Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 151,065 T→A 5.7% intergenic (‑116/+16) PP_0142 ← / ← PP_0143 ABC transporter permease/membrane protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_002947151,0650TA 5.7% 280.6 / 6.3 87intergenic (‑116/+16)PP_0142/PP_0143ABC transporter permease/membrane protein
Reads supporting (aligned to +/- strand):  ref base T (44/38);  new base A (3/2);  total (47/40)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.03e-01

CAGGGTGGCGCTGGGGTTGGTCATAGGCTCCATGCAATTGACTCGGCGCTAAGGCTTAGGGGCTGATCATAGCGCAGGGGGCATGGGCTGTTTGGTGATTATGTGCTGTGTGTACGCTTGGCAACAGTGACCTGCAGCCGCCTTGTGCTGCGCAAGGCAGGGGGTCAACTACCCGCGGGGGCATCATTGACCACCTTGAACCGCAGCACGCCGATCACTTGCCCATCCTCGGTCAGCACCCTCACCTGCCACTTGCCTACCGGGTTGGGCGGGAAGTTCTGCTTGTGGGTCCAGGC  >  NC_002947/150917‑151212
                                                                                                                                                    |                                                                                                                                                   
cAGGGTGGCGCTGGGGTTGGTCATAGGCTCCATGCAATTGACTCGGCGCTAAGGCTTAGGGGCTGATCATAGCGCAGGGGGCATGGGCTGTTTGGTGATTATGTGCTGTGTGTACGCTTGGCAACAGTGACCTGCAGCCGCCTTGtgctg                                                                                                                                                    >  1:2254689/1‑150 (MQ=255)
cAGGGTGGCGCTGGGGTTGGTCATAGGCTCCATGCAATTGACTCGGCGCTAAGGCTTAGGGGCTGATCATAGCGCACGGGGCATGGGCTGTTTGGTGATTATGTGCTGTGTGTACTCTGGGCAACAGTGACCTGCAGCCGCCTTGtgctg                                                                                                                                                    >  1:1738150/1‑150 (MQ=255)
    gTGGCGCTGGGGTTGGTCATAGGCTCCATGCAATTGACTCGGCGCTAAGGCTTAGGGGCTGATCATAGCGCAGGGGGCATGGGCTGTTTGGTGATTATGTGCTGTGTGTACGCTTGGCAACAGTGACCTGCAGCCGCCTTGTGCTGCGCa                                                                                                                                                >  2:227519/1‑150 (MQ=255)
        cgcTGGGGTTGGTCATAGGCTCCATGCAATTGACTCGGCGCTAAGGCTTAGGGGCTGATCATAGCGCAGGGGGCATGGGCTGTTTGGTGATTATGTGCTGTGTGTACGCTTGGCAACAGTGACCTGCAGCCGCCTTGTGCTGCGCAAGGc                                                                                                                                            <  1:822330/150‑1 (MQ=255)
         gcTGGGGTTGGTCATAGGCTCCATGCAATTGACTCGGCGCTAAGGCTTAGGGGCTGATCATAGCGCAGGGGGCATGGGCTGTTTGGTGATTATGTGCTGTGTGTACGCTTGGCAACAGTGACCTGCAGCCGCCTTGTGCTGCGCAAGGCa                                                                                                                                           >  2:2047301/1‑150 (MQ=255)
         gcTGGGGTTGGTCATAGGCTCCATGCAATTGACTCGGCGCTAAGGCTTAGGGGCTGATCATAGCGCAGGGGGCATGGGCTGTTTGGTGATTATGTGCTGTGTGTACGCTTGGCAACAGTGACCTGCAGCCGCCTTGTGCTGCGCAAGGCa                                                                                                                                           >  2:2033181/1‑150 (MQ=255)
         gcTGGGGTTGGTCATAGGCTCCATGCAATTGACTCGGCGCTAAGGCTTAGGGGCTGATCATAGCGCAGGGGGCATGGGCTGTTTGGTGATTATGTGCTGTGTGTACGCTTGGCAACAGTGACCTGCAGCCGCCTTGCGCAGCACAAGGcg                                                                                                                                           <  2:370023/150‑2 (MQ=255)
          cTGGGTTTGGTTCTAGGCTCTATGCAATTGTCTCGGCGCTAGGGGTTAGGGGCTGATCATAGCGCAGGGGGCATGGGCTGTTTGTTGATTATGTGCTGTGTGGACGCTTGGCAACAGTGACCTGCAGCTGCCTTGTGCTGCGCAAGGCAg                                                                                                                                          <  2:545625/150‑1 (MQ=255)
           tGGGGTTGGTCATAGGCTCCATGCAATTGACTCGGCGCTAAGGCTTAGGGGCTGATCATAGCGCAGGGGGCATGGGCTGTTTGGTGATTATGTGCTGTGTGTACGCTTGGCAACAGTGACCTGCAGCCGCCTTGTGCTGCGCAAGGCAgg                                                                                                                                         >  2:2375068/1‑150 (MQ=255)
                    tCATAGGCTCCATGCAATTGACTCGGCGCTAAGGCTTAGGGGCTGATCATAGCGCAGGGGGCATGGGCTGTTTGGTGATTATGTGCTGTGTGTACGCTTGGCAACAGTGACCTGCAGCCGCCTTGTGCTGCGCAAGGCAGGGGGTCAACt                                                                                                                                <  1:851425/150‑1 (MQ=255)
                       tAGGCTCCATGCAATTGACTCGGCGCTAAGGCTTAGGGGCTGATCATAGCGCAGGGGGCATGGGCTGTTTGGTGATTATGTGCTGTGTGTACGCTTGGCAACAGTGACCTGCAGCCGCCTTGTGCTGCGCAAGGCAGGGGGTCAACTAcc                                                                                                                             >  1:829195/1‑150 (MQ=255)
                        aGGCTCCATGCAATTGACTCGGCGCTAAGGCTTAGGGGCTGATCATAGCGCAGGGGGCATGGGCTGTTTGGTGATTATGTGCTGTGTGTACGCTTGGCAACAGTGACCTGCAGCCGCCTTGTGCTGCGCAAGGCAGGGGGTCAACTAccc                                                                                                                            <  1:2047301/150‑1 (MQ=255)
                          gCTCCATGCAATTGACTCGGCGCTAAGGCTTAGGGGCTGATCATAGCGCAGGGGGCATGGGCTGTTTGGTGATTATGTGCTGTGTGTACGCTTGGCAACAGTGACCTGCAGCCGCCTTGTGCTGCGCAAGGCAGGGGGTCAACTACCcgc                                                                                                                          >  1:1205510/1‑150 (MQ=255)
                           cTCCATGCAATTGACTCGGCGCTAAGGCTTAGGGGCTGATCATAGCGCAGGGGGCATGGGCTGTTTGGTGATTATGTGCTGTGTGTACGCTTGGCAACAGTGACCTGCAGCCGCCTTGTGCTGCGCAAGGCAGGGGGTCaa                                                                                                                                  >  2:610309/1‑141 (MQ=255)
                           cTCCATGCAATTGACTCGGCGCTAAGGCTTAGGGGCTGATCATAGCGCAGGGGGCATGGGCTGTTTGGTGATTATGTGCTGTGTGTACGCTTGGCAACAGTGACCTGCAGCCGCCTTGTGCTGCGCAAGGCAGGGGGTCaa                                                                                                                                  <  1:610309/141‑1 (MQ=255)
                           cTCCATGCAATTGACTCGGCGCTAAGGCTTAGGGGCTGATCATAGCGCAGGGGGCATGGGCTGTTTGGTGATTATGTGCTGTGTGTACGCTTGGCAACAGTGACCTGCAGCCGCCTTGTGCTGCGCAAGGCAGGGGGTCAACTACCcgcg                                                                                                                         <  1:2375068/150‑1 (MQ=255)
                            tCCATGCAATTGACTCGGCGCTAAGGCTTAGGGGCTGATCATAGCGCAGGGGGCATGGGCTGTTTGGTGATTATGTGCTGTGTGTACGCTTGGCAACAGTGACCTGCAGCCGCCTTGTGCTGCGCAAGGCAGTGGGTCAACTACCCGCgg                                                                                                                        >  2:1346375/1‑150 (MQ=255)
                                   aaTTGACTCGGCGCTAAGGCTTAGGGGCTGATCATAGCGCAGGTGGCATGGGCTGTTTGGTGATTATGTGCTGTGTGTACGCTTGGCAACAGTGACCTGCAGCCGCCTTGtgctgc                                                                                                                                                   <  1:2097369/116‑1 (MQ=255)
                                   aaTTGACTCGGCGCTAAGGCTTAGGGGCTGATCATAGCGCAGGGGGCATGGGCTGTTTGGTGATTATGTGCTGTGTGTACGCTTGGCAACAGTGACCTGCAGCCGCCTTGtgctgc                                                                                                                                                   >  2:2097369/1‑116 (MQ=255)
                                   aaTTGACTCGGCGCTAAGGCTTAGGGGCTGATCATAGCGCAGGGGGCATGGGCTGTTTGGTGATTATGTGCTGTGTGTACGCTTGGCAACAGTGACCTGCAGCCGCCTTGTGCTGCGCAAGGCAGGGGGt                                                                                                                                     >  2:608497/1‑130 (MQ=255)
                                   aaTTGACTCGGCGCTAAGGCTTAGGGGCTGATCATAGCGCAGGGGGCATGGGCTGTTTGGTGATTATGTGCTGTGTGTACGCTTGGCAACAGTGACCTGCAGCCGCCTTGTGCTGCGCAAGGCAGGGGGt                                                                                                                                     <  1:608497/130‑1 (MQ=255)
                                      tGACTCGGCGCTAAGGCTTAGGGGCTGATCATAGCGCAGGGGGCATGGGCTGTTTGGTGATTATGTGCTGTGTGTACGCTTGGCAACAGTGACCTGCAGCCGCCTTGTGCTGCGCAAGGCAGGGGGTCAACTACCCGCGGGGGCATCAtt                                                                                                              <  2:1608535/150‑1 (MQ=255)
                                         cTCGGCGCTAAGGCTTAGGGGCTGATCATAGCGCAGGGGGCATGGGCTGTTTGGTGATTATGTGCTGTGTGTACGCTTGGCAACAGTGACCTGCAGCCGCCTTGTGCTGCGCAAGGCAGGGGGTCAACTACCCGCGGGGGCATCATTGac                                                                                                           <  1:226720/150‑1 (MQ=255)
                                          tCGGCGCTAAGGCTTAGGGGCTGATCATAGCGCAGGGGGCATGGGCTGTTTGGTGATTATGTGCTGTGTGTACGTTTGGCAACAGTGACCTGCAGCCGCCTTGTGCTGCGCAAGGCAGGGGGTCAACTACCCGCGGGGGCATCATTGacc                                                                                                          >  2:2308547/1‑150 (MQ=255)
                                          tCGGCGCTAAGGCTTAGGGGCTGATCATAGCGCAGGGGGCATGGGCTGTTCGGTGATTATGTGCTGTGTGTACGCTTGGCAACAGTGACCTGCAGCCGCCTTGTGCTGCGCAAGGCAGGGGGTCAACTACCCGCGGGGGCATCATTGacc                                                                                                          >  2:1542179/1‑150 (MQ=255)
                                            ggCGCTAAGGCTTAGGGGCTGATCATAGCGCAGGGGGCATGGGCTGTTTGGTGATTATGTGCTGTGTGTACGCTTGGCAACAGTGACCTGCAGCCGCCTTGTGCTGCGCAAGGCAGGGGGTCAACTACCCGCGGGGGCATCATTGaccac                                                                                                        >  2:844842/1‑150 (MQ=255)
                                            ggCGCTAAGGCTTAGGGGCTGATCATAGCGCAGGGGGCATGGGCTGTTTGGTGATTATGTGCTGTGTGTACGCTTGGCAACAGTGACCTGCAGCCGCCTTGTGCTGCGCAAGGCAGCGGGTCAACTACCCGCGGCGGCATCATTGaccac                                                                                                        <  2:1971212/150‑1 (MQ=255)
                                             gcgcTAAGGCTTAGGGGCTGATCATAGCGCAGGGGGCATGGGCTGTTTGGTGATTATGTGCTGTGTGTACGCTTGGCAACAGTGACCTGCAGCCGCCTTGTGCTGCGCAAGGCAgg                                                                                                                                         >  1:1344102/1‑116 (MQ=255)
                                             gcgcTAAGGCTTAGGGGCTGATCATAGCGCAGGGGGCATGGGCTGTTTGGTGATTATGTGCTGTGTGTACGCTTGGCAACAGTGACCTGCAGCCGCCTTGTGCTGCGCAAGGCAgg                                                                                                                                         <  2:1344102/116‑1 (MQ=255)
                                               gcTAAGGCTTAGGGGCTGATCATAGCGCAGGGGGCATGGGCTGTTTGGTGATTATGTGCTGTGTGTACGCTTGGCAACAGTGACCTGCAGCCGCCTTGTGCTGCGCaa                                                                                                                                               >  1:1820157/1‑108 (MQ=255)
                                               gcTAAGGCTTAGGGGCTGATCATAGCGCAGGGGGCATGGGCTGTTTGGTGATTATGTGCTGTGTGTACGCTTGGCAACAGTGACCTGCAGCCGCCTTGTGCTGCGCaa                                                                                                                                               <  2:1820157/108‑1 (MQ=255)
                                                     gCTTAGGGGCTGATCATAGCGCAGGGGGCATGGGCTGTTTGGTGATTATGTGCTGTGTGTACGCTTGGCAACAGTGACCTGCAGCCGCCTTGTGCTGCGCAAGGCAGGGGGTCAACTACCCGCGGGGGCATCATTGACCACCTTGAACCg                                                                                               >  2:2024413/1‑150 (MQ=255)
                                                       ttAGGGGCTGATCATAGCGCAGGGGGCATGGGCTGTTTGGTGATTATGTGCTGTGTGTACGTTTGGCAACAGTGACCTGCAGCCGCCTTGTGCTGCGCAAGGCAGGGGGTCAACTACCCGCGGGGGCATCATTGACCACCTTGAACCgca                                                                                             <  1:2308547/150‑1 (MQ=255)
                                                       ttAGGGGCTGATCATAGCGCAGGGGGCATGGGCTGTTTGGTGATTATGTGCTGTGTGTACGCTTGGCAACAGTGACCTGCAGCCGCCTTGTGCTGCGCAAGGCAGGGGGTCAACTACCCGCGGGGGCATCATTGACCACCTTGAACCgca                                                                                             >  1:2381543/1‑150 (MQ=255)
                                                              cTGATCATAGCGCAGGGGGCATGGCCTGTTTGGTGATTATGTGCTGTGTGTACGCTTGGCAACAGTGACCTGCAGCCGCCTTGTGCTGCGCAAGGCAGGGGGTCAACTACCCGCGGGGGCATCATTGACCACCTTGAACCGCAGCACGcc                                                                                      >  2:57681/1‑150 (MQ=255)
                                                               tGATCATAGCGCAGGGGGCATGGGCTGTTTGGTGATTATGTGCTGTGTGTACGCTTGGCAACAGTGACCTGCAGCCGCCTTGTGCTGCGCAAGGCAGGGGGTCAACTACCCGCGGGGGCATCATTGACCACCTTGAACCGCAGCACGCCg                                                                                     <  2:2254689/150‑1 (MQ=255)
                                                                 aTCATAGCGCAGGGGGCATGGGCTGTTTGGTGATTATGTGCTGTGTGTACGCTTGGCAACAGTGACCTGCAGCCGCCTTGTGCTGCGCAAGGCAGGGGGTCAACTACCCGCGGGGGCATCATTGACCACCTTGAACCGCAGCACGCCGAt                                                                                   <  1:227519/150‑1 (MQ=255)
                                                                 aTCATAGCGCAGGGGGCATGGGCTGTTTGGTGATTATGTACTGTGTGTACGCTTGGCAACAGTGACCTGCAGCCGCCTTGTGCTGCGCAAGGCAGGGGGTCAACTACCCGCGGGGGCATCATTGACCACCTTGAACCGCAGCACGCCGAt                                                                                   <  1:563101/150‑1 (MQ=255)
                                                                  tCATAGCGCAGGGGGCATGGGCTGTTTGGTGATTATGTGCTGTGTGTACGCTTGGCAACAGTGACCTGCAGCCGCCTTGTGCTGCGCAAGGCAGGGGGTCAACTACCCGCgggg                                                                                                                      >  2:1758071/1‑114 (MQ=255)
                                                                  tCATAGCGCAGGGGGCATGGGCTGTTTGGTGATTATGTGCTGTGTGTACGCTTGGCAACAGTGACCTGCAGCCGCCTTGTGCTGCGCAAGGCAGGGGGTCAACTACCCGCgggg                                                                                                                      <  1:1758071/114‑1 (MQ=255)
                                                                       gcgcAGGGGGCATGGGCTGATTGGTGATTATGTGCTGTGTGTACGCTTGGCAACAGTGACCTGCAGCCGCCTTGTGCTGCGCAAGGCAGCGGGGCACACATCCGCGGGGGCATCATTGACCCCCTTGAACCGCAGCACGCCGATCACTTg                                                                             >  2:1271265/1‑150 (MQ=255)
                                                                        cgcAGGGGGCATGGGCTGTTTGGTGATTATGTGCTGTGTGTACGCTTGGCAACAGTGACCTGCAGCCGCCTTGTGCTGCGCAAGGCAGGGGGTCAACTACCCGCGGGGGCATCATTGACCACCTTGAACCGCAGCACGCCGATCACTTGc                                                                            >  2:1546388/1‑150 (MQ=255)
                                                                        cgcAGGGGGCATGGGCTGTTTGGTGATTATGTGCTGTGAGGACGCTTGGCAACAGTGACCTGCAGCCGCCTTGTGCTGCGTAAGGCAGGGGGTCAACTACCCGCGGGGGCATCATTGACCACCTTGAACCGCAGCACGCCGATCACTTGc                                                                            <  1:738606/150‑1 (MQ=255)
                                                                               ggCATGGGCTGTTTGGTGATTATGTGCTGTGTGTACGCTTGGCAACAGTGACCTGCAGCCGCCTTGTGCTGCGCAAGGCAGGGGGTCAACTACCCGCGGGGGCATCATTGACCACCTTGAACCGCAGCACGCCGATCACTTGCCCATCCt                                                                     >  2:875842/1‑150 (MQ=255)
                                                                                  aTGGGCTGTTTGGTGATTATGTGCTGTGTGTACGCTTGGCAACAGTGACCTGCAGCCGCCTTGTGCTGCGCAAGGCAGGGGGTCAACTACCCGCGGGGGCATCATTGACCACCTTGAACCGCAGCACGCCGATCACTTGCCCATCCTCgg                                                                  <  1:2033181/150‑1 (MQ=255)
                                                                                   tGGGCTGTTTGGTGATTATGTGCTGTGTGTACGCTTGGCAACAGTGACCTGCAGCCGCCTTGTGCTGCGCAAGGCAGGGGGTCAACTACCCGCGGGGGCATCATTGACCACCTTGAACCGCAGCACGCCGATCACTTGCCCATCCTCGGt                                                                 <  2:1205510/150‑1 (MQ=255)
                                                                                      gCTGTTTGGTGATTATGTGCTGTGTGTACGCTTGGCAACAGTGACCTGCAGCCGCCTTGTGCTGCGCAAGGCAGGGGGTCAACTACCCGCgg                                                                                                                        >  1:476303/1‑92 (MQ=255)
                                                                                      gCTGTTTGGTGATTATGTGCTGTGTGTACGCTTGGCAACAGTGACCTGCAGCCGCCTTGTGCTGCGCAAGGCAGGGGGTCAACTACCCGCgg                                                                                                                        <  2:476303/92‑1 (MQ=255)
                                                                                       cTGTTTGGTGATTATGTGCTGTGTGTACGCTTGGCAACAGTGACCTGCAGCCGCCTTGTGCTGCGCAAGGCAGGGGGTCAACTACCcgcg                                                                                                                         >  1:485212/1‑90 (MQ=255)
                                                                                       cTGTTTGGTGATTATGTGCTGTGTGTACGCTTGGCAACAGTGACCTGCAGCCGCCTTGTGCTGCGCAAGGCAGGGGGTCAACTACCcgcg                                                                                                                         <  2:485212/90‑1 (MQ=255)
                                                                                          tttGGTGATTATGTGCTGTGTGTACGCTTGGCAACAGTGACCTGCAGCCGCCTTGTGCTGCGCAAGGCAGGGGGTCAACTACCCGCGGGGGCATCATTGACCACCTTGAACCGCAGCACGCCGATCACTTGCCCATCCTCGGTCAGCAcc                                                          >  2:2140952/1‑150 (MQ=255)
                                                                                          tttGGTGATTATGTGCTGTGTGTACGCTTGGCAACAGTGACCTGCAGCCGCCTTGTGCTGCGCAAGGCAGGGGGTCAACTACCCGCGGGGGCATCATTGACCACCTTGAACCGCAGCACGCCGATCACTTGCCCATCCTCGGTCAGCAcc                                                          >  1:1412871/1‑150 (MQ=255)
                                                                                           ttGGTGATTATGTGCTGTGTGTACGCTTGGCAACAGTGACCTGCAGCCGCCTTGTGCTGCGCAAGGCAGGGGGTCAACTACCCGCGGGGGCATCATTGACCACCTTGAACCgcag                                                                                            >  2:2181080/1‑115 (MQ=255)
                                                                                           ttGGTGATTATGTGCTGTGTGTACGCTTGGCAACAGTGACCTGCAGCCGCCTTGTGCTGCGCAAGGCAGGGGGTCAACTACCCGCGGGGGCATCATTGACCACCTTGAACCgcag                                                                                            <  1:2181080/115‑1 (MQ=255)
                                                                                              gTGATTATGTGCTGTGTGTACGCTTGGCAACAGTGACCTGCAGCCGCCTTGTGCTGCGCAAGGCAGGGGGTCAACTACCCGCGGGGGCATCATTGACCACCTTGAACCGCAGCACGCCGATCACTTGCCCATCCTCGGTCAGCACCCTCa                                                      >  1:1304778/1‑150 (MQ=255)
                                                                                               tGATTATGTGCTGTGTGTACGCTTGGCAACAGTGACCTGCAGCCGCCTTGTGCTGCGCAAGGCAGGGGGTCAACTACCCGCGGGGGCATCATTGACCACCTTGAACCGCAGCACGCCGATCACTTGCCCATCCTCGGTCAGCACCCTCAc                                                     >  2:2026511/1‑150 (MQ=255)
                                                                                                 aTTATGTGCTGTGTGTACGCTTGGCAACAGTGACCTGCAGCCGCCTTGTGCTGCGCAAGGCAGGGGGTCAACTACCCGCGGGGGCATCATTGACCACCTTGAACCGCAGCACGCCGATCACTTGCCCATCCTCGGTCAGCACCCTCACCt                                                   >  2:743755/1‑150 (MQ=255)
                                                                                                      gtgCTGTGTGTACGCTTGGCAACAGTGACCTGCAGCCGCCTTGTGCTGCGCAAGGCAGGGGGTCAACTACCCGCGGGGGCATCATTGACCACCTTGAACCGCAGCACGCCGATCACTTGCCCATCCTCGGTCAGCACCCTCACCTGCCAc                                              >  1:1288758/1‑150 (MQ=255)
                                                                                                         cTGTGTGTACGCTTGGCAACAGTGACCTGCAGCCGCCTTGTGCTGCGCAAGGCAGGGGGTCAACTACCCGCGGGGGCATCATTGACCACCTTGAACCGCAGCACGCCGATCACTTGCCCATCCTCGGTCAGCACCCTCACCTGCCACTTg                                           >  1:51003/1‑150 (MQ=255)
                                                                                                           gtgtgtACGCTTGGCAACAGTGACCTGCAGCCGCCTTGTGCTGCGCAGGGCAGGGGGTCAACTACCCGCGGGGGCATCATTGACCACCTTGAACCGCAGCACGCCGATCACTTGCCCATCCTCGGTCAGCACCCTCACCTGCCACTTGcc                                         >  2:1615215/1‑150 (MQ=255)
                                                                                                            tgtgtACGCTTGGCAACAGTGACCTGCAGCCGCCTTGTGCTGCGCAAGGCAGGGGGTCAACTACCCGCGGGGGCATCATTGACCACCTTGAACCGCAGCACGCCGATCACTTGCCCATCCTCGGTCAGCACCCTCACCTGCCACTTGCCt                                        >  1:1691639/1‑150 (MQ=255)
                                                                                                               gtACGCTTGGCAACAGTGACCTGCAGCCGCCTTGTGCTGCGCAAGGCAGGGGGTCAACTACCCGCGGGGGCATCATTGACCACCTTGAACCGCAGCACGCCGATCACTTGCCCATcc                                                                      <  1:1064362/117‑1 (MQ=255)
                                                                                                               gtACGCTTGGCAACAGTGACCTGCAGCCGCCTTGTGCTGCGCAAGGCAGGGGGTCAACTACCCGCGGGGGCATCATTGACCACCTTGAACCGCAGCACGCCGATCACTTGCCCATcc                                                                      >  2:1064362/1‑117 (MQ=255)
                                                                                                                tACGCTTGGCAACAGTGACCTGCAGCCGCCTTGTGCTTCGCAAGGCAGGGGGTCAACTACCCGCGGGGGCATCATTGACCACCTTGAACCGCAGCACGCCGATCACTTGCCCATCCTCGGTCAGCACCCTCACCTGCCACTTGCCTACCg                                    >  1:192403/1‑150 (MQ=255)
                                                                                                                tACGCTTGGCAACAGTGACCTGCAGCCGCCTTGTGCTGCGCAAGGCAGGGGGTCAACTACCCGCGGGGGCATCATTGACCACCTTGAACCGCAGCACGCCGATCACTTGCCCATCCTCGGTCAGCACCCTCACCTGCCACTTGCCTACCg                                    <  1:684979/150‑1 (MQ=255)
                                                                                                                  cGCTTGGCAACAGTGACCTGCAGCCGCCTTGTGCTGCGCAAgg                                                                                                                                             <  2:361735/43‑1 (MQ=255)
                                                                                                                  cGCTTGGCAACAGTGACCTGCAGCCGCCTTGTGCTGCGCAAgg                                                                                                                                             >  1:361735/1‑43 (MQ=255)
                                                                                                                    cTTGGCAACAGTGACCTGCAGCCGCCTTGTGCTGCGCAAGGCAGGGGGTCAACTACCCGCGGGGGCATCATTGACCACCTTGAACCGCAGCACGCCGATCACTTGCCCATCCTCGGTCAGCACCCTCACCTGCCACTTGCCTACCGGGtt                                <  1:2024413/150‑1 (MQ=255)
                                                                                                                     ttGGCAACAGTGACCTGCAGCCGCCTTGTGCTGCGCAAGGCAGGGGGTCAACTACCCGCGGGGGCATCATTGACCACCtt                                                                                                     >  2:801971/1‑80 (MQ=255)
                                                                                                                     ttGGCAACAGTGACCTGCAGCCGCCTTGTGCTGCGCAAGGCAGGGGGTCAACTACCCGCGGGGGCATCATTGACCACCtt                                                                                                     <  1:801971/80‑1 (MQ=255)
                                                                                                                       ggCAACAGTGACCTGCAGCCGCCTTGTGCTGCGCAAGGCAGGGGGTCAACTACCCGCGGGGGCATCATTGACCACCTTGACCCGCAGCACGCCGATCACTTGCCCATCCTCGGTCAGCACCCTCACCTGCCACTTGCCTACCGGGTTggg                             >  2:1669606/1‑150 (MQ=255)
                                                                                                                        gCAACAGTGACCTGCAGCCGCCTTGTGCTGCGCAAGGCAGGGGGTCAACTACCCGCGGGGGCATCATTGACCACCTTGAACCGCAGCACGCCGATCACTTGCCCATCCTCGGTCAGCACCCTCACCTGCCACTTGCCTACCGGGTTGGGc                            <  2:2057608/150‑1 (MQ=255)
                                                                                                                          aaCAGTGACCTGCAGCCGCCTTGTGATGCGCAAGGCAGGGGGTCAACTACCCGCGGGGGCATCATTGACCACCTTGAACCGCAGCACGCCGATCACTTGCCCATCCTCGGTCAGCACCCTCACCTGCCACTTGCCTACCGGGTTGGGCgg                          <  2:2111472/150‑1 (MQ=255)
                                                                                                                           aCAGTGACCTGCAGCCGCCTTGTGCTGCGCAAGGCAGGGGGTCAACTACCCGCGGGGGCATCATTGACCACCTTGAACCGCAGCACGCCGATCACTTGCCCATCCTCGGTCAGCACCCTCACCTGCCACTTGCCTACCGGGTTGGGCggg                         >  1:399421/1‑150 (MQ=255)
                                                                                                                            cAGTGACCTGCAGCCGCCTTGTGCTGCGCAAGGCAGGGGGTCAACTACCCGCGGGGGCATCATTGACCACCTTGAACCGCAGCACGCCGATCACTTGCCCATCCTCGGTCAGCACCCTCACCTGCCACTTg                                           >  1:1979776/1‑131 (MQ=255)
                                                                                                                            cAGTGACCTGCAGCCGCCTTGTGCTGCGCAAGGCAGGGGGTCAACTACCCGCGGGGGCATCATTGACCACCTTGAACCGCAGCACGCCGATCACTTGCCCATCCTCGGTCAGCACCCTCACCTGCCACTTg                                           <  2:1979776/131‑1 (MQ=255)
                                                                                                                                 aCCTGCAGCCGCCTTGTGCTGCGCAAGGCAGGGGGTCAACTACCCGCGGGGGCATCATTGACCACCTTGAACCGCAGCACGCCGATCACTTGCCCATCCTCGGTCAGCACCCTCACCTGCCACTTGCCTACCGGGTTGGGCGGGAAGTTc                   <  1:743755/150‑1 (MQ=255)
                                                                                                                                   cTGCAGCCGCCTTGTGCTGCGCAAGGCAGGGGGTGAACGACCCGCGGGGGCATCATTGACCACCTTGAACCGCAGAACGCCGAGCACTTGCCCATCCTCGGTCAGCACCCTCACCTGCCACTTGCCTACCGGGTTGGGCGGGAAGTTCTg                 >  1:804301/1‑150 (MQ=255)
                                                                                                                                      cccctgccTTGCGCAGCACAAGGCAGGGGGTCAACTACCCGCGGGGGCATCATTGACCACCTTGAACCGCAGCACGCCGATCACTTGCCCATCCTCGGTCAGCACCCTCACCTGCCACTTGCCTACCGGGTTGGGCGGGAAGtt                    >  1:2095654/6‑144 (MQ=255)
                                                                                                                                      cccctgccTTGCGCAGCACAAGGCAGGGGGTCAACTACCCGCGGGGGCATCATTGACCACCTTGAACCGCAGCACGCCGATCACTTGCCCATCCTCGGTCAGCACCCTCACCTGCCACTTGCCTACCGGGTTGGGCGGGAAGtt                    <  2:2095654/139‑1 (MQ=255)
                                                                                                                                      cccctgccTTGCGCAGCACAAGGCAGGGGGTCAACTACCCGCGGGGGCATCATTGACCACCTTGAACCGCAGCACGCCGATCACTTGCCCATCCTCGGTCAGCACCCTCACCTGCCACTTGCCTACCGGGTTGGGCGGGAAGTTCTGCtt              >  2:865944/6‑150 (MQ=255)
                                                                                                                                      cccctgccTTGCGCAGCACAAGGCAGGGGGTCAACTACCCGCGGGGGCATCATTGACCACCTTGAACCGCAGCACGCCGATCACTTGCCCATCCTCGGTCAGCACCCTCACCTGCCACTTGCCTACCGGGTTGGGCGGGAAGTTCTGCtt              >  1:1803801/6‑150 (MQ=255)
                                                                                                                                        gccgccTTGTGCTGCGCAAGGCAGGGGGTCAACTACCCGCGGGGTCATCATTGACCACCTTGAACCGCAGCACGCCGATCACTTGCCCATCCTCGGTCAGCACCCTCACCTGCCACTTGCCTACCGGGTTGGGCGGGAAGTTCTGCTtgt            <  2:1738150/150‑1 (MQ=255)
                                                                                                                                        gccgccTTGTGCTGCGCAAGGCAGGGGGTCAACTACCCGCGGGGGCATCATTGACCACCTTGAACCGCAGCACGCCGATCACTTGCCCATCCTCGGTCAGCACCCTCACCTGCCACTTGCCTACCGGGTTGGGCGGGAAGTTCTGCTtgt            <  1:57681/150‑1 (MQ=255)
                                                                                                                                        gccgccTTGTGCTGCGCAAGGCAGGGGGTCAACTACCCGCGGGGGCATCATTGACCACCTTGAACCGCAGCACGCCGATCACTTGCCCATCCTCGGTCAGCACCCTCACCTGCCACTTGCCTACCGGGTTGGGCGGGAAGTTCTGCTtgt            <  1:875842/150‑1 (MQ=255)
                                                                                                                                             cTTGTGCTGCGCAAGGCAGGGGGTCAACTACCCGCGGGGGCATCATTGACCACCTTGAACCGCAGCACGCCGATCACTTGCCCATCCTCGGTCAGCACCCTCACCTGCCACTTGCCTACCGGGTTggg                             >  2:1920542/1‑128 (MQ=255)
                                                                                                                                             cTTGTGCTGCGCAAGGCAGGGGGTCAACTACCCGCGGGGGCATCATTGACCACCTTGAACCGCAGCACGCCGATCACTTGCCCATCCTCGGTCAGCACCCTCACCTGCCACTTGCCTACCGGGTTggg                             <  1:1920542/128‑1 (MQ=255)
                                                                                                                                             cTTGTGCTGCGCAAGGCAGGGGGTCAACTACCCGCGGGGGCATCATTGACCACCTTGAACCGCAGCACGCCGATCACTTGCCCATCCTCGGTCAGCACCCTCACCTGCCACTTGCCTACCGGGTTGGGCGGGAAGTTCTGCTTGTGGGTc       >  1:4311/1‑150 (MQ=255)
                                                                                                                                              ttGTGCTGCGCAAGGCAGGGGGTCAACTACCCGCGGGGGCATCATTGACCACCTTGAACCGCAGCACGCCGATCACTTGCCCATCCTCGGTCAGCACCCTCACCTGCCACTTGCCTACCGGGTTGGGCGGGAAGTTCTGCTTGTGGGTcc      >  1:548913/1‑150 (MQ=255)
                                                                                                                                              ttGTGCTGCGCAAGGCAGGGGGTCAACTACCCGCGGGGGCATCATTGACCACCTTGAACCGCAGCACGCCGATCACTTGCCCATCCTCGGTCAGCACCCTCACCTGCCACTTGCCTACCGGGTTGGGCGGGAAGTTCTGCTTGTGGGTcc      <  1:844842/150‑1 (MQ=255)
                                                                                                                                              ttGTGCTGCGCAAGGCAGGGGGTCAACTACCCGCGGGGGCATCATTGACCACCTTGAACCGCAGCACGCCGATCACTTGCCCATCCTCGGTCAGCACCCTCACCTGCCACTTGCCTACCGGGTTGGGCGGGAAGTTCTGCTTGTGGGTcc      <  1:2140952/150‑1 (MQ=255)
                                                                                                                                                  gctgcGCAAGGCAGGGGGTCAACTACCCGCGGGGGCATCATTGACCACCTTGAACCGCAGCACGCCGATCACTTGCCCATCCTCGGTCAGCACCCTCACCTGCCACTTGCCTACCGGGTTGGGCGGGAAGTTCTGCTTGTGGGTCCAGGc  <  2:1691639/150‑1 (MQ=255)
                                                                                                                                                    tgcGCAAGGCAGGGGGTCAACTACCCGCGGGGGCATCATTGACCACCTTGAACCGCAGCACGCCGATCACTTGCCCATCCTCGGTCAGCACCCTCACCTGCCACTTGCCTACCGGGTTGGGCGGGAAGTTCTGCt               >  1:752072/1‑135 (MQ=255)
                                                                                                                                                    tgcGCAAGGCAGGGGGTCAACTACCCGCGGGGGCATCATTGACCACCTTGAACCGCAGCACGCCGATCACTTGCCCATCCTCGGTCAGCACCCTCACCTGCCACTTGCCTACCGGGTTGGGCGGGAAGTTCTGCt               <  2:752072/135‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                   
CAGGGTGGCGCTGGGGTTGGTCATAGGCTCCATGCAATTGACTCGGCGCTAAGGCTTAGGGGCTGATCATAGCGCAGGGGGCATGGGCTGTTTGGTGATTATGTGCTGTGTGTACGCTTGGCAACAGTGACCTGCAGCCGCCTTGTGCTGCGCAAGGCAGGGGGTCAACTACCCGCGGGGGCATCATTGACCACCTTGAACCGCAGCACGCCGATCACTTGCCCATCCTCGGTCAGCACCCTCACCTGCCACTTGCCTACCGGGTTGGGCGGGAAGTTCTGCTTGTGGGTCCAGGC  >  NC_002947/150917‑151212

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑