCCGGATTTGGTGCCCGGAGGGAGACTCGAACTCCCACTCCTTTCGAAAACGGATTTTGAATCCGCCGCGTCTACCAATTCCGCCATCAGGGCGTGGCGCGCAGTATAAAGAGGTGCCGCTggt           <  2:1338701/150‑1 (MQ=255)                                                                                                                                              aaCCGACCTTACGGTCGGTTTTTTTCCGGGTTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCGAAAACGGATTTTGAATCCGCCGCGTCTACCAATTCCGCCATCAGGGCGTGGCGCGCAGTATAAAGAGGTGCCGCTggtcg         >  1:678003/1‑150 (MQ=255)                                                                                                                                              aaCCGACCGTAAGGTCGG‑TTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCGAAAACGGATTTTGAATCCGCCGCGTCTACCAATTCCGCCATCAGGGCGTGGCGCGCAGTATAAAGAGGTGCCGCTggtcgg        <  2:1849642/150‑1 (MQ=255)                                                                                                                                              aaCCGACCGTAAGGTCGG‑TTTTTTCCGGATGTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCGAAAACGGATTTTGAATCCGCCGCGTCTACCAATTCCGCCATCAGGGCGTGGCGCGCAGTATAAAGAGGTGCCGCTggtcgg        <  1:693141/150‑1 (MQ=255)                                                                                                                                                    ccgTAAGGTCGG‑TTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCGAAAACGGATTTTGAATCCGCCGCGTCTACCAATTCCGCCATCAGGGCGTGGCGCGCAGTATAAAGAGGTGCCGCTGGTCGGTCAATc  <  2:1252423/150‑1 (MQ=255)                                                                                                                                                      |                                                                                                                                                     TAACAATACTTTCGGAATATATCTGACGAATGACAGCTTAAGTGCTAGCGCAAGGGGCGGCCAATAGAATGCAGGTATGGGGGGAGGCGCGGGAGTCAGGGGGGCGGCGTCAACGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGG‑TTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCGAAAACGGATTTTGAATCCGCCGCGTCTACCAATTCCGCCATCAGGGCGTGGCGCGCAGTATAAAGAGGTGCCGCTGGTCGGTCAATC  >  NC_002947/968729‑969025

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑