| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,311,328 | C→G | 5.4% | A71P (GCA→CCA) | PP_1144 ← | membrane protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,311,328 | 0 | C | G | 5.4% | 271.9 / 4.5 | 85 | A71P (GCA→CCA) | PP_1144 | membrane protein |
| Reads supporting (aligned to +/- strand): ref base C (36/44); new base G (2/3); total (38/47) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 | |||||||||||
TTGCTGCGTTCGAGGCTGTGCATGGCCAACCAGGCCACGCCCAGTGCGATGAGCAGTGAAAGAATGGTCAGGGATACGTCGTAGTGCACGTCCACCGGGGCCCGAAAGGCCAGCATGCTGATGAAATGCATGGCCCATATGCCGCCTGCCAGGCAGCAGGCTCCAAGCATGTTCCATTGTCGGTGGGCGGTGGGGTCGTCGCTGTGGGACTGACGCTCGGCCATGTCGAGCGTGGCGAAACAGGCCGCGCAAGCAACGAAATAGGCGAGCAGAACCAAGAGCGGTTCATGAC > NC_002947/1311180‑1311471 | ttGCTGCGTTCGAGGCTGTGCATGGCCAACCAGGCCACGCCCAGTGCGATGAGCAGTGAAAGAATGGTCAGGGATACGTCGTAGTGCACGTCCACCGGGGCCCGAAAGGCCAGCATGCTGATGAAATGCATGGCCCATATGCCGCCTGcc > 1:2139470/1‑150 (MQ=255) tgctgcGTTCGAGGCTGTGCATGGCCAACCAGGCCACGCCCAGTGCGATGAGCAGTGAAAGAATGGTCAGGGATACGTCGTAGTGCACGTCCACCGGGGCCCGAAAGGCCAGCATGCTGATGAAATGCATGGCCCATATGCCGCCTGCCa < 1:2040792/150‑1 (MQ=255) gctgcGTTCGAGGCTGTGCATGGCCAACCAGGCCACGCCCAGTGCGATGAGCAGTGAAAGAATGGTCAGGGATACGTCGTAGTGCACGTCCACCGGGGCCCGAAAGGCCAGCATGCTGATGAAATGCATGGCCCATATGCCGCCTGCCAg < 2:1173843/150‑1 (MQ=255) tgcGTTCGAGGCTGTGCATGGCCAACCAGGCCACGCCCAGTGCGATGAGCAGTGAAAGAATGGTCAGGGATACGTCGTAGTGCACGTCCACCGGGGCCCGAAAGGCCAGCATGCTGATGAAATGCATGGCCCATATGCCGCCTGCCAGgc < 1:945599/150‑1 (MQ=255) ttCGAGGCTGTGCATGGCCAACCAGGCCACGCCCAGTGCGATGAGCAGTGAAAGAATGGTCAGGGATACGTCGTAGTGCACGTCCACCGGGGCCCGAAAGGCCAGCATGCTGATGAAATGCATGGCCCATATGCTGCCTGGCAGgcg < 1:465564/147‑2 (MQ=255) ttCGAGGCTGTGCATGGCCAACCAGGCCACGCCCAGTGCGATGAGCAGTGAAAGAATGGTCAGGGATACGTCGTAGTGCACGTCCACCGGGGCCCGAAAGGCCAGCATGCTGATGAAATGCATGGCCCATATGCTGCCTGGCAGgcg > 2:465564/1‑146 (MQ=255) ttCGAGGCTGTGCATGGCCAACCAGGCCACGCCCAGTGCGATGAGCAGTGAAAGAATGGTCAGGGATACGTCGTAGTGCACGTCCACCGGGGCCCGAAAGGCCAGCATGCTGATGAAATGCATGGCCCATATGCCGCCTGCCAGgcagca > 1:1037334/1‑150 (MQ=255) cGAGGCTGTGCATGGCCAACCAGGCCACGCCCAGTGCGATGAGCAGTGAAAGAATGGTCAGGGATACGTCGTAGTGCACGTCCACCGGGGCCCGAAAGGCCAGCATGCTGATGAAATGCATGGCCCATATGCCGCCTGCCAGGCAGCAgg < 2:652533/150‑1 (MQ=255) aGGCTGTGCATGGCCAACCAGGCCACGCCCAGTGCGATGAGCAGTGAAAGAATGGTCAGGGATACGTCGTAGTGCACGTCCACCGGGGCCCGAAAGGCCAGCATGCTGATGAAATGCATGGCCCATATGCTGCCTGGCAGgcggcatatg < 1:962811/150‑5 (MQ=255) aGGCTGTGCATGGCCAACCAGGCCACGCCCAGTGCGATGAGCAGTGAAAGAATGGTCAGGGATACGTCGTAGTGCACGTCCACCGGGGCCCGAAAGGCCAGCATGCTGATGAAATGCATGGCCCATATGCCGCCTGCCAGGCAGCAGGCt < 2:1435534/150‑1 (MQ=255) aGGCTGTGCATGGCCAACCAGGCCACGCCCAGTGCGATGAGCAGTGAAAGAATGGTCAGGGATACGTCGTAGTGCACGTCCACCGGGGCCCGAAAGGCCAGCATGCTGATGAAATGCATGGCCCATATGCCGCCTGCCAGGCAGCAGGCt > 1:493115/1‑150 (MQ=255) tgtgCATGGCCAACCAGGCCACGCCCAGTGCGATGAGCAGTGAAAGAATGGTCAGGGATACGTCGTAGTGCACGTCCACCGGGGCCCGAAAGGCCAGCATGCTGATGAAATGCATGGCCCATATGCCGCCTGCCAGGCAGCAGGCTCCaa < 2:2139470/150‑1 (MQ=255) tgtgCATGGCCAACCAGGCAACGCCTAGTGCTACGAGCAGTGAAACAATGGTTAGTGATACGTCGTAGTGCACGTCCACCGGGGCCCGAAAGGCCAGCATGCTGATGAAATGCATGGCCCATATGCCGCCTGCCAGGCAGCAGGCTTCag < 1:1289962/150‑2 (MQ=255) cATGGCCAACCAGGCCACGCCCAGTGCGATGAGCAGTGAAAGAATGGTCAGGGATACGTCGTAGTGCACGTCCACCGGGGCCCGAAAGGCCAGCATGCTGATGAAATGCATGGCCCATATGCCGCCTGCCAGGCAGCAGGCTCCAAGCAt > 2:647158/1‑150 (MQ=255) gCCAACCAGGCCACGCCCAGTGCGATGAGCAGTGAAAGAATGGTCAGGGATACGTCGTAGTGCACGTCCACCGGGGCCCGAAAGGCCAGCATGCTGATGAAATGCATGGCCCATATGCCGCCTGCCAGGCAGCAGGCTCCAAGCATGTTc < 1:1349415/150‑1 (MQ=255) gCCAACCAGGCCACGCCCAGTGCGATGAGCAGTGAAAGAATGGTCAGGGATACGTCGTAGTGCACGTCCACCGGGGCCCGAAAGGCCAGCATGCTGATGAAATGCATGGCCCATATGCCGCCTGCCAGGCAGCAGGCTCCAAGCATGTTc > 1:1157050/1‑150 (MQ=255) aCCAGGCCACGCCCAGTGCGATGAGCAGTGAAAGAATGGTCAGGGATACGTCGTAGTGCACGTCCACCGGGGCCCGAAAGGCCAGCATGCTGATGAAATGCATGGCCCATATGCCGCCTGCCAGGCAGCAGGCTCCAAGCATGTTCCAtt > 1:856976/1‑150 (MQ=255) aCGCCCAGTGCGATGAGCAGTGAAAGAATGGTCAGGGATACGTCGTAGTGCACGTCCACCGGGGCCCGAAAGGCCAGCATGCTGATGAAATGCATGGCCCATATGCCGCCTGCCAGGCAGCAGGCTCCAAGCATGTTCCATTGTcggtgg < 1:411896/150‑1 (MQ=255) cccAGTGCGATGAGCAGTGAAAGAATGGTCAGGGATACGTCGTAGTGCCCGTCCACCGGGGCCCGAAAGGCCAGCATGCTGATGAAATGCATGGCCCATATGCCGCCTGCCAGGCAGCAGGCTCCAAGCATGTTCCATTGTcggtgggcg > 2:286916/1‑150 (MQ=255) cAGTGCGATGAGCAGTGAAAGAATGGTCAGGGATACGTCGTAGTGCACGTCCACCGGGGCCCGAAAGGCCAGCATGCTGATGAAATGCATGGCCCATATGCCGCCTGCCAGGCAGCAGGCTCCAAGCATGTTCCATTGTcggtgggcggt < 1:167426/150‑1 (MQ=255) aGTGCGATGAGCAGTGAAAGAATGGTCAGGGATACGTCGTAGTGCACGTCCACCGGGGCCCGAAAGGCCAGCATGCTGATGAAATGCATGGCCCATATGCCGCCTGCCAGGCAGCAGGCTCCAAGCATGTTCCATTGTcggtgggcggtg < 2:493115/150‑1 (MQ=255) gTGCGATGAGCAGTGAAAGAATGGTCAGGGATACGTCGTAGTGCACGTCCACCGGGGCCCGAAAGGCCAGCATGCTGATGAAATGCATGGCCCATATGCCGCCTGCCAGGCAGCAGGCTCCAAGCATGTTCCATTGTcggtgggcggtgg < 2:1039233/150‑1 (MQ=255) gTGCGATAAGCAGTGAAAGAATGGTCAGGGATACGTCGTAGTGCACGTCCACCGGGGCCCGAAATGCCAGGATGCTACCACACTGCATGGCCCATATGCCGCCTGCCAGGCAGCAGGCTCCAAGCATGTTCCATTGTcggtgggcggtgg < 1:1976357/150‑1 (MQ=255) tGCGATGAGCAGTGAAAGAATGGTCAGGGATACGTCGTAGTGCACGTCCACCGGGGCCCGAAAGGCCAGCATGCTGATGAAATGCATGGCCCATATGCCGCCTGCCAGGCAGCAGGCTCCAAGCATGTTCCATTGTcggtgggcggtggg < 1:780918/150‑1 (MQ=255) tGCGATGAGCAGTGAAAGAATGGTCAGGGATACGTCGTAGTGCACGTCCACCGGGGCCCGAAAGGCCAGCATGCTGATGAAATGCATGGCCCATATGCCGCCTGCCAGGCAGCAGGCTCCAAGCATGTTCCATTGTcggtgggcggtggg < 1:1662240/150‑1 (MQ=255) aGTGAAAGAATGGTCAGGGATACGTCGTAGTGCACGTCCACCGGGGCCCGAAAGGCCAGCATGCTGATGAAATGCATGGCCCATATGCCGCCTGCCAGgca < 2:673362/101‑1 (MQ=255) aGTGAAAGAATGGTCAGGGATACGTCGTAGTGCACGTCCACCGGGGCCCGAAAGGCCAGCATGCTGATGAAATGCATGGCCCATATGCCGCCTGCCAGgca > 1:673362/1‑101 (MQ=255) gAAAGAATGGTTAGGGATACGTCGTAGTGCACGTCCACCGGGGCCCGAAAGGCCAGCATGCTGATGAAATGCATGGACAATCTGCCGCCTGCCAGGCAGCAGGCTTCAAGCATGTTCCATTGTCGGTGGGCGGTGGGGTCGTCGCTGTgg < 1:781646/150‑1 (MQ=255) aaaGAATGGTCAGGGATACGTCGTAGTGCACGTCCACCGGGGCCCGAAAGGCCAGCATGCTGATGAAATGCATGGCCCATATGCCGCCTGCCAGGCAGCAGGCTCCAAGCATGTTCCATTGTCGGTGGGCGGTGGGgtc < 1:2001458/139‑1 (MQ=255) aaaGAATGGTCAGGGATACGTCGTAGTGCACGTCCACCGGGGCCCGAAAGGCCAGCATGCTGATGAAATGCATGGCCCATATGCCGCCTGCCAGGCAGCAGGCTCCAAGCATGTTCCATTGTCGGTGGGCGGTGGGgtc > 2:2001458/1‑139 (MQ=255) aaaGAATGGTCAGGGATACGTCGTAGTGCACGTCCACCGGGGCCCGAAAGGCCAGCATGCTGATGAAATGCATGGCCCATATGCCGCCTGCCAGGCAGCAGGCTCCAAGCATGTTCCATTGTCGGTGGGCGGTGGGGTCGTCGCTGTggg > 1:78743/1‑150 (MQ=255) aaGAATGGTTAGGGATACGTCGTAGTGCACGTCCACCGGGGCCCGAAAGGCCAGCATGCTGATGAAATGCATGGCCCATATGCCGCCTGCCAGGCAGCAGGCTCCAAGCATGTTCCATTGTCGGTGGGCGGTGGGGTCGTCGCTGTGGGa > 2:2304542/1‑150 (MQ=255) aaGAATGGTCAGGGATACGTCGTAGTGCACGTCCACCGGGGCCCGAAAGGCCAGCATGCTGATGAAATGCATGGCCCATATGCCGCCTGCCAGGCAGCAGGCTCCAAGCATGTTCCATTGTCGGTGGGCGGTGGGGTCGTCGCTGTGGGa > 1:133791/1‑150 (MQ=255) tGGTCAGGGATACGTCGTAGTGCACGTCCACCGGGGCCCGAAAGGCCAGCATGCTGATGAAATGCATGGCCCATATGCCGCCTGCCAGGCAGCAGGCTCCAAGCATGTTCCATTGTCGGTGGGCGGTGGGGTCGTCGCTGTGGGACTGAc < 1:1282762/150‑1 (MQ=255) tGGTCAGGGATACGCCATAGTGAACGTCCCCCGGGTCCCGAAAGGCCAGCATCCCGACGCAGCGCGTACCTCATAGGCCGCCTGCCAGGCAGCAGGCTCCAAGCATGTTCCATTGTCGGTGGGCGGTGGGGTCGTCGCTGTGGGACTGAc < 1:44456/150‑1 (MQ=255) ggATACGTCGTAGTGCACGTCCACCGGGGCCCGAAAGGCCAGCATGCTGATGAAATGCATGGCCCATATGCCGCCTGCCAGGCAGCAGGCTCCAAGCATGTTCCATTGTCGGTGGGCGGTGGGGTCGTCGCTGTGGGACTGACGCTCGGc > 1:2128252/1‑150 (MQ=255) ggATACGTCGTAGTGCACGTCCACCGGGGCCCGAAAGGCCAGCATGCTGATGAAATGCATGGCCCATATGCCGCCTGCCAGGCAGCAGGCTCCAAGCATGTTCCATTGTCGGTGGGCGGTGGGGTCGTCGCTGTGGGACTGACGCTCGGc > 1:869936/1‑150 (MQ=255) aTACGTCGTAGTGCACGTCCACCGGGGCCCGAAAGGCCAGCATGCTGATGAAATGCATGGCCCATATGCCGCCTGCCAGGCAGCAGGCTCCAAGCATGTTCCATTGTCGGTGGGCGGTGGGGTCGTCGCTGTGGGACTGACGCTCGGCCa > 2:84481/1‑150 (MQ=255) gtcgtAGTGCACGTCCACCGGGGCCCGAAAGGCCAGCATGCTGATGAAATGCATGGCCCATATGCCGCCTGCCAGGCAGCAGGCTCCAAGCATGTTCCa < 2:423090/99‑1 (MQ=255) gtcgtAGTGCACGTCCACCGGGGCCCGAAAGGCCAGCATGCTGATGAAATGCATGGCCCATATGCCGCCTGCCAGGCAGCAGGCTCCAAGCATGTTCCa > 1:423090/1‑99 (MQ=255) gtcgtAGTGCACGTCCACCGGGGCCCGAAAGGCCAGCATGCTGATGAAATGCATGGCCCATATGCCGCCTGCCAGGCAGCAGGCTCCAAGCATGTTCCATTGTc > 2:2202824/1‑104 (MQ=255) gtcgtAGTGCACGTCCACCGGGGCCCGAAAGGCCAGCATGCTGATGAAATGCATGGCCCATATGCCGCCTGCCAGGCAGCAGGCTCCAAGCATGTTCCATTGTc < 1:2202824/104‑1 (MQ=255) gtcgtAGTGCACGTCCACCGGGGCCCGAAAGGCCAGCATGCTGATGAAATGCATGGCCCATATGCCGCCTGCCAGGCAGCAGGCTCCAAGCATGTTCCATTGTCGGTGGGCGGTGGGgtcgtc < 2:1277824/123‑1 (MQ=255) gtcgtAGTGCACGTCCACCGGGGCCCGAAAGGCCAGCATGCTGATGAAATGCATGGCCCATATGCCGCCTGCCAGGCAGCAGGCTCCAAGCATGTTCCATTGTCGGTGGGCGGTGGGgtcgtc > 1:1277824/1‑123 (MQ=255) gtcgtAGTGCACGTCCACCGGGGCCCGAAAGGCCAGCATGCTGATGAAATGCATGGCCCATATGCCGCCTGCCAGGCAGCAGGCTCCAAGCATGTTCCATTGTCGGTGGGCGGTGGGGTCGTCGCTGTGGGACTGACGCTCGGCCATGTc > 2:1552730/1‑150 (MQ=255) gtcgtAGTGCACGTCCACCGGGGCCCGAAAGGCCAGCATGCTGATGAAATGCATGGCCCATATGCCGCCTGCCAGGCAGCAGGCTCCAAGCATGTTCCATTGTCGGTGGGCGGTGGGGTCGTCGCTGTGGGACTGACGCTCGGCCATGTc > 1:1913065/1‑150 (MQ=255) gtAGTGCACGTCCACCGGGGCCCGAAAGGCCAGCATGCTGATGAAATGCATGGCCCATATGCCGCCTGCCAGGCAGCAGGCTCCAAGCATGTTCCATTGTCGGTGGGCGGTGGGGTCCTGTCTGTTGGACTGACGCTCGGCCATGTCGAg < 1:674377/150‑1 (MQ=255) tAGTGCACGTCCACCGGGGCCCGAAAGGCCAGCATGCTGATGAAATGCATGGCCCATATGCCGCCTGCCAGGCAGCAGGCTCCAAGCATGTTCCATTGTCGGTGGGCGGTGGGGTCGTCGCTGTgg < 1:156857/126‑1 (MQ=255) tAGTGCACGTCCACCGGGGCCCGAAAGGCCAGCATGCTGATGAAATGCATGGCCCATATGCCGCCTGCCAGGCAGCAGGCTCCAAGCATGTTCCATTGTCGGTGGGCGGTGGGGTCGTCGCTGTgg > 2:156857/1‑126 (MQ=255) cACGTCCACCGGGGCCCGAAAGGCCAGCATGCTGATGAAATGCATGGCCCATATGCCGCCTGCCAGGCAGCAgg > 2:1885809/1‑74 (MQ=255) cACGTCCACCGGGGCCCGAAAGGCCAGCATGCTGATGAAATGCATGGCCCATATGCCGCCTGCCAGGCAGCAgg < 1:1885809/74‑1 (MQ=255) gTCCACCGGGGCCCGAAAGGCCAGCATGCTGATGAAATGCATGGCCCATATGCCGCCTGCCAGGCAGCAGGCTCCAAGCATGTTCCATTGTCGGTGGGCGGTGGGGTCGTCGCTGTGGGACTGACGCTCgg > 1:1558406/1‑131 (MQ=255) gTCCACCGGGGCCCGAAAGGCCAGCATGCTGATGAAATGCATGGCCCATATGCCGCCTGCCAGGCAGCAGGCTCCAAGCATGTTCCATTGTCGGTGGGCGGTGGGGTCGTCGCTGTGGGACTGACGCTCgg < 2:1558406/131‑1 (MQ=255) gTCCACCGGGGCCCGAAAGGCCAGCATGCTGATGAAATGCATGGCCCATATGCCGCCTGCCAGGCAGCAGGCTCCAAGCATGTTCCATTGTCGGTGGGCGGTGGGGTCGTCGCTGTGGGACTGACGCTCGGCCATGTCGAGCGTGGCGaa > 2:1017600/1‑150 (MQ=255) cACCGGGGCCCGAAAGGCCAGCATGCTGATGAAATGCATGGCCCATATGCCGCCTGCCAGGCAGCAGGCTCCAAGCATGTTCCATTGTCGGTGGGCGGTGGGGTCGTCGCTGTGGGACTGACGCTCGGCCATGt > 1:280208/1‑134 (MQ=255) cACCGGGGCCCGAAAGGCCAGCATGCTGATGAAATGCATGGCCCATATGCCGCCTGCCAGGCAGCAGGCTCCAAGCATGTTCCATTGTCGGTGGGCGGTGGGGTCGTCGCTGTGGGACTGACGCTCGGCCATGt < 2:280208/134‑1 (MQ=255) aCCGGGGCCCGAAAGGCCAGCATGCTGATGAAATGCATGGCCCATATGCCGCCCGCCAGGCAGCAGGCTCCAAGCATGTTCCATTGTCGGTGGGCGGTGGGGTCGTCGCTGTGGGACTGACGCTCGGCCATGTCGAGCGTGGCGAAACAg < 1:1029628/150‑1 (MQ=255) ccGGGGCCCGAAAGGCCAGCATGCTGATGAAATGCATGGCCCATATGCCGCCTGCCAGGCAGCAGGCTCCAAGCATGTTCCATTGTCGGTGGGCGGTGGGGTCGTCGCTGTGGGACTGACGCTCGGCCATGTCGAGCGTGGCGAAACAgg < 1:286916/150‑1 (MQ=255) cccGAAAGGCCAGCATGCTGATGAAATGCATGGCCCATATGCCGCCTGCCAGGCAGCAGGCTCCAAGCATGTTCCATTGTCGGTGGGCGGTGGGGTCGTCGCTGTGGGACTGACGCTCGGCCATGTCGAGCGTg > 2:562174/1‑134 (MQ=255) cccGAAAGGCCAGCATGCTGATGAAATGCATGGCCCATATGCCGCCTGCCAGGCAGCAGGCTCCAAGCATGTTCCATTGTCGGTGGGCGGTGGGGTCGTCGCTGTGGGACTGACGCTCGGCCATGTCGAGCGTg < 1:562174/134‑1 (MQ=255) ccGAAAGGCCAGCATGCTGATGAAATGCATGGCCCATATGCCGCCTGCCAGGCAGCAGGCTCCAAGCATGTTCCATTGTc < 2:142438/80‑1 (MQ=255) ccGAAAGGCCAGCATGCTGATGAAATGCATGGCCCATATGCCGCCTGCCAGGCAGCAGGCTCCAAGCATGTTCCATTGTc > 1:142438/1‑80 (MQ=255) cGAAAGGCCAGCATGCTGATGAAATGCATGGCCCATATGCCGCCTGCCAGGCAGCAGGCTCCAAGCATGTTCCATTGTCGGTGGGCGGTgggg > 2:1758447/1‑93 (MQ=255) cGAAAGGCCAGCATGCTGATGAAATGCATGGCCCATATGCCGCCTGCCAGGCAGCAGGCTCCAAGCATGTTCCATTGTCGGTGGGCGGTgggg < 1:1758447/93‑1 (MQ=255) cATGCTGATGAAATGCATGGCCCATATGCCGCCTGCCAGGCAGCAGGCTCCAAGCATGTTCCATTGTCGGTGGGCGGTGGGGTCGTCGCTGTGGGACTGACGCTCGGCCATGTCGAGCGTGGCGAAACAGGCCGCGCAAGCAACGAAATa < 2:856976/150‑1 (MQ=255) gCTGATGAAATGCATGGCCCATATGCCGCCTGCCAGGCAGCAGGCTCCAAGCATGTTCCATTGTCGGTGGGCGGTGGGGTCGTCGCTGTGGGACTGACGCTCGGCCATGTCGAGCGTGGCGAAACAGGCCGCGCAAGCAACGAAATAGGc < 1:1017600/150‑1 (MQ=255) gCTGATGAAATGCATGGCCCATATGCCGCCTGCCAGGCAGCAGGCTCCAAGCATGTTCCATTGTCGGTGGGCGGTGGGGTCGTCGCTGTGGGACTGACGCTCGGCCATGTCGAGCGTGGCGAAACAGGCCGCGCAAGCAACGAAATAGGc < 1:647158/150‑1 (MQ=255) tgatgaAATGCATGGCCCATATGCCGCCTGCCAGGCAGCAGGCTCCAAGCATGTTCCATTGTCGGTGGGCGGTGGGGTCGTCGCTGTGGGACTGACGCTCGGCCATGTCGAGCGTGGCGAAACAg < 1:404477/125‑1 (MQ=255) tgatgaAATGCATGGCCCATATGCCGCCTGCCAGGCAGCAGGCTCCAAGCATGTTCCATTGTCGGTGGGCGGTGGGGTCGTCGCTGTGGGACTGACGCTCGGCCATGTCGAGCGTGGCGAAACAg > 2:404477/1‑125 (MQ=255) tgatgaAATGCATGGCCCATATGCCGCCTGCCAGGCAGCAGGCTCCAAGCATGTTCCATTGTCGGTGGGCGGTGGGGTCGTCGCTGTGGGACTGACGCTCGGCCATGTCGAGCGTGGCGAAACAGGCCGCGCAAGCAACGAAATAGGCGa > 2:1381070/1‑150 (MQ=255) ggaAAGGCAAGGCCCACATGCCGCGTGCCAGGCAGCAGGCTCCAAGCATGTTCCATTGTCGGTGGGCGGTGGGGTCGTCGCTGTGGGACTGACGCTCGGCCATGTCGAGCGTGGCGAAACAGGCCGCGCAAGCAACGAAATAGGCGAGCa < 2:133791/149‑1 (MQ=255) aaTGCATGGCCCATATGCCGCCTGCCAGGCAGCAGGCTCCAAGCATGTTCCATTGTCGGTGGGCGGTGGGGTCGTCGCTGTGGGACTGACGCTCGGCCATGTCGAGCGTGGCGAAACAGGCCGCGCAAGCAACGAAATAGGCGAGCAGaa > 2:1340368/1‑150 (MQ=255) aTGGCCCATATGCCGCCTGCCAGGCAGCAGGCTCCAAGAATGTTCCATTGTCGGTGGGCGGTGGGGTCGTCGCTGTGGGACTGACGCTCGGCCATGTCGAGCGTGGCGAAACAGGCCGCGCAAGCAACGAAATAGGCGAGCAGAACCAag > 2:1392253/1‑150 (MQ=255) tGGCCCATATGCCGCCTGCCAGGCAGCAGGCTCCAAGCATGTTCCATTGTCGGTGGGCGGTGGGGTCGTCGCTGTGGGACTGACGCTCGGCCATGTCGAGCGTGGCGAAACAGGCCGCGCAAGCAACGAAATAGGCGAGCAGAACCAaga > 1:2165064/1‑150 (MQ=255) gggCCCATATGCCGGCTGCCAGGCAGCAGGCTCCAAGCATGTTCCATTGTCGGTGGGCGGTGGGGTCGTCGCTGTTGGACGGCCGCTCGGCCATGTCGAGCGTGGCGAAACAGGCCGCGCAAGCAACGAAATAGGCGAGCAGAACCAaga < 2:273017/149‑1 (MQ=255) gCCCATATGCCGCCTGCCAGGCAGCAGGCTCCAAGCATGTTCCATTGTCGGTGGGCGGTGGGGTCGTCGCTGTGGGACTGACGCTCGGCCATGTCGAGCGTGGCGAAACAGGCCGCGCAAGCAACGAAATAGGCGAGCAGAACCAAGAGc > 2:2008657/1‑150 (MQ=255) ccATATGCCGCCTGCCAGGCAGCAGGCTCCAAGCATGTTCCATTGTCGGTGGGCGGTGGGGTCGTCGCTGTGGGACTGACGCTCGGCCATGTCGAGCGTGGCGAAACAGGCCGCGCAAGCAACGAAATAGGCGAGCAGAACCAAGAGCgg < 1:1340368/150‑1 (MQ=255) gcctgctgccTGGCAGGCAGCAGGCTCCAAGCATGTTCCATTGTCGGTGGGCGGTGGGGTCGTCGCTGTGGGACTGACGCTCGGCCATGTCGAGCGTGGCGAAACAGGCCGCGCAAGCAACGAAATAGGCGAGCAGAACCAagag > 2:355921/8‑145 (MQ=255) gcctgctgccTGGCAGGCAGCAGGCTCCAAGCATGTTCCATTGTCGGTGGGCGGTGGGGTCGTCGCTGTGGGACTGACGCTCGGCCATGTCGAGCGTGGCGAAACAGGCCGCGCAAGCAACGAAATAGGCGAGCAGAACCAagag < 1:355921/138‑1 (MQ=255) atatGCCGCCTGCCAGGCAGCAGGCTCCAAGCATGtt < 1:189001/37‑1 (MQ=255) atatGCCGCCTGCCAGGCAGCAGGCTCCAAGCATGtt > 2:189001/1‑37 (MQ=255) atatGCCGCCTGCCAGGCAGCAGGCTCCAAGCATGTTCCATTGTCGGTGGGCGGTGGGGTCGTCGCTGTGGGACTGACGCTCGGCCATGTCGAGCGTGGCGAAACAGGCCGCGCAAGCAAc < 1:1850610/121‑1 (MQ=255) atatGCCGCCTGCCAGGCAGCAGGCTCCAAGCATGTTCCATTGTCGGTGGGCGGTGGGGTCGTCGCTGTGGGACTGACGCTCGGCCATGTCGAGCGTGGCGAAACAGGCCGCGCAAGCAAc > 2:1850610/1‑121 (MQ=255) atatGCCGCCTGCCAGGCAGCAGGCTCCAAGCATGTTCCATTGTCGGTGGGCGGTGGGGTCGTCGCTGTGGGACTGACGCTCGGCCATGTCGAGCGTGGCGAAACAGGCCGCGCAAGCAACGAAATAGGCGAGCAGAACCAAGAGCGGtt > 2:1260176/1‑150 (MQ=255) ccgccTGCCAGGCAGCAGGCTCCAAGCATGTTCCATTGTCGGTGGGCGGTGGGGTCGTCGCTGTGGGACTGACGCTCGGCCATGTCGAGCGTGGCGAAACAGGCCGCGCAAGCAACGAAATAGGCGAGCAGAACCAAGAGCGGTTCATGa < 1:1260176/150‑1 (MQ=255) cgccTGCCAGGCAGCAGGCTCCAAGCATGTTCCATTGTCGGTGGGCGGTGGGGTCGTCGCTGTGGGACTGACGCTCGGCCATGTCGAGCGTGGCGAAACAGGCCGCGCAAGCAACGAAATAGGCGAGCAGAACCAAGAGCGGTTCATGAc < 2:1785592/150‑1 (MQ=255) | TTGCTGCGTTCGAGGCTGTGCATGGCCAACCAGGCCACGCCCAGTGCGATGAGCAGTGAAAGAATGGTCAGGGATACGTCGTAGTGCACGTCCACCGGGGCCCGAAAGGCCAGCATGCTGATGAAATGCATGGCCCATATGCCGCCTGCCAGGCAGCAGGCTCCAAGCATGTTCCATTGTCGGTGGGCGGTGGGGTCGTCGCTGTGGGACTGACGCTCGGCCATGTCGAGCGTGGCGAAACAGGCCGCGCAAGCAACGAAATAGGCGAGCAGAACCAAGAGCGGTTCATGAC > NC_002947/1311180‑1311471 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |