| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,209,553 | C→G | 6.3% | G52G (GGC→GGG) | ytnA → | amino acid permease YtnA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,209,553 | 0 | C | G | 6.3% | 353.6 / 11.2 | 112 | G52G (GGC→GGG) | ytnA | amino acid permease YtnA |
| Reads supporting (aligned to +/- strand): ref base C (50/55); new base G (4/3); total (54/58) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.10e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.09e-01 | |||||||||||
Only 100 of 119 total aligned reads displayed.
TCGGCAACCACTCTGCCCACGGCCAGGCCACTGAAGGCGGCCCGCTCAAGCGTGAACTGGGCGAACGGCACATCCGCCTGATGGCGCTGGGCGCCTGTATCGGTGTCGGTCTTTTCCTCGGTTCGGCCAAGGCGATCGAAATGGCCGGCCCGGCCATCATGTTGTCCTACATCATCGGCGGCCTGGCCATTC‑TGGTGATCATGCGCGCCCTTGGTGAAATGGCCGTGCACAACCCTGTCGCCGGCTCGTTCAGCCGTTATGCCCAGGATTACCTCGGCCCATTGGCGGGCTTCCTGAC > NC_002947/1209405‑1209702 | tCGGCAACCACTCTGCCCACGGCCAGGCCACTGAAGGCGGCCCGCTCAAGCGTGAACTGGGCGAACGGCACATCCGCCTGATGGCGCTGGGCGCCTGTATCGGTGTCGGTCTTTTCCTCGGTTCGGCCAAGGCGATCGAAATggccggcc < 1:590302/150‑1 (MQ=255) gCAACCACTCTGCCCACGGCCAGGCCACTGAAGGCGGCCCGCTCAAGCGTGAACTGGGCGAACGGCACATCCGCCTGATGGCGCTGGGCGCCTGTATCGGTGTCGGTCTTTTCCTCGGTTCGGCCAAGGCGATCGAAATGGccggcccgg > 2:321529/1‑150 (MQ=255) cAACCACTCTGCCCACGGCCAGGCCACTGAAGGCGGCCCGCTCAAGCGTGAACTGGGCGAACGGCACATCCGCCTGATGGCGCTGGGCGCCTGTATCGGTGTCGGTCTTTTTCTCGGTTCGGCCAAGGCGATCGAAATGGccggcccggc < 1:1191630/150‑1 (MQ=255) aaCCACTCTGCCCACGGCCAGGCCACTGAAGGCGGCCCGCTCAAGCGTGAACTGGGCGAACGGCACATCCGCCTGATGGCGCTGGGCGCCTGTATCGGTGTCGGTCTTTTCCTCGGTTCGGCCAAGGCGATCGAAATGGCcggcccggcc > 2:590021/1‑150 (MQ=255) aaCCACTCTGCCCACGGCCAGGCCACTGAAGGCGGCCCGCTCAAGCGTGAACTGGGCGAACGGCACATCCGCCTGATGGCGCTGGGCGCCTGTATCGGTGTCGGTCTTTTCCTCGGCTCGGCCAAGGCGATCGAAATGGCcggcccggcc > 2:854288/1‑150 (MQ=255) ccACTCTGCCCACGGCCAGGCCACTGAAGGCGGCCCGCTCAAGCGTGAACTGGGCGAACGGCACATCCGCCTGATGGCGCTGGGCGCCTGTATCGGTGTCGGTCTTTTCCTCGGTTCGGCCAAGGCGATCGAAATGGCCGGCCCGGCcat > 1:177236/1‑150 (MQ=255) cACTCTGCCGACGGCCAGGCCACTGAAGGCGGCCCGCTCAAGCGTGAACTGGGCGAACGGCACACCCGCCTGATGGCGCTGGGCGCCTGTATCGGTGTCGGTCTTTTCCTCGGTTCGGCCAAGGCGATCGAAATGGCCGGCCCGGCcatc < 2:129806/150‑1 (MQ=255) cACTCTGCCCACGGCCAGGCCACTGAAGGCGGCCCGCTCAAGCGTGAACTGGGCGAACGGCACATCCGCCTGATGGCGCTGGGCGCCTGTATCGGTGTCGGTCTTTTCCTCGGTTCGGCCAAGGCGATCGAAATGGCCGGCCCGGCcatc > 2:1027220/1‑150 (MQ=255) cACTCTGCCCACGGCCAGGCCACTGAAGAAGGCCCGCTCGAGCGTGCACTGGGCGAACGGCACATCGGCCTGATGGGGCTGGGCGCCTGTATGGGTGTCGGTCTTTTCCTCGGTTCGGCAAAGGAGATCGAGATGTGCGGCCCGGCcatc > 2:392941/1‑150 (MQ=255) ctctGCCCACGGCCAGGCCACTGAAGGCGGCCCGCTCAAGCGTGAACTGGGCGAACGGCACATCCGCCTGATGGCGCTGGGCGCCTGTATCGGTGTCGGTCTTTTCCTCGGTTCGGCCAAGGCGATCGAAATGGCCGGCCCGGCcatcat > 2:2059969/1‑150 (MQ=255) ctGCCCACGGCCAGGCCACTGAAGGCGGCCCGCTCAAGCGTGAACTGGGTGAACGGCACATCCGCCTGATGGCGCTGGGCGCCTGTATCGGTGTCGGTCTTTTCCTCGGTTCGGCCAAGGCGATCGAAATGGCCGGGCCGGCcatttcga < 1:288174/150‑6 (MQ=255) tGCCCACGGCCAGGCCACTGAAGGCGGCCCGCTCAAGCGTGAACTGGGCGAACGGCACATCCGCCTGATGGCGCTGGGCGCCTGTATCGGTGTCGGTCTTTTCCTCGGTTCGGCCAAGGCGATCGAAATGGCCGGCCCGGCCATCAtgtt < 1:153584/150‑1 (MQ=255) tGCCCACGGCCAGGCCACTGAAGGCGGCCCGCTCAAGCGTGAACTGGGCGAACGGCACATCCGCCTGATGGCGCTGGGCGCCTGTATCGGTGTCGGTCTTTTCCTCGGTTCGGCCAAGGCGATCGAAATGGCCGGCCCGGCCATCAtgtt < 2:2376816/150‑1 (MQ=255) cccACGGCCAGGCCACTGAAGGCGGCCCGCTCAAGCGTGAACTGGGCGAACGGCACATCCGCCTGATGGCGCTGGGCGCCTGTATCGGTGTCGGTCTTTTCCTCGGTTCGGCCAAGGCGATCGAAATGGCCGGCCCGGCCATCAtgttgt > 2:932662/1‑150 (MQ=255) cccACGGCCAGGCCACTGAAGGCGGCCCGCTCAAGCGTGAACTGGGCGAACGGCACATCCGCCTGATGGCGCTGGGCGCCTGTATCGGTGTCGGTCATTTCCTCGGTTCGGCCAAGGCGATCGAAATTGCCTACCCGGCCATCAtgttgt < 2:1234603/150‑1 (MQ=255) ccACTGTCAGGCCACTGAAGGCGGCCCGCTCAAGCGTGAACTGGGCGAACGGCACATCCGCCTGATGGCGCTGGGCGCCTGTATCGGTGTCGGTCTTTTCCTCGGTTCGGCCAAGGCGATCGAAATGGCCGGCCCGGCCATCATGTTGTc < 1:1699027/150‑1 (MQ=255) ccACGGCCATGCCACTGAAGGCGGCCCGCTCAAGCGTGAACTGGGCGAACGGCACATCCGCCTGATGGCGCTGGGCGCCTGTATCGGTGTCGGTCTTTTCCTCGGTTCGGCCAAGGCGATCGAAATGGCCGGCCCGGCCATCATGTTGTc < 2:1714136/150‑1 (MQ=255) cACGGCCAGGCCACTGAAGGCGGCCCGCTCAAGCGTGAACTGGGCGAACGGCACATCCGCCTGATGGCGCTGGGCGCCTGTATCGGTGTCGGTCTTTTCCTCGGTTCGGCCAAGGCGATCGAAATGGCCGGCCCGGCCATCATGTTGTcc > 1:1866085/1‑150 (MQ=255) cACGGCCAGGCCACTGAAGGCGGCCCGCTCAAGCGTGAACTGGGCGAACGGCACATCCGCCTGATGGCGCTGGGCGCCTGTATCGGTGTCGGTCTTTTCCTCGGTTCGGCCAAGGCGATCGAAATGGCCGGCCCGGCCATCATGTTGTcc > 1:1305697/1‑150 (MQ=255) cACGGCCAGGCCACTGAAGGCGGCCCGCTCAAGCGTGAACTGGGCGAACGGCACATCCGCCTGATGGCGCTGGGCGCCTGTATCGGTGTCGGTCTTTTCCTCGGTTCGGCCAAGGCGATCGAAATGGCCGGCCCGGCCATCATGTTGTcc < 1:590021/150‑1 (MQ=255) ggccaggccaCTGAAGGCGGCCCGCTCAAGCGTGAACTGGGCGAACGGCACATCCGCCTGATGGCGCTGGGCGCCTGTATCGGTGTCGGTCTTTTCCTCGGTTCGGCCAAGGCGATCGAAATGGCCGGCCCGGCCATCATGTTGTCCTAc < 2:2169106/150‑1 (MQ=255) gccaggccaCTGAAGGCGGCCCGCTCAAGCGTGAACTGGGCGAACGGCACATCCGCCTGATGGCGCTGGGCGCCTGTATCGGTGTCGGTCTTTTCCTCGGTTCGGCCAAGGCGATCGAAATGGCCGGCCCGGCCATCATGTTGTCCTAca < 1:2396689/150‑1 (MQ=255) gccaggccaCTGAAGGCGGCCCGCTCAAGCGTGAACTGGGCGAACGGCACATCCGCCTGATGGCGCTGGGCGCCTGTATCGGTGTCGGTCTTTTCCTCGGTTCGGCCAAGGCGATCGAAATGGCCGGCCCGGCCATCATGTTGTCCTAca < 2:2298060/150‑1 (MQ=255) gccaCTGAAGGCGGCCCGCTCAAGCGTGAACTGGGCGAACGGCACATCCGCCTGATGGCGCTGGGCGCCTGTATCGGTGTCGGTCTTTTCCTCGGTTCGGCCAAGGCGATCGAAATGGCCGGCCCGGCCATCATGTTGTCCTACatcatc > 1:237309/1‑150 (MQ=255) aCTGAAGGCGGCCCGCTCAAGCGTGAACTGGGCGAACGGCACATCCGCCTGATGGCGCTGGGCGCCTGTATCGGTGTCGGTCTTTTCCTCGGTTCGGCCAAGGCGATCGAAATGGCCGGCCCGGCCATCATGTTGTCCTACATCATcggc < 2:237309/150‑1 (MQ=255) cTGAAGGCGGCCCGCTCAAGCGTGAACTGGGCGAACGGCACATCCGCCTGATGGCGCTGGGCGCCTGTATCGGTGTCGGTCTTTTCCTCGGTTCGGCCAAGGCGATCGAAATGGCCGGCCCGGCCATCATGTTGTCCTACATCATcggcg > 1:748586/1‑150 (MQ=255) aaGACGGCCCGCTCAAGCGTGAACTGGGCGAACGGCACATCCGCCTGATGGCGCTGGGCGCCTGTATCGGTGTCGGTCTTTTCCTCGGTTCGGCCAAGGCGATCGAAATTGCCGGCCCGGCCATCATGTTGTCCTACATCATCGGCGGcc > 2:2129947/1‑150 (MQ=255) ggcggcCCGCTCAAGCGTGAACTGGGCGAACGGCACATCCGCCTGATGGCGCTGGGCGCCTGTATCGGTGTCGGTCTTTTCCTCGGTTCGGCCAAGGCGATCGAAATGGCCGGCCCGGCCATCAtgttg > 2:1198894/1‑129 (MQ=255) ggcggcCCGCTCAAGCGTGAACTGGGCGAACGGCACATCCGCCTGATGGCGCTGGGCGCCTGTATCGGTGTCGGTCTTTTCCTCGGTTCGGCCAAGGCGATCGAAATGGCCGGCCCGGCCATCAtgttg < 1:1198894/129‑1 (MQ=255) ggcggcCCGCTCAAGCGTGAACTGGGCGAACGGCACATCCGCCTGATGGCGCTGGGCGCCTGTATCGGTGTCGGTCTTTTCCTCGGTTCGGCCAAGGCGATCGAAATGGCCGGCCCGGCCATCATGTTGTCCTACATCATCGGCGGCCTg < 1:1736012/150‑1 (MQ=255) gcggcCCGCTCAAGCGTGAACTGGGCGAACGGCACATCCGCCTGATGGCGCTGGGCGCCTGTATCGGTGTCGGTCTTTTCCTCGGTTCGGCCAAGGCGATCGAAATGGCCGGCCCGGCCATCAtgtt > 1:799260/1‑127 (MQ=255) gcggcCCGCTCAAGCGTGAACTGGGCGAACGGCACATCCGCCTGATGGCGCTGGGCGCCTGTATCGGTGTCGGTCTTTTCCTCGGTTCGGCCAAGGCGATCGAAATGGCCGGCCCGGCCATCAtgtt < 2:799260/127‑1 (MQ=255) tCAAGCGTGAACTGGGCGAACGGCACATCCGCCTGATGGCGCTGGGCGCCTGTATCGGTGTCGGTCTTTTCCTCGGTTCGGCCAAGGCGATCGAAATGGCCGGCCCGGCCATCATGTTGTCCTACATCATCGGCGGCCTGGCCATTC‑Tgg > 2:2377146/1‑150 (MQ=255) cAAGCGTGAACTGGGCGAACGGCACATCCGCCTGATGGCGCTGGGCGCCTGTATCGGTGTCGGTCTTTTCCTCGGTTCGGCCAAGGCGATCGAAATGGCCGGCCCGGCCATCATGTTGTCCTACATCATCGGCGGCCTGGCCATTC‑TGGt < 1:932662/150‑1 (MQ=255) cAAGCGTGAACTGGGCGAACGGCACATCCGCCTGATGGCGCTGGGCGCCTGTATCGGTGTCGGTCTTTTCCTCGGTTCGGCCAAGGCGATCGAAATGGCCGGCCCGGCCATCATGTTGTCCTACATCATCGGCGGCCTGGCCATTC‑TGGt < 1:2169631/150‑1 (MQ=255) aGCGTGAACTGGGCGAACGGCACATCCGCCTGATGGCGCTGGGCGCCTGTATCGGTGTCGGTCTTTTCCTCGGTTCGGCCAAGGCGATCGAAATGGCCGGCCCGGCCATCATGTTGTCCTACATCATCGGCGGCCTGGCCATTC‑TGGTGa < 1:321529/150‑1 (MQ=255) aGCGTGAACTGGGCGAACGGCACATCCGCCTGATGGCGCTGGGCGCCTGTATCGGTGTCGGTCTTTTCCTCGGTTCGGCCAAGGCGATCGAAATGGCCGGCCCGGCCATCATGTTGTCCTACATCATCGGCGGCCTGGCCATTC‑TGGTGa < 2:748586/150‑1 (MQ=255) cGTGAACTGGGCGAACGGCACATCCGCCTGATGGCGCTGGGCGCCTGTATCGGTGTCGGTCTTTTCCTCGGTTCGGCCAAGGCGATCGAAATGGCCTGCCCGGCCATCATGTTGTCCTACATCATCGGCGGCCTGGCCATTC‑TGGTGATc < 1:1385700/150‑1 (MQ=255) cGTGAACTGGGCGAACGGCACATCCGCCTGATGGCGCTGGGCGCCTGTATCGGTGTCGGTCTTTTCCTCGGTTCGGCCAAGGCGATCGAAATGGCCGGCCCGGCCATCATGTTGTCCTACATCATCGGCGGCCTGGCCATTC‑TGGTGATc < 1:1027220/150‑1 (MQ=255) aaCTGGGCGAACGGCACATCCGCCTGATGGCGCTGGGCGCCTGTATCGGTGTCGGTCTTTTCCTCGGTTCGGCCAAGGCGATCGAAATGGCCGGCCCGGCCATCATGTTGTCCTACATCATCGGCGGCCTGGCCATTC‑TGGTGATCATgc < 2:1866085/150‑1 (MQ=255) tGGGCGAACGGCACATCGGCCTGAGGGCGCTGGGCGCCTGTATCGGTGTCGGTCTTTTCCTCGGTTCGGCCAAGGCGATCGAAAGCGCCGGCCCGGCCAGCATGGTGTCCTTCATCATAGGCAACATGGCAATTC‑CGGTTATCATgtgcg > 2:891914/1‑150 (MQ=255) aaCGGCACATCCGCCTGATGGCGCTGGGCGCCTGTATCGGTGTCGGTCTTTTCCTCGGTTCGGCCAAGGCGATCGAAATGGCCGGCCCGGCCATCATGTTGTCCTACATCATCGGCGGCCTGGCCATTC‑TGGTGATCATGCGCGCCCTTg < 2:177236/150‑1 (MQ=255) aCGGCACATCCGCCTGATGGCGCTGGGCGCCTGTATCGGTGTCGGTCTTTTCCTCGGTTCGGCCAAGGCGATCGAAATGGCCGGCCCGGCCATCATGTTGTCCTACATCATCggcggc > 1:1053143/1‑118 (MQ=255) aCGGCACATCCGCCTGATGGCGCTGGGCGCCTGTATCGGTGTCGGTCTTTTCCTCGGTTCGGCCAAGGCGATCGAAATGGCCGGCCCGGCCATCATGTTGTCCTACATCATCggcggc < 2:1053143/118‑1 (MQ=255) ggCACATCCGCCTGATGGCGCTGGGCGCCTGTATCGGTGTCGGTCTTTTCCTCGGTTCGGCCAAGGCGATCGAAATGGCCGGCCCGGCCATCATGTTGTCCTACATCATCGGCGGCCTGGCCATTC‑TGGTGATCATGCGCGCCCTTGGTg < 1:1245941/150‑1 (MQ=255) gCACATCCGCCTGATGGCGCTGGGCGCCTGTATCGGTGTCGGTCTTTTCCTCGGTTCGGCCAAGGCGATCGAAATGGCCGGCCCGGCCATCATGTTGTCCTACATCATCGGCGGCCTGGCCATTC‑TGGTGATCATGCGCGCCCTTGGTGa > 1:2054417/1‑150 (MQ=255) cacaTCCGCCTGATGGCGCTGGGCGCCTGTATCGGTGTCGGTCTTTTCCTCGGTTCGGCCAAGGCGATCGAAATGGCCGGCCCGGCCATCATGTTGTCCTACATCATCGGCGGCCTGGCCATTC‑TGGTGATc > 2:1462728/1‑132 (MQ=255) ccGCCTGATGGCGCTGGGCGCCTGTATCGGTGTCGGTCTTTTCCTCGGTTCGGCCAAGGCGATCGAAATGGCCGGCCCGGCCATCATGTTGTCCTACATCATCGGCGGCCTGGCCATTC‑TGGTGATCATGCGCGCCCTTGGTGAAATGGc < 2:1541094/150‑1 (MQ=255) ccGCCTGATGGCGCTGGGCGCCTGTATCGGTGTCGGTCTTTTCCTCGGTTCGGCCAAGGCGATCGAAATGGCCGGCCCGGCCATCATGATGTCCTACATCATCGGCGGCCTGGCCATTC‑TGGTGATCATGCGCGCCCTTGGTGAAATggg < 2:1656698/150‑2 (MQ=255) gCCTGATGGCGCTGGGCGCCTGTATCGGTGTCGGTCTTTTCCTCGGTTCGGCCAAGGCGATCGAAATGGCCGGCCCGGCCATCATGTTGTCCTACATCATCGGCGGCCTGGCCATTC‑Tg < 1:558653/119‑1 (MQ=255) gCCTGATGGCGCTGGGCGCCTGTATCGGTGTCGGTCTTTTCCTCGGTTCGGCCAAGGCGATCGAAATGGCCGGCCCGGCCATCATGTTGTCCTACATCATCGGCGGCCTGGCCATTC‑TGGTGATCATGCGCGCCCTTGGTGAAATGGCCg > 2:1016279/1‑150 (MQ=255) cTGATGGCGCTGGGCGCCTGTATCGGTGTCGGTCTTTTCCTCGGTTCGGCCAAGGCGATCGAAATGGCCGGCCCGGCCATCATGTTGTCCTACATCATCGGCGGCCTGGCCATTC‑TGGTGATCATGCGCGCCCTTGGTGAAATGGCCGTg > 1:839662/1‑150 (MQ=255) tGGCGCTGGGCGCCTGTATCGGTGTCGGTCTTTTCCTCGGTTCGGCCAAGGCGATCGAAATGGCCGGCCCGGCCATCATGTTGTCCTACATCATCGGCGGCCTGGCCATTC‑TGGTGATCATGCGCGCCCTTGGTGAAATGGCCGTGcaca > 2:857486/1‑150 (MQ=255) gcgcTGGGCGCCTGTATCGGTGTCGGTCTTTTCCTCGGTTCGGCCAAGGCGATCGAAATGGCCGGCCCGGCCATCATGTTGTCCTACATCATCGGCGGCCTGGCCATTC‑TGGTGATCATGCGCGCCCTTg > 1:1814300/1‑130 (MQ=255) gcTGGGCGCCTGTATCGGTGTCGGTCTTTTCCTCGGTTCGGCCAAGGCGATCGAAATGGCCGGCCCGGCCATCATGTTGTCCTACATCATCGGCGGCCTGGCCATTC‑TGGTGATCATGCGCGCCCTTGGTGAAATGGCCGTGCACAAccc > 1:1200493/1‑150 (MQ=255) cTGTATCGGTGTCGGTCTTTTCCTCGGTTCGGCCAAGGCGATCGAAATGGCCGGCCCGGCCATCATGTTGTCCTACATCATCGGCGGCCTg < 2:169300/91‑1 (MQ=255) cTGTATCGGTGTCGGTCTTTTCCTCGGTTCGGCCAAGGCGATCGAAATGGCCGGCCCGGCCATCATGTTGTCCTACATCATCGGCGGCCTg > 1:169300/1‑91 (MQ=255) cTGTATCGGTGTCGGTCTTTTCCTCGGTTCGGCCAAGGCGATCGAAATGGCCGGCCCGGCCATCATGTTGTCCTACATCATCGGCGGCCTGGCCATTC‑TGGTGATCATGCGCGCCCTTGGTGAAATGGCCGTGCACAACCCTGTCGCCgg > 1:1991813/1‑150 (MQ=255) gTATCGGTGTCGGTCTTTTCCTCGGTTCGGCCAAGGCGATCGAAATGGCCGGCCCGGCCATCATGTTGTCCTACATCATCGGCGGCCTGGCCATTC‑TGGTGATCATgc < 2:493118/108‑1 (MQ=255) gTATCGGTGTCGGTCTTTTCCTCGGTTCGGCCAAGGCGATCGAAATGGCCGGCCCGGCCATCATGTTGTCCTACATCATCGGCGGCCTGGCCATTC‑TGGTGATCATgc > 1:493118/1‑108 (MQ=255) gaTCGGTGGTGGTCTTTTCCTCGGTTCGGCCAAGGCGATCGAAATGGCCGGCCCGGCCATCATGTTGTCCTACATCATCGGCGGCCTGGCCATTC‑TGGTGATCATGCGCGCCCTTGGTGAAATGGCCGTGCACAACCCTGTCGCCGGCTc < 2:741147/149‑1 (MQ=255) gaTCGGTGCCGGTCTTTTCCTACGTTCGGCTTAGGTCGCAGATATGCCCGGCCGGGTGAGCATGTTGTCCTACATCATCGGCGGCCTGGCCATTC‑TGGTGATCATGCGCGCCCTTGGTGAAATGGCCGTGCACAACCCTGTCGCCGGCTc < 2:1232215/149‑1 (MQ=25) aTCGGTGTCAGTCTTTTCCTCGGTTCGGCCAAGGCGATCGAAATGGCCGGCCCGGCCATCATGTTGTCCTACATCATCGGCGGCCTGGCCATTC‑TGGTGATCATGCGCGCCCTTGGTGAAATGGCCGTGCACAACCCTGTCGCCGGCTCg > 1:1158468/1‑150 (MQ=255) gtCGGTCTTTTCCTCGGTTCGGCCAAGGCGATCGAAATGGCCGGCCCGGCCATCATGTTGTCCTACATCATCGGCGGCCTGGCCATTC‑TGGTGATCATGCGCGCCCTTGGTGAAATGGc < 1:1788190/119‑1 (MQ=255) gtCGGTCTTTTCCTCGGTTCGGCCAAGGCGATCGAAATGGCCGGCCCGGCCATCATGTTGTCCTACATCATCGGCGGCCTGGCCATTC‑TGGTGATCATGCGCGCCCTTGGTGAAATGGc > 2:1788190/1‑119 (MQ=255) tCGGTCTTTTCCTCGGTTCGGCCAAGGCGATCGAAATGGCCGGCCCGGCCATCATGTTGTCCTACATCATCGGCGGCCTGGCCATTC‑TGGTGATCATGCGCGCCCTTGGTGAAATGGCCGTGCACAACCCTGTCGCCGGCTCGTTCAGcc < 1:941739/150‑1 (MQ=255) gTCTTTTCCTCGGTTCGGCCAAGGCGATCGAAATGGCCGGCCCGGCCATCATGTTGTCCTACATCATCGGCGGCCTGGCCATTC‑TGGTGATCATGCGCGCCCTTGGTGAAATGGCCGTGCACAACCCTGTCGCCGGCTCGTTCAGCCGtt > 1:2274706/1‑150 (MQ=255) gTCTTTTCCTCGGTTCGGCCAAGGCGATCGAAATGGCCGGCCCGACCATCATGTTGTCCTACATCATCGGCGGCCTGGCCATTC‑TGGTGATCATGCGCGCCCTTGGTGAAATGGCCGTGCACAACCCTGTCGCCGGCTCGTTCAGCCGtt > 1:985800/1‑150 (MQ=255) ccTCGGTTCGGCCAAGGCGATCGAAATGGCCGGCCCGGCCATCATGTTGTCCTACATCATCGGCGGCCTGGCCATTC‑TGGTGATCATGCGCGCCCTTGGTGAAATGGCCGTGCACAACCCTGTCGCCGGCTCGTTCAGCCGTTATGCCCa > 1:167194/1‑150 (MQ=255) cTCGGTTCGGCCAAGGCGATCGAAATGGCCGGCCCGGCCATCATGTTGTc > 2:2386628/1‑50 (MQ=255) cTCGGTTCGGCCAAGGCGATCGAAATGGCCGGCCCGGCCATCATGTTGTc < 1:2386628/50‑1 (MQ=255) cTCGGTTCGGCCAAGGCGATCGAAATGGCCGGCCAGGCCATAATGTGCTCCTAGAGCATCGGCGGCCTGGCCATTC‑TGGTGATCATGCGCGCCCTTGGTGAAATGGCCGTGCACAACCCTGTCGCCGGCTCGTTCAGCCGTTATGCCCAg > 1:975507/1‑150 (MQ=39) cTCGGTTCGGCCAAGGCGATCGAAACGGCCGGCCCGGCCATCATGGTGTCCTACATCATCGGCGGCCTGGCCATTC‑TGGTGATCATGCGCGCCCTTGGTGAAATGGCCGTGCACAACCCTGTCGCCGGCTCGGTCAGCCGTTATGCCCAg < 2:1230317/150‑1 (MQ=255) ttCGGCCAAGGCGATCGAAATGGCCGGCCCGGCCATCATGTTGTCCTACATCATCGGCGGCCTGGCCATTC‑TGGTGATCATGCGCGCCCTTGGTGATATGGCAGCGCACATATCAAACGCCGTCCCGTGCAGCCGCTATGCCCAGGAttt > 2:1833808/1‑149 (MQ=255) cGGCCAAGGCGATCGAAATGGCCGGCCCGGCCATCATGTTGTCCTACATCATCGGCGGCCTGGCCATTC‑TGGTGATCATGCGCGCCCTTGGTGAAATGGCCGTGCACAACCCTGTCGCCGGCTCGTTCAGCCGTTATGCCCAGGATTAcc < 2:2274706/150‑1 (MQ=255) gCCAAGGCGATCGAAATGGCCGGCCCGGCCATCATGTTGTCCTACATCATCGGCGGCCTGGCCATTC‑TGGTGATCATGCGCGCCCTTGGTGAAATGGCCGTGCACAACCCTGTCGCCGGCTCGTTCAGCCGTTAt > 1:406799/1‑135 (MQ=255) gCCAAGGCGATCGAAATGGCCGGCCCGGCCATCATGTTGTCCTACATCATCGGCGGCCTGGCCATTC‑TGGTGATCATGCGCGCCCTTGGTGAAATGGCCGTGCACAACCCTGTCGCCGGCTCGTTCAGCCGTTAt < 2:406799/135‑1 (MQ=255) ccAAGGCGATCGAAATGGCCGGCCCGGCCATCATGTTGTCCTACATCATCGGCGGCCTGGCCATTC‑TGGTGATCATGCGCGCCCTTGGTGAAATGGCCGTGCACAACCCTGTCGCCGGCTCGTTCAGCCGTTATGCCCATGAGTACCTCg < 2:1487540/150‑1 (MQ=255) cAAGGCGATCGAAATGGCCGGCCCGGCCATCATGTTGTCCTACATCATCGGCGGCCTGGCCATTC‑TGGTGATCATGCGCGCCCTTGGt < 1:757286/88‑1 (MQ=255) cAAGGCGATCGAAATGGCCGGCCCGGCCATCATGTTGTCCTACATCATCGGCGGCCTGGCCATTC‑TGGTGATCATGCGCGCCCTTGGt > 2:757286/1‑88 (MQ=255) cAAGGCGATCGAAATGGCCGGCCCGGCCATCATGTTGTCCTACATCATCGGCGGCCTGGCCATTC‑TGGTGATCATGCGCGCCCTTGGTGAAATGGCCGTGCACAACCCTGTCGCCGGCTCGTTCAGCCGTTATGCCCAGGATTACCTCgg > 1:1988097/1‑150 (MQ=255) aaGGCGATCGAAATTGCCGGCCCGGCCATCATGTTGTCCTACATCATCGGCGGCCTGGCCATTC‑TGGTGATCATGCGCGCCCTTGGTGAAATGGCCGTGCACAACCCTGTCGCCGGCTCGTTCAGCCGTTATGCCCAGGATTACCTCGGc < 1:2129947/150‑1 (MQ=255) ggCGATCGAAATGGCCGGCCCGGCCATCATGTTGTCCTACATCATCGGCGGCCTGGCCATTC‑TGGTGATCATGCGCGCCCTTGGTGAAATGGCCGTGCACAACCCTGTCGCCGGCTCGTTCAGCCGTTATGCCCAGGATTACCTCGGccc > 1:750612/1‑150 (MQ=255) gCGATCGAAATGGCCGGCCCGGCCATCATGTTGTCCTACATCATCGGCGGCCTGGCCATTC‑TGGTGATCATGCGCGCCCTTGGTGAAATGGCCGTGCACAACCCTGTCGCCGGCTCGTTCAGCCGTTATGCCCAGGATTACCTCGGCCCa < 1:1683158/150‑1 (MQ=255) cGATCGAAATGGCCGGCGCGGCCATCATGTTGTCCTACATCATCGGCGGCCTGGCCATTC‑TGGTGATCATGCGCGCCCTTGGTGAAATGGCCGTGCACAACCCTGTCGCCGGCTCGTTCAGCCGTTATGCCCAGGATTACCTCGGCCCAt > 2:1236719/1‑150 (MQ=255) cGATCGAAATGGCCGGCCCGGCCATCATGTTGTCCTACATCATCGGCGGCCTGGCCATTC‑TGGTGATCATGCGCGCCCCTGGTGAAATGGCCGTGCACAACCCTGTCGCCGGCTCGTTCAGCCGTTATGCCCAGGATTACCTCGGCCCAt < 2:863494/150‑1 (MQ=255) aTCGAAATGGCCGGCCCGGCCATCATGTTGTCCTACATCATCGGCGGCCTGGCCATTC‑TGGTGATCATGCGCGCCCTTGGTGAAATGGCCGTGCACAACCCTGTCGCCGGCTCGTTCAGCCGTTATGCCCAGGATTACCTCGGCCCATTg > 1:889710/1‑150 (MQ=255) tCGAACTGGCCGGCCCGGCCATCATGTTGTCCTAGATCATCGCCAGCATGGCTATTC‑TGGTGATCATGCGCGCCCGTGGTGAAATGGCCGTGCACAACCCTGTCGCCGGCTCGTTCAGCCGTTATGCCCAGGATTACCTCGGCCCATTgg < 1:2343389/150‑1 (MQ=38) tCGAAATGGCCGGCCCGGCCATCATGTTGTCCTACATCATCGGCGGCCTGGCCATTC‑TGGTGATCATGCGCGCCCTTGGTGaaa < 1:545243/84‑1 (MQ=255) tCGAAATGGCCGGCCCGGCCATCATGTTGTCCTACATCATCGGCGGCCTGGCCATTC‑TGGTGATCATGCGCGCCCTTGGTGaaa > 2:545243/1‑84 (MQ=255) tCGAAATGGCCGGCCCGGCCATCATGTTGTCCTACATCATCGGCGGCCTGGCCATTC‑TGGTGATCATGCGCGCCCTTGGTGAAATGGCCGTGCACAACCCTGTCGCCGGCTCGTTCAGCCGTTATGCCCAGGATTACCTCGGCCCATTgg > 1:1636594/1‑150 (MQ=255) gAAATGGCCGGCCCGGCCATCATGTTGTCCTACATCATCGGCGGCCTGGCCATTC‑TGGTGATCATGCGCGCCCTTGGTGAAATGGCCGTGCACAACCCTGTCGCCGGCTCGTTCAGCCGTTATGCCCAGGATTACCTCGGc > 2:1765974/1‑141 (MQ=255) gAAATGGCCGGCCCGGCCATCATGTTGTCCTACATCATCGGCGGCCTGGCCATTC‑TGGTGATCATGCGCGCCCTTGGTGAAATGGCCGTGCACAACCCTGTCGCCGGCTCGTTCAGCCGTTATGCCCAGGATTACCTCGGc < 1:1765974/141‑1 (MQ=255) gAAATGGCCGGCCCGGCCATCATGTTGTCCTACATCATCGGCGGCCTGGCCATTC‑TGGTGATCATGCGCGCCCTTGGTGAAATGGCCGTGCACAACCCTGTCGCCGGCTCGTTCAGCCGTTATGCCCAGGATTACCTCGGCCCATTGGCg < 2:1805913/150‑1 (MQ=255) tgaTGGCCGGGCCGGCCATCATGTTGTCCTACATCATCGGCGGCCTGGCCATTC‑TGGTGATCATgcgc > 1:1700716/3‑68 (MQ=255) tgaTGGCCGGGCCGGCCATCATGTTGTCCTACATCATCGGCGGCCTGGCCATTC‑TGGTGATCATGCGCGCCCTTGGTGAAATGGCCGTGCACAACCCTGTCGCCGGCTCGTTCAGCCGTTATGCCCAGGATTACCTCGGCCCATTGGCgg > 1:1439487/3‑150 (MQ=255) aactGGCCGGCCCGGCCATCATGTTGTCCTACATCATAGCAGGAGTCGGCATACGAGATAGAAATGCGTG‑CCTGGGTGAAATGGCCGTGCACAACCCTGTCGCCGGCTCGTTCAGCCGTTATGCCCAGGATTACCTCGGCCCATTGGCgg < 1:891914/147‑1 (MQ=255) gaTGGCCGGGCCGGCCATCATGTTGTCCTACATCATCGGCGGCCTGGCCATTC‑TGGTGATCATGCGCGCCCTTGGTGAAATGGCCGTGCACAACCCTGTCGCCGGCTCGTTCAGCCGTTATGCCCAGGATTACCTCGGCCCATTGGCggg > 2:1258131/2‑150 (MQ=255) tGGCCGGGCCGGCCATCATGTTGTCCTACATCATCGGCGGCCTGGCCATTC‑TGGTGATCATGCGCGCCCTTGGTGAAATGGCCGTGCACAACCCTGTCGCCGGCTCGTTCAGCCGTTATGCCCAGGATTACCTCGGCCCATTGGCgg > 1:1438726/1‑147 (MQ=255) ccgggccggcCATCATGTTGTCCTACATCATCGGAGGCCTGGCCATTC‑TGGTGATCATGCGCGCCCTTGGTGAAATGGCCGTGCACAACCCTGTCGCCGGCTCGTTCAGCCGTTATGCCCAGGATTACCTCGGCCCATTGGCGGGCTTcc > 1:570392/1‑150 (MQ=255) | TCGGCAACCACTCTGCCCACGGCCAGGCCACTGAAGGCGGCCCGCTCAAGCGTGAACTGGGCGAACGGCACATCCGCCTGATGGCGCTGGGCGCCTGTATCGGTGTCGGTCTTTTCCTCGGTTCGGCCAAGGCGATCGAAATGGCCGGCCCGGCCATCATGTTGTCCTACATCATCGGCGGCCTGGCCATTC‑TGGTGATCATGCGCGCCCTTGGTGAAATGGCCGTGCACAACCCTGTCGCCGGCTCGTTCAGCCGTTATGCCCAGGATTACCTCGGCCCATTGGCGGGCTTCCTGAC > NC_002947/1209405‑1209702 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |