| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,189,042 | C→T | 6.7% | intergenic (+26/+16) | PP_1038 → / ← tatC‑I | hypothetical protein/Sec‑independent protein translocase protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,189,042 | 0 | C | T | 6.7% | 260.9 / 5.8 | 89 | intergenic (+26/+16) | PP_1038/tatC‑I | hypothetical protein/Sec‑independent protein translocase protein |
| Reads supporting (aligned to +/- strand): ref base C (42/41); new base T (4/2); total (46/43) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.78e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.58e-01 | |||||||||||
GAAGAGTGGAAGGTGGAGCTGGTGGTGGCTGACGAGCTGATTGTGCAGGTCGTCGCTGCGCTCAAGCAGAGCCACCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCCACAAGCCAGCAACCCCATCTCGAACAGCACCCACATCGGCACTGCCAGCATCGTCTGCGAAAACACATCCGGCGGTGTCAGGA > NC_002947/1188894‑1189191 | gAAGAGTGGAAGGTGGAGCTGGTGGTGGCTGACGAGCTGATTGTGCAGGTCGTCGCTGCGCTCAAGCAGAGCCACCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCAc > 2:1357919/1‑149 (MQ=255)gAAGAGTGGAAGGTGGAGCTGGTGGTGGCTGACGAGCTGATTGTGCAGGTCGTCGCTGCGCTCAAGCAGAGCCACCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCAc < 1:1357919/149‑1 (MQ=255) gagTGGAAGGTGGAGCTGGTGGTGGCTGACGAGCTGATTGTGCAGGTCGTCGCTGCGCTCAAGCAGAGCCACCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGccc > 2:435297/1‑150 (MQ=255) gAAGGTGGAGCTGGTGGTGGCTGACGAGCTGATTGTGCAGGTCGTCGCTGCGCTCAAGCAGAGCCACCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCGTGCCCGCGaa < 2:2385338/150‑1 (MQ=255) gAAGGTGGAGCTGGTGGTGGCTGACGAGCTGATTGTGCAGGTCGTCGCTGCGCTCAAGCAGAGCCACCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGaa > 1:1036641/1‑150 (MQ=255) tGGAGCTGGTGGTGGCTGACGAGCTGATTGTGCAGGTCGTCGCTGCGCTCAAGCAGAGCCACCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGc < 1:465691/150‑1 (MQ=255) tGGAGCTGGTGGTGGCTGACGAGCTGATTGTGCAGGTCGTCGCTGCGCTCAAGCAGAGCCACCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGc < 1:906996/150‑1 (MQ=255) gCTGGTGGTGGCTGACGAGCTGATTGTGCAGGTCGTCGCTGCGCTCAAGCAGAGCCACCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTa < 2:614527/150‑1 (MQ=255) tggtggtggCTGACGAGCTGATTGTGCAGGTCGTCGCTGCGCTCAAGCAGAGCCACCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGcc > 1:359754/1‑145 (MQ=255) tggtggtggCTGACGAGCTGATTGTGCAGGTCGTCGCTGCGCTCAAGCAGAGCCACCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGcc < 2:359754/145‑1 (MQ=255) tggtggtggCTGACGAGCTGATTGTGCAGGTCGTCGCTGCGCTCAAGCAGAGCCACCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACa > 1:732537/1‑150 (MQ=255) gtggCTGACGAGCTGATTGTGCAGGTCGTCGCTGCGCTCAAGCAGAGCCACCCGTACGAGACGCCAGCCTCTGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCTGGCACGCCCGCGAAAGGGCCCTACAATCCa < 1:1999585/150‑1 (MQ=255) gtggCTGACGAGCTGATTGTGCAGGTCGTCGCTGCGCTCAAGCAGAGCCACCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCa < 2:223838/150‑1 (MQ=255) gCTGACGAGCTGATTGTGCAGGTCGTCGCTGCGCTCAAGCAGAGCCACCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGACCGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGcc < 1:1502382/150‑1 (MQ=255) tGACGAGCTGATTGTGCAGGTCGTCGCTGCGCTCAAGCAGAGCCACCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCcac > 2:919350/1‑150 (MQ=255) tGATTGTGCAGGTCGTCGCTGCGCTCAAGCAGAGCCACCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCt > 1:1474858/1‑150 (MQ=255) gATTGTGCAGGTCGTCGCTGCGCTCAAGCAGAGCCACCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCtt > 2:2269070/1‑150 (MQ=255) ttGTGCAGGTCGTCGCTGCGCTCAAGCAGAGCCACCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGc > 2:1403216/1‑123 (MQ=255) ttGTGCAGGTCGTCGCTGCGCTCAAGCAGAGCCACCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGc < 1:1403216/123‑1 (MQ=255) gtgCAGGTCGTCGCTGCGCTCAAGCAGAGCCACCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCt < 2:1474858/150‑1 (MQ=255) gCAGGTCGTCGCTGCGCTCAAGCAGAGCCACCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGcc < 2:138823/120‑1 (MQ=255) gCAGGTCGTCGCTGCGCTCAAGCAGAGCCACCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGcc > 1:138823/1‑120 (MQ=255) gCAGGTCGTCGCTGCGCTCAAGCAGAGCCACCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTgg < 1:919350/150‑1 (MQ=255) ctggTCGTCGCTGCGCGAAAGCAGGGCCACCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCGCGCCGAGTTCCAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGc < 2:1497462/148‑1 (MQ=255) gtcgtcGCTGCGCTCAAGCAGAGCCACCCTTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTcc > 1:2060632/1‑150 (MQ=255) cgtcgCTGCGCTCAAGCAGAGCCACCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATc > 1:1658221/1‑122 (MQ=255) cgtcgCTGCGCTCAAGCAGAGCCACCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATc < 2:1658221/122‑1 (MQ=255) gCTGCGCTCAAGCAGAGCCACCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGc < 2:2382395/150‑1 (MQ=255) tGCGCTCAAGCAGAGCCACCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCtt > 1:1711783/1‑150 (MQ=255) gcgcTCAAGCAGAGCCACCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCCTc < 1:2402326/150‑1 (MQ=255) gcTCAAGCAGAGCCACCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCtt > 1:177003/1‑129 (MQ=255) gcTCAAGCAGAGCCACCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCtt < 2:177003/129‑1 (MQ=255) tCAAGCAGAGCCACCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACa > 2:1756554/1‑150 (MQ=255) aaGCAGAGCCACCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGaaa > 2:1055183/1‑96 (MQ=255) aaGCAGAGCCACCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGaaa < 1:1055183/96‑1 (MQ=255) aaGCAGAGCCACCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACAtt > 2:650163/1‑150 (MQ=255) cAGAGCCACCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCca < 2:1564459/150‑1 (MQ=255) agCCACCCGTACGAGACGCCAGCCTATGACGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCCTGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCCACaa < 1:770367/150‑1 (MQ=255) agCCACCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCcaaag < 1:2269070/150‑4 (MQ=255) cACCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCCACAAGcc > 1:1757784/1‑150 (MQ=255) aCCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCCACAAGCCa > 2:26312/1‑150 (MQ=255) ccGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGc > 2:2226128/1‑88 (MQ=255) ccGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGc < 1:2226128/88‑1 (MQ=255) ccGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCaa < 2:2140924/134‑1 (MQ=255) ccGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCaa > 1:2140924/1‑134 (MQ=255) gTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACa < 2:1244995/134‑1 (MQ=255) gTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACa > 1:1244995/1‑134 (MQ=255) gCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCCACAAGCCAGCAACCCCAtctc > 2:1810041/1‑150 (MQ=255) aGCCTATGAATTCTGACGGCTCGCCGACTTCTAGAACGCATCACGACTATTCGCGGGCACGCCCGCGAAAGGGCCCTACATTCCAGCAACAATCACCTTGCCTGGCTCCTGCCGCTTCAACATTCCACAAGCCAGCAACCCCATCTCGaa < 1:553972/150‑1 (MQ=255) aGCCTATGAAGTCTGGCGGCTCGTTAAGTGCTAGAACGCATCACGTCTATGCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCCACAAGCCAGCAACCCCATCTCGaa > 1:1261321/1‑150 (MQ=255) aGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGTGGGCGTGCCCGCGaa > 2:2312914/1‑69 (MQ=255) aGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGTGGGCGTGCCCGCGaa < 1:2312914/69‑1 (MQ=255) tATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCCACAAGCCAGCAACCCCATCTCGAACAGc > 2:1228322/1‑150 (MQ=255) tGAAGTCTGGCGGCTAGCCGAGTGCGAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCCACAAGCCAGCAACCCCATCTCGAACAGCAc < 2:1757784/150‑1 (MQ=255) aaGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCCACAAGCCAGCAACCCCATCTCGAACAGCAccc > 1:1506614/1‑150 (MQ=255) aGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCCACaa < 2:1556533/121‑1 (MQ=255) aGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCCACaa > 1:1556533/1‑121 (MQ=255) gTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGAGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCCACAAGCCAGCAACCCCATCTCGAACAGCACCcac > 1:1111121/1‑150 (MQ=255) gcggcTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCCACAAGCCAGCAACCCCATCTCGAACAGCACCCACATCgg > 1:1447132/1‑150 (MQ=255) cggcTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCCACAAGCCAGCAACCCCATCTCGAACAGCACCCACATCGGc < 1:650163/150‑1 (MQ=255) ggcTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTc > 2:603935/1‑108 (MQ=255) ggcTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTc < 1:603935/108‑1 (MQ=255) ggcTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCCACAAGCCAGCAACCCCATCTCGAACAGCACCCACATCGGCa > 2:786824/1‑150 (MQ=255) tCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCCACAAGCCAGCAACCCCATCTCGAACa > 2:1188656/1‑132 (MQ=255) tCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCCACAAGCCAGCAACCCCATCTCGAACa < 1:1188656/132‑1 (MQ=255) gCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCCACAAGCCAGCAACCCCATCTCGAACAGCACCCACATCGGCACTGc < 1:2057047/149‑1 (MQ=255) gCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCCACAAGCCAGCAACCCCATCTCGAACAGCACCCACATCGGCACTGc > 2:2057047/1‑149 (MQ=255) ccGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCCACAAGCCAGCAACCCCATCTCGAACAGCACCCACATCGGCACTGCCa < 2:2060632/150‑1 (MQ=255) gAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCCACAAGCCAGCAACCCCATCTCGAACAGCACCCACATCGGCACTGCCAGc < 2:1447132/150‑1 (MQ=255) ttCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCCACAAGCCAGCAAcc < 1:1697648/112‑1 (MQ=255) ttCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCCACAAGCCAGCAAca > 2:1697648/1‑111 (MQ=255) ttCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGAGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCCACAAGCCAGCAACCCCATCTCGAACAGCACCCACATCGGCACTGCCAGCATc < 2:1111121/150‑1 (MQ=255) tAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCCACAAGCAAGCAACCCCATCTCGAACAGCACCCACATCGGCACTGCCAGCATCGTc > 1:1819050/1‑150 (MQ=255) aaCGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCCACAAGCCAGCAACCCCATCTCGAACAGCACCCACATc < 1:577849/129‑1 (MQ=255) aaCGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCCACAAGCCAGCAACCCCATCTCGAACAGCACCCACATc > 2:577849/1‑129 (MQ=255) aCGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCCACAAGCCAGCAACCCCATCTCGAACAGCACCCACATCGGCACTGCCAGCATCGTCTGCg > 2:2294400/1‑150 (MQ=255) cGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCCACAAGCCAg < 2:958338/99‑1 (MQ=255) cGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCCACAAGCCAg > 1:958338/1‑99 (MQ=255) aTCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCCACAAGCCAGCAACCCCATCTCGAACAGCACCCACATCGGCACTGCCAGCATCGTCTGCGaaaa < 1:435297/150‑1 (MQ=255) aTCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCCACAAGCCAGCAACCCCATCTCGAACAGCACCCACATCGGCACTGCCAGCATCGTCTGCGaaaa > 1:1257998/1‑150 (MQ=255) tCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAGTCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCCACAAGCCAGCAACCCCATCTCGAACAGCACCCACATCGGCACTGCCAGCATCGTCTGCGAAAac > 1:556357/1‑150 (MQ=255) tCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCCACAAGCCAGCAACCCCATCTCGAACAGCACCCACATCGGCACTGCCAGCATCGTCTGCGAAAac < 2:1711783/150‑1 (MQ=255) aCGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCCACAAGCCAGCAACCCCATCTCGAACAGCACCCACATCGGCACTGCTAg < 1:2407545/132‑1 (MQ=255) aCGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCCACAAGCCAGCAACCCCATCTCGAACAGCACCCACATCGGCACTGCCAg > 2:2407545/1‑132 (MQ=255) aCGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCCACAAGCCAGCAACCCCATCTCGAACAGCACCCACATCGGCACTGCCAGCATCGTCTGCGAAAacac > 2:1358144/1‑150 (MQ=255) cctttCGCGGGCGTGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCCACAAGCCAGCAACCCCATCTCGAACAGCACCCACATCGGCACTGCCAGCATCGTCTGCGAAAACACATcc > 2:317048/4‑150 (MQ=255) cTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCGCAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCCACAAGCCAGCAACCCCATATCGAACAGCACCCACATCGGCACTGCCAGCATCCTCTGCGAAAACACATcc > 1:28665/1‑150 (MQ=255) tttCGCGGGCGTGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCCACAAGCCAGCAACCCCATCTCGAACAGCACCCACATCGGCACTGCCAGCATCGTCTGCGAAAACACATCcgg > 2:2051980/2‑150 (MQ=255) tttCGCGGGCGTGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGATTAAATATTCCACAAGCCAGCAACCCCATCTCGAACAGCACCCACATCGGCACTGCCAGCATCGTCTGCGAAAACACATCcgg > 1:1145029/2‑150 (MQ=255) aTTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCCACAAGCCAGCACCCCCATCTCGAACAGCACCCACATCGGCACTGCCAGCATCGTCTGCGAAAACACATCcgg < 2:1036641/150‑1 (MQ=255) tCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCCACAAGCCAGCAACCCCATCTCGAACAGCACCCACATCGGCACTGCCAGCATCGTCTGCGAAAACACATCcggcc < 1:1756554/150‑2 (MQ=255) cGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCCACAAGCCAGCAACCCCATCTCGAACAGCACCCACATCGGCACTGCCAGCATCGTCTGCGAAAACACATCCGGCGGTGTCAGGa < 1:1228322/150‑1 (MQ=255) | GAAGAGTGGAAGGTGGAGCTGGTGGTGGCTGACGAGCTGATTGTGCAGGTCGTCGCTGCGCTCAAGCAGAGCCACCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCCACAAGCCAGCAACCCCATCTCGAACAGCACCCACATCGGCACTGCCAGCATCGTCTGCGAAAACACATCCGGCGGTGTCAGGA > NC_002947/1188894‑1189191 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |