| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 146,127 | T→A | 13.2% | intergenic (+32/‑116) | gltP → / → PP_0138 | glutamate/aspartate‑proton DAACS transporter/membrane protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 146,127 | 0 | T | A | 13.2% | 312.1 / 36.1 | 114 | intergenic (+32/‑116) | gltP/PP_0138 | glutamate/aspartate‑proton DAACS transporter/membrane protein |
| Reads supporting (aligned to +/- strand): ref base T (46/53); new base A (8/7); total (54/60) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.83e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.14e-02 | |||||||||||
Only 100 of 115 total aligned reads displayed.
TCATTGCTCGCTGGGAAGGCATGTACGACGCGGTCAAGGGCGAGCAGTACTACGCCTCGCTGATGGCCGAGAAGCAGGGAGCTGTAGTGGTTGGCGAAACCGCCAAGCGCTGAGCCTGATGGCTGTTTGACCAAGAGCCCCGACTTGTCGGGGCTTTTTGTTATCTG‑CGAGATCTTGAGCCGCGCCTACAAAGGCTCGCGATCGCCAGTCACAGGCTGCGATACGCTATTATTCGGGCACTTTTCAGGGGGAACATACGGATGCTCAACGGCCTTTGGCTCGGCTTTTTCCTGG > NC_002947/145983‑146276 | tCATTGCTCGCTGGGAAGGCATGTACGACGCGGTCAAGGGCGAGCAGTACTACGCCTCGCTGATGGCCGAGAAGCAGGGAGCTGTAGTGGTTGGCGAAACCGCCAAGCGCTGAGCCTGATGGCTGTTTGACCAAGAGCCCCGACTTGTCg < 1:59238/150‑1 (MQ=255) ttGCTCGCTGGGAAGGCATGTACGACGCGGTCAAGGGCGAGCAGTACTACGCCTCGCTGATGGCCGAGAAGCAGGGAGCTGTAGTGGTTGGCGAAACCGCCAAGCGCTGAGCCTGATGGCTGTTTGACCAAGAGCCCCGACTTGTCgggg > 2:342416/1‑150 (MQ=255) tGCTCGCTGGGAAGGCATGTACGACGCGGTCAAGGGCGAGCAGTACTACGCCTCGCTGATGGCCGAGAAGCAGGGAGCTGTAGTGGTTGGCGAAACCGCCAAGCGCTGAGCCTGATGGCTGTTTGACCAAGAGCCCCGACAAGTCGGGGc < 1:1856904/150‑1 (MQ=255) tCGCTGGGAAGGCATGTACGACGCGGTCAAGGGCGAGCAGTACTACGCCTCGCTGATGGCCGAGAAGCAGGGAGCTGTAGTGGTTGGCGAAACCGCCAAGCGCTGAGCCTGATGGCTGTTTGACCAAGAGCCCCGACTTGTCGGGGCttt > 1:1799473/1‑150 (MQ=255) tCGCTGGGAAGGCATGTACGACGCGGTCAAGGGCGAGCAGTACTACGCCTCGCTGATGGCCGAGAAGCAGGGAGCTGTAGTGGTTGGCGAAACCGCCAAGCGCTGAGCCTGATGGCTGTTTGACCAAGAGCCCCGACTTGTCGGGGCttt > 2:43670/1‑150 (MQ=255) cGCTGGGAAGGCATGTACGACGCGGTCAAGGGCGAGCAGTACTACGCCTCGCTGATGGCCGAGAAGCAGGGAGCTGTAGTGGTTGGCGAAACCGCCAAGCGCTGAGCCTGATGGCTGTTTGACCAAGAGCCCCGACTTGTCGGGGCtttt > 1:99934/1‑150 (MQ=255) tGGGAAGGCATGTACGACGCGGTCAAGGGCGAGCAGTACTACGCCTCGCTGATGGCCGAGAAGCAGGGAGCTGTAGTGGTTGGCGAAACCGCCAAGCGCTGAGCCTGATGGCTGTTTGACCAAGAGCCCCGACTTGTCGGGGCTTTTTGt < 2:1257119/150‑1 (MQ=255) tGGGAAGGCATGTACGACGCGGTCAAGGGCGAGCAGTACTACGCCTCGCTGATGGCCGAGAAGCAGGGAGCTGTAGTGGTTGGCGAAACCGCCAAGCGCTGAGCCTGATGGCTGTTTGACCAAGAGCCCCGACTTGTCGGGGCTTTTTGt > 2:1549743/1‑150 (MQ=255) ggAAGGCATGTACGACGCGGTCAAGGGCGAGCAGTACTACGCCTCGCTGATGGCCGAGAAGCAGGGGGCTGTAGTGGTTGGCGAAACCGCCAAGCGCTGAGCCTGATGGCTGTTTGACCAAGAGCCCCGACTTGTCGGGGCTTTTTGTTa > 2:220346/1‑150 (MQ=255) aaGGCATGTACGACGCGGTCAAGGGCGAGCAGTACTACGCCTCGCTGATGGCCGAGAAGCAGGGAGCTGTAGTGGTTGGCGAAACCGCCAAGCGCTGAGCCTTATGGCTGTTTGACCAAGAGCCCCTACTTGTCGGGGCTTTTTGTTATc > 1:2387271/1‑150 (MQ=255) aTGTACGACGCGGTCAAGGGCGAGCAGTACTACGCCTCGCTGATGGCCGAGAAGCAGGGAGCTGTAGTGGTTGGCGAAACCGCCAAGCGCTGAGCCTGATGGCTGTTTGACCAAGAGCCCCGACTTGTCGGGGCTTTTTGTTATCTG‑Cga < 1:565507/150‑1 (MQ=255) gTACGACGCGGTCAAGGGCGAGCAGTACTACGCCTCGCTGATGGCCGAGAAGCAGGGAGCTGTAGTGGTTGGCGAAACCGCCAAGCGCTGAGCCTGATGGCTGTTTGACCAAGAGCCCCGACTTGTCg < 2:1957608/128‑1 (MQ=255) gTACGACGCGGTCAAGGGCGAGCAGTACTACGCCTCGCTGATGGCCGAGAAGCAGGGAGCTGTAGTGGTTGGCGAAACCGCCAAGCGCTGAGCCTGATGGCTGTTTGACCAAGAGCCCCGACTTGTCg > 1:1957608/1‑128 (MQ=255) tACGACGCGGTCAAGGGCGAGCAGTACTACGCCTCGCTGATGGCCGAGAAGCAGGGAGCTGTAGTGGTTGGCGAAACCGCCAAGCGCTGAGCCTGATGGCTGTTTGACCAAGAGCCCCGACTTGTCGGGGCTTTTTGTTATCTG‑CGAGAt > 1:888849/1‑150 (MQ=255) tACGACGCGGTCAAGGGCGAGCAGTACTACGCCTCGCTGATGGCCGAGAAGCAGGGAGCTGTAGTGGTTGGCGAAACCGCCAAGCGCTGAGCCTGATGGCTGTTTGACCAAGAGCCCCGACTTGTCGGGGCTTTTTGTTATCTG‑CGAGAt < 1:342416/150‑1 (MQ=255) tACGACGCGGTCAAGGGCGAGCAGTACTACGCCTCGCTGATGGCCGAGAAGCAGGGAGCTGTAGTGGTTGGCGAAACCGCCAAGCGCTGAGCCTGATGGCTGTTTGACCAAGAGCCCCGACTTGTCGGGGCTGTTTGTTATCTG‑CGAGAt > 1:995277/1‑150 (MQ=255) acgCGGTCAAGGGCGAGCAGTACTACGCCTCGCTGATGGCCGAGAAGCAGGGAGCTGTAGTGGTTGGCGACCCCGCCAAGCGCTGAGCCTGATGGCTGTTTGACCAAGAGCCCCGACTTGTCGGGGCTTTTTGTTATCTG‑CGAGATCTTg < 2:2373085/150‑1 (MQ=255) acgCGGTCAAGGGCGAGCAGTACTACGCCTCGCTGATGGCCGAGAAGCAGGGAGCTGTAGTGGTTGGCGAAACCGCCAAGCGCTGAGCCTGATGGCTGTTTGACCAAGAGCCCCGACTTGTCGGGGCtttt > 1:73716/1‑131 (MQ=255) acgCGGTCAAGGGCGAGCAGTACTACGCCTCGCTGATGGCCGAGAAGCAGGGAGCTGTAGTGGTTGGCGAAACCGCCAAGCGCTGAGCCTGATGGCTGTTTGACCAAGAGCCCCGACTTGTCGGGGCtttt < 2:73716/131‑1 (MQ=255) cgcgGTCAAGGGCGAGCAGTACTACGCCTCGCTGATGGCCGAGAAGCAGGGAGCTGTAGTGGTTGGCGAAACCGCCAAGCGCTGAGCCTGATGGCTGTTTGACCAAGAGCCCCGACTTGTCGGGGCTTTTTGTTATCTG‑CGAGATCTTGa < 2:973170/150‑1 (MQ=255) gcgGTCAAGGGCGAGCAGTACTACGCCTCGCTGATGGCCGAGAAGCAGGGAGCTGTAGTGGTTGGCGAAACCGCCAAGCGCTGAGCCTGATGGCTGTTTGACCAAGAGCCCCGACTTGTCGGGGCTTTTTGTTATCTG‑CGAGATCTTGAg < 2:352004/150‑1 (MQ=255) cgGTCAAGGGCGAGCAGTACTACGCCTCGCTGATGGCCGAGCAGCAGGGAGCTGTAGTGGTTGGCGAAACCGCCCAGCGCTGAGCCTGATGGCTGTTTGACCAAGAACCCCGACTTGTGGGGCCTTTTTGTTATCTG‑TGGGATCTTGAgg > 1:37270/1‑149 (MQ=255) ggTCAAGGGCGAGCAGTACTACGCCTCGCTGATGGCCGAGAAGCAGGGAGCTGTAGTGGTTGGCGAAACCGCCAAGCGCTGAGCCTGATGGCTGTTTGACCAAGAGCCCCGACTTGTCGGGGCTTTTTGTTATCTG‑CGAGATCTTGAGcc > 2:1188553/1‑150 (MQ=255) ggTCAAGGGCGAGCAGTACTACGCCTCGCTGATGGCCGAGAAGCAGGGAGCTGTAGTGGTTGGCGAAACCGCCAAGCGCTGAGCCTGATGGCTGTTTGACCAAGAGCCCCGACTTGTCGGGGCTTTTTGTTATCTG‑CGAGATCTTGAGcc < 1:1549743/150‑1 (MQ=255) gggCGAGCAGTACTACGCCTCGCTGATGGCCGAGAAGCAGGGAGCTGTAGTGGTTGGCGAAACCGCCAAGCGCTGAGCCTGATGGCTGTTTGACCAAGAGCCCCGACAAGTCGGGGCtcttg > 1:1196659/1‑121 (MQ=255) aaGTACTACGCCTCGCTGATGGCCGAGAAGCAGGGAGCTGTAGTGGTTGGCGAAACCGCCAAGCGCTGAGCCTGATGGCTGTTTGACCAAGAGCCCCGACTTGTCGGGGCTTTTTGTTATCTG‑CGAGATCTTGAGCCGCGCCTACAAAgg < 2:250389/149‑1 (MQ=255) ctacGCCTCGCTGATGGCCGAGAAGCAGGGAGCTGTAGTGGTTGGCGAAACCGCCAAGCGCTGAGCCTGATGGCTGTTTGACCAAGAGCCCCGACTTGTCGGGGCTTTTTGTTATCTG‑CGAGATCTTGAGCCGCGCCTACAAAGGCTcgc > 1:186107/1‑150 (MQ=255) tacTCCTCGCTGATGGCCGAGAAGCAGGGAGCTGTAGTGGTTGGCGAAACCGCCAAGCGCTGAGCCTGATGGCTGTTTGACCAAGAGCCCCGACAAGTCGGGGCtc < 2:1231992/106‑2 (MQ=255) tacGCCTCGCTGATGGCCGAGAAGCAGGGAGCTGTAGTGGTTGGCGAAACCGCCAAGCGCTGAGCCTGATGGCTGTTTGACCAAGAGCCCCGACTTGTCg < 2:510798/100‑1 (MQ=255) tacGCCTCGCTGATGGCCGAGAAGCAGGGAGCTGTAGTGGTTGGCGAAACCGCCAAGCGCTGAGCCTGATGGCTGTTTGACCAAGAGCCCCGACTTGTCg > 1:510798/1‑100 (MQ=255) tacGCCTCGCTGATGGCCGAGAAGCAGGGAGCTGTAGTGGTTGGCGAAACCGCCAAGCGCTGAGCCTGATGGCTGTTTGACCAAGAGCCCCGACTTGTCGGGGCTTTTTGTTATCTG‑CGAGATCTTGAGCCGCGCCTACAAAGGCTcgcg > 1:1458155/1‑150 (MQ=255) acGCCTCGCTGATGGCCGAGAAGCAGGGAGCTGTAGTGGTTGGCGAAACCGCCAAGCGCTGAGCCTGATGGCTGTTTGACCAAGAGCCCCGACTTGTCGGGGCTTTTTGTTATCTG‑CGAGATCTTGAGCCGCGCCTACAAAGGCTCGCGa < 1:2076218/150‑1 (MQ=255) gCCTCGCTGATGGCCGAGAAGCAGGGAGCTGTAGTGGTTGGCGAAACCGCCAAGCGCTGAGCCTGATGGCTGTTTGACCAAGAGCCCCGACTTGTCGGGGCTTTTTGTTATCTG‑CGAGATCTTGAGCCGCGCCTACAAAGGCTCGCGATc < 2:954214/150‑1 (MQ=255) cTCGCTGATGGCCGAGAAGCAGGGAGCTGTAGTGGTTGGCGAAACCGCCAAGCGCTGAGCCTGATGGCTGTTTGACCAAGAGCCCCGACTTGTCGGGGCTTTTTGTTATCTG‑CGAGATCTTGAGCCGCGCCTACAAAGGCTCGCGATCGc < 2:1458155/150‑1 (MQ=255) cTCGCTGATGGCCGAGAAGCAGGGAGCTGTAGTGGTTGGCGAAACCGCCAAGCGCTGAGCCTGATGGCTGTTTGACCAAGAGCCCCGACTTGTCGGGGCTTTTTGTTATCTG‑CGAGATCTTGAGCCGCGCCTACAAAGGCTCGCGATCGc > 2:1636854/1‑150 (MQ=255) cTCGCTGATGGCCGAGAAGCAGGGAGCTGTAGTGGTTGGCGAAACCGCCAAGCGCTGAGCCTGATGGCTGTTTGACCAAGAGCCCCGACTTGTCGGGGCTTTTTGTTATCTG‑CGAGATCTTGAGCCGCGCCTACAAAGGCTCGCGATCGc > 2:2081529/1‑150 (MQ=255) tCGCTGATGGCCGAGAAGCAGGGAGCTGTAGTGGTTGGCGAAACCGCCAAGCGCTGAGCCTGATGGCTGTTTGACCAAGAGCCCCGACTTGTCGGGGCTTTTTGTTATCTG‑CGAGATCTTGAGCCGCGCCTACAAAGGCTCGCGATCGcc > 2:306917/1‑150 (MQ=255) gCTGATGGCCGAGAAGCAGGGAGCTGTAGTGGTTGGCGAACCCGCCAAGCGCTGAGCCTGATGGCTGTTTGACCAAGAGCCCCGACTTGTCGGGGCTTTTTGTTATCTG‑CGAGATCTTGAGCCGCGCCTACAAAGGCTCGCGATCGCCAg < 2:2027904/150‑1 (MQ=255) tGATGGCCGAGAAGCAGGGAGCTGTACTGGTTGGCGAAACCGCCAAGCGCTGAGCCTGATGGCTGTTTGACCAAGAGCCCCGACTTGTCGGGGCTTTTTGTTATCTG‑CGAGATCTTGAGCCGCGCCTACAAAGGCTCGCGATCGCCAGTc < 1:220346/150‑1 (MQ=255) gATGGCCGAGAAGCAGGGAGCTGTAGTGGTTGGCGAAACCGCCAAGCGCTGAGCCTGATGGCTGTTTGACCAAGAGCCCCGACTTGTCGGGGCTTTTTGTTATCTG‑CGAGATCTTGAGCCGCGCCTACAAAGGCTCGCGATCGCCAGTca > 1:1764109/1‑150 (MQ=255) aTGGCCGAGAAGCAGGGAGCTGTAGTGGTTGGCGAAACCGCCAAGCGCTGAGCCTGATGGCTGTTTGACCAAGAGCCCCGACTTGTCGGGGCTTTTTGTTATCTG‑CGAGATCTTGAGCCGCGCCTACAAAGGCt > 2:122020/1‑134 (MQ=255) aTGGCCGAGAAGCAGGGAGCTGTAGTGGTTGGCGAAACCGCCAAGCGCTGAGCCTGATGGCTGTTTGACCAAGAGCCCCGACTTGTCGGGGCTTTTTGTTATCTG‑CGAGATCTTGAGCCGCGCCTACAAAGGCt < 1:122020/134‑1 (MQ=255) tGGCCGAGAAGCAGGGAGCTGTAGTGGTTGGCGAAACCGCCAAGCGCTGAGCCTGATGGCTGTTTGACCAAGAGCCCCGACTTGTCGGGGCTTTTTGTTATCTG‑CGAGATCTTGAGCCGCGCCTACAAAGGCTCGCGATCGCCAGTcaca < 2:1799473/150‑1 (MQ=255) gagaAGCAGGGAGCTGTAGTGGTTGGCGAAACCGCCAAGCGCTGAGCCTGATGGCTGTTTGACCAAGAGCCCCGACTTGTCGGGGCTTTTTGtt < 2:1681313/94‑1 (MQ=255) gagaAGCAGGGAGCTGTAGTGGTTGGCGAAACCGCCAAGCGCTGAGCCTGATGGCTGTTTGACCAAGAGCCCCGACTTGTCGGGGCTTTTTGtt > 1:1681313/1‑94 (MQ=255) gagaAGCAGGGAGCTGTAGTGGTTGGCGAAACCGCCAAGCGCTGAGCCTGATGGCTGTTTGACCAAGAGCCCCGACTTGTCGGGGCTTTTTGTTATCTG‑CGAGATCTTGAGCCGCGCCTACAAAGGCTCGCGATCGCCAGTCACAGGCTg < 1:2081529/150‑1 (MQ=255) agaAGCAGGGAGCTGTAGTGGTTGGCGAAACCGCCAAGCGCTGAGCCTGATGGCTGTTTGACCAAGAGCCCCGACTTGTCGGGGCTTTTTGTTATCTG‑CGAGATCTTGAGCCGCGCCTACAAAGGCTCGCGATCGCCAGTCACAGGCTGc < 1:306917/150‑1 (MQ=255) gaAGCAGGGAGCTGTAGTGGTTGGCGAAACCGCCAAGCGCTGAGCCTGATGGCTGTTTGACCAAGAGCCCCGACTTGTCGGGGCTTTTTGTTATCTG‑CAAGATCTTGAGCCGCGCCTACAAAGGCTCGCGATCGCCAGTCACAGGCTGCg > 2:1761920/1‑150 (MQ=255) aaGCAGGGAGCTGTAGTGGTTGGCGAAACCGCCAAGCGCTGAGCCTGATGGCTGTTTGACCAAGAGCCCCGACTTGTCGGGGCTTTTTGTTATCTG‑CGAGATCTTGAGCCGCGCCTACAAAGGCTCGCGATCGc > 2:2122235/1‑134 (MQ=255) aaGCAGGGAGCTGTAGTGGTTGGCGAAACCGCCAAGCGCTGAGCCTGATGGCTGTTTGACCAAGAGCCCCGACTTGTCGGGGCTTTTTGTTATCTG‑CGAGATCTTGAGCCGCGCCTACAAAGGCTCGCGATCGc < 1:2122235/134‑1 (MQ=255) ggAGCTGTAGTGGTTGGCGAAACCGCCAAGCGCTGAGCCTGATGGCTGTTTGACCAAGAGCCCCGACTTGTCGGGGCTTTTTGTTATCTG‑CGAGATCTTGAGCCGCGCCTACAAAGGCTCGCGATCGCCAGTCACAGGCTGCGATACGCt > 1:1299399/1‑150 (MQ=255) tGTAGTGGTTGGCGAAACCGCCAAGCGCTGAGCCTGATGGCTGTTTGACCAAGAGCCCCGACTTGTCGGGGCTTTTTGTTATCTG‑CGAGATCTTGAGCCGCGCCTACAAAGGCTCGCGATCGCCAGTCACAGGCTGCGATACGCtattat > 2:2131383/1‑150 (MQ=255) tAGTGGTTGGCGAAACCGCCAAGCGCTGAGCCTGATGGCTGTTTGACCAAGAGCCCCGACTTGTCGGGGCTTTTTGTTATCTG‑CGAGATCTTGAGCCGCGCCTACAAAGGCTCGCGATc < 2:2383372/119‑1 (MQ=255) gTGGTTGGCGAAACCGTCAAGCGCTGAGCCTGATGGCTGTTTGACCAAGAGCCCCGACTTGTCGGGGCTTTTTGTTATCTG‑CGAGATCTTGAGCCGCGCCTACAAAGGCTCGCGATCGCCGGTCACAGGCTGCGATACGCTATTATTCgg < 1:238696/150‑1 (MQ=255) gTGGTTGGCGAAACCGCCAAGCGCTGAGCCTGATGGCTGTTTGACCAAGAGCCCCGACTTGTCGGGGCTTTTTGTTATCTG‑CGAGATCTTGAGCCGCGCCTACAAAGGCTCGCGATCGCCAGTCACAGGCTGCGATACGCTATTATTCgg < 2:186107/150‑1 (MQ=255) tGGTTGGCGAAACCGCCAAGCGATGAGCCTGATGGCTGTTTGACCAAGAGCCCCGACTTGTCGGGGCTTTTTGTTATCTG‑CGAGATCTTGAGCCGCGCCTACAAAGGCTCGCGATCGCCAGTCACAGGCTGCGATACGCTATTATTCggg < 2:51535/150‑1 (MQ=255) gAAACCGCCAAGCGCTGAGCCTGATGGCTGTTTGACCAAGAGCCCCGACTTGTCGGGGCTTTTTGTTATCTG‑CGAGATCTTGAGCCGCGCCTACAAAGGCTCGCGATCGCCAGTCACAGGCTGCGATACGCTATTATTCGGGCACTTTTc > 2:102523/1‑150 (MQ=255) aaCCGCCAAGCGCTGAGCCTGATGGCTGTTTGACCAAGAGCCCCGACTTGTCGGGGCTTTTTGTTATCTG‑CGAGATCTTGAGCCGCGCCTACAAAGGCTCGCGATCGCCAGTCACAGGCTGCGATACGCTATTATTCGGGCACTTTTCAg < 1:1207948/150‑1 (MQ=255) aCCGCCAAGCGCTGAGCCTGTTGGCTGTTTGACCAAGAGCCCCGACTTGTCGGGGCTTTTTGTTATCTG‑CGAGATCTTGAGCCGCGCCTACAAAGGCTCGCGATCGCCAGTCACAGGCTGCGATACGCTATTATTCGGGCACTTTTCAgg < 2:37270/150‑1 (MQ=255) cGCCAAGCGCTGAGCCTGATGGCTGTTTGACCAAGAGCCCCGACTTGTCGGGGCTTTTTGTTATCTG‑CGAGATCTTGAGCCGCGCCTa < 1:112951/88‑1 (MQ=255) cGCCAAGCGCTGAGCCTGATGGCTGTTTGACCAAGAGCCCCGACTTGTCGGGGCTTTTTGTTATCTG‑CGAGATCTTGAGCCGCGCCTa > 2:112951/1‑88 (MQ=255) ccAAGCGCTGAGCCTGATGGCTGTTTGACCAAGAGCCCCGACTTGTCGGGGCTTTTTGTTATCTG‑CGAGATCTTGAGCCGCGCCTACAAAGGCTCGCGATCGCCAGTCACAGGCTGCGATACGCTATTATTCGGGCACTTTTCAGGGGGa < 1:2131383/150‑1 (MQ=255) cAAGCGCTGAGCCTGATGGCTGTTTGACCAAGAGCCCCGACTTGTCGGGGCTTTTTGTTATCTG‑CGAGATCTTGAGCCGCGCCTACAAAGGCTCGCGATCGCCAGTCACAGGCTGCGATACGCTATTATTCGGGCACTTTTCAgggg > 1:231266/1‑147 (MQ=255) cAAGCGCTGAGCCTGATGGCTGTTTGACCAAGAGCCCCGACTTGTCGGGGCTTTTTGTTATCTG‑CGAGATCTTGAGCCGCGCCTACAAAGGCTCGCGATCGCCAGTCACAGGCTGCGATACGCTATTATTCGGGCACTTTTCAGGGGGaa < 2:1764109/150‑1 (MQ=255) cAAGCGCTGAGCCTGATCGCTGTTTGCCCATGATCCCCGACTTGTCGCCGCTTTTTGTTAACTGAAGAAAGCGT‑TGCCGCGCCTACAAAGGCTCGCGATCGCCAGTCACAGGCTGCGATACGCTATTATTCGGGCACTTTTCAGGGGGaa < 1:43670/150‑1 (MQ=255) gcTGAGCCTGATGGCTGTTTGACCAAGAGCCCCGACTTGTCGGGGCTTTTTGTTATCTG‑CGAGATCTTGAGCCGCGCCTACAAAGGCTCGCGATCGCCAGTCACAGGCTGCGATACGCTATTATTCGGGCACTTTTCAGGGGGAACATAc < 1:204172/150‑1 (MQ=255) cTGAGCCTGATGGCTGTTTGACCAAGAGCCCCGACTTGTCGGGGCTTTTTGTTATCTG‑CGAGATCTTGAGCCGCGCCTACCCAGGGTGTAGATCGCCAGTCACAGGCTGCGATACGCTATTATTCGGGCACTTTTCAGGGGGAACATACg > 1:2349794/1‑150 (MQ=255) ccTGATGGCTGTTTGACCAAGAGCCCCGACTTGTCGGGGCTTTTTGTTATCTG‑CGAGATCTTGAGCCGCGCCTACAAAGGCTCGCGATCGCCAGTCACAGGCTGCGATACGCTATTATTCGGGCACTTTTCAggggg > 2:280485/1‑137 (MQ=255) ccTGATGGCTGTTTGACCAAGAGCCCCGACTTGTCGGGGCTTTTTGTTATCTG‑CGAGATCTTGAGCCGCGCCTACAAAGGCTCGCGATCGCCAGTCACAGGCTGCGATACGCTATTATTCGGGCACTTTTCAggggg < 1:280485/137‑1 (MQ=255) tGATGGCTGTTTGACCAAGAGCCCCGACAAGTCGGGGCtct > 2:1361209/1‑39 (MQ=18) tGATGGCTGTTTGACCAAGAGCCCCGACAAGTCGGGGCtct < 1:1361209/41‑3 (MQ=18) gATGGCTGTTTGACCAAGAGCCCCGACTTGTCGGGGCTTTTTGTTATCTG‑CGAGATCTTGAGCCGCGCCTACAAAGGCTCGCGATCGCCAGTcaca < 2:1902528/96‑1 (MQ=255) gATGGCTGTTTGACCAAGAGCCCCGACTTGTCGGGGCTTTTTGTTATCTG‑CGAGATCTTGAGCCGCGCCTACAAAGGCTCGCGATCGCCAGTcaca > 1:1902528/1‑96 (MQ=255) aTGGCTGTTTGACCAAGAGCCCCGACTTGTCGGGGCTTTTTGTTATCTG‑CGAGATCTTGAGCCGCGCCTACAAAGGCTCGCGATCGCCAGTCACAGGCTGCGATACGCTATTATTCGGGCACTTTTCAGGGCGAACATACGGATGCTCaa > 2:2312451/1‑150 (MQ=255) aTGGCTGTTTGACCAAGAGCCCCGACTTGTCGGGGCTTTTTGTTATCTC‑ACTGATCTTGAGCCGCGCCTACAAAGGCTCGCGATCGCCAGTCACAGGTTGCGATACGCTATTATTCGGGCACTTTTCAGGGGGAACATACGGATGCTCaa > 1:2243987/1‑150 (MQ=255) tGGCTGTTTGACCAAGAGCCCCGACTTGTCGGGGCTTTTTGTTATCTG‑CGAGATCTTGAGCCGCGCCTACAAAGGCTCGCGATCGCCAGTCACAGGCTGCGATACGCTATTATTCGGGCACTTTTCAGGGGGaa < 1:1031274/134‑1 (MQ=255) tGGCTGTTTGACCAAGAGCCCCGACTTGTCGGGGCTTTTTGTTATCTG‑CGAGATCTTGAGCCGCGCCTACAAAGGCTCGCGATCGCCAGTCACAGGCTGCGATACGCTATTATTCGGGCACTTTTCAGGGGGaa > 2:1031274/1‑134 (MQ=255) ggCTGTTTGACCAAGAGCCCCGACTTGTCGGGGCTTTTTGTTATCTG‑CGAGATCTTGAGCCGCGCCTACAAAGGCTCGCGATCGCCAGTCACAGGCTGCGATACGCTATTATTCGGGCACTTTTCAGGGGGAACATACGGATGCTCAACg < 1:102523/150‑1 (MQ=255) gCTGTTTGACCAAGAGCCCCGACTTGTCGGGGCTTTTTGTTATCTG‑CGAGATCTTGAGCCGCGCCTACAAAGGCTCGCGATCGCCAGTCACAGGCTGCGATACGCTattatt > 2:1259180/1‑112 (MQ=255) gCTGTTTGACCAAGAGCCCCGACTTGTCGGGGCTTTTTGTTATCTG‑CGAGATCTTGAGCCGCGCCTACAAAGGCTCGCGATCGCCAGTCACAGGCTGCGATACGCTattatt < 1:1259180/112‑1 (MQ=255) tttGACCAAGAGCCCCGACTTGTCGGGGCTTTTTGTTATCTG‑CGAGATCTTGAGCCGCGCCTACAAAGGCTCGCGATCGCCAGTCACAGGCTGCGATACGCTATTATTCGGGCACTTTTCAGGGGGAACATACGGATGCTCAACGGCCtt < 1:1701670/150‑1 (MQ=255) aCCAAGAGCCCCGACTTGTCGGGGCTTTTTGTTATCTG‑CGAGATCTTGAGCCGCGCCTACAAAGGCTCGCGATCGCCAGTCACAGGCTGCGATACGCTATTATTCGGGCACTTTTCAGGGGGAACATACGGATGCTCAACGGCCTTTGGc > 1:1475293/1‑150 (MQ=255) cAAGAGCCCCGACTTGTCGGGGCTTTTTGTTATCTG‑CGAGATCTTGAGCCGCGCCTACAAAGGCTCGCGATCGCCAGTCACAGGCTGCGATACGCTATTATTCGGGCACTTTTCAGGGGGAACATACGGATGCTCAACGGCCTTTGGCTc < 2:888849/150‑1 (MQ=255) aaaaagCCCCGACAAGTCGGGGCTTTTTGTTATCTG‑CGAGATCTTGAGCCGCGCCTACAAAGGCTCGCGATCGCCAGTCACAGGCTGCGATACGCTATTATTCGGGCACTTTTCAGGGGGAACATACGGATGCTCAACGGCCTTTg > 1:492640/5‑146 (MQ=255) aaaaagCCCCGACAAGTCGGGGCTTTTTGTTATCTG‑CGAGATCTTGAGCCGCGCCTACAAAGGCTCGCGATCGCCAGTCACAGGCTGCGATACGCTATTATTCGGGCACTTTTCAGGGGGAACATACGGATGCTCAACGGCCTTTg < 2:492640/142‑1 (MQ=255) aaGAGCCCCGACTTGTCGGGGCTTTTTGTTATCTG‑CGAGATCTTGAGCCGCGCCTACAAAGGCTCGCGATCGCCAGTCACAGGCTGCGATACGCTATTATTCgg > 2:2096707/1‑104 (MQ=255) agCCCCGACAAGTCGGGGCTTTTTGTTATCTG‑CGAGATCTTGAGCCGCGCCTAc > 1:1939719/1‑54 (MQ=38) agCCCCGACAAGTCGGGGCTTTTTGTTATCTG‑CGAGATCTTGAGCCGCGCCTAc < 2:1939719/54‑1 (MQ=37) gCCCCGACAAGTCGGGGCTTTTTGTTATCTG‑CGAGATCTTGAGCCGCGCCTACAAAGGCTCGCGATCGCCAGTCACAGGCTGCGATACGCTATTATTCGGGCACTTTTCAGGGGGAACATACGGATGCTCAACGGCCTTTGGCTCGGCtt > 2:688990/1‑150 (MQ=255) gCCCCGACAAGTCGGGGCTTTTTGTTATCTG‑CGAGATCTTGAGCCGCGCCTACAAAGGCTCGCGATCGCCAGTCACAGGCTGCGATACGCTATTATTCGGGCACTTTTCAGGGGGAACATACGGATGCTCAACGGCCTTTGGCTCGGCtt > 1:1246594/1‑150 (MQ=255) ccccGACTTGTCGGGGCTTTTTGTTATCTG‑CGAGATCTTGAGCCGCGCCTACAAAGGCTCGCGATCGCCAGTCACAGGCTGCGATACGCTATTATTCGGGCACTTTTCAGGGGGAACATACGGATGCTCAACGGCCTTTGGCTCGGCttt < 1:502911/150‑1 (MQ=255) ccccGACAAGTCGGGGCTCTTTGTTATCTG‑CGAGATCTTGAGCCGCGCCTACAAAg > 1:1485307/1‑56 (MQ=25) ccccGACAAGTCGGGGCTCTTTGTTATCTG‑CGAGATCTTGAGCCGCGCCTACAAAg < 2:1485307/56‑1 (MQ=25) cGACTTGTCGGGGCTTTTTGTTATCTG‑CGAGATCTTGAGCCGCGGCTACAAAGGCTCGCGATCGCCAGTCACATGCTGCGATACGCTATTATTCGGGCACTTTTCAGGGGGAACATACGGATGCTCAACGGCCTTTGGCTCGGCTTTTTc > 1:1160285/1‑150 (MQ=255) cGACTTGTCGGGGCTTTTTGTTATCTG‑CGAGATCTTGAGCCGCGCCTACAAAGGCTCGCGATCGCCAGTCACAGGCTGCGATACGCTATTATTCGGGCACTTTTCAGGGGGAACATACGGATGCTCAACGGCCTTTGGCTCGGCTTTTTc < 2:1475293/150‑1 (MQ=255) cGACTTGTCGGGGCTTTTTGTTATCTG‑CGAGATCTTGAGCCGCGCCTACAAAGGCTCGCGATCGCCAGTCACAGGCTGCGATACGCTATTATTCGGGCACTTTTCAGGGGGAACATACGGATGCTCAACGGCCTTTGGCTCGGCTTTTTc > 2:1806205/1‑150 (MQ=255) gACTTGTCGGGGCTTTTTGTTATCTG‑CGAGATCTTGAGCCGCGCCTACAAAGGCTCGCGATCGCCAGTCACAGGCTGCGATACGCTATTATTCGGGCACTTTTCAGGGGGAACATACGGATGCTCAACGGCCTTTGGCTCGGCTTTTTcc > 1:2355211/1‑150 (MQ=255) aCTTGTCTGGTCTTTTTGTTATCTG‑CGAGATCTTGAGCCTCGCCTACAAAGGCTCGCGATCGCCAGTCACAGGCTGCGATACGCTATTATTCGGGCACTTTTCAGGGGGAACATACGGATGCTCAACGGCCTTTGGCTCGGCTTTTTCCt < 2:812155/150‑1 (MQ=255) aCTTGTCGGGGCTTTTTGTTATCTG‑CGAGATCTTGAGCCGCGCCTACAAAGGCTCGCGATCGCCAGTCACAGGCTGCGATACGCTATTATTCGGGCACTTTTCAGGGGGAACATACGGATGCTCAACGGCCTTTGGCTCGGCTTTTTCCt < 2:2355211/150‑1 (MQ=255) ttGTCGGGGCTTTTTGTTATCTG‑CGAGATCTTGAGCCGCGCCTACAAAGGCTCGCGATCGCCAGTCACAGGCTGCGATACGCTATTATTCGGGCACTTTTCAGGGGGAACATACGGATGCTCAACGGCCTTTGGCTCGGCTTTTTCCtgg > 2:492868/1‑150 (MQ=255) | TCATTGCTCGCTGGGAAGGCATGTACGACGCGGTCAAGGGCGAGCAGTACTACGCCTCGCTGATGGCCGAGAAGCAGGGAGCTGTAGTGGTTGGCGAAACCGCCAAGCGCTGAGCCTGATGGCTGTTTGACCAAGAGCCCCGACTTGTCGGGGCTTTTTGTTATCTG‑CGAGATCTTGAGCCGCGCCTACAAAGGCTCGCGATCGCCAGTCACAGGCTGCGATACGCTATTATTCGGGCACTTTTCAGGGGGAACATACGGATGCTCAACGGCCTTTGGCTCGGCTTTTTCCTGG > NC_002947/145983‑146276 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |