Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 1,193,935 T→A 8.6% L23* (TTG→TAG) ‡ uxpA → lipoprotein UxpA

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029471,193,9350TA 8.6% 252.4 / 12.2 83L23* (TTG→TAG) ‡uxpAlipoprotein UxpA
Reads supporting (aligned to +/- strand):  ref base T (45/30);  new base A (5/2);  total (51/32)
Fisher's exact test for biased strand distribution p-value = 7.00e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.64e-01

TCGGATTTCTGCCATCAAACTGTAATGCCAACGCCGCAACATCCGGGTCCCTGAATGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGC‑ACCGCTGCTCGGCGC‑CTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGATGCCCGCCAGCCTGGCCAGGCGGTGGTACCGGCTACCCGGTTGGGGCCGGTCAGCCA  >  NC_002947/1193798‑1194082
                                                                                                                                         |                                                                                                                                                     
tCGGATTTCTGCCATCAAACTGTAATGCCAACGCCGCAACATCCGGGTCCCTGAATGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGC‑ACCgctgct                                                                                                                                          >  2:221803/1‑150 (MQ=255)
 cGGATTTCTGCCATCAAACTGTAATGCCAACGCCGCAACATCCGGGTCCCTGAATGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGC‑ACCGCTGCTc                                                                                                                                         <  1:1938046/150‑1 (MQ=255)
  ggATTTCTGCCATCAAACTGTAATGCCAACGCCGCAACATCCGGGTCCCTGAATGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGC‑ACCGCTGCTCg                                                                                                                                        >  2:306022/1‑150 (MQ=255)
     tttCTGCCATCAAACTGTAATGCCAACGCCGCAACATCCGGGTCCCTGAATGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGC‑ACCGCTGCTCGgcg                                                                                                                                     >  1:1828154/1‑150 (MQ=255)
     tttCTGCCATCAAACTGTAATGCCAACGCCGCAACATCCGGGTCCCTGAATGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGC‑ACCGCTGCTCGgcg                                                                                                                                     >  1:155859/1‑150 (MQ=255)
         tGCCATCAAACTGTAATGCCAACGCCGCAACATCCGGGTCCCTGAATGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGC‑ACCGCTGCTCGGCGC‑CTg                                                                                                                                >  2:1082819/1‑150 (MQ=255)
            cATCAAACTGTAATGCCAACGCCGCAACATCCGGGTCCCTGAATGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGC‑ACCGCTGCTCGGCGC‑CTGcac                                                                                                                             >  1:1016934/1‑150 (MQ=255)
              tCAAACTGTAATGCCAACGCCGCAACATCCGGGTCCCTGAATGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGC‑ACCGCTGCTCGGCGC‑CTGCACAg                                                                                                                           >  1:1519043/1‑150 (MQ=255)
                aaaCTGTAATGCCAACGCCGCAACATCCGGGTCCCTGAATGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGTGCCAAGGC‑ACCgata                                                                                                                                            <  1:2134264/132‑4 (MQ=255)
                aaaCTGTAATGCCAACGCCGCAACATCCGGGTCCCTGAATGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGTGCCAAGGC‑ACCgata                                                                                                                                            >  2:2134264/1‑129 (MQ=255)
                 aaCTGTAATGCCAACGCCGCAACATCCGGGTCCCTGAATGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGC‑ACCGCTGCTCGGCGC‑CTGCACAGCCt                                                                                                                        >  2:128714/1‑150 (MQ=255)
                    tGTAATGCCAACGCCGCAACATCCGGGTCCCTGAATGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGC‑ACCGCTGCTCGGCGC‑CTGCACAGCCTTcc                                                                                                                     <  1:306022/150‑1 (MQ=255)
                       aaTGCCAACGCCGCAACATCCGGGTCCCTGAATGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGC‑ACCGCTGCTCGGCGC‑CTGCACAGCCTTCCCAg                                                                                                                  <  1:544499/150‑1 (MQ=255)
                        aTGCCAACGCCGCAACATCCGGGTCCCTGAATGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGC‑ACCGCTGCTCGGCGC‑CTGCACAGCCTTCCCAgg                                                                                                                 <  2:2215204/150‑1 (MQ=255)
                         tGCCAACGCCGCAACATCCGGGTCCCTGAATGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGC‑ACCGCTGCTCGGCGC‑CTGCACAGCCTTCCCAggg                                                                                                                <  1:644729/150‑1 (MQ=255)
                             aaCGCCGCAACATCCGGGTCCCTGAATGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGC‑ACCGCTGCTCGGCGC‑CTGCACAGCCTTCCCAGGgcagc                                                                                                            >  1:430739/1‑150 (MQ=255)
                              aCGCCGCAACATCCGGGTCCCTGAATGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGC‑ACCGCTGCTCGGCGC‑CTGCACAGCCTTCCCAGGgcagca                                                                                                           <  2:1497302/150‑1 (MQ=255)
                               cgccgcAACATCCGGGTCCCTGAATGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGC‑a                                                                                                                                                  >  1:2375649/1‑111 (MQ=255)
                               cgccgcAACATCCGGGTCCCTGAATGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGC‑a                                                                                                                                                  <  2:2375649/111‑1 (MQ=255)
                                  cgcAACATCCGGGTCCCTGAATGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGC‑ACCGCTGCTCGGCGC‑CTGCACAGCCTTCCCAGGGCAGCAGggc                                                                                                       >  2:654283/1‑150 (MQ=255)
                                     aaCATCCGGGTCCCTGAATGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGCCTGGATGTATATTGGTGCCTTGGC‑ACCGCTGCTCGGCGC‑CTGCACAGCCTTCCCAGGGCAGCAGggcggc                                                                                                    >  2:685682/1‑150 (MQ=255)
                                         tCCGGGTCCCTGAATGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGC‑ACCGCTGCTCGGCGC‑CTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATg                                                                                                >  2:2141029/1‑150 (MQ=255)
                                          ccGGGTCCCTGAATGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGC‑ACCGCTGCTCGGCGC‑CTGCAAAGCCTTCCCAGGGCAGCAGGGCGGCAATGc                                                                                               >  1:1673230/1‑150 (MQ=255)
                                           cGGGTCCCTGAATGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGC‑ACCGCTGCTCGGCGC‑CTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGcc                                                                                              <  2:1016934/150‑1 (MQ=255)
                                            gggTCCCTGAATGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGC‑ACCGCTGCTCGGCGC‑CTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGccc                                                                                             >  2:1977565/1‑150 (MQ=255)
                                                  cTGAATGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGC‑ACCGCTGCTCGGCGC‑CTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCg                                                                                       >  2:120537/1‑150 (MQ=255)
                                                    gAATGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGC‑ACCGCTGCTCGGCGC‑CTGCACAGCCTTc                                                                                                                      <  1:1780574/117‑1 (MQ=255)
                                                    gAATGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGC‑ACCGCTGCTCGGCGC‑CTGCACAGCCTTc                                                                                                                      >  2:1780574/1‑117 (MQ=255)
                                                      aTGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGC‑ACCGCTGCTCGGCGC‑CTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACtt                                                                                   >  1:1554327/1‑150 (MQ=255)
                                                       tGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGC‑ACCGCTGCTCGGCGC‑CTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTg                                                                                  <  2:895100/150‑1 (MQ=255)
                                                       tGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGC‑ACCGCTGCTCGGCGC‑CTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTg                                                                                  <  1:176156/150‑1 (MQ=255)
                                                       tGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGC‑ACCGCTGCTCGGCGC‑CTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTg                                                                                  <  1:176192/150‑1 (MQ=255)
                                                          aCGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGC‑ACCGCTGCTCGGCGC‑CTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCACAGCTAGCCTTGcgg                                                                               >  2:477384/1‑148 (MQ=255)
                                                            gTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGC‑ACCGCTGCTCGGCGC‑CTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTa                                                                             >  1:1730142/1‑150 (MQ=255)
                                                                ttAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGC‑ACCGCTGCTCGGCGC‑CTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTc                                                                         <  2:1828154/150‑1 (MQ=255)
                                                                ttAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGC‑ACCGCTGCTCGGCGC‑CTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTc                                                                         >  1:56805/1‑150 (MQ=255)
                                                                ttAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGC‑ACCGCTGCTCGGCGC‑CTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTc                                                                         >  1:948796/1‑150 (MQ=255)
                                                                        ggCGGATGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGTATGGGTATCGGTGCCTTGGC‑ACCGCTGCTCGGCGC‑CTGCACAGCCTTCCCAggg                                                                                                                <  1:278359/103‑1 (MQ=255)
                                                                        ggCGGATGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGTATGGGTATCGGTGCCTTGGC‑ACCGCTGCTCGGCGC‑CTGCACAGCCTTCCCAggg                                                                                                                >  2:278359/1‑103 (MQ=255)
                                                                              tGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGC‑ACCGCTGCTCGGCGC‑CTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGa                                                           <  2:155859/150‑1 (MQ=255)
                                                                              tGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGC‑ACCGCTGCTCGGCGC‑CTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGa                                                           <  1:654283/150‑1 (MQ=255)
                                                                                 gATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGC‑ACCGCTGCTCGGCGC‑CTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGcc                                                                      <  2:1804618/136‑1 (MQ=255)
                                                                                 gATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGC‑ACCGCTGCTCGGCGC‑CTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGcc                                                                      >  1:1804618/1‑136 (MQ=255)
                                                                                   tGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGTGCCtt                                                                                                                                                       <  2:1592191/55‑1 (MQ=255)
                                                                                   tGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGTGCCtt                                                                                                                                                       >  1:1592191/1‑55 (MQ=255)
                                                                                   tGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGC‑ACCGCTGCTCGGCGC‑CTGCACAGCCTTCCCAGAGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGATGccc                                                      >  2:355634/1‑150 (MQ=255)
                                                                                   tGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATAGGTGCCTTGGC‑ACCGCTGCTCGGCGC‑CTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGATGccc                                                      <  1:2281641/150‑1 (MQ=255)
                                                                                       gAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGC‑ACCGCTGCTCGGCGC‑CTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGATGCCCGCCa                                                  >  1:1217466/1‑150 (MQ=255)
                                                                                       gAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGC‑ACCGCTGCTCGGCGC‑CTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGATGCCCGCCa                                                  >  1:1204051/1‑150 (MQ=255)
                                                                                       gAGCAGTGTGCACAGGCGCGAAGTGATCGACTGGATCGATGT‑TCTGCAAGGCCTGCCGCGGCTCGGCGCGCTG‑GGGGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGAGTTGCAGTACGTCGCCGATACACTCGATGCCCGCCa                                                  >  1:420696/1‑150 (MQ=255)
                                                                                        aGCAGTGTGCACGGGCGCGAAGTGATCGGCTGGATGGGTATCGGTGCCAAGGC‑ACCga                                                                                                                                              <  1:1886340/58‑2 (MQ=255)
                                                                                        aGCAGTGTGCACGGGCGCGAAGTGATCGGCTGGATGGGTATCGGTGCCAAGGC‑ACCga                                                                                                                                              >  2:1886340/1‑57 (MQ=255)
                                                                                                  acaGGCGCGAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGC‑ACCGCTGCTCGGCGC‑CTGCACAGCCTTCCCAGGGCAGCAGGGCAGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGATGCCCGCCAGCCTGGCCAgg                                       >  1:1536329/1‑150 (MQ=255)
                                                                                                      gcgcGAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGC‑ACCGCTGCTCGGCGC‑CTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGATGCCCGCCAGCCTGGCCAGGCggt                                   <  2:1554327/150‑1 (MQ=255)
                                                                                                      gcgcGAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGC‑ACCGCTGCTCGGCGC‑CTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGATGCCCGCCAGCCTGGCCAGGCggt                                   <  1:2313377/150‑1 (MQ=255)
                                                                                                       cgcgAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGC‑ACCGCTGCTCGGCGC‑CTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGATGCCCGCCAGCCTGGCCAGGCggtg                                  <  1:128714/150‑1 (MQ=255)
                                                                                                          gAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGC‑ACCGCTGCTCGGCGC‑CTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGATGCCCGCCAGCCTGGCCAGGCGGTGGTa                               >  1:2079482/1‑150 (MQ=255)
                                                                                                           aaGTGATCGGCTGGATGGGTATCGGTGCCTTGGC‑ACCGCTGCTCGGCGC‑CTGCGCAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGATGCCCGCCAGCCTGGCCAGGCGGTGGTAc                              <  1:2302532/150‑1 (MQ=255)
                                                                                                                aTCGGCTGGATGGGTATCGGTGCCTTGGC‑ACCGCTGCTCGGCGC‑CTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGATGCCCGCCAGCCTGGCCAGGCGGTGGTACCGGCt                         >  2:2341100/1‑150 (MQ=255)
                                                                                                                aTCGGCTGGATGGGTATCGGTGCCTTGGC‑ACCGCTGCTCGGCGC‑CTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGATGCCCGCCAGCCTGGCCAGGCGGTGGTACCGGCt                         >  1:260663/1‑150 (MQ=255)
                                                                                                                 tCGGCTGGATGGGTATCGGTGCCTTGGC‑ACCGCTGCTCGGCGC‑CTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTg                                                                                  <  2:1571585/92‑1 (MQ=255)
                                                                                                                 tCGGCTGGATGGGTATCGGTGCCTTGGC‑ACCGCTGCTCGGCGC‑CTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTg                                                                                  >  1:1571585/1‑92 (MQ=255)
                                                                                                                   ggCTGGATGGGTATCGGTGCCTTGGC‑ACCGCTGCTCGGCGC‑CTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGATGCCCGCCAGCCTGGCCAGGCGGTGGTACCGGCTAcc                      <  1:1245433/150‑1 (MQ=255)
                                                                                                                    gCTGGATGGGTATCGGTGCCTTGGC‑ACCGCTGCTCGGCGC‑CTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAAt                                                                                                 <  2:2055846/74‑1 (MQ=255)
                                                                                                                    gCTGGATGGGTATCGGTGCCTTGGC‑ACCGCTGCTCGGCGC‑CTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAAt                                                                                                 >  1:2055846/1‑74 (MQ=255)
                                                                                                                    gCTGGATGGGTATCGGTGCCTTGGC‑ACCGCTGCTCGGCGC‑CTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGATGCCCGCCAGCCTg                                             >  1:1300162/1‑126 (MQ=255)
                                                                                                                    gCTGGATGGGTATCGGTGCCTTGGC‑ACCGCTGCTCGGCGC‑CTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGATGCCCGCCAGCCTg                                             <  2:1300162/126‑1 (MQ=255)
                                                                                                                    gCTGGATGGGTATCGGTGCCTTGGC‑ACCGCTGCTCGGCGC‑CTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGATGCCCGCCAGCCTGGCCAg                                        >  2:1177178/1‑131 (MQ=255)
                                                                                                                    gCTGGATGGGTATCGGTGCCTTGGC‑ACCGCTGCTCGGCGC‑CTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGATGCCCGCCAGCCTGGCCAg                                        <  1:1177178/131‑1 (MQ=255)
                                                                                                                    gCTGGATGGGTATCGGTGCCTTGGC‑ACCGCTGCTCGGCGC‑CTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGATGCCCGCCAGCCTGGCCAGGCGGTGGTACCGGCTAccc                     >  1:706749/1‑150 (MQ=255)
                                                                                                                     cTGGATGGGTATCGGTGCCTTGGC‑ACCGCTGCTCGGCGC‑CTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGATGCCCGCCAGCCTGGCCa                                         <  2:47365/129‑1 (MQ=255)
                                                                                                                     cTGGATGGGTATCGGTGCCTTGGC‑ACCGCTGCTCGGCGC‑CTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGATGCCCGCCAGCCTGGCCa                                         >  1:47365/1‑129 (MQ=255)
                                                                                                                        gATGGGTCTCGGTGCCTTGAC‑ACCGCTGCTCGGCGC‑CTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGATGCCCGCCAGCCTGGCCAGGCGGTGGTACCGGCTACCCGGtt                 >  2:348896/1‑150 (MQ=255)
                                                                                                                        gATGGGTATCGGTGCCTTGGC‑ACCGCTGCTCGGCGC‑CTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGATGCCCGCCAGCCTGGCCAGGCGGTGGTACCGGCTACCCGGtt                 <  2:1519043/150‑1 (MQ=255)
                                                                                                                          tGGGTATCGGTGCCTTGGC‑ACCGCTGCTCGGCGC‑CTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGATGCCCGCCAGCCTGGCCAGGCGGTGGTACCGGCTACCCGGTTgg               <  2:430739/150‑1 (MQ=255)
                                                                                                                            ggTATCGGTGCCTTGGC‑ACCGCTGCTCGGCGC‑CTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGATGCCCGCCAGCCTGGCCAGGCGGTGGTACCGGCTACCCGGTTgggg             >  2:1228254/1‑150 (MQ=255)
                                                                                                                             gTATCGGTGCCTTGGC‑ACCGCTGCTCGGCGC‑CTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGATGCCCGCCAGCCTGGCCAGGCGGTGGTACCGGCTACCCGGTTGGGGc            >  2:1020134/1‑150 (MQ=255)
                                                                                                                             gTATCGGTGCCTTGGC‑ACCGCTGCTCGGCGC‑CTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGATGCCCGCCAGCCTGGCCAGGCGGTGGTACCGGCTACCCGGTTGGGGc            >  1:1392239/1‑150 (MQ=255)
                                                                                                                             gTATCGGTGCCTTGGC‑ACCGCTGCTCGGCGC‑CTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGATGCCCGCCAGCCTGGCCAGGCGGTGGTACCGGCTACCCGGTGGGGGc            >  2:60946/1‑150 (MQ=255)
                                                                                                                              tATCGGTGCCTTGGC‑ACCGCTGCTCGGCGC‑CTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGATGCCCGCCAGCCTGGCCAGGCGGTGGTACCGGCTACCCGGTTGGGGcc           >  2:210316/1‑150 (MQ=255)
                                                                                                                                gcGGTGCCAAGGC‑ACCGCTGCTCGGCGC‑CTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGATGCCCGCCAGCCTGGCCAGGCGGTGGTACCGGCTACCCGGTTGGGGCCgg         >  2:2335907/2‑150 (MQ=255)
                                                                                                                                gcGGTGCCAAGGC‑ACCGCTGCTCGGCGC‑CTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGATGCCCGCCAGCCTGGCCAGGCGGTGGTACCGGCTACCCGGTTGGGGCCgg         >  2:1018281/2‑150 (MQ=255)
                                                                                                                                gcGGTGCCAAGGC‑ACCGCTGCTCGGCGC‑CTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGATGCCCGCCAGCCTGGCCAGGCGGTGGTACCGGCTACCCGGTTGGGGCCgg         >  1:2289971/2‑150 (MQ=255)
                                                                                                                                       cTTGGC‑ACCGCTGCTCGGCGC‑CTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGATGCCCGCCAGCCTGGCCAGGCGGTGGTACCGGCTACCCGGTTGGGGCCGGTCAGCCa  >  1:973145/1‑150 (MQ=255)
                                                                                                                                       cTTGGC‑ACCGCTGCTCGGCGC‑CTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGATGCCCGCCAGCCTGGCCAGGCGGTGGTACCGGCTACCCGGTTGGGGCCGGTCAGCCa  >  1:1160138/1‑150 (MQ=255)
                                                                                                                                         |                                                                                                                                                     
TCGGATTTCTGCCATCAAACTGTAATGCCAACGCCGCAACATCCGGGTCCCTGAATGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGC‑ACCGCTGCTCGGCGC‑CTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGATGCCCGCCAGCCTGGCCAGGCGGTGGTACCGGCTACCCGGTTGGGGCCGGTCAGCCA  >  NC_002947/1193798‑1194082

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑