Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 1,193,934 T→A 9.6% L23M (TTG→ATG) ‡ uxpA → lipoprotein UxpA

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029471,193,9340TA 9.6% 255.4 / 14.0 83L23M (TTG→ATG) ‡uxpAlipoprotein UxpA
Reads supporting (aligned to +/- strand):  ref base T (45/30);  new base A (6/2);  total (51/32)
Fisher's exact test for biased strand distribution p-value = 4.77e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.77e-01

ATTGGAATTGCTGTCGGATTTCTGCCATCAAACTGTAATGCCAACGCCGCAACATCCGGGTCCCTGAATGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGATGCCCGCCAGCCTGGCCAGGCGGTGGTACCGGCTACCCGGTTGGGGCCGGTCAGCCA  >  NC_002947/1193785‑1194082
                                                                                                                                                     |                                                                                                                                                      
aTTGGAATTGCTGTCGGATTTCTGCCATCAAACTGTAATGCCAACGCCGCAACATCCGGGTCCCTGAATGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGTGCCt                                                                                                                                                        >  2:544499/1‑150 (MQ=255)
             tCGGATTTCTGCCATCAAACTGTAATGCCAACGCCGCAACATCCGGGTCCCTGAATGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGCACCgctgct                                                                                                                                          >  2:221803/1‑150 (MQ=255)
              cGGATTTCTGCCATCAAACTGTAATGCCAACGCCGCAACATCCGGGTCCCTGAATGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGCACCGCTGCTc                                                                                                                                         <  1:1938046/150‑1 (MQ=255)
               ggATTTCTGCCATCAAACTGTAATGCCAACGCCGCAACATCCGGGTCCCTGAATGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGCACCGCTGCTCg                                                                                                                                        >  2:306022/1‑150 (MQ=255)
                  tttCTGCCATCAAACTGTAATGCCAACGCCGCAACATCCGGGTCCCTGAATGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGCACCGCTGCTCGgcg                                                                                                                                     >  1:1828154/1‑150 (MQ=255)
                  tttCTGCCATCAAACTGTAATGCCAACGCCGCAACATCCGGGTCCCTGAATGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGCACCGCTGCTCGgcg                                                                                                                                     >  1:155859/1‑150 (MQ=255)
                      tGCCATCAAACTGTAATGCCAACGCCGCAACATCCGGGTCCCTGAATGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGCACCGCTGCTCGGCGCCTg                                                                                                                                >  2:1082819/1‑150 (MQ=255)
                         cATCAAACTGTAATGCCAACGCCGCAACATCCGGGTCCCTGAATGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGCACCGCTGCTCGGCGCCTGcac                                                                                                                             >  1:1016934/1‑150 (MQ=255)
                           tCAAACTGTAATGCCAACGCCGCAACATCCGGGTCCCTGAATGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGCACCGCTGCTCGGCGCCTGCACAg                                                                                                                           >  1:1519043/1‑150 (MQ=255)
                             aaaCTGTAATGCCAACGCCGCAACATCCGGGTCCCTGAATGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGTGCCAAGGCACCgata                                                                                                                                            <  1:2134264/132‑4 (MQ=255)
                             aaaCTGTAATGCCAACGCCGCAACATCCGGGTCCCTGAATGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGTGCCAAGGCACCgata                                                                                                                                            >  2:2134264/1‑129 (MQ=255)
                              aaCTGTAATGCCAACGCCGCAACATCCGGGTCCCTGAATGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCt                                                                                                                        >  2:128714/1‑150 (MQ=255)
                                 tGTAATGCCAACGCCGCAACATCCGGGTCCCTGAATGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTcc                                                                                                                     <  1:306022/150‑1 (MQ=255)
                                    aaTGCCAACGCCGCAACATCCGGGTCCCTGAATGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAg                                                                                                                  <  1:544499/150‑1 (MQ=255)
                                     aTGCCAACGCCGCAACATCCGGGTCCCTGAATGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAgg                                                                                                                 <  2:2215204/150‑1 (MQ=255)
                                      tGCCAACGCCGCAACATCCGGGTCCCTGAATGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAggg                                                                                                                <  1:644729/150‑1 (MQ=255)
                                          aaCGCCGCAACATCCGGGTCCCTGAATGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGgcagc                                                                                                            >  1:430739/1‑150 (MQ=255)
                                           aCGCCGCAACATCCGGGTCCCTGAATGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGgcagca                                                                                                           <  2:1497302/150‑1 (MQ=255)
                                            cgccgcAACATCCGGGTCCCTGAATGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGCa                                                                                                                                                  <  2:2375649/111‑1 (MQ=255)
                                            cgccgcAACATCCGGGTCCCTGAATGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGCa                                                                                                                                                  >  1:2375649/1‑111 (MQ=255)
                                               cgcAACATCCGGGTCCCTGAATGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGggc                                                                                                       >  2:654283/1‑150 (MQ=255)
                                                  aaCATCCGGGTCCCTGAATGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGCCTGGATGTATATTGGTGCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGggcggc                                                                                                    >  2:685682/1‑150 (MQ=255)
                                                      tCCGGGTCCCTGAATGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATg                                                                                                >  2:2141029/1‑150 (MQ=255)
                                                       ccGGGTCCCTGAATGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGCACCGCTGCTCGGCGCCTGCAAAGCCTTCCCAGGGCAGCAGGGCGGCAATGc                                                                                               >  1:1673230/1‑150 (MQ=255)
                                                        cGGGTCCCTGAATGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGcc                                                                                              <  2:1016934/150‑1 (MQ=255)
                                                         gggTCCCTGAATGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGccc                                                                                             >  2:1977565/1‑150 (MQ=255)
                                                               cTGAATGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCg                                                                                       >  2:120537/1‑150 (MQ=255)
                                                                 gAATGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTc                                                                                                                      <  1:1780574/117‑1 (MQ=255)
                                                                 gAATGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTc                                                                                                                      >  2:1780574/1‑117 (MQ=255)
                                                                   aTGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACtt                                                                                   >  1:1554327/1‑150 (MQ=255)
                                                                    tGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTg                                                                                  <  1:176192/150‑1 (MQ=255)
                                                                    tGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTg                                                                                  <  1:176156/150‑1 (MQ=255)
                                                                    tGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTg                                                                                  <  2:895100/150‑1 (MQ=255)
                                                                       aCGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCACAGCTAGCCTTGcgg                                                                               >  2:477384/1‑148 (MQ=255)
                                                                         gTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTa                                                                             >  1:1730142/1‑150 (MQ=255)
                                                                             ttAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTc                                                                         <  2:1828154/150‑1 (MQ=255)
                                                                             ttAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTc                                                                         >  1:948796/1‑150 (MQ=255)
                                                                             ttAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTc                                                                         >  1:56805/1‑150 (MQ=255)
                                                                                     ggCGGATGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGTATGGGTATCGGTGCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAggg                                                                                                                <  1:278359/103‑1 (MQ=255)
                                                                                     ggCGGATGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGTATGGGTATCGGTGCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAggg                                                                                                                >  2:278359/1‑103 (MQ=255)
                                                                                           tGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGa                                                           <  1:654283/150‑1 (MQ=255)
                                                                                           tGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGa                                                           <  2:155859/150‑1 (MQ=255)
                                                                                              gATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGcc                                                                      >  1:1804618/1‑136 (MQ=255)
                                                                                              gATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGcc                                                                      <  2:1804618/136‑1 (MQ=255)
                                                                                                tGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGTGCCtt                                                                                                                                                       >  1:1592191/1‑55 (MQ=255)
                                                                                                tGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGTGCCtt                                                                                                                                                       <  2:1592191/55‑1 (MQ=255)
                                                                                                tGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGAGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGATGccc                                                      >  2:355634/1‑150 (MQ=255)
                                                                                                tGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATAGGTGCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGATGccc                                                      <  1:2281641/150‑1 (MQ=255)
                                                                                                    gAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGATGCCCGCCa                                                  >  1:1204051/1‑150 (MQ=255)
                                                                                                    gAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGATGCCCGCCa                                                  >  1:1217466/1‑150 (MQ=255)
                                                                                                    gAGCAGTGTGCACAGGCGCGAAGTGATCGACTGGATCGATGTTCTGCAAGGCCTGCCGCGGCTCGGCGCGCTGGGGGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGAGTTGCAGTACGTCGCCGATACACTCGATGCCCGCCa                                                  >  1:420696/1‑150 (MQ=255)
                                                                                                     aGCAGTGTGCACGGGCGCGAAGTGATCGGCTGGATGGGTATCGGTGCCAAGGCACCga                                                                                                                                              <  1:1886340/58‑2 (MQ=255)
                                                                                                     aGCAGTGTGCACGGGCGCGAAGTGATCGGCTGGATGGGTATCGGTGCCAAGGCACCga                                                                                                                                              >  2:1886340/1‑57 (MQ=255)
                                                                                                               acaGGCGCGAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCAGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGATGCCCGCCAGCCTGGCCAgg                                       >  1:1536329/1‑150 (MQ=255)
                                                                                                                   gcgcGAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGATGCCCGCCAGCCTGGCCAGGCggt                                   <  1:2313377/150‑1 (MQ=255)
                                                                                                                   gcgcGAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGATGCCCGCCAGCCTGGCCAGGCggt                                   <  2:1554327/150‑1 (MQ=255)
                                                                                                                    cgcgAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGATGCCCGCCAGCCTGGCCAGGCggtg                                  <  1:128714/150‑1 (MQ=255)
                                                                                                                       gAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGATGCCCGCCAGCCTGGCCAGGCGGTGGTa                               >  1:2079482/1‑150 (MQ=255)
                                                                                                                        aaGTGATCGGCTGGATGGGTATCGGTGCCTTGGCACCGCTGCTCGGCGCCTGCGCAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGATGCCCGCCAGCCTGGCCAGGCGGTGGTAc                              <  1:2302532/150‑1 (MQ=255)
                                                                                                                             aTCGGCTGGATGGGTATCGGTGCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGATGCCCGCCAGCCTGGCCAGGCGGTGGTACCGGCt                         >  1:260663/1‑150 (MQ=255)
                                                                                                                             aTCGGCTGGATGGGTATCGGTGCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGATGCCCGCCAGCCTGGCCAGGCGGTGGTACCGGCt                         >  2:2341100/1‑150 (MQ=255)
                                                                                                                              tCGGCTGGATGGGTATCGGTGCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTg                                                                                  <  2:1571585/92‑1 (MQ=255)
                                                                                                                              tCGGCTGGATGGGTATCGGTGCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTg                                                                                  >  1:1571585/1‑92 (MQ=255)
                                                                                                                                ggCTGGATGGGTATCGGTGCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGATGCCCGCCAGCCTGGCCAGGCGGTGGTACCGGCTAcc                      <  1:1245433/150‑1 (MQ=255)
                                                                                                                                 gCTGGATGGGTATCGGTGCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAAt                                                                                                 <  2:2055846/74‑1 (MQ=255)
                                                                                                                                 gCTGGATGGGTATCGGTGCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAAt                                                                                                 >  1:2055846/1‑74 (MQ=255)
                                                                                                                                 gCTGGATGGGTATCGGTGCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGATGCCCGCCAGCCTg                                             >  1:1300162/1‑126 (MQ=255)
                                                                                                                                 gCTGGATGGGTATCGGTGCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGATGCCCGCCAGCCTg                                             <  2:1300162/126‑1 (MQ=255)
                                                                                                                                 gCTGGATGGGTATCGGTGCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGATGCCCGCCAGCCTGGCCAg                                        <  1:1177178/131‑1 (MQ=255)
                                                                                                                                 gCTGGATGGGTATCGGTGCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGATGCCCGCCAGCCTGGCCAg                                        >  2:1177178/1‑131 (MQ=255)
                                                                                                                                 gCTGGATGGGTATCGGTGCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGATGCCCGCCAGCCTGGCCAGGCGGTGGTACCGGCTAccc                     >  1:706749/1‑150 (MQ=255)
                                                                                                                                  cTGGATGGGTATCGGTGCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGATGCCCGCCAGCCTGGCCa                                         >  1:47365/1‑129 (MQ=255)
                                                                                                                                  cTGGATGGGTATCGGTGCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGATGCCCGCCAGCCTGGCCa                                         <  2:47365/129‑1 (MQ=255)
                                                                                                                                     gATGGGTCTCGGTGCCTTGACACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGATGCCCGCCAGCCTGGCCAGGCGGTGGTACCGGCTACCCGGtt                 >  2:348896/1‑150 (MQ=255)
                                                                                                                                     gATGGGTATCGGTGCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGATGCCCGCCAGCCTGGCCAGGCGGTGGTACCGGCTACCCGGtt                 <  2:1519043/150‑1 (MQ=255)
                                                                                                                                       tGGGTATCGGTGCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGATGCCCGCCAGCCTGGCCAGGCGGTGGTACCGGCTACCCGGTTgg               <  2:430739/150‑1 (MQ=255)
                                                                                                                                         ggTATCGGTGCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGATGCCCGCCAGCCTGGCCAGGCGGTGGTACCGGCTACCCGGTTgggg             >  2:1228254/1‑150 (MQ=255)
                                                                                                                                          gTATCGGTGCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGATGCCCGCCAGCCTGGCCAGGCGGTGGTACCGGCTACCCGGTTGGGGc            >  2:1020134/1‑150 (MQ=255)
                                                                                                                                          gTATCGGTGCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGATGCCCGCCAGCCTGGCCAGGCGGTGGTACCGGCTACCCGGTTGGGGc            >  1:1392239/1‑150 (MQ=255)
                                                                                                                                          gTATCGGTGCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGATGCCCGCCAGCCTGGCCAGGCGGTGGTACCGGCTACCCGGTGGGGGc            >  2:60946/1‑150 (MQ=255)
                                                                                                                                           tATCGGTGCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGATGCCCGCCAGCCTGGCCAGGCGGTGGTACCGGCTACCCGGTTGGGGcc           >  2:210316/1‑150 (MQ=255)
                                                                                                                                             gcGGTGCCAAGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGATGCCCGCCAGCCTGGCCAGGCGGTGGTACCGGCTACCCGGTTGGGGCCgg         >  1:2289971/2‑150 (MQ=255)
                                                                                                                                             gcGGTGCCAAGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGATGCCCGCCAGCCTGGCCAGGCGGTGGTACCGGCTACCCGGTTGGGGCCgg         >  2:2335907/2‑150 (MQ=255)
                                                                                                                                             gcGGTGCCAAGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGATGCCCGCCAGCCTGGCCAGGCGGTGGTACCGGCTACCCGGTTGGGGCCgg         >  2:1018281/2‑150 (MQ=255)
                                                                                                                                                    cTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGATGCCCGCCAGCCTGGCCAGGCGGTGGTACCGGCTACCCGGTTGGGGCCGGTCAGCCa  >  1:973145/1‑150 (MQ=255)
                                                                                                                                                    cTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGATGCCCGCCAGCCTGGCCAGGCGGTGGTACCGGCTACCCGGTTGGGGCCGGTCAGCCa  >  1:1160138/1‑150 (MQ=255)
                                                                                                                                                     |                                                                                                                                                      
ATTGGAATTGCTGTCGGATTTCTGCCATCAAACTGTAATGCCAACGCCGCAACATCCGGGTCCCTGAATGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGATGCCCGCCAGCCTGGCCAGGCGGTGGTACCGGCTACCCGGTTGGGGCCGGTCAGCCA  >  NC_002947/1193785‑1194082

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: