| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,130,198 | A→T | 9.3% | intergenic (‑247/+57) | gcvH‑I ← / ← PP_0990 | glycine cleavage system protein H/DoxX family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,130,198 | 0 | A | T | 9.3% | 316.9 / 20.9 | 107 | intergenic (‑247/+57) | gcvH‑I/PP_0990 | glycine cleavage system protein H/DoxX family protein |
| Reads supporting (aligned to +/- strand): ref base A (53/44); new base T (5/5); total (58/49) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.08e-01 | |||||||||||
Only 100 of 108 total aligned reads displayed.
ATCAATAGATTACGTAAATTTACGGAGAAGCCGTATTTATTGTGTGGAATGATATCGTTACAGGTGCCTCTGAGAGGAAAAGGGTTTGA‑GCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCGTTTTCGCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTGGCGAGGTGCCAATGGCCTTCGGTCATCTCACTTTCAGCAGATGATCCAGCGAAAACGCGCCGGCGCCTCGGGCAACCAGGAGCAGCAAGAGCCCTGCCCAGGTCAGGTGGGTGG > NC_002947/1130055‑1130346 | atCAATAGATTACGTAAATTTACGGAGAAGCCGTATTTATTGTGTGGAATGATATCGTTACAGGTGCCTCTGAGAGGAAAAGGGTTTGA‑GCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCGTTTTCGCTACGTCGTAGc > 1:2311896/1‑150 (MQ=255) aaTAGATTACGTAAATTTACGGAGAAGCCGTATTTATTGTGTGGAATGATATCGTTACAGGTGCCTCTGAGAGGAAAAGGGTTTGA‑GCATCAAACCCTTGTGCACCGAAGGACAGGAGGCTGTGTATCGTTTTCGCTACGACGTAGCGaa > 1:1331311/1‑150 (MQ=255) aTAGATTACGTAAATTTACGGAGAAGCCGTGTTTATTGTGTGGAATGATATCGTTACAGGTGCCTCTGAGAGGAAAAGGGTTTGA‑GCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCGTTTTCGCTACGACGTAGCGaaa > 1:176187/1‑150 (MQ=255) tAGATTACGTAAATTTACGGAGAAGCCGTATTTATTGTGTGGAATGATATCGTTACAGGTGCCTCTGAGAGGAAAAGGGTTTGA‑GCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCGTTTTCGCTACGTCGTAGCGaaaa < 2:2311896/150‑1 (MQ=255) aTTACGTAAATTTACGGAGAAGCCGTATTTATTGTGTGGAATGATATCGTTACAGGTGCCTCTGAGAGGAAAAGGGTTTGA‑GCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCGTTTTCGCTACGACGTAGCGAAAACGa < 2:2198512/150‑1 (MQ=255) ttAAATTTACGGAGAAGCCGTATTTATTGTGTGGAATGATATCGTTACAGGTGCCTCTGAGAGGAAAAGGGTTTGA‑GCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCGTTTTCGCTACGACGTAGCGAAAACGATACAt < 2:1022439/149‑1 (MQ=255) gTAAATTTACGGAGAAGCCGTATTTATTGTGTGGAATGATATCGTTACAGGTGCCTCTGAGAGGAAAAGGGTTTGA‑GCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCGTTTTCGCTACGACGTAGCGAAAACGATACAt > 1:2074679/1‑150 (MQ=255) aaaTTTACGGAGAAGCCGTATTTATTGTGTGGAATGATATCGTTACAGGTGCCTCTGAGAGGAAAAGGGTTTGA‑GCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCGTTTTCGCTACGACGTAGCGAAAACGATACAtgt < 2:513221/150‑1 (MQ=255) tttACGGAGAAGCCGTATTTATTGTGTGGAATGATATCGTTACAGGTGCCTCTGAGAGGAAAAGGGTTTGA‑GCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCGTTTTCGCTACGTCGTAGCGaaaa > 2:1704954/1‑137 (MQ=255) tttACGGAGAAGCCGTATTTATTGTGTGGAATGATATCGTTACAGGTGCCTCTGAGAGGAAAAGGGTTTGA‑GCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCGTTTTCGCTACGTCGTAGCGaaaa < 1:1704954/137‑1 (MQ=255) tttACGGAGAAGCCGTATTTATTGTGTCGAATACTTTCAGTACGAACCGAAGGGAAAGGAAAATGGTTTGA‑ACTTCATGCCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCGTTTTCGCTACGACGTAGCGAAAACGATACATgtggt < 1:542292/150‑1 (MQ=255) tACGGAGAAGCCGTATTTATTGTGTGGAATGATATCGTTACAGGTGCCTCTGAGAGGAAAAGGGTTTGA‑GCATCAAAACCTTGTGCACCGACGGCGAGGAGGCTGTGTATCGTTTTCGCTACGACGTAGCGAAAACGATACATGTGGTGc < 1:2180629/150‑1 (MQ=255) ggAGAAGCCGTATTTATTGTGTGGAATGATATCGTTACAGGTGCCTCTGAGAGGAAAAGGGTTTGA‑GCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCGTTTTCGCTACGACGTAGCGAAAACGATACATGTGGTGCCTg > 1:1017096/1‑150 (MQ=255) ccGTATTTATTGTGTGGAATGATATCGTTACAGGTGCCTCTGAGAGGAAAAGGGTTTGA‑GCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCGTTTTCGCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTGGc > 1:1734436/1‑150 (MQ=255) tatttattGTGTGGAATTATATCGTTACAGGTGCCTCTGAGAGGAAAAGGGTTTGA‑GCAGCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCGTTTTCGCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTGGCGAg < 2:800690/150‑1 (MQ=255) tatttattGTGTGGAATGATATCGTTACAGGTGCCTCTGAGAGGAAAAGGGTTTGA‑GCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCGTTTTCGCTACGACGTAGCGAAAACGATCCATGAGATGCGTAGAGTGCCGAg > 2:1946701/1‑150 (MQ=255) tatttattGTGTGGAATGATATCGTTACAGGTGCCTCTGAGAGGAAAAGGGTTTGA‑GCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCGTTTTCGCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTGGCGAg < 1:279961/150‑1 (MQ=255) tttattGTGTGGAATGATATCGTTACAGGTGCCTCTGAGAGGAAAAGGGTTTGA‑GCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCGTTTTCGCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTGGCGAGGt < 1:51484/150‑1 (MQ=255) tttattGTGTGGAATGATATCGTTACAGGTGCCTCTGAGAGGAAAAGGGTTTGA‑GCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCGTTTTCGCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTGGCGAGGt < 2:2074679/150‑1 (MQ=255) ttattGTGTGGAATGATATCGTTACAGGTGCCTCTGAGAGGAAAAGGGTTTGA‑GCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCGTTTTCGCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTGGCGAGGTg < 2:1859581/150‑1 (MQ=255) tgtgGAATGATATCGTTACAGGTGCCTCTGAGAGGAAAAGGGTTTGA‑GCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCGTTTTCGCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTGGCGAGGTGCCAATg < 1:1364104/150‑1 (MQ=255) gtgGAATGATATCGTTACAGGTGCCTCTGAGAGGAAAAGGGTTTGA‑GCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCGTTTTCGCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTGGCGAGGTGCCAATgg > 2:1691170/1‑150 (MQ=255) tgGAATGATATCGTTACAGGTGCCTCTGAGAGGAAAAGGGTTTGA‑GCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCGTTTTCGCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTGGCGAGGTGCCAATGGc > 2:1779661/1‑150 (MQ=255) gAATGATATCGTTACAGGTGCCTCTGAGAGGAAAAGGGTTTGA‑GCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCGTTTTCGCTACGACGTAGCGAAAACGATACATGTGGTGCCt < 2:2164551/126‑1 (MQ=255) gAATGATATCGTTACAGGTGCCTCTGAGAGGAAAAGGGTTTGA‑GCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCGTTTTCGCTACGACGTAGCGAAAACGATACATGTGGTGCCt > 1:2164551/1‑126 (MQ=255) aaTGATATCGTTACAGGTGCCTCTGAGAGGAAAAGGGTTTGA‑GCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCGTTTTCGCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTGGCGAGGTGCCAATGGCCtt < 2:1017096/150‑1 (MQ=255) tatCGTTACAGGTGCCTCTGAGAGGAAAAGGGTTTGA‑GCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCGTTTTCGCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTGGCGAGGTGCCAATGGCCTTCGGTc < 2:176187/150‑1 (MQ=255) tCGTTACAGGTGCCTCTGAGAGGAAAAGGGTTTGA‑GCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCGTTTTCGCTACGACGTAGCGAAAACGATa > 2:2125261/1‑106 (MQ=255) tCGTTACAGGTGCCTCTGAGAGGAAAAGGGTTTGA‑GCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCGTTTTCGCTACGACGTAGCGAAAACGATa < 1:2125261/106‑1 (MQ=255) tCGTTACAGGTGCCTCTGAGAGGAAAAGGGTTTGA‑GCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCGTTTTCGCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTGGCGAGGTGCCAATGGCCTTCGGTCAt > 2:235953/1‑150 (MQ=255) ttACAGGTGCCTCTGAGAGGAAAAGGGTTTGA‑GCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCGTTTTGGCTACGACGTAGCGAAAAGGATGCATGTGGTGGGTGGACTGGCGGGGATCCGAGAGCCTTCGGTGAtgtc > 2:1092103/1‑150 (MQ=255) ttACAGGTGCCTCTGAGAGGAAAAGGGTTTGA‑GCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCGTTTTCGCTACGTCGTAGCGaa > 2:2085963/1‑96 (MQ=255) ttACAGGTGCCTCTGAGAGGAAAAGGGTTTGA‑GCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCGTTTTCGCTACGTCGTAGCGaa < 1:2085963/96‑1 (MQ=255) aCAGGTGCCTCTGAGAGGAAAAGGGTTTGA‑GCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCGTTTTCGCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTGGCGAGGTGCCAATGGCCTTCGGTCATCTCAc < 1:235953/150‑1 (MQ=255) ttgtctctGAGAGGAAAAGGCTTTGC‑GCATCAACCCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCGTTTTCGCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTGGCGAGGTGCAAATGGCCTTCGGTCATCTCACTTTc < 1:1092103/146‑1 (MQ=255) gTGCCTCTGAGAGGAAAAGGGTTTGA‑GCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCGTTTTCGCTACGACGTAGCGAAAACGATACATGTGGTGCCt < 2:2296474/109‑1 (MQ=255) gTGCCTCTGAGAGGAAAAGGGTTTGA‑GCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCGTTTTCGCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTGGCGAGGTGCCAATGGCCTTCGGTCATCTCACTTTc > 1:527686/1‑150 (MQ=255) gTGCCTCTGAGAGGAAAAGGGTTTGA‑GCATCAAACCCTTGGGCACCGACGGCGAGGAGGCTGTGTATCGTTTTCGCTACGACGTAGCGAAAACGATACATGTGGTGCCt > 1:2296474/1‑109 (MQ=255) tctGAGAGGAAAAGGGTTTGA‑GCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCGTTTTCGCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTGGCGAGGTGCCAATGGCCTTCGGTCATCTCACTTTcagcag > 2:1825796/1‑150 (MQ=255) tGAGAGGAAAAGGGTTTGA‑GCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCGTTTTCGCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTGGCGAGGTGCCTATGGCCTTCGGTCATCTCACTTTCAGCAgat > 2:1669106/1‑150 (MQ=255) gagaGGAAAAGGGTTTGA‑GCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCGTTTTCGCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTGGCGAGGTGCCAATGGCCTTCGGTCATCTCACTTTCAGCAgatg > 2:833971/1‑150 (MQ=255) agagGAAAAGGGTTTGA‑GCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCGTTTTCGCTACGACGTAGCGAAAACGATa < 1:557418/88‑1 (MQ=255) agagGAAAAGGGTTTGA‑GCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCGTTTTCGCTACGACGTAGCGAAAACGATa > 2:557418/1‑88 (MQ=255) gagGAAAAGGGTTTGA‑GCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCGTTTTCGCTACGACGTAGCGAAAACGATACATGTGGTGc > 1:2000734/1‑97 (MQ=255) gAAAAGGGTTTGA‑GCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCGTTTTGGCTATGACGTAGCGAGCACGGCGCATACCGTGCCTGGACTGGCGAGTGGCCAACGGCCTCCGGTAATCTGACTGTCAGCTGATGATcta > 1:1852130/1‑148 (MQ=255) gAAAAGGGTTTGA‑GCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCGTTTTCGCTACGACGTAGCGAAAACGATACAtgtg > 2:1635608/1‑90 (MQ=255) gAAAAGGGTTTGA‑GCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCGTTTTCGCTACGACGTAGCGAAAACGATACAtgtg < 1:1635608/90‑1 (MQ=255) gAAAAGGGTTTGA‑GCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCGTTTTCGCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTGGCGAGGTGCCAATGGCCTTCGGTCATCTCACTTTCAGCAGATGATCCa > 2:739502/1‑150 (MQ=255) gAAAAGGGTTTGA‑GCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCGTTTTCGCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTGGCGAGGTGCCAATGGCCTTCGGTCATCTCACTTTCAGCAGATGATCCa > 2:1202879/1‑150 (MQ=255) acaaGGGTTTGATGC‑TCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCGTTTTCGCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTGGCGAGGTGCCAATGGCCTTCGGTCATCTCACTTTCAGCAGATGATCCAg > 1:1010844/3‑150 (MQ=255) aaaaGGGTTTGA‑GCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCGTTTTCGCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTGGCGAGGTGCCAATGGCCTTCGGTCATCTCACTTTCAGCAGATGATCCAg > 2:1176329/1‑150 (MQ=255) aaaaGGGTTTGA‑GCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCGTTTTCGCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTGGCGAGGTGCCAATGGCCTTCGGTCATCTCACTTTCAGCAGATGATCCAg > 2:1023239/1‑150 (MQ=255) caaGGGTTTGATGC‑TCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCGTTTTCGCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTGGCGAGGTGCCAATGGCCTTCGGTCATCTCACTTTCAGCAGATGATCCAGc > 1:2081536/2‑150 (MQ=255) caaGGGTTTGATGC‑TCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCGTTTTCGCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTGGCGAGGTGCCAATGGCCTTCGGTCATCTCACTTTCAGCAGATGATCCAGc > 1:179280/2‑150 (MQ=255) aaaGGGTTTGA‑GCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCGTTTTCGCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTGGCGAGGTGCCAATGGCCTTCGGTCATCTCACTTTCAGCAGATGATCCAGc > 2:1035126/1‑150 (MQ=255) aaaGGGTTTGA‑GCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCGTTTTCGCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTGGCGAGGTGCCAATGGCCTTCGGTCATCTCACTTTCAGCAGATGATCCAGc > 1:1346148/1‑150 (MQ=255) aaaGGGTTTGA‑GCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCGTTTTCGCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTGGCGAGGTGCCAATGGCCTTCGGTCATCTCACTTTCAGCAGATGATCCAGc > 2:128387/1‑150 (MQ=255) aaGGGTTTGATGC‑TCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCGTTTTCGCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTGGCGAGGTGCCAATGGCCTTCGGTCATCTCAc > 2:2034158/1‑130 (MQ=255) aaGGGTTTGA‑TGCTCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCGTTTTCGCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTGGCGAGGTGCCAATGGCCTTCGGTCATCTCACTTTCAGCAGATGATCCAGCg > 2:2180050/1‑150 (MQ=255) aaGGGTTTGA‑GCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCGTTTTCGCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTGGCGAGGTGCCAATGGCCTTCGGTCATCTCACTTTCAGCAGATGATCCAGc < 2:615578/149‑1 (MQ=255) aaGGGTTTGA‑GCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCGTTTTCGCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTGGCGAGGTGCCAATGGCCTTCGGTCATCTCACTTTCAGCAGATGATCCAGc > 1:615578/1‑149 (MQ=255) aaGGGTTTGA‑GCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCGTTTTCGCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTGGCGAGGTGCCAATGGCCTTCGGTCATCTCACTTTCAGCAGATGATCCAGCg > 2:603750/1‑150 (MQ=255) tttGA‑GCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCGTTTTCGCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTGGCGAGGTGCCAATGGCCTTCGGTCATCTCACTTTCAGCAGATGATCCAGCGAAAAc < 1:1202879/150‑1 (MQ=255) tttGA‑GCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCGTTTTCGCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTGGCGAGGTGCCAATGGCCTTCGGTCATCTCACTTTCAGCAGATGATCCAGCGAAAAc > 1:1116454/1‑150 (MQ=255) a‑GCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCGTTTTCGCTACGACGTAGCGAAAACGATACATGTGGCGCCTGGACTGGCGAGGTGCCAATGGCCTTCGGACATCTCACTTTCAGCAGATGATCCAGCGAAAACgcgc > 1:426925/1‑150 (MQ=255) gCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCGTTTTCGCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTGGCGAGGt > 1:1849487/1‑96 (MQ=255) gCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCGTTTTCGCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTGGCGAGGt < 2:1849487/96‑1 (MQ=255) cATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCGTTTTCGCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTGGCGAGGTGCCAATGGCCTTCGGTCATCTCACTTTCAGCAGATGATCCAGCGAAAACGCGCCg > 1:1523213/1‑150 (MQ=255) tCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCGTTTTCGCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTGGCGAGGTGCCAATGGCCTTCGGTCATCTCACTTTCAGCAGATGATCCAGCGAAAACGCGCCGgc < 1:1691170/150‑1 (MQ=255) cAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCGTTTTCGCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTGGCGAGGTGCCAATGGCCTTCGGTCATCTCACTTTCAGCAGATGATCCAGCGAAAACGCGCCGgcg > 1:1482198/1‑150 (MQ=255) aaCCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCGGTTTCGATACGACGTAGCGAAAACGAGACATGTGGTGCCTGGACTGGCGAGGTGCCAATGGCCTTCGGTCATCTCACTTTCAGCAGCTGGTCCCACGTAATCGCGCGTgcgct > 1:2213501/1‑149 (MQ=255) cccTTGTGCACCGACGGCGAGGAGGCTGTGTATCGTTTTCGCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTGGCGAGGTGCCAATGGCCTTCGGTCATCTCACTTTCAGCAGATGATCCAGCGAAAACGCGCCGGCGCCTc < 1:313392/150‑1 (MQ=255) ccTTGTGCACCGACGGCGAGGAGGCTGTGTATCGTTTTCGCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTGGCGAGGTGCCAATGGCCTTCGGTCATCTCACttt > 2:747533/1‑114 (MQ=255) ccTTGTGCACCGACGGCGAGGAGGCTGTGTATCGTTTTCGCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTGGCGAGGTGCCAATGGCCTTCGGTCATCTCACttt < 1:747533/114‑1 (MQ=255) ccTTGTGCACCGACGGCGAGGAGGCTGTGTATCGTTTTCGCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTGGCGAGGTGCCAATGGCCTTCGGTCATCTCACTTTcagca > 1:604879/1‑119 (MQ=255) ccTTGTGCACCGACGGCGAGGAGGCTGTGTATCGTTTTCGCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTGGCGAGGTGCCAATGGCCTTCGGTCATCTCACTTTcagca < 2:604879/119‑1 (MQ=255) cTTGTGCACCGACGGCGAGGAGGCTGTGTATCGTTTTCGCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTGGCGAGGTGCCAATGGCCTTCGGTCATCTCACTTTCAGCAGATGATCCAGCGAAAACGCGCCGGCGCCTCgg > 1:2216485/1‑150 (MQ=255) cTTGTGCACCGACGGCGAGGAGGCTGTGTATCGTTTTCGCTAAGACGTAGCGAAAACGATACATGTGGTGCCTGGACTGGCGAGGTGCCAATGGCCTTCGGTCATCTCACTTTCAGCAGATGATCCAGCGAAAACGCGCCGGCGCCTCgg < 2:1331311/150‑1 (MQ=255) ttGTGCACCGACGGCGAGGAGGCTGTGTATCGTTTTCGCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTGGCGAGGTGCCAATGGCCTTCGGTCATCTCACTTTCAGCAGATGATCCAGCGAAAACGCGCCGGCGCCTCggg < 1:807010/150‑1 (MQ=255) aCCGACGGCGAGGAGGCTGTGTATCGTTTTCGCTACGACGTAGCGAAAACGATACATGTGGTGCCTg > 1:1682241/1‑67 (MQ=255) aCCGACGGCGAGGAGGCTGTGTATCGTTTTCGCTACGACGTAGCGAAAACGATACATGTGGTGCCTg < 2:1682241/67‑1 (MQ=255) ccGACGGCGAGGAGGCTGTGTATCGTTTTCGCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTGGCGAGGTGCCAATGGCCTTCGGTCATCTCACTTTCAGCAGATGATCCAGCGAAAACGCGCCGGCGCCTCGGGCAACCAg < 1:1825796/150‑1 (MQ=255) ccGACGGCGAGGAGGCTGTGTATCGTTTTCGCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTGGCGAGGTGCCAATGGCCTTCGGTCATCTCACTTTCAGCAGATGATCCAGCGAAAACGCGCCGGCGCCTCGGGCAACCAg < 2:1346148/150‑1 (MQ=255) cGAGGAGGCTGTGTATCGTTTTCGCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTGGCGAGGTGCCAATGGCCTTCGGTCATCTCACTTTCAGAAGATGATCCAGCGAAAACGCGCCGGCGCCTCGGGCAACCAGGagccga < 2:2213501/150‑4 (MQ=255) ggCTGTGTATCGTTTTCGCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTGGCGAGGTGCCAATGGCCTTCGGTCATCTCACTTTCAGCAGATGATCCAGCGAAAACGCGCCGGCGCCTCGGGCAACCAGGAGCAGCAAGAGc < 2:2216485/150‑1 (MQ=255) gCTGTGTATCGTTTTCGCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTGGCGAGGTGCCAATGGCCTTCGGTCATCTCACTTTCAGCAGATGATCCAGCGAAAACGCGCCGGCGCCTCGGGCAACCAGGAGCAGCAAGAGcc > 2:1287831/1‑150 (MQ=255) gCTGTGTATCGTTTTCGCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTGGCGAGGTGCCAATGGCCTTCGGTCATCTCACTTTCAGCAGATGATCCAGCGAAAACGCGCCGGCGCCTCGGGCAACCAGGAGCAGCAAGAGc > 1:2106753/1‑149 (MQ=255) gCTGTGTATCGTTTTCGCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTGGCGAGGTGCCAATGGCCTTCGGTCATCTCACTTTCAGCAGATGATCCAGCGAAAACGCGCCGGCGCCTCGGGCAACCAGGAGCAGCAAGAGc < 2:2106753/149‑1 (MQ=255) tgtgTATCGTTTTCGCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTGGCGAGGTGCCAATGGCCTTCGGTCATCTCACTTTCAGCAGATGATCCAGCGAAAACGCGCCGGCGCCTCGGGCAACCAGGAGCAGCAAGAGCCCt < 2:1852130/150‑1 (MQ=255) tATCGTTTTCGCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTGGCGAGGTGCCAATGGCCTTCGGTCATCTCACTTTCAGCAGATGATCCAGCGAAAACGCGCCGGCGCCTCGGGCGACCAGGAGCAGCAAGAGCCCTGccc > 1:1793629/1‑150 (MQ=255) tATCGTTTTCGCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTGGCGAGGTGCCAATGGCCTTCGGTCATCTCACTTTCAGCAGATGATCCAGCGAAAACGCGCCGGCGCCTCGGGCAACCAGGAGCAGCAAGAGCCCTGccc < 1:1946701/150‑1 (MQ=255) aTCGTTTTCGCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTGGCGAGGTGCCAATGGCCTTCGGTCATCTCACTTTCAGCAGATGATCCAGCGAAAACGCGCCGGCGCCTCGGGCAACCAGGAGCAGCAAGCGCCCTGCCca < 2:1010844/150‑1 (MQ=255) tCGTTTTCGCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTGGCGAGGTGCCAATGGCCTTCGGTCATCTCACTTTCAGCAGATGATCCAGCGAAAACGCGCCGGCGCCTCGGGCAACCAGGAGCAGCAAGAGCCCTGCCcag > 1:2291233/1‑150 (MQ=255) cGTTTTCGCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTGGCGAGGTGCCAATGGCCTTCGGTCATCTCACTTTCAGCAGATGATCCAGCGAAAACGCGCCGGCGCCTCGGGCAACCAGGAGCAGCAAGAGCCCTGCCcagg < 2:527686/150‑1 (MQ=255) ttttCGCTACGTCGTAGCGAAAACGATACATGTGGTGCCTGGACTGGCGAGGTGCCAATGGCCTTCGGTCATCTCACTTTCTGCAGATGATCCAGCGAAAACGCGCCGGCGCCTCgg > 1:42852/1‑117 (MQ=255) ttttCGCTACGTCGTAGCGAAAACGATACATGTGGTGCCTGGACTGGCGAGGTGCCAATGGCCTTCGGTCATCTCACTTTCAGCAGATGATCCa < 2:1215283/94‑1 (MQ=255) ttttCGCTACGTCGTAGCGAAAACGATACATGTGGTGCCTGGACTGGCGAGGTGCCAATGGCCTTCGGTCATCTCACTTTCAGCAGATGATCCa > 1:1215283/1‑94 (MQ=255) ttttCGCTACGTCGTAGCGAAAACGATACATGTGGTGCCTGGACTGGCGAGGTGCCAATGGCCTTCGGTCATCTCACTTTCAGCAGATGATCCAGCGAAAACGCGCCGGCGCCTCgg < 2:42852/117‑1 (MQ=255) cTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTGGCGAGGTGCCAATGGCCTTCGGTCATCTCACTTTCAGCAGATGATCCAGCGAAAACGCGCCGGCGCCTCGGGCAACCAGGAGCAGCAAGAGCCCTGCCCAGGTCAggtgg > 2:89225/1‑150 (MQ=255) gacgTAGCGAAAACGATACATGTGGTGCCTGGACTGGCGAGGTGCCAATGGCCTTCGGTCATCTCACTTTCAGCAGATGATCCAGCGAAAACGCGCCGGCGCCTCGGGCAACCAGGAGCAGCAAGAGCCCTGCCCAGGTCAGgtgggtgg < 1:1035126/150‑1 (MQ=255) | ATCAATAGATTACGTAAATTTACGGAGAAGCCGTATTTATTGTGTGGAATGATATCGTTACAGGTGCCTCTGAGAGGAAAAGGGTTTGA‑GCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCGTTTTCGCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTGGCGAGGTGCCAATGGCCTTCGGTCATCTCACTTTCAGCAGATGATCCAGCGAAAACGCGCCGGCGCCTCGGGCAACCAGGAGCAGCAAGAGCCCTGCCCAGGTCAGGTGGGTGG > NC_002947/1130055‑1130346 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |