| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,266,695 | A→T | 6.2% | A433A (GCT→GCA) | quiP ← | acyl‑homoserine lactone acylase QuiP |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,266,695 | 0 | A | T | 6.2% | 357.6 / 8.9 | 114 | A433A (GCT→GCA) | quiP | acyl‑homoserine lactone acylase QuiP |
| Reads supporting (aligned to +/- strand): ref base A (58/48); new base T (3/4); total (61/53) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.01e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.44e-01 | |||||||||||
Only 100 of 116 total aligned reads displayed.
CATCGGGTCGGCATAGCCGTCCCAGTCGTAACGCCCGTCCCAGCCCGGCGAGGGCAGCAGGCCCTGGCCTTCGCGGCGATTGGGGTAGCGGCCACTGACTTGCCAGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCGCTCCACGTTCTTGGCCCGCGTCAGGTCGAACAGGGCATCCAGGCTGCGATCACCTTTGAACTGGGGCAGGTTCAGCGCCAGGCCCAGGCTGGCGTTTTCTGGCTGGGCCAGCA > NC_002947/1266551‑1266843 | caTCGGGTCGGCATAGCCGTCCCAGTCGTAACGCCCGTCCCAGCCCGGCGAGGGCAGCAGGCCCTGGCCTTCGCGGCGATTGGGGTAGCGGCCACTGACTTGCCAGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCagcagc < 1:424568/150‑1 (MQ=255) cGGGTCGGCATAGCCGTCCCAGTCGTAACGCCCGTCCCAGCCCGGCGAGGGCAGCAGGCCCTGGCCTTCGCGGCGATTGGGGTAGCGGCCACTGACTTGTCAGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGt < 1:1640449/150‑1 (MQ=255) cGGGTCGGCATAGCCGTCCCAGTCGTAACGCCCGTCCCAGCCCGGCGAGGGCAGCAGGCCCTGGCCTTCGCGGCGATTGGGGTAGCGGCCACTGACTTGCCAGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGt > 2:1503525/1‑150 (MQ=255) tCGGCATAGCCGTCCCAGTCGTAACGCCCGTCCCAGCCCGGCGAGGGCAGCAGGCCCTGGCCTTCGCGGCGATTGGGGTAGCGGCCACTGACTTGCCAGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCTGCTGCCGTC‑aac < 1:2347603/150‑3 (MQ=255) tCGGCATAGCCGTCCCAGTCGAAACGCCCAAACCAAAGCGGAAAAAAAACCAGGCCCGGGCCGTCGCGGCGATTGGGGTAGCGGCCACTGACTTGCCAGCCGCTGTGCTCAGGCTAGGCAAACACGCAGTTGACGGCTGCTGCCGTC‑aac < 2:1728427/150‑3 (MQ=255) aGCCGTCCCAGTCGTAACGCCCGTCCCAGCCCGGCGAGGGCAGCAGGCCCTGGCCTTCGCGGCGATTGGGGTAGCGGCCACTGACTTGCCAGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACgtg > 2:754691/1‑150 (MQ=255) ggcGTCCTTGTCATAACACCCATCCCACCCCGGCGAGGGCAGCAGGCCCTGGCCTTCGCGGCGATTGGGGTAGCGGCCACTGACTTGCCAGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACgtgt < 2:2319262/148‑1 (MQ=255) gCCGTCCCAGTCGTAACGCCCGTCCCAGCCCGGCGAGGGCAGCAGGCCCTGGCCTTCGCGGCGATTGGGGTAGCGGCCACTGACTTGCCAGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACgtgt > 2:558113/1‑150 (MQ=255) ccAGTCGTAACGCCCGTCCCAGCCCGGCGAGGGCAGCAGGCCCTGGCCTTCGCGGCGATTGGGGTAGCGGCCACTGACTTGCCAGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGtt < 2:2209761/150‑2 (MQ=255) ccAGTCGTAACGCCCGTCCCAGCCCGGCGAGGGCAGCAGGCCCTGGCCTTCGCGGCGATTGGGGTAGCGGCCACTGACTTGCCAGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTc < 1:1503525/150‑1 (MQ=255) ccAGTCGTAACGCCCGTCCCAGCCCGGCGAGGGCAGCAGGCCCTGGCCTTCGCGGCGATTGGGGTAGCGGCCACTGACTTGCCAGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTc > 2:418784/1‑150 (MQ=255) cGTAACGCCCGTCCCAGCCCGGCGAGGGCAGCAGGCCCTGGCCTTCGCGGCGATTGGGGTAGCGGCCACTGACTTGCCAGCCGATGTGCTCAGGCTAGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGAAgg < 1:61816/150‑1 (MQ=255) aaCGCCCGTCCCAGCCCGGCGAGGGCAGCAGGCCCTGGCCTTCGCGGCGATTGGGGTAGCGGCCACTGACTTGCCAGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTAACTGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGAAGGccc > 1:1231617/1‑150 (MQ=255) cGCCCGTCCCAGCCCGGCGAGGGCAGCAGGCCCTGGCCTTCGCGGCGATTGGGGTAGCGGCCACTGACTTGCCAGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCGc > 2:2380702/1‑150 (MQ=255) gCCCGTCCCAGCCCGGCGAGGGCAGCAGGCCCTGGCCTTCGCGGCGATTGGGGTAGCGGCCACTGACTTGCCAGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCGCt > 2:2252333/1‑150 (MQ=255) gCCCGTCCCAGCCCGGCGAGGGCAGCAGGCCCTGGCCTTCGCGGCGATTGGGGTAGCGGCCACTGACTTGCCAGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCGCt > 1:2056818/1‑150 (MQ=255) ccAGCCCGGCGAGGGCAGCAGGCCCTGGCCTTCGCGGCGATTGGGGTAGCGGCCACTGACTTGCCAGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCGCTCCACGtt > 1:1340924/1‑150 (MQ=255) ccAGCCCGGCGAGGGCAGCAGGCCCTGGCCTTCGCGGCGATTGGGGTAGCGGCCACTGACTTGCCAGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCGCTCCACGtt > 1:107390/1‑150 (MQ=255) cAGCCCGGCGAGGGCAGCAGGCCCTGGCCTTCGCGGCGATTGGGGTAGCGGCCACTGACTTGCCAGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCGCTCCACGTTc > 2:2265221/1‑150 (MQ=255) aGCCCGGCGAGGGCAGCAGGCCCTGGCCTTCGCGGCGATTGGGGTAGCGGCCACTGACTTGCCAGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTc > 2:1591708/1‑130 (MQ=255) cccGGCGAGGGCAGCAGGCCCTGGCCTTCGCGGCGATTGGGGTAGCGGCCACTGACTTGCCAGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCGCTCCACGTTCTTg > 2:1488886/1‑150 (MQ=255) cccGGCGAGGGCAGCAGGCCCTGGCCTTCGCGGCGATTGGGGTAGCGGCCACTGACTTGCCAGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCGCGCCACGTTCTTg > 1:247085/1‑150 (MQ=255) ccGGCGAGGGCAGCAGGCCCTGGCCTTCGCGGCGATTGGGGTAGCGGCCACTGACTTGCCAGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCGCTCCACGTTCTTgg < 1:460715/150‑1 (MQ=255) cGGCGAGGGCAGCAGGCCCTGGCCTTCGCGGCGATTGGGGTAGCGGCCACTGACTTGCCAGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCGCTCCACGTTCTTgg > 1:1779064/1‑149 (MQ=255) cGGCGAGGGCAGCAGGCCCTGGCCTTCGCGGCGATTGGGGTAGCGGCCACTGACTTGCCAGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCGCTCCACGTTCTTgg < 2:1779064/149‑1 (MQ=255) cGGCGAGGGCAGCAGGCCCTGGCCTTCGCGGCGATTGGGGTAGCGGCCACTGACTTGCCAGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCGCTCCACGTTCTTGGc < 1:1488886/150‑1 (MQ=255) gCGAGGGCAGCAGGCCCTGGCCTTCGCGGCGATTGGGGTAGCGGCCACTGACTTGCCAGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCGCTCCACGTTCTTGGccc < 1:2265221/150‑1 (MQ=255) gcagcaGGCCCTGGCCTTCGCGGCGATTGGGGTAGCGGCCACTGACTTGCCAGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCGCTCCACGTTCTTGGCCCGCGTcc > 1:34422/1‑149 (MQ=255) agcagGCCCTGGCCTTCGCGGCGATTGGGGTAGCGGCCACTGACTTGCCAGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCGCTCCACGTTCTTGGCCCGCGTCAgg > 1:257778/1‑150 (MQ=255) cagGCCCTGGCCTTCGCGGCGATTGGGGTAGCGGCCACTGACTTGCCAGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCGCTCCCCGTTCTTGGCCCGCGTCAGGTc < 1:1419328/150‑1 (MQ=255) agGCCCTGGCCTTCGCGGCGATTGGGGTAGCGGCCACTGACTTGCCAGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCGCTCCACGTTCTTGGCCCGCGTCAGGTCg < 1:865803/150‑1 (MQ=255) gCCCTGGCCTTCGCGGCGATTGGGGTAGCGGCCACTGACTTGCCAGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCGCTCCACGTTCTTGGCCCGCGTCAGGTCGaa > 2:440920/1‑150 (MQ=255) gCCCTGGCCTTCGCGGCGATTGGGGTAGCGGCCACTGACTTGCCAGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCGCTCCACGTTCTTGGCCCGCGTCAGGTCGaa > 2:1634709/1‑150 (MQ=255) cccTGGCCTTCGCGGCGATTGGGGTAGCGGCCACTGACTTGCCAGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCGCTCCACGTTCTTGGCCCGCGTCAGGTCGAAc > 2:2392321/1‑150 (MQ=255) ccTGGCCTTCGCGGCGATTGGGGTAGCGGCCACTGACTTGCCAGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACgt > 2:1672963/1‑101 (MQ=255) ccTGGCCTTCGCGGCGATTGGGGTAGCGGCCACTGACTTGCCAGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCGCTCCACGTTCTTGGCCCGCGTCAGGTCGAACa < 1:558113/150‑1 (MQ=255) ccTGGCCTTCGCGGCGATTGGGGTAGCGGCCACTGACTTGCCAGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCGCTCCACGTTCTTGGCCCGCGTCAGGTCGAACa < 2:2056818/150‑1 (MQ=255) ccTGGCCTTCGCGGCGATTGGGGTAGCGGCCACTGACTTGCCAGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTATCGAAGGCCCGCTCCACGTTCTTGGCCCGCGTCAGGTCGAACa > 1:517702/1‑150 (MQ=255) ccTGGCCTTCGCGGCGATTGGCGTAGCGGCCACTGACTTGCTAGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACgt < 1:1672963/101‑1 (MQ=255) tGGCCTTCGCGGCGATTGGGGTAGCGGCCACTGACTTGCCAGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCGCTCCCCGTTATTGGCCCGCGTCAGGTCGacacgg > 1:1698696/1‑145 (MQ=255) cTTCGCGGCGATTGGGGTTGCGGCCACTGACTTGCCAGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCTTC‑ACTTCACGTGTGCTGTCGATGGCGCGCTCCACGTGCTTGGCCCGCGTCAGGTCGAACAGGGCAt < 1:754691/150‑1 (MQ=255) cTTCGCGGCGATTGGGGTAGCGGCCACTGACTTGCCAGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCGCTCCACGTTCTTGGCCCGCGTCAGGTCGAACAGGGCAt > 1:1809323/1‑150 (MQ=255) ttCGCGGCGATTGGGGTAGCGGCCACTGACTTGCCAGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTc > 2:312940/1‑85 (MQ=255) ttCGCGGCGATTGGGGTAGCGGCCACTGACTTGCCAGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTc < 1:312940/85‑1 (MQ=255) ggcgATTGGGGTAGCGGCCACTGACTTGCCAGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCGCTCCACGTTCTTGGCCCGCGTCAGGTCGAACAGGGCATCCAGGc < 2:334653/150‑1 (MQ=255) gATTGGGGTAGCGGCCACTGACTTGCCAGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCGCTCCACGTTCTTg < 2:2289901/116‑1 (MQ=255) gATTGGGGTAGCGGCCACTGACTTGCCAGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCGCTCCACGTTCTTg > 1:2289901/1‑116 (MQ=255) ttGGGGTAGCGGCCACTGACTTGCCAGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCGCTCCACGTTCTTGGCCCGCGTCAGGTCGAACAGGGCATCCAGGCTGCGa > 1:1719777/1‑150 (MQ=255) aGCGGCCACTGACTTGCCAGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCGCTCCACGTTCTTGGCCCGCGTCAGGTCGAACAGGGCATCCAGGCTGCGATCACCtt < 2:1809323/150‑1 (MQ=255) ggCCACTGACTTGCCAGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑aa > 1:1415559/1‑66 (MQ=255) ggCCACTGACTTGCCAGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCGCTCCACGTTCTTGGCCCGCGTCAGGTCGAACAGGGCATCCAGGCTGCGATCACCTTTGa > 1:2156092/1‑150 (MQ=255) gCCACTGACTTGCCAGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCGCTCCACGTTCTTGGCCCGCGTCAGGTCGAACAGGGCATCCAGGCTGCGATCACCTTTGaa > 2:1921365/1‑150 (MQ=255) gCCACTGACTTGCCAGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑AATTCACGTGTGCAGTCAAAGGCCCGCTCCACGTTCTTTTCCCTCGTCAGGTCGAACAGGGCATCCAGGCTGCGATCACCTTTGaa > 2:273400/1‑150 (MQ=255) aCTGACTTGCCAGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCGCTCCACGTTCTTGGCCCGCGTCAGGTCGAACAGGGCATCCAGGCTGCGATCACCTTTGAACTg > 1:1237412/1‑150 (MQ=255) cTGACTTGCCAGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCGCTCCACGTTCTTGGCCCGCGTCAGGTCGAACAGGGCATCCa > 1:2397368/1‑127 (MQ=255) cTGACTTGCCAGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCGCTCCACGTTCTTGGCCCGCGTCAGGTCGAACAGGGCATCCa < 2:2397368/127‑1 (MQ=255) cTGACTTGCCAGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCGCTCCACGTTCTTGGCCCGCGTCAGGTCGAACAGGGCATCCAGGCTGCGATCACCTTTGAACTgg < 1:785082/150‑1 (MQ=255) tGACTTGCCAGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCGCTCCACGTTCTTGGCCCGCGTCAGGTCGAACAGGGCATCCAGGCTGCGATCACCTTTGAACTggg < 1:2179109/150‑1 (MQ=255) tGACTTGCCAGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCGCTCCACGTTCTTGGCCCGCGTCAGGTCGAACAGGGCATCCAGGCTGCGATCACCTTTGAACTggg > 2:173403/1‑150 (MQ=255) cTTGCCAGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCGCTCCACGTTCTTGGCCCGCGTCAGGTCGAACAGGGCATCCAGGCTGCGATCACCTTTGAACTGGGGCa < 1:1874245/150‑1 (MQ=255) ttGCCAGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCGCTCCACGTTCTTGGCCCGCGTCAGGTCGAACAg > 2:185262/1‑114 (MQ=255) ttGCCAGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCGCTCCACGTTCTTGGCCCGCGTCAGGTCGAACAGGGCATCCAGGCTGCGATCACCTTTGAACTGGGGCAg < 1:2368028/150‑1 (MQ=255) ttGCCAGAGGATGTGCTCACGACGGGCAAAAACGAAGATAGCGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCACGCTACACGTTCGTCGCCCGAGCGCGGTGGAACAGGGCATCCAGGCTGCGATCGCCTTTGAACTGGGGCAg < 2:340290/150‑1 (MQ=255) gCCAGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCCGGAGTGCTGTCGAAGGCCCGCTCCACGTTCTTGGCCCGCGTCAGGTCGAACAGGGCATCCAGGCTGCGATCGCCTTTGAACGGGGGCAGGt > 2:1025712/1‑150 (MQ=255) gCCAGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCGCTCCACGTTCTTGGCCCGCGTCAGGTCGAACa > 2:744643/1‑111 (MQ=255) gCCAGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCGCTCCACGTTCTTGGCCCGCGTCAGGTCGAACa < 1:744643/111‑1 (MQ=255) ccAGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCGCTCCACGTTCTTGGCCCGCGTCAGGTCGAACAGGGCATCCAGGCTGCGATCACCTTTGAACTGGGGCAGGtt < 1:173403/150‑1 (MQ=255) ccAGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCACTCCACGTTCTTGGCCCGCGTCAGGTCGAACAGGGCATCCAGGCTGCGATCACCTTTGAACTGGGGCAGGtt > 2:1558691/1‑150 (MQ=255) cAGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCGCTCCACGTTCTTGGCCCGCGTCAGGTCGAACAGGGCATCCAGGCTGCGATCACCTTTGAACTGGGGCAGGTTc > 2:957762/1‑150 (MQ=255) gCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCGCTCCACGTTCTTGGCCCGCGTCAGGTCGAACAGGGCATCCAGGCTGCGATCACCTTTGAACTgg > 1:11943/1‑139 (MQ=255) gCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCGCTCCACGTTCTTGGCCCGCGTCAGGTCGAACAGGGCATCCAGGCTGCGATCACCTTTGAACTgg < 2:11943/139‑1 (MQ=255) ccGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCGCTCCACGTTc < 1:181955/84‑1 (MQ=255) ccGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCGCTCCACGTTc > 2:181955/1‑84 (MQ=255) gATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCGCTCCACGTTCTTGGCCCGCGTCAGGTCGAACAGGGCATCCAGGCTGCGATCACCTTTGAACTGGGGCAGGTTCAgcgc < 2:1237412/150‑1 (MQ=255) gATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCGCTCCACGTTCTTGGCCCGCGTCAGGTCGAACAGGGCATCCAGGCTGCGATCACCTTTGAACTGGGGCAGGTTCAgcgc < 1:177979/150‑1 (MQ=255) gATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCGCTCCACGTTCTTGGCCCGCGTCAGGTCGAACAGGGCATCCAGGCTGCGATCACCTTTGAACTGGGGCAGGTTCAgcgc > 2:177979/1‑150 (MQ=255) gATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCACTCCACGTTCTTGGCCCGCGTCAGGTCGAACAGGGCATCCAGGCTGCGATCACCTTTGAACTGGGGCAGGTTCAgcgc < 1:1558691/150‑1 (MQ=255) tgtgCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCGCTCCACGTTCTTGGCCCGCGTCAGGTCGAACAGGGCATCCAGGCTGCGATCACCTTTGAACTGGGGCAGGTTCAGCGcca < 2:101212/150‑1 (MQ=255) tgCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCGCTCCACGTTCTTGGCCCGCGTCAGGTCGAACAGGGCATCCAGGCTGc < 2:2398009/115‑1 (MQ=255) cTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCGCTCCACGTTCTTGGCCCGCGTCAGGTc > 1:1813757/1‑93 (MQ=255) cTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCGCTCCACGTTCTTGGCCCGCGTCAGGTCGAACAGGGCATCCAGGCTGCGATCACCTTTGAACTGGGGCAGGTTCAGCGccaggcc > 1:2184590/1‑150 (MQ=255) gCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCGCTCCACGTTCTTGGCCCGCGTCAGGTCGAACAGGGCATCCAGGCTGCGATCACCTTTGAACTGGGGCAGGTTCAGCGccaggcccaggc > 2:1649407/1‑150 (MQ=255) tCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCGCTCCACGTTCTTGGCCCGCGTCAGGTCGAACAGGGCATCCAGGCTGCGATCACCTTTGAACTGGGGCAGGTTCAGCGCCAGGCCCAGGCTg > 1:467325/1‑150 (MQ=255) cGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCGCTCCACGTTCTTGGCCCGCGTCAGGTCGAACAGGGCATCCAGGCTGCGATCACCTTTGAACTGGGGCAGGTTCAGCGCCAGGCCCAGGCTgg > 2:1217453/1‑150 (MQ=255) aaaaaCGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCGCTCCACGTTCTTGGCCCGCGTCAGGTCGAACAGGGCATCCAGGCTGCGATCACCTTTGAACTGGGGCAGGTTCAGCGCCAGGCCCAGGCTGGCGtt > 1:1930031/1‑150 (MQ=255) aaaaaCGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCGCTCCACGTTCTTGGCCCGCGTCAGGTCGAACAGGGCATCCAGGCTGCGATCACCTGTGAACTGGAGCAGGTTCAGCGCCAGGCCCAGGCTGGCGtt < 1:1025712/150‑1 (MQ=255) aCGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCGCTCCACGTTCTTGGCCCGCGTCAGGTCGAACa < 1:424647/82‑1 (MQ=255) aCGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCGCTCCACGTTCTTGGCCCGCGTCAGGTCGAACAGGGCATCCAGGCTGCGATCACCTTTGAACTGGGGCAGGTTCAGCGCCAGGCCCAGGCTGGCGTTTTct > 2:1186549/1‑150 (MQ=255) cGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCGCTCCACGTTCTTGGCCCGCGTCAGGTCGAACAGGGCATCCAGGCTGCGATCACCTTTGAACTGGGGCAGGTTCAGCGCCAGGCCCAGGCTGGCGTTTTctg < 2:257778/150‑1 (MQ=255) gAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCGCTCCACGTTCTTGGCCCGCGTCAGGTCGAACAGGGCATCCAGGCTGCGATCACCTTTGAACTGGGGCAGTTTCAGCGCCAGGCCCAGGCTGGCGTTTTctgg > 2:799701/1‑150 (MQ=255) aagtGACGGCTGCTGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCGCTCCACGTTCTTGGCCCGCGTCAGGTCGAACAGGGCATCCAGGCTGCGATCACCTTTGAACTggg < 2:111181/108‑1 (MQ=255) aagtGACGGCTGCTGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCGCTCCACGTTCTTGGCCCGCGTCAGGTCGAACAGGGCATCCAGGCTGCGATCACCTTTGAACTggg > 1:111181/4‑111 (MQ=255) gTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCGCTCCACGTTCTTGGCCCGCGTCAGGTCGAACAGGGCATCCAGGCTGCGATCACCTTTGAACTGGGGCAGGTTCAGCGCCAGGCCCAGGCTGGCGTTTTctggctg < 1:1921365/150‑1 (MQ=255) gTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCGCTCCACGTTCTTGGCCCGCGTCAGGTCGAACAGGGCATCCAGGCTCCGATCACCTTTGAACTGGGGCAGGTTCAGCGCCAGGCCCAGGCTGGCGTTTTctggctg > 2:1056749/1‑150 (MQ=255) ttGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCGCTCCACGTTCTTGGCCCGCGTCAGGTCGAACAGGGCATCCAGGCTGCGATCACCTTTGAACTGGGGCAGGTTCAGCGCCAGGCCCAGGCTGGCGTTTTctggctgg < 1:1649407/150‑1 (MQ=255) ttGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCGCTCCACGTTCTTGGCCCGCGTCAGGTCGAACAGGGCATCCAGGCTGCGATCACCTTTGAACTGGGGCAGGTTCAGCGCCAGGCCCAGGCTGGCGTTTTctggctgg < 1:138438/150‑1 (MQ=255) ttGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCGCTCCACGTTCTTGGCCCGCGTCAGGTCGAACAGGGCATCCAGGCTGCGATCACCTTTGAACTGGGGCAGGTTCAGCGCCAGGCCCAGGCTGGCGTTTTctggctgg > 1:524551/1‑150 (MQ=255) gtGACGGCTGCTGCCGTCAACTTCACGTGTGCTGTCGAAGGCCCGCTCCACGTTCTTg < 1:1651414/57‑1 (MQ=25) gtGACGGCTGCTGCCGTCAACTTCACGTGTGCTGTCGAAGGCCCGCTCCACGTTCTTGGCCCGCGTCAGGTCGAACAGGGCATCCAGGCTGCGATCACCTTTGAACTGGGGCAGGTTCAGCGCCAGGCCCAGGCTGGCGTTTTctggctg > 2:1212729/2‑150 (MQ=255) cagcagCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCGCTCCACGTTCTTGGCCCGCGTCAGGTCGAACAGGGCATCCAGGCTGCGATCACCTTTGAACTGGGGCAGGTTCAGCGCCAGGCCCAGGCTGGCGTTTTCTGGCTGGGCcagca < 1:2392321/150‑1 (MQ=255) | CATCGGGTCGGCATAGCCGTCCCAGTCGTAACGCCCGTCCCAGCCCGGCGAGGGCAGCAGGCCCTGGCCTTCGCGGCGATTGGGGTAGCGGCCACTGACTTGCCAGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCGCTCCACGTTCTTGGCCCGCGTCAGGTCGAACAGGGCATCCAGGCTGCGATCACCTTTGAACTGGGGCAGGTTCAGCGCCAGGCCCAGGCTGGCGTTTTCTGGCTGGGCCAGCA > NC_002947/1266551‑1266843 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |