| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,286,865 | A→T | 5.5% | K81M (AAG→ATG) ‡ | PP_1125 → | putative Helicase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,286,865 | 0 | A | T | 5.5% | 328.6 / 6.2 | 103 | K81M (AAG→ATG) ‡ | PP_1125 | putative Helicase |
| Reads supporting (aligned to +/- strand): ref base A (52/45); new base T (2/4); total (54/49) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.20e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 106 total aligned reads displayed.
GATCGCCGAAGTGGCCAAGGTGCTTGGCGACATTGCCTGCGACGATGAAGGCCGCCGCGCTGGCGAGCCTGCCGTGGTGGCCGTGGAAGCGGGCACCGGTACCGGCAAGACGGTAGCCTACAGCCTGGCTGCCATCCCGGCGGCCAAGGCC‑GCCGGCAAACGCCTGGTGATCGCCACGGCCACCGTGGCCCTGCAGGAACAGATCGTCTTCAAGGACCTGCCCGACCTGATGCGCAGCAGCGGCCTCAACTTCAGCTTCGCCCTGGCCAAGGGCCGTGGCCGCTATCTGTGCCTGT > NC_002947/1286719‑1287014 | gatCGCCGAAGTGGCCAAGGTGCTTGGCGACATTGCCTGCGACGATGAAGGCCGCCGCGCTGGCGAGCCTGCCGTGGTGGCCGTGGAAGCGGGCACCGGTACCGGCAAGACGGTAGCCTACAGCCTGGCTGCCATCCCGGCGGCCAAGgc < 1:1773897/150‑1 (MQ=255) atCGCCGAAGTGGCCAAGGTGCTTGGCGACATTGCCTGCGACGATGAAGGCCGCCGCGCTGGCGAGCCTGCCGTGGTGGCCGTGGAAGCGGGCACCGGTACCGGCAAGACGGTAGCCTACAGCCTGGCTGCCATCCCGGCGGCCAAGgcc < 2:1517400/150‑1 (MQ=255) ccGAAGTGGCCAAGGTGCTTGGCGACATTGCCTGCGACGATGAAGGCCGCCGCGCTGGCGAGCCTGCCGTGGTGGCCGTGGAAGCGGGCACCGGTACCGGCAAGACGGTAGCCTACAGCCTGGCTGCCATCCCGGCGGCCAAGGcc‑gccg < 2:1378674/150‑1 (MQ=255) aaGTGGCCAAGGTGCTTGGCGACATTGCCTGCGACGATGAAGGCCGCCGCGCTGGCGAGTCTGCCGTGGTGGCCGTGGAAGCGGGCACCGGTACCGGCAAGACGGTAGCCTACAGCCTGGCTGCCATCCCGGCGGCCTTGGCC‑GCCggga < 2:542633/150‑3 (MQ=255) aaGTGGCCAAGGTGCTTGGCGACATTGCCTGCGACGATGAAGGCCGCCGCGCTGGCGAGCCTGCCGTGGTGGCCGTGGAAGCGGGCACCGGTACCGGCAAGACGGTAGCCTACAGCCTGGCTGCCATCCCGGCGGCCTTGGCc‑ggcggga < 2:811336/150‑3 (MQ=255) aaGTGGCCAAGGTGCTTGGCGACATTGCCTGCGACGATGAAGGCCGCCGCGCTGGCGAGCCTGCCGTGGTGGCCGTGGAAGCGGGCACCGGTACCGGCAAGACGGTAGCCTACAGCCTGGCTGCCATCCCGGCGGCCTTGGCC‑GCCggga < 2:2144762/150‑3 (MQ=255) aGTGGCCAAGGTGCTTGGCGACATTGCCTGCGACGATGAAGGCCGCCGCGCTGGCGAGCCTGCCGTGGTGGCCGTGGAAGCGGGCACCGGTACCGGCAAGACGGTAGCCTACAGCCTGGCTGCCATCCCGGCGGCCAAg < 1:1727593/139‑1 (MQ=255) aGTGGCCAAGGTGCTTGGCGACATTGCCTGCGACGATGAAGGCCGCCGCGCTGGCGAGCCTGCCGTGGTGGCCGTGGAAGCGGGCACCGGTACCGGCAAGACGGTAGCCTACAGCCTGGCTGCCATCCCGGCGGCCAAg > 2:1727593/1‑139 (MQ=255) gTGGCCAAGGTGCTTGGCGACATTGCCTGCGACGATGAAGGCCGCCGCGCTGGCGAGCCTGCCGTGGTGGCCGTGGAAGCGGGCACCGGTACCGGCAAGACGGTAGCCTACAGCCTGGCTGCCATCCCGGCGGCCTTGGCC‑GCCgggatg < 2:300943/150‑5 (MQ=255) ccAAGGTGCTTGGCGACATTGCCTGCGACGATGAAGGCCGCCGCGCTGGCGAGCCTGCCGTGGTGGCCGTGGAAGCGGGCACCGGTACCGGCAAGACGGTAGCCTACAGCCTGGCTGCCATCCCGGCGGCCAAGGCC‑GCCGGCAAACGcc > 2:1650226/1‑150 (MQ=255) cAAGGTGCTTGGCGACATTGCCTGCGACGATGAAGGCCGCCGCGCTGGCGAGCCTGCCGTGGTGGCCGTGGAAGCGGGCACCGGTACCGGCAAGACGGTAGCCTACAGCCTGGCTGCCATCCCGGCGGCCAAGGCC‑GCCGGCAAACGCCt < 1:822541/150‑1 (MQ=255) cAAGGTGCTTGGCGACATTGCCTGCGACGATGAAGGCCGCCGCGCTGGCGAGCCTGCCGTGGTGGCCGTGGAAGCGGGCACCGGTACCGGCAAGACGGTAGCCTACAGCCTGGCTGCCATCCCGGCGGCCAAGGCC‑GCCGGCAAACGCCt < 2:1492313/150‑1 (MQ=255) cAAGGTGCTTGGCGACATTGCCTGCGACGATGAAGGCCGCCGCGCTGGCGAGCCTGCCGTGGTGGCCGTGGAAGCGGGCACCGGTACCGGCAAGACGGTAGCCTACAGCCTGGCTGCCATCCCGGCGGCCAAGGCC‑GCCGGCAAACGCCt > 2:2379641/1‑150 (MQ=255) cAAGGTGCTTGGCGACATTGCCTGCGACGATGAAGGCCGCCGCGCTGGCGAGCCTGCCGTGGAGGCCGTGGAAGCGGCCACCGGTACCGGCACGCCGGTAGCCTACAGCCTGGCTGCCATCGCGGCGGCCAAGACC‑GCCGGCAAACGCCt > 2:1508955/1‑150 (MQ=255) cAAGGTGCTTGGCGAAATTGCCTGCGACGATGAAGGCCGCCGCGCTGGCGAGCCTGCCGTGGTGGCCGTGGAAGCGGGCACCAGTACCGGCAAGACGGTAGCCTACAGCCTGGCTGCCATCCCGGCGGGCAAGGCC‑GCCGGCaaagcccc > 2:1113848/1‑145 (MQ=255) aaGGTGCTTGGCGACATTGCCTGCGACGATGAAGGCCGCCGCGCTGGCGAGCCTGCCGTGGTGGCCGTGGAAGCGGGCACCGGTACCGGCAAGACGGTAGCCTACAGCCTGGCTGCCATCCCGGCGGCCAAgg > 1:1236470/1‑133 (MQ=255) aaGGTGCTTGGCGACATTGCCTGCGACGATGAAGGCCGCCGCGCTGGCGAGCCTGCCGTGGTGGCCGTGGAAGCGGGCACCGGTACCGGCAAGACGGTAGCCTACAGCCTGGCTGCCATCCCGGCGGCCAAgg < 2:1236470/133‑1 (MQ=255) ggTGCTTGGCGACATTGCCTGCGACGATGAAGGCCGCCGCGCTGGCGAGCCTGCCGTGGTGGCCGTGGAAGCGGGCACCGGTACCGGCAAGACGGTAGCCTACAGCCTGGCTGCCATCCCGGCGGCCAAGGCC‑GCCGGCAAACGCCTGGt < 2:333064/150‑1 (MQ=255) cTTGGCGACATTGCCTGCGACGATGAAGGCCGCCGCGCTGGCGAGCCTGCCGTGGTGGCCGTGGAAGCGGGCACCGGTACCGGCAAGACGGTAGCCTACAGCCTGGCTGCCATCCCGGCGGCCAAGGCC‑GCCGGCAAACGCCTGGTGATc < 2:2159069/150‑1 (MQ=255) gACATTGCCTGCGACGATGAAGGCCGCCGCGCTGGCGAGCCTGCCGTGGTGGCCGTGGAAGCGGGCACCGGTACCGGCAAGACGGTAGCCTACAGCCTGGCTGCCATCCCGGCGGCCAAGGCC‑GCCGGCAAACGCCTGGTGATCGCCACg > 1:1450134/1‑150 (MQ=255) gACATTGCCTGCGACGATGAAGGCCGCCGCGCTGGCGAGCCTGCCGTGGTGGCCGTGGAAGCGGGCACCGGTACCGGCAAGACGGTAGCCTACAGCCTGGCTGCCATCCCGGCGGCCAAGGCC‑GCCGGCAAACGCCTGGTGATCGCCACg > 1:1582624/1‑150 (MQ=255) gACATTGCCTGCGACGATGAAGGCCGCCGCGCTGGCGAGCCTGCCGTGGTGGCCGTGGAAGCGGGCACCGGTACCGGCAAGACGGTAGCCTACAGCCTGGCTGCCATCCAGGCGGCCAAGGCC‑GCCGGCAAACGCCTTGGGATCGcccac > 1:890947/1‑147 (MQ=255) aCATTGCCTGCGACGATGAAGGCCGCCGCGCTGGCGAGCCTGCCGTGGTGGCCGTGGAAGCGGGCACCGGTACCGGCAAGACGGTAGCCTACAGCCTGGCTGCCATCCCGGCGGCCAAGGCC‑GCCGGCAAACGCCTGGTGATCGCCACgg < 2:1426446/150‑1 (MQ=255) cTGCGACGATGAAGGCCGCCGCGCTGGCGAGCCTGCCGTGGTGGCCGTGGAAGCGGGCACCGGTACCGGCAAGACGGTAGCCTACAGCCTGGCTGCCATCCCGGCGGCCAAGGCC‑GCCGGCAAACGCCTGGTGATCGCCACggtggccgt < 1:153469/150‑8 (MQ=255) cTGCGACGATGAAGGCCGCCGCGCTGGCGAGCCTGCCGTGGTGGCCGTGGAAGCGGGCACCGGTACCGGCAAGACGGTAGCCTACAGCCTGGCTGCCATCCCGGCGGCCAAGGCC‑GCCGGCAAACGCCTGGTGATCGCCACGGCCACCGt < 1:1650226/150‑1 (MQ=255) cgaTGAAGGCCGCCGCGCTGGCGAGCCTGCCGTGGTGGCCGTGGAAGCGGGCACCGGTACCGGCAAGACGGTACGCTACAGCCTGGCTGCCATCCCGGCGGCCAAGGCC‑GCCGGCAAACGCCTGGTGATCGCCACGGCCACCGTGGCCCt < 1:772093/150‑1 (MQ=255) gaTGAAGGCCGCCGCGCTGGCGAGCCTGCCGTGGTGGCCGTGGAAGCGGGCACCGGTACCGGCAAGACGGTAGCCTACAGCCTGGCTGCCATCCCGGCGGCCAAGGCC‑GCCGGCAAACGCCTGGTGATCGCCACGGCCACCGTGGCCCTg > 1:1793448/1‑150 (MQ=255) aTGAAGGCCGCCGCGCTGGCGAGCCTGCCGTGGTGGCCGTGGAAGCGGGCACCGGTACCTGCAAGACGGTAGCCTACAGCCTGGCTGCCATCCCGGCGGCCAAg > 2:829694/1‑104 (MQ=255) aTGAAGGCCGCCGCGCTGGCGAGCCTGCCGTGGTGGCCGTGGAAGCGGGCACCGGTACCTGCAAGACGGTAGCCTACAGCCTGGCTGCCATCCCGGCGGCCAAg < 1:829694/104‑1 (MQ=255) aTGAAGGCCGCCGCGCTGGCGAGCCTGCCGTGGTGGCCGTGGAAGCGGGCACCGGTACCGGCAAGACGGTAGCCTACAGCCTGGCTGCCATCCCGGCGGCCAAGGCC‑GCCGGCAAACGCCTGGTGATCGCCACGGCCACCGTGGCCCTGc > 1:786250/1‑150 (MQ=255) aTGAAGGCCGCCGCGCTGGCGAGCCTGCCGTGGTGGCCGTGGAAGCGGGCACCGGTACCGGCAAGACGGTAGCCTACAGCCTGGCTGCCATCCCGGCGGCCAAGGCC‑GCCGGCAAACGCCTGGTGATCGCCACGGCCACCGTGGCCCTGc < 1:2165134/150‑1 (MQ=255) ggCCGCCGCGCTGGCGAGCCTGCCGTGGTGGCCGTGGAAGCGGGCACCGGTACCGGCAAGACGGTAGCCTACAGCCTGGCTGCCATCCCGGCGGCCAAGGCC‑GCCGGCAAACGCCTGGTGATCGCCACGGCCACCGTGGCCCTGCAGGaa > 2:2090800/1‑150 (MQ=255) gccgccGCGCTGGCGAGCCTGCCGTGGTGGCCGTGGAAGCGGGCACCGGTACCGGCAAGACGGTAGCCTACAGCCTGGCTGCCATCCCGGCGGCCAAGGCC‑GCCGGCAAACGCCTGGTGATCGCCACGGCCACCGTGGCCCTGCAGGAAc > 1:2012560/1‑150 (MQ=255) ccgcGCTGGCGAGCCTGCCGTGGTGGCCGTGGAAGCGGGCACCGGTACCGGCAAGACGGTAGCCTACAGCCTGGCTGCCATCCCGGCGGCCAAGGCC‑GCCGGCAAACGCCTGGTGATCGCCACGGCCACCGTGGCCCTGCAGGAACAGAt > 2:312867/1‑150 (MQ=255) ccgcGCTGGCGAGCCTGCCGTGGTGGCCGTGGAAGCGGGCACCGGTACCGGCAAGACGGTAGCCTACAGCCTGGCTGCCATCCCGGCGGCCAAGGCC‑GCCGGCAAACGCCTGGTGATCGCCACGGCCACCGTGGCCCTGCAGGAACAGAt > 1:1042458/1‑150 (MQ=255) gcgcTGGCGAGCCTGCCGTGGTGGCCGTGGAAGCGGGCACCGGTACCGGCAAGACGGTAGCCTACAGCCTGGCTGCCATCCCGGCGGCCAAGGCC‑GCCGGCAAACGCCTGGTGATCGCCACGGCCACCGTGGCCCTGCAGGAACAGATCg > 2:1377259/1‑150 (MQ=255) gcTGGCGAGCCTGCCGTGGTGGCCGTGGAAGCGGGCACCGGTACCGGCAAGACGGTAGCCTACAGCCTGGCTGCCATCCCGGCGGCCAAGGCC‑GCCGGCAAACGCCTGGTGATCGCCACGGCCACCGTGGCCCTGCAGGAACAGATCGTc < 1:279370/150‑1 (MQ=255) gcTGGCGAGCCTGCCGTGGTGGCCGTGGAAGCGGGCACCGGTACCGGCAAGACGGTAGCCTACAGCCTGGCTGCCATCCCGGCGGCCAAGGCC‑GCCGGCAAACGCCTGGTGATCGCCACGGCCACCGTGGCCCTGCAGGAACAGATCGTc > 1:647036/1‑150 (MQ=255) cGAGCCTGCCGTGGTGGCCGTGGAAGCGGGCACCGGTACCGGCAAGACGGTAGCCTACAGCCTGGCTGCCATCCCGGCGGCCAAGGCC‑GCCGGCAAACGCCTGGTGATCGCCACGGCCACCGTGGCCCTGCAGGAACAGATCGTCTTCaa < 1:312867/150‑1 (MQ=255) gAGCCTGCCGTGGTGGCCGTGGAAGCGGATACCGGTACCGGCAAGACGGTAGCCTACAGCCTGGCTGCCATCCCGGCGGCCAAGGCC‑GCCGGCAAACGCCTGGTGATCGCCACGGCCACCGTGGCCCTGCAGGAACAGATCGTCTTCAAg > 1:1872716/1‑150 (MQ=255) ccTGCCGTGGTGGCCGTGGAAGCGGGCACCGGTACCGGCAAGACGGTAGCCTACAGCCTGGCTGCCATCCCGGCGGCCAAGGCC‑GCCGGCAAACGCCTGGTGATCGCCACGGCCACCGTGGCCCTGCAGGAACAGATCGTCTTCAAGGAc < 2:647036/150‑1 (MQ=255) ccTGCCGTGGTGGCCGTGGAAGCGGGCACCGGTACCGGCAAGACGGTAGCCTACAGCCTGGCTGCCATCCCGGCGGCCAAGGCC‑GCCGGCAAACGCCTGGTGATCGCCACGGCCACCGTGGCCCTGCAGGAACAGATCGTCTTCAAGGAc < 2:1450134/150‑1 (MQ=255) cTGCCGTGGTGGCCGTGGAAGCGGGCACCGGTACCGGCAAGACGGTAGCCTACAGCCTGGCTGCCATCCCGGCGGCCAAGGCC‑GCCGGCAAACGCCTGGTGATCGCCACGGCCACCGTGGCCCTGCAGGAACAGATCGTCTTCAAGGAcc < 1:1075846/150‑1 (MQ=255) cGTGGTGGCCGTGGAAGCGGGCACCGGCACCGGCAAGACGGTAGCCTACAGCCTGGCTGCCATCCCGGCGGCCAAGGCC‑GCCGGCAAACGCCTGGTGATCGCCACGGCCACCGTGGCCCTGCAGGAACAGATCGTCTTCAAg > 2:610636/1‑142 (MQ=255) cGTGGTGGCCGTGGAAGCGGGCACCGGCACCGGCAAGACGGTAGCCTACAGCCTGGCTGCCATCCCGGCGGCCAAGGCC‑GCCGGCAAACGCCTGGTGATCGCCACGGCCACCGTGGCCCTGCAGGAACAGATCGTCTTCAAg < 1:610636/142‑1 (MQ=255) ccGTGGAAGCGGGCACCGGTACCGGCAAGACGGTAGCCTACAGCCTGGCTGCCATCCCGGCGGCCAAGGCC‑GCCGGCAAACGCCTGGTGATCGCCACGGCCACCGTGGCCCTGCAGGAACAGATCGTCTTCAAGGACCTGCCCGACCTGa < 1:1928285/150‑1 (MQ=255) cGTGGAAGCGGGCACCGGTACCGGCAAGACGGTAGCCTACAGCCTGGCTGCCATCCCGGCGGTCAAGGCCGGCAGGAACAGGCCCAGCG‑CGGCGATGGGCTCGGTGGCCCTGCAGGAACAGATCGTCTTCAAGGACCTGGCCGACCTGAt > 1:1150604/1‑150 (MQ=255) cGTGGAAGCGGGCACCGGTACCGGCAAGACGGTAGCCTACAGCCTGGCTGCCATCCCGGCGGCCAAGGCC‑GCCGGCAAACGCCTGGTGATCGCCACGGCCACCGTGGCCCTGCAGGAACAGATCGTCTTCAAGGACCTGCCCGACCTGAt > 2:209111/1‑150 (MQ=255) cGTGGAAGCGGGCACCGGTACCGGCAAGACGGTAGCCTACAGCCTGGCTGCCATCCCGGCGGCCAAGGCC‑GCCGGCAAACGCCTGGTGATCGCCACGGCCACCGTGGCCCTGCAGGAACAGATCGTCTTCAAGGACCTGCCCGACCTGAt < 1:209111/150‑1 (MQ=255) ggAAGCGGGCACCGGTACCGGCAAGACGGTAGCCTACAGCCTGGCTGCCATCCCGGCGGCCAAGGCC‑GCCGGCAAACGCCTGGTGATCGCCACGGCCACCGTGGCCATGCAGCAACATGTCGTCTTCAAGGACCTGCCCGACCTGATgcg > 2:1171802/1‑150 (MQ=255) aaGCGGGCACCGGTACCGGCAAGACGGTAGCCTACAGCCTGGCTGCCATCCCGGCGGCCAAGGCC‑GCCGGCAAACGCCTGGTGATCGCCACGGCCACCGTGGCCCTGCAGGAACAGATCGTCTTCAAGGACCTGCCCGACCTGATGCgca < 2:1793448/150‑1 (MQ=255) aGCGGGCACCGGTACCGGCAAGACGGTAGCCTACAGCCTGGCTGCCATCCCGGCGGCCAAGGCC‑GCCGGCAAACGCCTGGTGAt < 1:1409243/84‑1 (MQ=255) aGCGGGCACCGGTACCGGCAAGACGGTAGCCTACAGCCTGGCTGCCATCCCGGCGGCCAAGGCC‑GCCGGCAAACGCCTGGTGAt > 2:1409243/1‑84 (MQ=255) gCGGGCACCGGTACCGGCAAGACGGTAGCCTACAGCCTGGCTGCCATCCCGGCGGCCAAGGCC‑GCCGGCAAACGCCTGGTGATCGCCACGGCCAc < 1:583157/95‑1 (MQ=255) gCGGGCACCGGTACCGGCAAGACGGTAGCCTACAGCCTGGCTGCCATCCCGGCGGCCAAGGCC‑GCCGGCAAACGCCTGGTGATCGCCACGGCCAc > 2:583157/1‑95 (MQ=255) ggCACCGGTACCGGCAAGACGGTAGCCTACAGCCTGGCTGCCATCCCGGCGGCCAAGGCC‑GCCGGCAAACGCCTGGTGATCGCCACGGCCACCGTGGCCCTGCAGGAACAGATCGTCTTCAAGGACCTGCCCGACCTGATGCGCagcagc < 1:1264178/150‑1 (MQ=255) aggTACCGGCAAGACGGTAGCCTACAGCCTGGCTGCCATCCCGGCGGCCAAGGCC‑GCCGGCAAACGCCTGGTGATCGCCACGGCCACCGTGGCCCTGCAGGAACAGATCGTCTTCAAGGACGTGCCCGACCTGATGCGCAGCAGCGGCCt > 1:696359/2‑150 (MQ=255) gTACCGGCAAGACGGTAGCCTACAGCCTGGCTGCCATCCCGGCGGCCAAGGCC‑GCCGGCAAACGCCTGGTGATCGCCACGGCCACCGTGGCCCTGCAGGAACAGATCGTCTTCAAGGACCTGCCCGACCTGATGCGCAGCAGCGGCCTCa > 2:1548524/1‑150 (MQ=255) tACCGGCAAGACGGTAGCCTACAGCCTGGCTGCCATCCCGGCGGCCAAGGCC‑GCCGGCAAACGCCTGGTGATCGCCACGGCCACCGTGGCCCTGCAGGAACAGATCGTCTTCAAGGACCTGCCCGACCTGATGCGCAGCAGCGGCCTCaa < 2:1582624/150‑1 (MQ=255) tACCGGCAAGACGGTAGCCTACAGCCTGGCTGCCATCCCGGCGGCCAAGGCC‑GCCGGCAAACGCCTGGTGATCGCCACGGCCACCGTGGCCCTGCAGGAACAGATCGTCTTCAAGGACCTGCCCGACCTGATGCGCAGCAGCGGCCTCaa < 1:1548524/150‑1 (MQ=255) tACCGGCAAGACGGTAGCCTACAGCCTGGCTGCCATCCCGGCGGCCAAGGCC‑GCCGGCAAACGCCTGGTGATCGCCACGGCCACCGTGGCCCTGCAGGAACAGATCGTCTTCAAGGACCTGCCCGACCTGATGCGCAGCAGCGGCCTCaa > 1:1858096/1‑150 (MQ=255) ccGGCAAGACGGTAGCCTACAGCCTGGCTGCCATCCCGGCGGCCAAGGCC‑GCCGGCAAACGCCTg > 2:70386/1‑65 (MQ=255) ccGGCAAGACGGTAGCCTACAGCCTGGCTGCCATCCCGGCGGCCAAGGCC‑GCCGGCAAACGCCTg < 1:70386/65‑1 (MQ=255) cGGCAAGACGGTAGCCTACAGCCTGGCTGCCATCCCGGCGGCCAAGGCC‑GCCGGCAAACGCCTGGTGATCGCCACGGCCACCGTGGCCCTGCAGGAACAGATCGTCTTCAAGGACCTGCCCGAc > 2:912031/1‑124 (MQ=255) cGGCAAGACGGTAGCCTACAGCCTGGCTGCCATCCCGGCGGCCAAGGCC‑GCCGGCAAACGCCTGGTGATCGCCACGGCCACCGTGGCCCTGCAGGAACAGATCGTCTTCAAGGACCTGCCCGAc < 1:912031/124‑1 (MQ=255) gtcttgccGGTAGCCTACAGCCTGGCTGCCATCCCGGCGGCCAAGGCC‑GCCGGCAAACGCCTGGTGATCGCCACGGCCACCGTGGCCCTGCAGGAACAGATCGTCTTCAAGGACCTGCCCGACCTGATGCGCAGCAGCGGCCTCAACTTc < 1:1082491/143‑1 (MQ=255) gCAAGACGGTAGCCTACAGCCTGGCTGCCATCCCGGCGGCCAAGGCC‑GCCGGCAAACGCCTGGTGATCGCCACGGCCACCGTGGCCCTGCAGGAACAGATCGTCTTCAAGGACCTGCCCGACCTGATGCGCAGCAGCGGCCTCAACTTCa < 2:1872716/150‑1 (MQ=255) gCAAGACGGTAGCCTACAGCCTGGCTGCCATCCCGGCGGCCAAGGCC‑GCCGGCAAACGCCTGGTGATCGCCACGGCCACCGTGGCCCTGCAGGAACAGATCGTCTTCAAGGACCTGCCCGACCTGATGCGCAGCAGCGGCCTCAACTTCa > 1:1359702/1‑150 (MQ=255) cAAGACGGTAGCCTACAGCCTGGCTGCCATCCCGGCGGCCAAGGCC‑GCCGGCAAACGCCTGGTGATCGCCACGGCCACCGTGGCCCTGCAGGAACAGATCGTCtt < 2:1136177/105‑1 (MQ=255) cAAGACGGTAGCCTACAGCCTGGCTGCCATCCCGGCGGCCAAGGCC‑GCCGGCAAACGCCTGGTGATCGCCACGGCCACCGTGGCCCTGCAGGAACAGATCGTCtt > 1:1136177/1‑105 (MQ=255) aCGGTAGCCTACAGCCTGGCTGCCATCCCGGCGGCCAAGGCC‑GCCGGCAAACGCCTGGTGATCGCCACGGCCACCGTGGCCCTGCAGGAACAGATCGTCTTCAAGGACCTGCCCGACCTGATGCGCAGCAGCGGCCTCAACTTCAGCTTc > 2:1989797/1‑150 (MQ=255) ccTACAGCCTGGCTGCCATCCCGGCGGCCAAGGCC‑GCCGGCAAACGCCTGGTGATCGCCACGGCCACCGTGGCCCTGCAGGAACAGATCGTCTTCAAGGACCTGCCCGACCTGATGCGCAGCAGCGGCCTCAACTTCAGCTTCGCCCTgg > 1:2378887/1‑150 (MQ=255) tACAGCCTGGCTGCCATCCCGGCGGCCAAGGCC‑GCCGGCAAACGCCTGGTGATCGCCACGGCCACCGTGGCCCTGCAGGAACAGATCGTCTTCAAGGACCTGc < 2:1231598/103‑1 (MQ=255) tACAGCCTGGCTGCCATCCCGGCGGCCAAGGCC‑GCCGGCAAACGCCTGGTGATCGCCACGGCCACCGTGGCCCTGCAGGAACAGATCGTCTTCAAGGACCTGc > 1:1231598/1‑103 (MQ=255) aCAGCCTGGCTGCCATCCCGGCGGCCAAGGCC‑GCCGGCAAACGCCTGGTGATCGCCACGGCCACCGTGGCCCTGCAGGAACAGATCGTCTTCAAGGACCTGCCCGACCTGATGCGCAGCAGCGGCCTCAACTTCAGCTTCGCCCTGGCCa > 2:1868208/1‑150 (MQ=255) tGGCTGCCATCCCGGCGGCCAAGGCC‑GCCGGCAAACGCCTGGTGATCGCCACGGCCACCGTGGCCCTGCAGGAACAGATCGTCTTCAAGGACCTGCCCGACCTGATGCGCAGCAGCGGCCTCAACTTCAGCTTCGCCCTGGCCAAGGGcc < 2:1042458/150‑1 (MQ=255) ggCTGCCATCCCGGCGGCCAAGGCC‑GCCGGCAAACGCCTGGTGATCGCCACGGCCACCGTGGCCCTGCAGGAACAGATCGTCTTCAAGGACCTGCCCGACCTGATGCGCAGCAGCGGCCTCAACTTCAGCTTCGCCCTGGCCAAGGGCCg < 1:1113848/150‑1 (MQ=255) tGCCATCCCGGCGGCCAAGGCC‑GCCGGCAAACGCCTGGTGATCGCCACGGCCACCGTGGCCCTGCAGGAACAGATCGTCTTCAAGGACCTGCCCGACCTGATGCGCAGCAGCGGCCTCAACTTCAGCTTCGCCCTGGCCAAGGGCCGTgg > 1:169261/1‑150 (MQ=255) tGCCATCCCGGCGGCCAAGGCC‑GCCGGCAAACGCCTGGTGATCGCCACGGCCACCGTGGCCCTGCAGGAACAGATCGTCTTCAAGGACCTGCCCGACCTGATGCGCAGCAGCGGCCTCAACTTCAGCTTCGCCCTGGCCAAGGGCCGTgg < 2:2012560/150‑1 (MQ=255) gCCATCCCGGCGGCCAAGGCC‑GCCGGCAAACGCCTGGTGATCGCCACGGCCACCGTGGCCCTGCAg > 1:950256/1‑66 (MQ=255) gCCATCCCGGCGGCCAAGGCC‑GCCGGCAAACGCCTGGTGATCGCCACGGCCACCGTGGCCCTGCAg < 2:950256/66‑1 (MQ=255) cATCCCGGCGGCCAAGGCC‑GCCGGCAAACGCCTGGTGATCGCCACGGCCACCGTGGCCCTGCAGGAACAGATCGTCTTCAAGGACCTGCCCGACCTGATGCGCAGCAGCGGc > 2:1177300/1‑112 (MQ=255) cATCCCGGCGGCCAAGGCC‑GCCGGCAAACGCCTGGTGATCGCCACGGCCACCGTGGCCCTGCAGGAACAGATCGTCTTCAAGGACCTGCCCGACCTGATGCGCAGCAGCGGc < 1:1177300/112‑1 (MQ=255) aTCCCGGCGGCCAAGGCC‑GCCGGCAAACGCCTGGTGATCGCCACGGCCACCGTGGCCCTGCAGGAACAGATCGTCTTCAAGGACCTGCCCGACCTGATGCGCAGCAGCGGCCTCAACTTCAGCTTCGCCCTGGCCAAGGGCCGTGGCCGc > 2:2024973/1‑150 (MQ=255) tCCCGGCGGCCAAGGCC‑GCCGGCAAACGCCTGGTGATCGCCACGGCCACCGTGGCCCTGCAGGAACAGATCGTCTTCAAGGACCTGCCCGACCTGATGCGCAGCAGCGGCCTCAACTTCAGCTTCGCCCTGGCCAAGGGCCGTGGCCGCt > 1:730710/1‑150 (MQ=255) tCCCGGCGGCCAAGGCC‑GCCGGCAAACGCCTGGTGATCGCCACGGCCACCGTGGCCCTGCAGGAACAGATCGTCTTCAAGGACCTGCCCGACCTAATGCGTAGCAGCGGCCTCAACTTCAGCTTCGCCCTGGCCAAGGGCCGTGGCCGCt < 1:1377259/150‑1 (MQ=255) tCCCGGCGGCCAAGGCC‑GCCGGCAAACGCCTGGTGATCGCAACGGCCACCGTGGCCCTGCAGGAACAGATCGTCTTCAAGGACCTGCCCGACCTGATGCGCAGCAGCGGCCTCAACTTCAGCTTCGCCCTGGCCAAGGGACGTGGCCGCt > 1:1138206/1‑150 (MQ=255) tCCCGGCGACCAAGGCC‑GCCGGCAAACGCCTGGTGATCGCCACGGCCACCGAGGCCCTGCAGGAACAGATCGTCTCCAAGGACCTGCCCCACCTGATGCGCAGCAGCGGCCTCAACTTCAGCTTCGCCCTGGCCAAGGGCCGTCGCCGCt > 2:954760/1‑150 (MQ=255) cggcggCCTTGGCC‑GCCGGCAAACGCCTGGTGATCGCCACGGCCACCGTGGCCCTGCAGGAACAGATCGTCTTCAAGGACCTGCCCGACCTGATGCGCAGCAGCGGCCTCAACTTCAGCTTCGCCCTGGCCAAGGGCCGTGGCCGCTATc > 2:1602324/1‑150 (MQ=255) cggcggCCTTGGCC‑GCCGGCAAACGCCTGGTGATCGCCACGGCCACCGTGGCCCTGCAGGAACAGATCGTCTTCAAGGACCTGCCCGACCTGATGCGCAGCAGCGGCCTCAACTTCAGCTTCGCCCTGGCCAAGGGCCGTGGCCGCTATc > 2:1364333/1‑150 (MQ=255) cggcggCCAAGGCC‑GCCGGCAAACGCCTGGTGATCGCCACGGCCACCGTGGCCCTGCAGGAACAGATCGTCTTCAAGGACCTGCCCGACCTGATGCGCAGCAGCGGCCTCAACTTCAGCTTCGCCCTGGCCAAGGGCCGTGGCCGCTATc > 2:1782758/1‑150 (MQ=255) ggcggcCAAGGCC‑GCCGGCAAACGCCTGGTGATCGCCACGGCCACCGTGGCCCTGCAGGAACAGATCGTCTTCAAGGACCTGCCCGAcc < 1:1116787/89‑1 (MQ=255) ggcggcCAAGGCC‑GCCGGCAAACGCCTGGTGATCGCCACGGCCACCGTGGCCCTGCAGGAACAGATCGTCTTCAAGGACCTGCCCGAcc > 2:1116787/1‑89 (MQ=255) gcggcCAAGGCC‑GCCGGCAAACGCCTGGTGATCGCCACGGCCACCGTGGCCCTGCAGGAACAGATCGTCTTCAAGGACCTGCCCGACCTGATGCGCAGCAGCGGCCTCAACTTCAGCTTCGCCCTGGCCAAGGGCCGTGGCCGCTATCtg > 1:1929047/1‑150 (MQ=255) gcCAAGGCC‑GCCGGCAAACGCCTGGTGATCGCCACGGCCACCGTGGCCCTGCAGGAACAGATCGTCTTCAAGGACGTGCCCGACCTGATGCGCAGCAGCGGCCTCAACTTCAGCTTCGCCCTGGCCAAGGGCCGTGGCCGCTATCTGTGc < 2:696359/150‑1 (MQ=255) gcCAAGGCC‑GCCGGCAAACGCCTGGTGATCGCCACGGCCACCGTGGCCCTGCAGGAACAGATCGTCTTCAAGGACCTGCCCGACCTGATGCGCAGCAGCGGCCTCAACTTCAGCTTCGCCCTGGCCAAGGGCCGTGGCCGCTATCTGTGc < 2:786250/150‑1 (MQ=255) ccAAGGCC‑GCCGGCAAACGCCTGGTGATCGCCACGGCCACCGTGGCCCTGCAGGAACAGATCGTCTTCAAGGACCTGCCCGACCTGATGCGCAGCAGCGGCCTCAACTTCAGCTTCGCCCTGGCCAAGGGCCGTGGCCGCTATCTGTGcc > 1:140387/1‑150 (MQ=255) aaGGCC‑GCCGGCAAACGCCTGGTGATCGCCACGGCCACCGTGGCCCTGCAGGACCAGATCGTCTTCAAGGACCTGCCCGACCTGATGCGCAGCAGCGGCCTCAACTTCAGCTTCGCCCTGGCCAAGGGCCGTGGCCGCTATCTGTGCCTg > 2:486431/1‑150 (MQ=255) aaGGCC‑GCCGGCAAACGCCTGGTGATCGCCACGGCCACCGTGGCCCTGCAGGAACAGATCGTCTTCAAGGACCTGCCCGACCTGATGCGCAGCAGCGGCCTCAACTTCAGCTTCGCCCTGGCCAAGGGCCGTGGCCGCTATCTGTGCCTg > 1:1243154/1‑150 (MQ=255) aGGCC‑GCCGGCAAACGCCTGGTGATCGCCACGGCCACCGTGGCCCTGCAGGAACAGATCGTCTTCAAGGACCTGCCCGACCTGATGCGCAGCAGCGGCCTCAACTTCAGCTTCGCCCTGGCCAAGGGCCGTGGCCGCTATCTGTGCCTGt < 2:1243154/150‑1 (MQ=255) | GATCGCCGAAGTGGCCAAGGTGCTTGGCGACATTGCCTGCGACGATGAAGGCCGCCGCGCTGGCGAGCCTGCCGTGGTGGCCGTGGAAGCGGGCACCGGTACCGGCAAGACGGTAGCCTACAGCCTGGCTGCCATCCCGGCGGCCAAGGCC‑GCCGGCAAACGCCTGGTGATCGCCACGGCCACCGTGGCCCTGCAGGAACAGATCGTCTTCAAGGACCTGCCCGACCTGATGCGCAGCAGCGGCCTCAACTTCAGCTTCGCCCTGGCCAAGGGCCGTGGCCGCTATCTGTGCCTGT > NC_002947/1286719‑1287014 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |