| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 996,354 | C→A | 7.7% | Q415H (CAG→CAT) ‡ | PP_0860 ← | sulfite reductase flavoprotein subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 996,354 | 0 | C | A | 7.7% | 286.4 / 9.6 | 92 | Q415H (CAG→CAT) ‡ | PP_0860 | sulfite reductase flavoprotein subunit |
| Reads supporting (aligned to +/- strand): ref base C (43/41); new base A (2/5); total (45/47) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.34e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.01e-01 | |||||||||||
CGAGTACCTTGCGCTCGAAGGCGCGAGCGCTGTCGGGCGCTTCGCCGTCGCCGAAGGTACTCACCACG‑AAGAGCGCGCGATGGGCCTGGCGCAGGTCGTTTTCACCCAGCTCGGCAAGGGCGCGCACCTGAACGGGCAGGCCAGCT‑GCCTGCAGCTGCTCGGCGCTCTGCCAG‑GCCAACTGTTCGGCAAAGCCACTCTGGCTGGCAAAGCCGATCAGCCAGCCGTCGCCATTACCGCTGTTGGCGACGTTGCCACGGGCTGCGCGCACTTGACGTTTCTTGCGGCGGCGGTCGAG > NC_002947/996206‑996500 | cGAGTACCTTGCGCTCGAAGGCGCGAGCGCTGTCGGGCGCTTCGCCGTCGCCGAAGGTACTCACCACG‑AAGAGCGCGCGATGGGCCTGGCGCAGGTCGTTTTCACCCAGCTCGGCAAGGGCGCGCACCTGAACGGGCAGGCCAGct‑gcct > 2:160804/1‑150 (MQ=255) tACCTTGCGCTCGAAGGCGCGAGCGCTGTCGGGCGCTTCGCCGTCGCCGAAGGTACTCACCACG‑AAGAGCGCGCGATGGGCCTGGCGCAGGTCGTTTTCACCCAGCTCGGCAAGGGCGCGCACCTGAACGGGCAGG‑CAGCtggcctgccc < 1:51112/150‑3 (MQ=255) tACCTTGCGCTCGAAGGCGCGAGCGCTGTCGGGCGCTTCGCCGTCGCCGAAGGTACTCACCACG‑AAGAGCGCGCGATCGACGCCACGCAGGTCGTTTTCACCCAGCTCGGCAAGGGCGCGCACCTGAACGGGCAGGCCAGCT‑GCCTGCAg > 1:150677/1‑150 (MQ=255) cTTGCGCTCGAAGGCGCGCGCGCTGTCGGCCGCTTCGCCTTCGGCGACGGAACTCACCGCGTCCGATCTCG‑GCGGTGCCTGGCGCAGGTCGTTTTCACCCAGCTCGGCAAGGGCGCGCACCTGAACGGGCAGGCCAGCT‑GCCTGCAgctg < 1:2223279/150‑1 (MQ=255) cTTGCGCTCGAAGGCGCGAGCGCTGTCGGGCGCTTCGCCGTCGCCGAAGGTACTCACCACG‑AAGAGCGCGCGATGGGCCTGGCGCAGGTCGTTTTCACCCAGCTCGGCAAGGGCGCGCACCTGAACGGGCAGGCCAGCT‑GCCTGCAgctg > 1:1292813/1‑150 (MQ=255) cTTGCGCTCGAAGGCGCGAGCCCTGTCGCGCGCTAAGACAGCCTTGGAGATGCTCACCACG‑AAGAGCGCGCCATATACCTTGCGCAGGTCGTTTTCACCCAGCTCGGCAAGGGCGCGCACCTGAACGGGCAGGCCAGCT‑GCCTGCAgctg < 1:2340737/150‑1 (MQ=255) ttGCGCTCGACGATGCGAGCGCTGTCGGGCGCTTCGCCGTCGCCGAAGGTACTCACCACG‑AAGAGCGCGCGATGGGCCTGGCGCAGGTCGTTTTCACCCAGCTCGGCAAGGGCGCGCACCTGAACGGGCAGGCCAGCT‑GCAGGCAgctgg < 1:1098690/150‑2 (MQ=255) ttGCGCTCGAAGGCGCGAGCGCTGTCGGGCGCTTCGCCGTCGCCGAAGGTACTCACCACG‑AAGAGCGCGCGATGGGCCTGGCGCAGGTCGTTTTCACCCAGCTCGGCAAGGGCGCGCACCTGAACGGGCAGGCCAGCT‑GCCTGCAgctgc > 1:1935088/1‑150 (MQ=255) ttGCGCTCGAAGGCGCGAGCGCTGTCGGGCGCTTCGCCGTCGCCGAAGGTACTCACCACG‑AAGAGCGCGCGATGGGCCTGGCGCAGGTCGTTTTCACCCAGCTCGGCAAGGGCGCGCACCTGAACGGGCAGGCCAGCT‑GCAGGCAgctgg < 2:2050275/150‑2 (MQ=255) tGCGCTCGAAGGCGCGAGCGCTGTCGGGCGCTTCGCCGTCGCCGAAGGTACTCACCACG‑AAGAGCGCGCGATGGGCCTGGCGCAGGTCGTTTTCACCCAGCTCGGCAAGGGCGCGCACCTGAACGGGCAGGCCAGCT‑GCAGGCAgctggc < 1:492252/150‑3 (MQ=255) gcgcTCGCAGGCGCGAGCGATATCGGACGATTTACCGTCGCCCAACGTACTCACCACG‑AAGAGCGCGCGATGGGCCTGGCGCAGGTCGTTTTCACCCAGCTCGGCAAGGGCGCGCACCTGAACGGGCAGGCCAGCT‑GCCTGCAGCTGCTc < 2:264815/150‑1 (MQ=255) gcgcTCGAAGGCGCGAGCGCTGTCGGGCGCTTCGCCGTCGCCGAAGGTACTCACCACG‑AAGAGCGCGCGATGGGCCTGGCGCAGGTCGTTTTCACACAGCTCGGCAAGGGCGCGCACCTGAACGGGCAGGCCAGCT‑GCAGGCAgctggcc < 1:1430865/150‑4 (MQ=255) gcTCGAAGGCGCGAGCGCTGTCGGGCGCTTCGCCGTCGCCGAAGGTACTCACCACG‑AAGAGCGCGCGATGGGCCTGGCGCAGGTCGTTTTCACCCAGCTCGGCAAGGGCGCGCACCTGAACGGGCAGGCCAGCT‑GCCTGCAGCTGCTCgg > 2:1744653/1‑150 (MQ=255) tCGAAGGCGCGAGCGCTGTCGGGCGCTTCGCCGTCGCCGAAGGTACTCACCACG‑AAGAGCGCGCGATGGGCCTGGCGCAGGTCGTTTTCACCCAGCTCGGCAAGGGCGCGCACCTGAACGGGCAGGCCAGCT‑GCCTGCAGCTGCTCGgcg > 1:130212/1‑150 (MQ=255) tCGAAGGCGCGAGCGCTGTCGGGCGCTTCGCCGTCGCCGAAGGTACTCACCACG‑AAGAGCGCGCGATGGGCCTGGCGCAGGTCGTTTTCACCCAGCTCGGCAAGGGCGCGCACCTGAACGGGCAGGCCAGCT‑GCCTGCAGCTGCTCGgcg > 2:1114824/1‑150 (MQ=255) tCGAAGGCGCGAGCGCTGTCGGGCGCTTCGCCGTCGCCGAAGGTACTCACCACG‑AAGAGCGCGCGATGGGCCTGGCGCAGGTCGTTTTCACCCAGCTCGGCAAGGGCGCGCACCTGAACGGGCAGGCCAGCT‑GCCTGCAGCTGCTCGgcg > 2:1236296/1‑150 (MQ=255) aaGGCGCGAGCGCTGTCGGGCGCTTCGCCGTCGCCGAAGGTACTCACCACG‑AAGAGCGCGCGATGGGCCTGGCGCAGGTCGTTTTCACCCAGCTCGGCAAGGGCGCGCACCTGAACGGGCAGGCCAGCT‑GCCTGCAGCTGCTCGGCGctc > 1:542926/1‑150 (MQ=255) gcgaGAGCGCTGTCGGGCGCTTCGCCGTCGGCGAAGGTACTCACCACG‑AAGAGCGAGCGATGGGAATGGCGTAGGTCGTTTTCACCCAGGTCGTCAAGGGCGCGCACTTGAACGTGCAGGCCAGCT‑GCCTGCAGCTGCTCGGCGCTCTGc < 2:881683/150‑1 (MQ=255) cgAGCGCTGTCGGGCGCTTCGCCGTCGCCGAAGGTACTCACCACG‑AAGAGCGCGCGATGGGCCTGGCGCAGGTCGTTTTCACCCAGCTCGGCAAGGGCGCGCACCTGAACGGGCAGGCCAGCT‑GCCTGCAGCTGCTCGGCGCTCTGCCAg < 1:163427/150‑1 (MQ=255) cgAGCGCTGTCGGGCGCTTCGCCGTCGCCGAAGGTACTCACCACG‑AAGAGCGCGCGATGGGCCTGGCGCAGGTCGTTTTCACCCAGCTCGGCAAGGGCGCGCACCTGAACGGGCAGGCCAGCT‑GCCTGCAGCTGCTCGGCGCTCTGCCAg < 1:1114824/150‑1 (MQ=255) cgAGCGCTATCAGGCGCTTCGCCGTCGCCGAAGGTACTCACCCCG‑AAGAGCGCGCGATGGGCCTGGCGCAGGTCGTTTTCACCCAGCTCGGCAAGGGCGCGCACCTGAACGGGCAGGCCAGCT‑GNCTGCAGCTGCTCGGCGCTCTGCCAg < 2:1000520/150‑1 (MQ=255) gcTGTCGGGCGCTTCGCCGTCGCCGAAGGTACTCACCACG‑AAGAGCGCGCGATGGGCCTGGCGCAGGTCGTTTTCACCCAGCTCGGCAAGGGCGCGCACCTGAACGGGCAGGCCAGCT‑GCCTGCAGCTGCTCGGCGCTCTGCCAG‑GCCaa > 2:1607872/1‑150 (MQ=255) gggCGCTTCGCCGTCGCCGAAGGTACTCACCACG‑AAGAGCGCGCGATGGGCCTGGCGCAGGTCGTTTTCACCCAGCTCGGCAAGGGCGCGCACCTGAACGGGCAGGCCAGCT‑GCCTGCAGCTGCTCGGCGCTCTGCCAG‑GCCAACTGTTc < 2:542926/150‑1 (MQ=255) gggCGCTTCGCCGTCGCCGAAGGTACTCACCACG‑AAGAGCGCGCGATGGGCCTGGCGCAGGTCGTTTTCACCCAGCTCGGCAAGGGCGCGCACCTGAACGGGCAGGCCAGCT‑GCAGGCAgctggcctg > 1:1647526/1‑123 (MQ=255) gggCGCTTCGCCGTCGCCGAAGGTACTCACCACG‑AAGAGCGCGCGATGGGCCTGGCGCAGGTCGTTTTCACCCAGCTCGGCAAGGGCGCGCACCTGAACGGGCAGGCCAGCT‑GCAGGCAgctggcctg < 2:1647526/128‑6 (MQ=255) ggCGCTTCGCCGTCGCCGAAGGTACTCACCACG‑AAGAGCGCGCGATGGGCCTGGCGCAGGTCGTTTTCACCCAGCTCGGCAAGGGCGCGCACCTGAACGGGCAGGCCAGCT‑GCCTGCAGCTGCTCGGCGCTCTGCCAG‑GCCAACTGTTCg < 2:2027877/150‑1 (MQ=255) ggCGCTTCGCCGTAGCAGAAGCTACTTACTACG‑AAGGGCGCGCCAGGGGTCTGGCCAAGGTCGTTTTCTCCCAGCTCGGAAAGGGCGCGCACCTGAACGGGCAGTCCATCT‑GCGTGCAGCTGCTCGGCGCTCTGCCAG‑GCCAACTGTTCg < 2:1159649/150‑1 (MQ=255) taccTTCGGCGACGGCGAAGGTACTCACCAGG‑AAGAGCGCGCGATGGGCCTGGCGCAGGTCGTTTTCACCCAGCTCGGCAAGGGCGCGCACCTGAACGGGCAGGCCAGCT‑GCCTGCAGCTGCTCGGCGCTCTGCCAG‑GCCAACTGTTCgg > 1:1045939/4‑150 (MQ=255) gcTTCGCCGTCGCCGAAGGTACTCACCACG‑AAGAGCGCGCGATTGGCCGGGCGCAGGTCGTTTTCACCCAGCTCGGCAAGGGCGCGCACCTGAACGGGCAGGCCAGCT‑GCCTGCAGCTGCTCGGCGCTCTGCCAG‑GCCAACTGTTCGGCa > 2:696197/1‑150 (MQ=255) gcTTCGCCGTCGCCGAAGGTACTCACCACG‑AAGAGCGCGCGATGGGCCTGGCGCAGGTCGTTTTCACCCAGCTCGGCAAGGGCGCGCACCTGAACGGGCAGGCCAGCT‑GCCTGCAGCTGCTCGGCGCTCTGCCAG‑GCCAACTGTTCGGcc > 2:1059464/1‑149 (MQ=255) ccTTCGGCGACGGCGAAGGTACTCACCACG‑AAGAGCGCGCGATGGGCCTGGCGCAGGTCGTTTTCACCCAGCTCGGCAAGGGCGCGCACCTGAACGGGCAGGCCAGCT‑GCCTGCAGCTGCTCGGCGCTCTGCCAG‑GCCAACTGTTCGGcc > 2:1219359/2‑149 (MQ=255) cTTCGCCGTCGCCGAAGGTACTCACCACG‑AAGAGCGCGCGATGGGCCTGGCGCAGGTCGTTTTCACCCAGCTCGGCAAGGGCGCGCACCTGAACGGGCAGGCCAGCT‑GCCTGCAGCTGCTCGGCGCTCTGCCAG‑GCCAACTGTTCGGCaa > 1:1138634/1‑150 (MQ=255) ttCGCCGTCGCCGAAGGTACTCACCACG‑AAGAGCGCGCGATGGGCCTGGCGCAGGTCGTTTTCACCCAGCTCGGCAAGGGCGCGCACCTGAACGGGCAGGCCAGCT‑GCCTGCAGCTGCTCGGCGCTCTGCCAG‑GCCAACTGTTCGGCaaa < 2:130212/150‑1 (MQ=255) tcgccgtcgccgAAGGTACTCACCACG‑AAGAGCGCGCGATGGGCCTGGCGCAGGTCGTTTTCACCCAGCTCGGCAAGGGCGCGCACCTGAACGGGCAGGCCAGCT‑GCCTGCAGCTGCTCGGCGCTCTGCCAG‑GCCAACTGTTCGGCAAAg < 2:1702286/150‑1 (MQ=255) cgtcgccgAAGGTACTCACCACG‑AAGAGCGCGCGATGGGCCTGGCGCAGGTCGTTTTCACCCAGCTCGGCAAGGGCGCGCACCTGAACGGGCAGGCCAGCT‑GCCTGCAGCTGCTCGGCGCTCTGCCAG‑GCCAACTGTTCGGCAAAGCCAc < 2:2066291/150‑1 (MQ=255) gtcgccgAAGGTACTCACCACG‑AAGAGCGCGCGATGGGCCTGGCGCAGGTCGTTTTCACCCAGCTCGGCAAGGGCGCGCACCTGAACGGGCAGGCCAGCT‑GCCTGCAGCTGCTCGGCGCTCTGCCAG‑GCCAACTGTTCGGCAAAGCCAct > 1:617321/1‑150 (MQ=255) aGGTACTCACCACG‑AAGAGCGCGCGATGGGCCTGGCGCAGGTCGTTTTCACCCAGCTCGGCAAGGGCGCGCACCTGAACGGGCAGGCCAGCT‑GCCTGCAGCTGCTCGGCGCTCTGCCAG‑GCCAACTGTTCGGCAAAGCCACTctggctgg < 2:617321/150‑1 (MQ=255) gTACTCACCACG‑AAGAGCGCGCGATGGGCCTGGCGCAGGTCGTTTTCACCCAGCTCGGCAAGGGCGCGCACCTGAACGGGCAGGCCAGCT‑GCCTGCAGCTGCTCGGCGCTCTGCCAG‑GCCAACTGTTCGGCaaa > 2:1796268/1‑134 (MQ=255) gTACTCACCACG‑AAGAGCGCGCGATGGGCCTGGCGCAGGTCGTTTTCACCCAGCTCGGCAAGGGCGCGCACCTGAACGGGCAGGCCAGCT‑GCCTGCAGCTGCTCGGCGCTCTGCCAG‑GCCAACTGTTCGGCaaa < 1:1796268/134‑1 (MQ=255) aCTCACCACG‑AAGAGCGCGCGATGGGCCTGGCGCAGGTCGTTTTCACCCAGCTCGGCAAGGGCGCGCACCTGAACGGGCAGGCCAGCT‑GCCTGCAGCTGCTCGGCGCTCTGCCAG‑GCCAACTGTTCGGCAAAGCCACTCTGGCTGGCaaa < 2:1393355/150‑1 (MQ=255) tCACCACG‑AAGAGCGCGCGATGGGCCTGGCGCAGGTCGTTTTCACCCAGCTCGGCAAGGGCGCGCACCTGAACGGGCAGGCCAGCT‑GCCTGCAGCTGCTCGGCGCTCTGCCAG‑GCCAACTGTTCGGCAAAGCCACTCTGGCTGGCAAAGc > 2:2034449/1‑150 (MQ=255) tCACCACG‑AAGAGCGCGCGATGGGCCTGGCGCAGGTCGTTTTCACCCAGCTCGGCAAGGGCGCGCACCTGAACGGGCAGGCCAGCT‑GCCTGCAGCTGCTCGGCGCTCTGCCAG‑GCCAACTGTTCGGCAAAGCCACTCTGGCTGGCAAAGc < 2:1138634/150‑1 (MQ=255) ccaccacG‑AAGAGCGCGCGATGGGCCTGGCGCAGGTCGTTTTCACCCAGCTCGGCAAGGGCGCGCACCTGAACGGGCAGGCCAGCT‑GCCTGCAGCTGCTCGGCGCTCTGCCAG‑GCCAACTGTTCGGCAAAGCCACTCTGGCTGGCAAAGc < 2:373462/149‑1 (MQ=255) ccacG‑AAGAGCGCGCGATGGGCCTGGCGCAGGTCGTTTTCACCCAGCTCGGCAAGGGCGCGCACCTGAACGGGCAGGCCAGCT‑GCCTGCAGCTGCTCGGCGCTCTGCCAG‑GCCAACTGTTCGGCAAAGCCACTCTGGCTGGCAAAGCCGa > 2:1979393/1‑150 (MQ=255) acG‑AAGAGCGCGCGATGGGCCTGGCGCAGGTCGTTTTCACCCAGCTCGGCAAGGGCGCGCACCTGAACGGGCAGGCCAGCT‑GCCTGCAGCTGCTCGGCGCTCTGCCAG‑GCCAACTGTTCg > 1:2255271/1‑120 (MQ=255) acG‑AAGAGCGCGCGATGGGCCTGGCGCAGGTCGTTTTCACCCAGCTCGGCAAGGGCGCGCACCTGAACGGGCAGGCCAGCT‑GCCTGCAGCTGCTCGGCGCTCTGCCAG‑GCCAACTGTTCg < 2:2255271/120‑1 (MQ=255) cG‑AAGAGCGCGCGATGGGCCTGGCGCAGGTCGTTTTCACCCAGCTCGGCAAGGGCGCGCACCTGAACGGGCAGGCCAGCT‑GCCTGCAGCTGCTCGGCGCTCTGCCAG‑GCCAACTGTTCGGCAAAGCCACTCTGGCTGGCAAAGccagagt < 2:2063353/150‑6 (MQ=255) g‑AAGAGCGCGCGATGGGCCTGGCGCAGGTCGTTTTCACCCAGCTCGGCAAGGGCGCGCACCTGAACGGGCAGGCCAGCT‑GCCTGCAGCTGCTCGGCGCTCTGCCAG‑GCCAACTGTTCGGCAAAGCCActc < 2:1088439/130‑1 (MQ=255) g‑AAGAGCGCGCGATGGGCCTGGCGCAGGTCGTTTTCACCCAGCTCGGCAAGGGCGCGCACCTGAACGGGCAGGCCAGCT‑GCCTGCAGCTGCTCGGCGCTCTGCCAG‑GCCAACTGTTCGGCAAAGCCActc > 1:1088439/1‑130 (MQ=255) g‑AAGAGCGCGCGATGGGCCTGGCGCAGGCCGTTTTCACCCAGCTCGGCAAGGGCGCGCACCTGAACGGGCAGGCCAGCT‑GCCTGCAGCTGCTCGGCGCTCTGCCAG‑GCCAACTGTTCGGCAAAGCCACTCTGGCTGGCAAAGCCGATcag > 1:2108399/1‑150 (MQ=255) gagCGCGCGATGGGCCTGGCGCAGGTCGTTTTCACCCAGCTCGGCAAGGGCGCGCACCTGAACGGGCAGGCCAGCT‑GCCTGCAGCTGCTCGGCGCTCTGCCAG‑GCCAACTGTTCGGCAAAGCCACTCTGGCTGGCAAAGCCGATcagcca < 1:2034449/150‑1 (MQ=255) gggCCTGGCGCAGGTCGTTTTCACCCAGCTCGGCAAGGGCGCGCACCTGAACGGGCAGGCCAGCT‑GCCTGCAGCTGCTCGGCGCTCTGCCAG‑GCCAACTGTTCGGCAAAGCCACTCTGGCTGGCAAAGCCGATCAGCCAGCCGTCGCCAt > 2:1838231/1‑150 (MQ=255) gCCTGGCGCAGGTCGTTTTCACCCAGCTCGGCAAGGGCGCGCACCTGAACGGGCAGGCCAGCT‑GCCTGCAGCTGCTCGGCGCTCTGCCAG‑GCCAACTGTTCGGCAAAGCCACTCTGGCTGGCAAAGCCGATCAGCCAGCCGTCGCCATTa < 1:1607872/150‑1 (MQ=255) ccTGGCGCAGGTCGTTTTCACCCAGCTCGGCAAGGGCGCGCACCTGAACGGGCAGGCCAGCT‑GCCTGCAGCTGCTCGGCGCTCTGCCAG‑GCCAACTGTTCGGCAAAGCCACTCtggctggc > 1:102603/1‑121 (MQ=255) ccTGGCGCAGGTCGTTTTCACCCAGCTCGGCAAGGGCGCGCACCTGAACGGGCAGGCCAGCT‑GCCTGCAGCTGCTCGGCGCTCTGCCAG‑GCCAACTGTTCGGCAAAGCCACTCtggctggc < 2:102603/121‑1 (MQ=255) cTGGCGCAGGTCGTTTTCACCCAGCTCGGCAAGGGCGCGCACCTGAACGGGCAGGCCAGCT‑GCCTGCAGCTGCTCGGCGCTCTGCCAG‑GCCAACTGTTCGGCAAAGCCAc < 1:763786/110‑1 (MQ=255) cTGGCGCAGGTCGTTTTCACCCAGCTCGGCAAGGGCGCGCACCTGAACGGGCAGGCCAGCT‑GCCTGCAGCTGCTCGGCGCTCTGCCAG‑GCCAACTGTTCGGCAAAGCCAc > 2:763786/1‑110 (MQ=255) gggggcAGGTCGTTTTCACCCAGCTCGGCATGGGCGGGGACCTGCACGGGCAGGCCAGCT‑GCCTGCAGCTGCTCGGCGCTCTTCCAG‑GCCAACTGTTCGGCAAAGCCACTCTGGCTGGCAAAGCCGATCAGCCAGCCGTCGCCATTACCg < 2:1739424/146‑1 (MQ=255) gcAGGTCGTTTTCACCCAGCTCGGCAAGGGCGCGCACCTGAACGGGCAGGCCAGCT‑GCCTGCAGCTGCTCGGCGCTCTGCCAG‑GCCAACTGTTCGGCAAAGCCACTCTGGCTGGCAAAGCCGATCAGCCAGCCGTCGCCATTACCGCTGt < 1:2218950/150‑1 (MQ=255) aGGTCGTTTTCACCCAGCTCGGCAAGGGCGCGCACCTGAACGGGCAGGCCAGCT‑GCCTGCAGCTGCTCGGCGCTCTGCCAG‑GCCAACTGTTCGGCAAAGCCACTCTGGCTGGCAAAGCCGATCAGCCAGCCGTCGCCATTACCGCTGTTg < 2:1045939/150‑1 (MQ=255) gTCGTTTTCACCCAGCTCGGCAAGGGCGCGCACCTGAACGGGCAGGCCAGCT‑GCCTGCAGCTGCTCGGCGCTCTGCCAG‑GCCAACTGTTCGGCAAAGCCACTCTGGCTGGCAAAGCCGATCAGCCAGCCGTCGCCATTa < 1:183162/139‑1 (MQ=255) gTCGTTTTCACCCAGCTCGGCAAGGGCGCGCACCTGAACGGGCAGGCCAGCT‑GCCTGCAGCTGCTCGGCGCTCTGCCAG‑GCCAACTGTTCGGCAAAGCCACTCTGGCTGGCAAAGCCGATCAGCCAGCCGTCGCCATTa > 2:183162/1‑139 (MQ=255) gTCGTTTTCACACAGCTCGACAATTGCGCGCACCTGAACGGGCAGGCCAGCT‑GCCTGCAGCTGCTCGGCGCTCTGCCAG‑GCCAACTGTTCGGCAAAGCCACTCTGGCTGGCAAAGCCGATCAGCCAGCCGTCGCCATTACCGCTGTTGGc > 2:1419143/1‑150 (MQ=255) gTCGTGTTCACCCAGCTCGGCAAGGGCGCGCACCTGAACGGGCAGGCCAGCT‑GCCTGCAGCTGCTCGGCGCTCTGCCAG‑GCCAACTGTTCGGCAAAGCCACTCTGGCTGGCAAAGCCGATCAGCCAGCCGTCGCCATTACCGCTGTTGGc < 1:174549/150‑1 (MQ=255) tttCACCCAGCTCGGCAAGGGCGCGCACCTGAACGGGCAGGCCAGCT‑GCCTGCAGCTGCTCGGCGCTCTGCCAG‑GCCAACTGTTCGGCAAAGCCACTCTGGCTGGCAAAGCCGATCAGCCAGCCGTCGCCATTACCGCTGTTGGCGACGt > 1:1062176/1‑150 (MQ=255) ttCACCCAGCTCGGCAAGGGCGCGCACCTGAACGGGCAGGCCAGCT‑GCCTGCAGCTGCTCGGCGCTCTGCCAG‑GCCAACTGTTCGGCAAAGCCACTCTGGCTGGCAAAGCCGATCAGCCAGCCGTCGCCATTACCGCTGTTGGCGACGtt < 1:1838231/150‑1 (MQ=255) ttCACCCAGCTCGGCAAGGGCGCGCACCTGAACGGGCAGGCCAGCT‑GCCTGCAGATGCTAGGCG‑GATACTGGTGCCTACTGTTCGGCAAAGCCACTCTGCCTGGCAAAGCCGATCAGCCAGCCGTCGCCATTACCGCTGTTGGCGACGtt < 1:1621969/150‑1 (MQ=255) aCCCAGCTCGGCAAGGGCGCGCACCTGAACGGGCAGGCCAGCT‑GCCTGCAGCTGCTCGGCGCTCTGCCAG‑GCCAACTGTTCGGCAAAGCCACTCTGGCTGGCAAAGCCGATCAGCCAGCCGTCGCCATTACCGCTGTTgg < 2:702079/140‑1 (MQ=255) aCCCAGCTCGGCAAGGGCGCGCACCTGAACGGGCAGGCCAGCT‑GCCTGCAGCTGCTCGGCGCTCTGCCAG‑GCCAACTGTTCGGCAAAGCCACTCTGGCTGGCAAAGCCGATCAGCCAGCCGTCGCCATTACCGCTGTTgg > 1:702079/1‑140 (MQ=255) cccAGCTCGGCAAGGGCGCGCACCTGAACGGGCAGGCCAGCT‑GCCTGCAGCTGCTCGGCGCTCTGCCAG‑GCCAACTGTTc < 2:1774990/80‑1 (MQ=255) cccAGCTCGGCAAGGGCGCGCACCTGAACGGGCAGGCCAGCT‑GCCTGCAGCTGCTCGGCGCTCTGCCAG‑GCCAACTGTTc > 1:1774990/1‑80 (MQ=255) ccAGCTCGGCAAGGGCGCGCACCTGAACGGGCAGGCCAGCT‑GCCTGCAGCTGCTCGGCGCTCTGCCAG‑GCCAACTGTTCGGCAAAGCCACTCTGGCTGGCAAAGCCGATCAGCCAGCCGTCGCCATTACCGCTGTTGGCGACGTTGCCAc > 1:2328646/1‑150 (MQ=255) ccAGCTCGGCAAGGGCGCGCACCTGAACGGGCAGGCCAGCT‑GCCTGCAGCTGCTCGGCGCTCTGCCAG‑GCCAACTGTTCGGCAAAGCCACTCTGGCTGGCAAAGCCGATCAGCCAGCCGTCGCCATTACCGCTGTTGGCGACGTTGCCAc > 2:2023915/1‑150 (MQ=255) aGCTCGGCAAGGGCGCGCACCTGAACGGGCAGGCCAGCT‑GCCTGCAGCTGCTCGGCGCTCTGCCAG‑GCCAACTGTTCGGCAAAGCCACTctggct > 1:439610/1‑95 (MQ=255) aGCTCGGCAAGGGCGCGCACCTGAACGGGCAGGCCAGCT‑GCCTGCAGCTGCTCGGCGCTCTGCCAG‑GCCAACTGTTCGGCAAAGCCACTctggct < 2:439610/95‑1 (MQ=255) aGCTCGGCAAGGGCGCGCACCTGAACGGGCAGGCCAGCT‑GCCTGCAGCTGCTCGGCGCTCTGCCAG‑GCCAACTGTTCGGCAAAGCCACTCTGGCTGGCAAAGCCGa < 1:2151237/106‑1 (MQ=255) aGCTCGGCAAGGGCGCGCACCTGAACGGGCAGGCCAGCT‑GCCTGCAGCTGCTCGGCGCTCTGCCAG‑GCCAACTGTTCGGCAAAGCCACTCTGGCTGGCAAAGCCGa > 2:2151237/1‑106 (MQ=255) gCTCGGCAAGGGCGCGCACCTGAACGGGCAGGCCAGCT‑GCCTGCAGCTGCTCGGCGCTCTGCCAG‑GCCAACTGTTCGGCAAAGCCACTCTGGCTGGCAAAGCCGATCAGCCAGCCGTCGCCATTACCGCTGTTGGCGACGTTGCCACggg > 2:1549714/1‑150 (MQ=255) gCTCGGCAAGGGCGCGCACCTGAACGGGCAGGCCAGCT‑GCCTGCAGCTGCTCGGCGCTCTGCCAG‑GCCAACTGCTCGGCAAAGCCACTCTGGCTGGCAAAGCCGATCAGCCAGCCGTCGCCATTACCGCTGTTGGCGACGTTGCCACggg < 1:160804/150‑1 (MQ=255) aGGGCGCGCACCTGAACGGGCAGGCCAGCT‑GCCTGCAGCTGCTCGGCGCTCTGCCAG‑GCCAACTGTTCGGCAAAGCCACTCTGGCTGGCAAAGCCGATCAGCCAGCCGTCGCCATTACCGCTGTTGGCGACGTTGCCACGGGCTgcgcgc > 2:2242588/1‑150 (MQ=255) cgcgcACCTGAACGGGCAGGCCAGCT‑GCCTGCAGCTGCTCGGCGCTCTGCCAG‑GCCAACTGTTCGGCAAAGCCACTCTGGCTGGCAAAGCCGATCAGCCAGCCGTCGCCATTACCGCTGTTGGCGACGTTGCCACGGGCTGCGCGCACtt < 1:2194849/150‑1 (MQ=255) aCCTGAACGGGCAGGCCAGCT‑GCCTGAAGCTGCTCGGCGCTCTGCCAG‑GCAAACTGTTCGGCAAAGCCACTCTGGCTGGCAAAGCCGATCAGCCAGCCGTCGCCATTACCGCTGTTGGCGACGTTGCCACGGGCTGCGCGCACTTGACGt > 1:1377842/1‑150 (MQ=255) ccTGAACGGGCAGGCCAGCT‑GCCTGCAGCTGCTCGGCGCTCTGCCAG‑GCCAACTGTTCGGCaaa > 2:967136/1‑64 (MQ=255) ccTGAACGGGCAGGCCAGCT‑GCCTGCAGCTGCTCGGCGCTCTGCCAG‑GCCAACTGTTCGGCaaa < 1:967136/64‑1 (MQ=255) cTGAACGGGCAGGCCAGCT‑GCCTGCAGCTGCTCGGCGCTCTGCCAG‑GCCAACTGTTCGGCAAAGCCACTCTGGCTGGCAAAGCCGATCAGCCAGCCGTCGCCATTACCGCTGTTGGCGACGTTGCCACGGGCTGCGCGCACTTGACGttt > 2:2362800/1‑150 (MQ=255) gAACGGGCAGGCCAGCT‑GCCTGCAGCTGCTCGGCGCTCTGCCAG‑GCCAACTGTTCGGCAAAGCCACTCTGGCTGGCAAAGCCGATCAGCCAGCCGTCGCCATTACCGCTGTTGGCGACGTTGCCACGGGCTGCGCGCACTTGACGTTTCt > 2:1432296/1‑150 (MQ=255) gAACGGGCAGGCCAGCT‑GCCTGCAGCTGCTCGGCGCTCTGCCAG‑GCCAACTGTTCGGCAAAGCCACTCTGGCTGGCAAAGCCGATCAGCCAGCCGTCGCCATTACCGCTGTTGGCGACGTTGCCACGGGCTGCGCGCACTTGACGTTTCt > 2:467323/1‑150 (MQ=255) aaCGGGCAGGCCAGCT‑GCCTGCAGCTGCTCGGCGCTCTGCCAG‑GCCAACTGTTCGGCAAAGCCACTCTGGCTGGCAAAGCCGATCAGCCAGCCGTCGCCATTACCGCTGTTGGCGACGTTGCCACGGGCTGCGCGCACTTGACGTTTCtt < 2:2108399/150‑1 (MQ=255) aaCGGGCAGGCCAGCT‑GCCTGCAGCTGCTCGGCGCTCTGCCAG‑GCAAACTGTTCGGCCAAGCCACTCTGGCTGGCAAAGCCGATCAGCCAGCCGTCGCCATTACCGCTGTTGGCGACGTTGCCACGGGCTGCGCGCACTTGACGTTTCtt > 1:925907/1‑150 (MQ=255) cgagcAGCT‑GCAGGCAGCTGCTCGGCGCTCTGCCAG‑GCCAACTGTTCGGCAAAGCCACTCTGGCTGGCAAAGCCGATCAGCCAGCCGTCGCCATTACCGCTGTTGGCGACGTTGCCACGGGCTGCGCGCACTTGACGTTTCTTgcggcgg > 1:769543/5‑150 (MQ=255) aGGCCAGCT‑GCCTGCAGCTGCTCGGCGCTCTGCCAG‑GCCAACTGTTCGGCAAAGCCACTCTGGCTGGCAAAGCCGATCAGCCAGCCGTCGCCATTACCGCTGTTGGCGACGTTGCCACGGGCTGCGCGCACTTGACGTTTCTTgcggcgg < 2:1292813/150‑1 (MQ=255) ggCCAGCT‑GCCTGCAGCTGCTCGGCGCTCTGCCAG‑GCCAACTGTTCGGCAAAGCCACTCTGGCTGGCAAAGCCGATCAGCCAGCCGTCGCCATTACCGCTGTTGGCGACGTTGCCACGGGCTGCGCGCACTTGACGTTTCTTgcggcggc > 1:1646840/1‑150 (MQ=255) gCCAGCT‑GCCTGCAGCTGCTCGGCGCTCTGCCAG‑GCCAACTGTTCGGCAAAGCCACTCTGGCTGGCAAAGCCGATCAGCCAGCCGTCGCCATTACCGCTGTTGGCGACGTTGCCACGGGCTGCGCGCACTTGACGTTTCTTgcggcggcg > 2:1606753/1‑150 (MQ=255) cccAGCT‑GCCTGCAGCTGCTCGGCGCTCCGCCAG‑GCCAACTGTTCGGCAAAGCCACTCTGGCTGGCAAAGCCGATCAGCCAGCCGTCGCCATTACCGCTGTTGGCGACGTTGCCACGGGCTGCGCGCACTTGACGTTTCTTgcggcggcg < 1:1219359/149‑1 (MQ=255) ct‑gcctgcAGCTGCTCGGCACTCTGCCAG‑GCCAACTGTTCGGCAAAGCCACTCTGGCTGGCAAAGCCGATCAGCCAGCCGTCGCCATTACCGCTGTTGGCGACGTTGCCACGGGCTGCGCGCACTTGACGTTTCTTGCGGCGGCGGTCGa > 2:216622/1‑150 (MQ=255) t‑gcctgcAGCTGCTCGGCGCTCTGCCAG‑GCCAACTGTTCGGCAAATCCACTCTGGCTGTCAAAGCCGATCAGCCAGCCGTCGCCATTACCGCTGTTGGCGACGTTGCCACGGGCTGCGTGCACTTGACGTTTCTTGCGGCGGCGGTCGAg < 2:498354/150‑1 (MQ=255) t‑gcctgcAGCTGCTCGGCGCTCTGCCAG‑GCCAACTGTTCGGCAAAGCCACTCTGGCTGGCAAAGCCGATCAGCCAGCCGTCGCCATTACCGCTGTTGGCGACGGTGCCACGGGCTGCGCGCACTTGACGTTTCTTGCGGCGGCGGTCGAg < 1:1043838/150‑1 (MQ=255) | CGAGTACCTTGCGCTCGAAGGCGCGAGCGCTGTCGGGCGCTTCGCCGTCGCCGAAGGTACTCACCACG‑AAGAGCGCGCGATGGGCCTGGCGCAGGTCGTTTTCACCCAGCTCGGCAAGGGCGCGCACCTGAACGGGCAGGCCAGCT‑GCCTGCAGCTGCTCGGCGCTCTGCCAG‑GCCAACTGTTCGGCAAAGCCACTCTGGCTGGCAAAGCCGATCAGCCAGCCGTCGCCATTACCGCTGTTGGCGACGTTGCCACGGGCTGCGCGCACTTGACGTTTCTTGCGGCGGCGGTCGAG > NC_002947/996206‑996500 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |