| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,239,106 | G→T | 6.4% | intergenic (‑75/‑300) | argF ← / → PP_1080 | ornithine carbamoyltransferase/molybdopterin‑binding oxidoreductase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,239,106 | 0 | G | T | 6.4% | 291.3 / 5.7 | 92 | intergenic (‑75/‑300) | argF/PP_1080 | ornithine carbamoyltransferase/molybdopterin‑binding oxidoreductase |
| Reads supporting (aligned to +/- strand): ref base G (44/42); new base T (3/3); total (47/45) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.89e-01 | |||||||||||
CGTGGCGGATCACCCCGAGCAATTCGTCGGTGGTGAAGTCCAGCAGGGAGAGAAAGTGCCTAGCGCTCATGAGTGACTACCTTATCTGCAACGGTATGCAGGTCGACCGTATGG‑TTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCTGAAGCCAAGGGGGGAAAAGCGGCGTGATTGCAAAGGGTGTTGCAAAGGGTGTCTTTACCCGTTGGCCCGTGCTGTTCTTTATTTGC > NC_002947/1238962‑1239251 | cGTGGCGGATCACCCCGAGCAATTCGTAGGTGGTGCAGTCCAGCAGGGAGAGAGATTGCCTAGCGCTCATGAGTGACTACCTTATCTGCAACGGTATGCAGGTCGACCGTATGG‑TTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGc > 1:1507282/1‑150 (MQ=255) gCGGATCACCCCGAGCAATTCGTCGGTGGTGAAGTCCAGCAGGGAGAGAAAGTGCCTAGCGCTCATGAGTGACTACCTTATCTGCAACGGTATGCAGGTCGACCGTATGG‑TTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCa < 1:1767002/150‑1 (MQ=255) cGGATCACCCCGAGCAATTCGTCGGTGGTGAAGTCCAGCAGGGAGAGAAAGTGCCTAGCGCTCATGAGTGACTACCTTATCTGCAACGGTATGCAGGTCGACCGTATGG‑TTTTTTTTGACAACGGGGGTGACCTGCGGCTTACGCCGCag < 2:474649/150‑2 (MQ=255) aTCACCCCGAGCAATTCGTCGGTGGTGAAGTCCAGCAGGGAGAGAAAGTGCCTAGCGCTCATGAGTGACTACCTTATCTGCAACGGTATGCAGGTCTACTGTATGG‑TTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACggg < 1:1979202/150‑1 (MQ=255) ccccGAGCAATTCGTCGGTGGTGAAGTCCAGCAGGGAGAGAAAGTGCCTAGCGCTCATGAGTGACTACCTTATCTGCAACGGTATGCAGGTCGACCGTATGG‑TTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCgg > 1:2280645/1‑150 (MQ=255) ccccGAGCAATTCGTCGGTGGTGAAGTCCAGCAGGGAGAGAAAGTGCCTAGCGCTCATGAGTGACTACCTTATCTGCAACGGTATGCAGGTCGACCGTATGG‑TTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCgg > 1:2026597/1‑150 (MQ=255) ccccGAGCAATTCGTCGGTGGTGAAGTCCAGCAGGGAGAGAAAGTGCCTAGCGCTCATGAGTGACTACCTTATCTGCAACGGTATGCAGGTCGACCGTATGG‑TTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCgg > 1:1288189/1‑150 (MQ=255) cccGAGCAATTCGTCGGTGGTGAAGTCCAGCAGGGAGAGAAAGTGCCTAGCGCTCATGAGTGACTACCTTATCTGCAACGGTATGCAGGTCGACCGTATGG‑TTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGa < 2:1288189/150‑1 (MQ=255) cccGAGCAATTCGTCGGTGGTGAAGTCCAGCAGGGAGAGAAAGTGCCTAGCGCTCATGAGTGACTACCTTATCTGCAACGGTATGCAGGTCGACCGTATGG‑TTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGa < 2:2129881/150‑1 (MQ=255) cccGAGCAATTCGTCGGTGGTGAAGTCCAGCAGGGAGAGAAAGTGCCTAGCGCTCATGAGTGACTACCTTATCTGCAACGGTATGCAGGTCGACCGTATGG‑TTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGa < 1:479029/150‑1 (MQ=255) cccGAGCAATTCGTCGGTGGTGAAGTCCAGCAGGGAGAGAAAGTGCCTAGCGCTCATGAGTGACTACCTTATCTGCAACGGTATGCAGGTCGACCGTATGG‑TTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGa < 2:2280645/150‑1 (MQ=255) ccGAGCAATTCGTCGGTGGTGAAGTCCAGCAGGGAGAGAAAGTGCCTAGCGCTCATGAGTGACTACCTTATCTGCAACGGTATGCAGGTCGACCGTATGG‑TTTTTTTTGACAACGGGGGTGACCTGCGGCTTACGCCGCag > 2:1794358/1‑140 (MQ=255) ccGAGCAATTCGTCGGTGGTGAAGTCCAGCAGGGAGAGAAAGTGCCTAGCGCTCATGAGTGACTACCTTATCTGCAACGGTATGCAGGTCGACCGTATGG‑TTTTTTTTGACAACGGGGGTGACCTGCGGCTTACGCCGCag < 1:1794358/141‑2 (MQ=255) ccGAGCAATTCGTCGGTGGTGAAGTCCAGCAGAAACCGAAAGTGCCTAGCGCTCATGAGTGACTACCTTATCTGCAACGGTATGCAGGTCGACCGTATGG‑TTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGag > 1:1396425/1‑149 (MQ=255) cGAGCAATTCGTCGGTGGTGAAGTCCAGCAGGGAGAGAAAGTGCCTAGCGCTCATGAGTGACTACCTTATCTGCAACGGTATGCAGGTCGACCGTATGG‑TTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACg > 1:2304259/1‑150 (MQ=255) cGAGCAATTCGTCGGTGGTGAAGTCCAGCAGGGAGAGAAAGTGCCTAGCGCTCATGAGTGACTACCTTATCTGCAACGGTATGCAGGTCGACCGTATGG‑TTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACg > 1:553448/1‑150 (MQ=255) cGAGCAATTCGTCGGTGGTGAAGTCCAGCAGGGAGAGAAAGTGCCTAGCGCTCATGAGTGACTACCTAATCGTCAACGGTATGGATGTAGACCGTATGG‑TTGTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACg > 1:1374380/1‑150 (MQ=255) gCAATTCGTCGGTGGTGAAGTCCAGCAGGGAGAGAAAGTGCCTAGCGCTCATGAGTGACTACCTTATCTGCAACGGTATGCAGGTCGACCGTATGG‑TTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGaaa < 2:1003894/150‑1 (MQ=255) cAATTCGTCGGTGGTGAAGTCCAGCAGGGAGAGAAAGTGCCTAGCGCTCATGAGTGACTACCTTATCTGCAACGGTATGCAGGTCGACCGTATGG‑TTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGa < 1:132681/144‑1 (MQ=255) cAATTCGTCGGTGGTGAAGTCCAGCAGGGAGAGAAAGTGCCTAGCGCTCATGAGTGACTACCTTATCTGCAACGGTATGCAGGTCGACCGTATGG‑TTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGa > 2:132681/1‑144 (MQ=255) ttCGTCGGTGGTGAAGTCCAGCAGGGAGAGAAAGTGCCTAGCGCTCATGAGTGACTACCTTATCTGCAACGGTATGCAGGTCGACCGTATGG‑TTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAgg > 2:761841/1‑150 (MQ=255) ttCGTCGGTGGTGAAGTCCAGCAGGGAGAGAAAGTGCCTAGCGCTCATGAGTGACTACCTTATCTGCAACGGTATGCAGGTCGACCGTATGG‑TTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAgg < 2:166864/150‑1 (MQ=255) gcgGTGGTGAAGTCCAGCAGGGAGAGAAAGTGCCTAGCGCTCATGAGTGACTACCTTATCTGCAACGGTATGCAGGTCGACCGTATGG‑TTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGaaa < 2:1507282/149‑1 (MQ=255) cgGTGGTGAAGTCCAGCAGGGAGAGAAAGTGCCTAGCGCTCATGAGTGACTACCTTATCTGCAACGGTATGCAGGTCGACCGTATGG‑TTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAg < 1:1803379/150‑1 (MQ=255) cgaggtgAAGTCCAGCTGTGAGAGTAAGTTCCTAGCGTTCATGAGTGACTACCTTATCTGCAACGGTATGCAGGTCGGCCGTAAGG‑TTTTTTGTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAgg < 2:137969/147‑1 (MQ=255) gggtgAAGTCCAGCAGGGAGAGAAAGGGCCTAGCGCGCATGAGTGACTAGCTTATCTGCAACGGTATGCAGGTCGACCGTATGG‑TTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGgcg < 2:526719/149‑1 (MQ=255) gtgAAGTCCAGCAGGGAGAGAAAGTGCCTAGCGCTCATGAGTGACTACCTTATCTGCAACGGTATGCAGGTCGACCGTATGG‑TTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCa > 1:480484/1‑150 (MQ=255) aaGTCCAGCAGGGAGAGAAAGTGCCTAGCGCTCATGAGTGACTACCTTATCTGCAACGGTATGCAGGGCGACTGTATGG‑CATTTTTTGAGAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAACTCGGGAAGGGCGCAATa > 1:1977410/1‑150 (MQ=255) ccAGCAGGGAGAGAAAGTGCCTAGCGCTCATGAGTGACTACCTTATCTGCAACGGTATGCAGGTCGACCGTATGG‑TTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACtat < 2:553448/150‑1 (MQ=255) agcagGGAGAGAAAGTGCCTAGCGCTCATGAGTGACTACCTTATCTGCAACGGTATGCAGGTCGACCGTATGG‑TTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACtata < 2:2395909/149‑1 (MQ=255) agcagGGAGAGAAAGTGCCTAGCGCTCATGAGTGACTACCTTATCTGCAACGGTATGCAGGTCGACCGTATGG‑TTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACtata > 1:2395909/1‑149 (MQ=255) agcagGGAGAGAAAGTGCCTAGCGCGCATGGGTGACTACCTTATCTGCAACGGTATGCAGGTCGACCGTATGG‑TTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATaa < 2:1374380/150‑1 (MQ=255) gggAGAGAAAGTGCCTTGCGCTCATGAGTAACTCCCTTGTCTGCAACGGTATGCAGGTCGACCGTATGG‑TTTTTTTTGACAACGGGGGTGACCGGCGGCGTAAGCCGCACGCGGAGGACGAAATAGGGAAAGGCGCCATACTATAAGTaa < 2:1396425/150‑1 (MQ=255) ggAGAGAAAGTGCCTAGCGCTCATGAGTGACTACCTTATCTGCAACGGTATGCAGGTCGACCGTATGG‑TTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGaaa < 2:1204650/130‑1 (MQ=255) ggAGAGAAAGTGCCTAGCGCTCATGAGTGACTACCTTATCTGCAACGGTATGCAGGTCGACCGTATGG‑TTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGaaa > 1:1204650/1‑130 (MQ=255) gagagaAAGTGCCTAGCGCTCATGAGTGACTACCTTATCTGCAACGGTATGCAGGTCGACCGTATGG‑TTTTTTTTTATATCGGGGGTGACATATGGCGTAAATCGCACGGGCCGGACGAAATAGGGAAAGGCGCCATACTATATGTAAAt > 2:392383/1‑150 (MQ=255) gagagaAAGTGCCTAGCGCTCATGAGTGACTACCTTATCTGCAACGGTATGCAGGTCGACCGTATGG‑TTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAAt > 2:1894628/1‑150 (MQ=255) agaAAGTGCCTAGCGCTCATGAGTGACTACCTTATCTGCAACGGTATGCAGGTCGACCGTATGGTTTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGt > 1:416062/1‑150 (MQ=255) aaaGTGCCTAGCGCTCATGAGTGACTACCTTATCTGCAACGGTATGCAGGTCGACCGTATGG‑TTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGc > 1:223814/1‑150 (MQ=255) gTGCCTAGCGCTCATGAGTGACTACCTTATCTGCAACGGTATGCAGGTCGACCGTATGG‑TTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCTg > 2:1061343/1‑150 (MQ=255) gCCTAGCGCTCATGAGTGACTACCTTATCTGCAACGGTATGCAGGTCGACCGTATGG‑TTTTTTTTGGATCTAGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCTGaa < 1:761841/150‑1 (MQ=255) ccTAGCGCTCATGAGTGACTACCTTATCTGCAACGGTATGCAGGTCGACCGTATGG‑TTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGc < 2:2297923/102‑1 (MQ=255) ccTAGCGCTCATGAGTGACTACCTTATCTGCAACGGTATGCAGGTCGACCGTATGG‑TTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGc > 1:2297923/1‑102 (MQ=255) cTAGCGCTCATGAGTGACTACCTTATCTGCAACGGTATGCAGGTCGACCGTATGG‑TTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCTGAAGc > 2:1360791/1‑150 (MQ=255) tAGCGCTCATGAGTGACTACCTTATCTGCAACGGTATGCAGGTCGACCGTATGG‑TTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCTGAAGcc > 1:1878340/1‑150 (MQ=255) aGCGCTCATGAGTGACTACCTTATCTGCAACGGTATGCAGGTCGACCGTATGG‑TTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCTGAAGCCa > 2:1224059/1‑150 (MQ=255) cTCATGAGTGACTACCTTATCTGCAACGGTATGCAGGTCGACCGTATGG‑TTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCTGAAGCCAAggg > 2:1321793/1‑150 (MQ=255) aTGAGTGACTACCTTATCTGCAACGGTATGCAGGTCGACCGTATGG‑TTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCTGAAGCCAAgggggg > 1:17296/1‑150 (MQ=255) tGAGTGACTACCTTATCTGCAACGGTATGCAGGTCGACCGTATGG‑TTTTTTTTGACAATGGGGGTGACATGCGGCGTAAGCTGCACGGGGCGGATGAAATAGGGAAAGGCGCAATAATATAAGTAAATGTCGCCTGAAGCAAAGGGGGGa > 2:659948/1‑150 (MQ=255) gAGTGACTACCTTATCTGCAACGGTATGCAGGTCGACCGTATGG‑TTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCTGAAGCCAAGGGGGGaa > 1:318642/1‑150 (MQ=255) tGACTACCTTATCTGCAACGGTATGCAGGTCGACCGTATGG‑TTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCTGAAGCCAAGGGGGGAAAAg < 1:1085131/150‑1 (MQ=255) tACCTTATCTGCAACGGTATGCAGGTCGACCGTATGG‑TTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCTGAAGCCAAGGGGGGAAAAgcggc < 2:223814/150‑1 (MQ=255) caCCTTCTCTGCTCCGGTATGCGGATACGCAGTATGG‑GTTTTTTTGAGCACGGGGGCGACCTTCTGGTTATGCAGCAGAGTGAGGAAGAAATAGGGAAAGTCGAAATACTATAAGTAAATGTCTCCTGTAGCCAAAGGGGGAAAAgcgag < 2:327479/149‑3 (MQ=255) aCCTTATATGCAACGGTATGCAGGTAGTCCGTATGG‑TTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCTGAAGCCAAGGGGGGAAAAgcggcg < 1:392383/150‑1 (MQ=255) ccTTATCTGCAACGGTATGCAGGTCGACCGTATGG‑TTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGaaa > 2:980499/1‑89 (MQ=255) ccTTATCTGCAACGGTATGCAGGTCGACCGTATGG‑TTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGaaa < 1:980499/89‑1 (MQ=255) cTTATCTGCAACGGTATGCAGGTCGACCGTATGG‑TTTTTTTTGTTTTCGGTGTTTACTTTCGGCGTATGCTTCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCTGAAGCCAAGGGGGGAAAAGCGGCGTg > 2:1939548/1‑150 (MQ=255) ttATCTGCAACGGTATGCAGGTCGACCGTATGG‑TTTTTTTTGTCAACGGGTGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGACATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCTGAAGCCAAGCGGGGAAACGCGGCGTGa > 2:119835/1‑150 (MQ=255) ttATCTGCAACGGTATGCAGGTCGACCGTATGG‑TTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATaa < 2:2010001/110‑1 (MQ=255) ttATCTGCAACGGTATGCAGGTCGACCGTATGG‑TTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATaa > 1:2010001/1‑110 (MQ=255) gaaCGGTATGCAGGTCGACCGTATGG‑TTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCTGAAGCCAAGGGGGGAAAAGCGGCGTGAttgcaaa < 1:604993/149‑1 (MQ=255) aCGGTATGCAGGTCGACCGTATGG‑TTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCTGAAGCCAAGGGGGGAAAAGCGGCGTGAttgcaaagg < 2:17296/150‑1 (MQ=255) cGGTATGCAGGTCGACCGTATGG‑TTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCTGAAGCCAAGGGGGGAAAAGCGGCGTGAttgcaaaggg < 1:1360791/150‑1 (MQ=255) gTATGCAGGTCGACCGTATGG‑TTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCTGAAGCCAAGGGGGGAAAAGCGGCGTGAttgcaaagggtg > 2:250562/1‑150 (MQ=255) aTGCAGGTCGACCGTATGG‑TTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCTGAAGCCAAGGGGGGAAAAGCGGCGTGAttgcaaagggtgtt < 2:480484/150‑1 (MQ=255) aTGCAGGTCGACCGTATGG‑TTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCTGAAGCCAAGGGGGGAAAAGCGGCGTGAttgcaaagggtgtt < 2:1878340/150‑1 (MQ=255) aTGCAGGTCGACCGTATGG‑TTTTTTTTGACAACGGGGGTGACCTGCGGCGGAAGCCGCACGGGGCGGACAAAAAAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCTGAAGCCAAGGGGGGAAAAGCGGCGTGAttgcaaagggtgtt < 2:82443/150‑1 (MQ=255) gCAGGTCGACCGTATGG‑TTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCTGAAGCCAAGGGGGGAAAAGCGGCGTGAttgcaaagggtgttgc < 1:1224059/150‑1 (MQ=255) gCAGGTCGACCGTATGG‑TTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCTGAAGCCAAGGGGGGAAAAGCGGCGTGAttgcaaagggtgttgc > 1:260027/1‑150 (MQ=255) cAGGTCGACCGTATGG‑TTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCTGaa < 1:584027/109‑1 (MQ=255) cAGGTCGACCGTATGG‑TTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCTGaa > 2:584027/1‑109 (MQ=255) ggTCGACCGTATGG‑TTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCTGAAGCCAAGGGGGGAAAAGCGGCGTGAttgcaaagggtgttgcaaa > 1:1362287/1‑150 (MQ=255) ggTCGACCGTATGG‑TTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCTGAAGCCAAGGGGGGAAAAGCGGCGTGAttgcaaagggtgttgcaaa < 1:766271/150‑1 (MQ=255) gTCGACCGTATGG‑TTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCTGAAGCCAAGGGGGGAAAAGCGGCGTGAttgcaaagggtgttgcaaag > 1:2373179/1‑150 (MQ=255) tCGACCGTATGG‑TTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCTGAAGCCAAGGGGGGAAAAGCGGCGTGAttgcaaagggtgttgcaaagg < 1:1061343/150‑1 (MQ=255) ccGTATGG‑TTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCTGAAGCCAAGGGGGGAAAAGCGGCGTGATtgcaaagggtgttgcaaagggtgt < 2:1977410/150‑1 (MQ=255) gTATGG‑TTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCTGAAGCCAAGGGGGGAAAAGCGGCGTGATTGCAAAGGGTGTTGCAAAGGGTGTCt < 2:318642/150‑1 (MQ=255) gg‑TTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCTGAAGCCAAGGGGGGAAAAGCGGCGTGATTGCAAAGGGTGTTGCAAAGGGTGTCTTTAc < 2:1362287/150‑1 (MQ=255) g‑TTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCTGAAGCCAAGGGGGGAAAAGCGGCGTGAttgcaaagggtgttgcaaagggt < 1:1800301/141‑1 (MQ=255) g‑TTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCTGAAGCCAAGGGGGGAAAAGCGGCGTGAttgcaaagggtgttgcaaagggt > 2:1800301/1‑141 (MQ=255) g‑TTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCTGAAGCCAAGGGGGGAAAAGCGGCGTGATTGCAAAGGGTGTTGCAAAGGGTGTCTTTAcc > 1:1669851/1‑150 (MQ=255) ttttttttGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCTGAAGCCAAGGGGGGAAAAGCGGCGTGATTGCAAAGGGTGTTGCAAAGGGTGTCTTTAccc > 1:1234838/1‑150 (MQ=255) cGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCTGAAGCCAAGGGGGGAAAAGCGGCGTGATTGCAAAGGGTGTTGCAAAGGGTGTCTTTACCCGTTGGCCCGTGCt < 2:2373179/150‑1 (MQ=255) gggggTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCTGAAGCCAAGGGGGGAAAAGCGGCGTGATTGCAAAGGGTGTTGCAAAGGGTGTCTTTAACCGTTGGCCCGTGCTg > 1:270704/1‑150 (MQ=255) gggTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCTGAAGCCAAGGGGGGAAAAGCGGCGt > 2:1381219/1‑99 (MQ=255) gggTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCTGAAGCCAAGGGGGGAAAAGCGGCGt < 1:1381219/99‑1 (MQ=255) ggTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCTGAAGCCAAGGGGGGAAAAGCGGCGTGATTGCAAAGGGTGTTGCAAAGGGTGTCTTTATCCGTTGGCCCGTGCTGTTc > 1:123983/1‑150 (MQ=255) ccccgtGCGGCTTACGCCGCAGGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCTGAAGCCAAGGGGGGAAAAGCGGCGTGATTGCAAAGGGTGTTGCAAAGGGTGTCTTTACCCGTTGGCCCGTGCTGTTCtt > 2:1158034/6‑150 (MQ=255) gACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCTGAAGCCAAGGGGGGAAAAGCGGCGTGATTGCAAAGGGTGTTGCAAAGGGTGTCTTTACCCGTTGGCCCGTGCTGTTCttt < 2:260027/150‑1 (MQ=255) cgtGCGGCTTACGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCTGAAGCGAAGGGGGGGAAAGCGGCGTGATTGCAAAGGGTGTTGCAAAGGGTGTCTTTACCCGTTGGCCCGTGCTGTTCATTAt > 1:191204/3‑150 (MQ=255) cTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCTGAAGCCAAGGGGGGAAAAGCGGCGTGATTGCAAAGGGTGTTGCAAAGGGTGTCTTTACCCGTTGGCCCGTGCTGTTCTTTAtt > 1:530357/1‑150 (MQ=255) cTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCTGAAGCCAAGGGGGGAAAAGCGGCGTGATTGCAAAGGGTGTTGCAAAGGGTGTCTTTACCCGTTGGCCCGTGCTGTTCTTTAtt > 2:1203818/1‑150 (MQ=255) gcggcgTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCTGAAGCCAAGGGGGGAAAAGCGGCGTGATTGCAAAGGGTGTTGCAAAGGGTGTCTTTACCCGTTGGCCCGTGCTGTTCTTTATTTg > 1:339812/1‑150 (MQ=255) cggctTACGCCGCAGGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCTGAAGCCAAGGGGGGAAAAGCGGCGTGATTGCAAAGGGTGTTGCAAAGGGTGTCTTTACCCGTTGGCCCGTGCTGTTCTTTATTTGc < 1:1158034/150‑1 (MQ=255) cggcgTAAGCCTCACGGTGCCGTCGTAATATGGTAAGGCGGAATACTATAAGTAAATGTCGCCTGAAGCCAAGGGGGGAAAAGCGGCGTTAGTGCAATTGTTGTTTCAAAGGGTGTCTTTACCCGTTGGCCCGTGCTGTTCTTTAttttc < 2:17169/150‑3 (MQ=255) cggcgTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCTGAAGCCAAGGGGGGAAAAGCGGCGTGATTGCAAAGGGTGTTGCAAAGGGTGTCTTTACCCGTTGGCCCGTGCTGTTCTTTATTTGc < 1:1674869/150‑1 (MQ=255) gTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCTGAAGCCAAGGGGGGAAAAGCGGCGTGATTGCAAAGGGTGTTGCAAAGGGTGTCTTTACCCGTTGGCCCGTGCTGTTCTTTAt > 1:2103215/1‑142 (MQ=255) gTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCTGAAGCCAAGGGGGGAAAAGCGGCGTGATTGCAAAGGGTGTTGCAAAGGGTGTCTTTACCCGTTGGCCCGTGCTGTTCTTTAt < 2:2103215/142‑1 (MQ=255) | CGTGGCGGATCACCCCGAGCAATTCGTCGGTGGTGAAGTCCAGCAGGGAGAGAAAGTGCCTAGCGCTCATGAGTGACTACCTTATCTGCAACGGTATGCAGGTCGACCGTATGG‑TTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCTGAAGCCAAGGGGGGAAAAGCGGCGTGATTGCAAAGGGTGTTGCAAAGGGTGTCTTTACCCGTTGGCCCGTGCTGTTCTTTATTTGC > NC_002947/1238962‑1239251 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |