Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 1,416,874 T→A 9.5% L39Q (CTG→CAG)  PP_1239 → metallo‑beta‑lactamase family protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029471,416,8740TA 9.5% 326.6 / 19.8 107L39Q (CTG→CAG) PP_1239metallo‑beta‑lactamase family protein
Reads supporting (aligned to +/- strand):  ref base T (53/43);  new base A (6/4);  total (60/47)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.82e-01

Only 100 of 109 total aligned reads displayed.

CGTGCTGAGCGCTATTCAGGACCACCTGGGCTAAGTGCGCTTCGCGGTACTCGGAAGCGGCAGCCAAGGGAACGGCACGCTGATCGCCAGTGGTGACACGTTCATCCTGGTCGATTGCGGCTTTTCCCTGCGTGAAACCGAGCGGCGCCTGGCGCTGCTCGGGGTTTCTGCAGCTCAGCTCAGTGCAGTGCTGGTCA‑CCCACGAACATGCCGACCACGTGCATGGGGTCGGCTTGCTGTCACGGCGCTACAATGTACCGGTCTACCTCAGCCAAGGGACTTTGCGCGGCATGCGCAAGC  >  NC_002947/1416725‑1417023
                                                                                                                                                     |                                                                                                                                                      
          gcTATTCAGGACCACCTGGGCTAAGTGCGCTTCGCGGCACTCGGAAGCGGCAGCCAAGGGAACGGCACGCTGATCGCCAGTGGTGACACGTTCATCCTGGTCGATTGCGGCTTTTCCCTGCGTGAAACCGAGCGGCGCCTGGCGCTGCTc                                                                                                                                              <  1:21425/150‑1 (MQ=255)
           cTATTCAGGACCACCTGGGCTAAGTGCGCTTCGCGGTACTCGGAAGCGGCAGCCAAGGGAACGGCACGCTGATCGCCAGTGGTGACACGTTCATCCTGGTCGATTGCGGCTTTTCCCTGCGTGAAACCGAGCAGCGCCAGGCGCCGCTc                                                                                                                                              >  2:159684/1‑149 (MQ=255)
           cTATTCAGGACCACCTGGGCTAAGTGCGCTTCGCGGTACTCGGAAGCGGCAGCCAAGGGAACGGCACGCTGATCGCCAGTGGTGACACGTTCATCCTGGTCGATTGCGGCTTTTCCCTGCGTGAAACCGAGCAGCGCCAGGCGCCGCTc                                                                                                                                              <  1:159684/149‑1 (MQ=255)
            tATTCAGGACCACCTGGGCTAAGTGCGCTTCGCGGTACTCGGAAGCGGCAGCCAAGGGAACGGCACGCTGATCGCCAGTGGTGACACGTTCATCCTGGTCGATTGCGGCTTTTCCCTGCGTGAAACCGAGCGGCGCCTGGCGCTGCTCgg                                                                                                                                            >  1:619926/1‑150 (MQ=255)
            tATTCAGGACCACCTGGGCTAAGTGCGCTTCGCGGTACTCGGAAGCGGCAGCCAAGGGAACGGCACGCTGATCGCCAGTGGTGACACGTTCATCCTGGTCGATTGCGGCTTTTCCCTGCGTGAAACCGAGCGGCGCCTGGCGCTGCTCgg                                                                                                                                            <  1:950510/150‑1 (MQ=255)
            tATTCAGGACCACCTGGGCTAAGTGCGCTTCGCGGTACTCGGAAGCGGCAGCCAAGGGAACGGCACGCTGATCGCCAGTGGTGACACGTTCATCCTGGTCGATTGCGGCTTTTCCCTGCGTGAAACCGAGCGGCGCCTGGCGCTGCTCgg                                                                                                                                            <  1:1339412/150‑1 (MQ=255)
             aTTCAGGACCCCCTCGGCTAAGTGCGCTTCGCGGTACTCGGAAGCGGCAGCACAGCGACAGGGTCACCGATCTTCAGTGATGACACGTTCATCCTGGTCGATTGCGGCTTTTCCCTGCGTGAAACCGAGCGGCGCCTGGCGCTGCTCggg                                                                                                                                           <  1:2350605/150‑1 (MQ=255)
             aTTCAGGACCACCTGGGCTAAGTGCGCTTCGCGGTACTCGGAAGCGGCAGCCAAGGGAACGGCACGCTGATCGCCAGTGGTGACACGTTCATCCTGGTCGATTGCGGCTTTTCCCTGCGTGAAACCGAGCGGCGCCTGGCGCTGCTCggg                                                                                                                                           <  2:619926/150‑1 (MQ=255)
             aTTCAGGACCACCTGGGCTAAGTGCGCTTCGCGGTACTCGGAAGCGGCAGCCAAGGGAACGGCACGCTGATCGCCAGTGGTGACACGTTCATCCTGGTCGATTGCGGCGTTTCCCTGCGTGAAACCGAGCGGCGCCTGGCGCTGCTCggg                                                                                                                                           <  2:1437733/150‑1 (MQ=255)
                 aGGACCACCTGGGCTAAGTGCGCTTCGCGGTACTCGGAAGCGGCAGCCAAGGGAACGGCACGCTGATCGCCAGTGGTGACACGTTCATCCTGGTCGATTGCGGCTTTTCCCTGCGTGAAACCGAGCGGCGCCTGGCGCTGCTCGGGGttt                                                                                                                                       <  2:1154368/150‑1 (MQ=255)
                  ggACCACCTGGGCTAAGTGCGCTTCGCGGTACTCGGAAGCGGACGACCAGGGAACGGTACGGTGATGGCCAGTTTTGTCACGTTCATCCTTGTCGATTGCGGCTTTTCCCTGCGTGAAACCGAGCGGCGCCTGGCGCTGCTCGGGGTTTc                                                                                                                                      <  2:1476771/150‑1 (MQ=255)
                   gACCACCTGGGCTAAGTGCGCTTCGCGGTACTCGGAAGCGGCAGCCAAGGGAACGGCACGCTGATCGCCAGTGGTGACACGTTCATCCTGGTCGATTGCGGCTTTTCCCTGCGTGAAACCGAGCGGCGCCTGGCGCTGCTCGGGGTTTCt                                                                                                                                     >  2:761717/1‑150 (MQ=255)
                    accaccTGGGCTAAGTGCGCTTCGCGGTACTCGGAAGCGGCAGCCAAGGGAACGGCACGCTGATCGCCAGTGGTGACACGTTCATCCTGGTCGATTGCGGCTTTTCCCTGCGTGAAACCGAGCGGCGCCTGGCGCTGCTCGGGGTTTCTg                                                                                                                                    <  1:1003755/150‑1 (MQ=255)
                         cTGGGCTAAGTGCGCTTCGCGGTACTCGGAAGCGGCAGCCAAGGGAACGGCACGCTGATCGCCAGTGGTGACACGTTCATCCTGGTCGATTGCGGCTTTTCCCTGCGTGAAACCGAGCGGCGCCTGGCGCTGCTCGGGGTTTCTGcagct                                                                                                                               >  1:30584/1‑150 (MQ=255)
                               tAAGTGCGCTTCGCGGTACTCGGAAGCGGCAGCCAAGGGAACGGCACGCTGATCGCCAGTGGTGACACGTTCATCCTGGTCGATTGCGGCTTTTCCCTGCGTGAAACCGAGCGGCGCCTGGCGCTGCTCggg                                                                                                                                           >  2:2026065/1‑132 (MQ=255)
                               tAAGTGCGCTTCGCGGTACTCGGAAGCGGCAGCCAAGGGAACGGCACGCTGATCGCCAGTGGTGACACGTTCATCCTGGTCGATTGCGGCTTTTCCCTGCGTGAAACCGAGCGGCGCCTGGCGCTGCTCggg                                                                                                                                           <  1:2026065/132‑1 (MQ=255)
                                  gTGCGCTTCGCGGTACTCGGAAGCGGCAGCCAAGGGAACGGCACGCTGATCGCCAGTGGTGACACGTTCATCCTGGTCGATTGCGGCTTTTCCCTGCGTGAAACCGAGCGGCGCCTGGCGCTGCTCGGGGTTTCTGCAGCTCAGCTcagt                                                                                                                      >  1:553010/1‑150 (MQ=255)
                                    gcgcTTCGCGGTACTCGGAAGCGGCAGCCAAGGGAACGGCACGCTGATCGCCAGTGGTGACACGTTCATCCTGGTCGATTGCGGCTTTTCCCTGCGTGAAACCGAGCAGCGCCAGGCgccgct                                                                                                                                               <  2:2124607/123‑1 (MQ=255)
                                    gcgcTTCGCGGTACTCGGAAGCGGCAGCCAAGGGAACGGCACGCTGATCGCCAGTGGTGACACGTTCATCCTGGTCGATTGCGGCTTTTCCCTGCGTGAAACCGAGCAGCGCCAGGCgccgct                                                                                                                                               >  1:2124607/1‑123 (MQ=255)
                                     cgcTTCGCGGTATTCGGAAGCGGCAGCCAAGGGAACGGCACGCTGATCGCCAGTGGTGACACGTTCATCCTGGTCGATTGCGGCTTTTCCCTGCGTGAAACCGAGCGGCGCCTGGCGCTGCTCGGGGTTTCTGCAGCTCAGCTcagtgca                                                                                                                   <  1:18534/150‑1 (MQ=255)
                                      gcTTCGCGGTACTCGGAAGCGGCAGCCAAGGGAACGGCACGCTGATCGCCAGTGGTGACACGTTCATCCTGGTCGATTGCGGCTTTTCCCTGCGTGAAACCGAGCGGCGCCTGGCGCTGCTCGGGGTTTCTGCAGCTCAGCTcagtgcag                                                                                                                  >  1:994515/1‑150 (MQ=255)
                                      gcTCCGCGGTACTCGGAAGCGGCAGCCAAGGGAACGGCACGCTGATACCTATGGGTGACACGTTCATCCTGGTCGATTGCGGCTTTTCCCTGCGTGAAACCGAGCGGCGCCTGGCGCTGCTCGGGGTTTCTGCAGCTCAGCTcagtgcag                                                                                                                  <  1:1352885/150‑1 (MQ=255)
                                       cTTCGCGGTACTCGGAAGCGGCAGCCAAGGGAACGGCACGCTGATCGCCAGTGGTGACACGTTCATCCTGGTCGATTGCGGCTTTTCCCTGCGTGAAACCGAGCGGCGCCTGGCGCTGCTCGGGGTTTCTGCAGCTCAGCTcagtgcagt                                                                                                                 >  2:1606523/1‑150 (MQ=255)
                                           gcgGTACTCGGAAGCGGCAGCCAAGGGAACGGCACGCTGATCGCCAGTGGTGACACGTTCATCCTGGTCGATTGCGGCTTTTCCCTGCGTGAAACCGAGCGGCGCCTGGCGCTGCTCGGGGTTTCTGCAGCTCAGCTCAGTGCAGTGCTg                                                                                                             <  1:364148/150‑1 (MQ=255)
                                           gcgGTACTCGGAAGCCGCAGCCAAGGGAACGGCACGCTGATCGCCAGTGGTGACACGTTCATCCTGGTCGATTTCGGCTTTTCCCTGCGTGAAACCGAGCGGCGCCTGGCGCTGCTCGGGGTTTCTGCAGCTCAGCTCAGTGCAGTGCTg                                                                                                             <  1:52026/150‑1 (MQ=255)
                                              agaCTCGGAAGCGGCAGCCAAGGGAACGGCACGCTGATCGCCAGTGGTGACACGTTCATCCTGGTCGATTGCGGCTTTTCCCTGCGTGAAACCGAGCGGCGCCTGGCGCTGCTCGGGGTTTCTGCAGCTCAGCTCAGTGCAGTGCTGGTc                                                                                                          >  2:1298533/3‑150 (MQ=255)
                                               tACTCGGAAGCGGCAGCCAAGGGAACGGCACGCTGATCGCCAGTGGTGACACGTTCATCCTGGTCGATTGCGGCTTTTCCCTGCGTGAAACCGAGCGGCGCCTGGCGCTGCTCGGGGTTTCTGCAGCTCAGCTCAGTGCAGTGCTGGTCa                                                                                                         >  1:131287/1‑150 (MQ=255)
                                                 cTCGGAAGCGGCAGCCAAGGGAACGGCACGCTGATCGCCAGTGGTGACACGTTCATCCTGGTCGATTGCGGCTTTTCCCTGCGTGAAACCGAGCGGCGCCTGGCGCTGCTCGGGGTTTCTGCAGCTCAGCTCAGTGCAGTGCTGGTCA‑cc                                                                                                      <  2:813225/150‑1 (MQ=255)
                                                         cGGCAGCCAAGGGAACGGCACGCTGATCGCCAGTGGTGACACGTTCATCCTGGTCGATTGCGGCTTTTCCCTGCGTGAAACCGAGCGGCGCCTGGCGCTGCTCGGGGTTTCTGCAGCTCAGCTCAGTGCAGTGCTGGTCA‑CCCACGAACa                                                                                              >  1:1599600/1‑150 (MQ=255)
                                                          ggCAGCCAAGGGAACGGCACGCTGATCGCCAGTGGTGACACGTTCATCCTGGTCGATTGCGGCTTTTCCCTGCGTGAAACCGAGCGGCGCCTGGCGCTGCTCGGGGTTTCTGCAGCTCAGCTCAGTGCAGTGCTGGTCA‑CCCACGAACAt                                                                                             >  1:1105166/1‑150 (MQ=255)
                                                           gCAGCCAAGGGAACGGCACGCTGATCGCCAGTGGTGACACGTTCATCCTGGTCGATTGCGGCTTTTCCCTGCGTGAAACCGAGCGGCGCCTGGCGCTGCTCGGGGTTTCTGcagctca                                                                                                                             >  2:1583957/1‑118 (MQ=255)
                                                           gCAGCCAAGGGAACGGCACGCTGATCGCCAGTGGTGACACGTTCATCCTGGTCGATTGCGGCTTTTCCCTGCGTGAAACCGAGCGGCGCCTGGCGCTGCTCGGGGTTTCTGcagctca                                                                                                                             <  1:1583957/118‑1 (MQ=255)
                                                              gCCAAGGGAACGGCACGCTGATCGCCAGTGGTGACACGTTCATCCTGGTCGATTGCGGCTTTTCCCTGCGTGAAACCGAGCGGCGCCTGGCGCTGCTCGGGGTTTCTGCAGCTCAGCTCAGTGCAGTGCTGGTCA‑CCCACGAACATGCCg                                                                                         >  2:1883345/1‑150 (MQ=255)
                                                               ccAAGGGAACGGCACGCTGATCGCCAGTGGTGACACGTTCATCCTGGTCGATTGCGGCTTTTCCCTGCGTGAAACCGAGCGGCGCCTGGCGCTGCTCGGGGTTTCTGCAGCTCAGCTcagtgca                                                                                                                   >  2:1273133/1‑124 (MQ=255)
                                                               ccAAGGGAACGGCACGCTGATCGCCAGTGGTGACACGTTCATCCTGGTCGATTGCGGCTTTTCCCTGCGTGAAACCGAGCGGCGCCTGGCGCTGCTCGGGGTTTCTGCAGCTCAGCTcagtgca                                                                                                                   <  1:1273133/124‑1 (MQ=255)
                                                                  aGGGAACGGCACGCTGATCGCCAGTGCTGACACGTTCATCCTGGTCGATTGCCGCTTTCACCTGCGTGAAACCGAGCGGCGCCTGGCGCTGCTCAGGGATCCTGCAGCCCAGCTCCGTTCAGTGCTGGTCA‑CCGCCGAACATTTCGAcaa                                                                                     >  2:198099/1‑148 (MQ=255)
                                                                         ggCACGCTGATCGCCAGTGGTGACACGTTCATCCTGGTCGATTGCGGCTTTTCCCTGCGTGAAACCGAGCGGCGCCTGGCGCTGCTCGGTGTTTCTGCAGCTCAGCTCAGTGCAGTGCTGGTCA‑CCCACGAACATGCCGACCACGTGCAt                                                                              <  1:992717/150‑1 (MQ=255)
                                                                         ggCACGCTGATCGCCAGTGGTGACACGTTCATCCTGGTCGATTGCGGCTTTTCCCTGCGTGAAACCGAGCGGCGCCTGGCGCTGCTCGGGGTTTCTGCAGCTCAGCTCAGTGCAGTGCTGGTCA‑CCCACGAACATGCCGACCACGTGCAt                                                                              >  2:2056828/1‑150 (MQ=255)
                                                                         ggCACGCTGATCGCCAGTGGTGACACGTTCATCCTGGTCGATTGCGGCTTTTCCCTGCGTGAAACCGAGCGGCGCCTGGCGCTGCTCGGGGTTTCTGCAGCTCAGCTCAGTGCAGTGCTGGTCA‑CCCACGAACATGCCGACCACGTGCAt                                                                              >  2:987433/1‑150 (MQ=255)
                                                                           aaCGCTGATCGCCAGTGGTGACACGTTCATCCTGGTCGATTGCGGCTTTTCCCTGCGTGAAACCGTATAAGGCCTGGCGCTGCTCGGGGTTTCTGCAGCTCAGCTCAGTGCAGTGCTGGTCA‑CCCACGAACATGCCGACCACGTGCATgg                                                                            <  1:761717/149‑1 (MQ=255)
                                                                            aCGCTGATCGCCAGTGGTGACACGTTCATCCTGGTCGATTGCGGCTTTTCCCTGCGTGAAACCGAGCGGCGCCTGGCGCTGCTCGGGGTTTCTGCAGCTCAGCTCAGTGCAGTGCTGGTCA‑CCCACGAACATGCCGACCACGTGCATggg                                                                           <  1:198099/150‑1 (MQ=255)
                                                                              gCTGATCGCCAGTGGTGACACGTTCATCCTGGTCGCTTGGGGGCTTTCGTTTGTTGAAACCGAGCGGCGCCGGGCGCTGCTCGGGGTTTCTGCAGCTCAGCTCAGTGCAGTGCTGGTCA‑CCCACGAACATGCCGACCACGTGCATGGGGt                                                                         >  1:1023482/1‑150 (MQ=255)
                                                                                tGATCGCCAGTGGTGACACGTTCATCCTGGTCGATTGCGGCTTTTCCCTGCGTGAAACCGAGCGGCGCCTGGCGCTGCTCGGGGTTTCTGCAGCTCAGCTCAGTGCAGTGCTGGTCA‑CCCACGAACATGCCGACCACGTGCATGGGGTCg                                                                       >  1:1466450/1‑150 (MQ=255)
                                                                                tGATCGCCAGTGGTGACACGTTCATCCTGGTCGATTGCGGCTTTTCCCTGCGTGAAACCGAGCGGCGCCTGGCGCTGCTCGGGGTTTCTGCAGCTCAGCTCAGTGCAGTGCTGGTCA‑CCCACGAACATGCCGACCACGTGCATGGGGTCg                                                                       >  2:1539640/1‑150 (MQ=255)
                                                                                  aTCGCCAGTGGTGACACGTTCATCCTGGTCGATTGCGGCTTTTCCCTGCGTGAAACCGAGCGGCGCCTGGCGCTGCTCGGGGTTTCTGCAGCTCAGCTCAGTGCAGTGCTGGTCA‑CCCACGAACATGCCGACCACGTGCATGGGGTCGGc                                                                     >  1:512322/1‑150 (MQ=255)
                                                                                   tCGCCAGTGGTGACACGTTCATCCTGGTCGATTGCGGCTTTTCCCTGCGTGAAACCGAGCGGCGCCTGGCGCTGCTCGGGGTTTCTGCAGCTCAGCTCAGTGCAGTGCTGGTCA‑CCCACGAACATGCCGACCACGTGCATGGGGTCGGCt                                                                    <  2:553010/150‑1 (MQ=255)
                                                                                     gCCAGTGGTGACACGTTCATCCTGGTCGATTGCGGCTTTTCCCTGCGTGAAACCGAGCGGCGCCTGGCGCTGCTCGGGGTTTCTGCAGCTCAGCTCAGTGCAGTGCTGGTCA‑CCCACGAACATGCCGACCACGTGCATGGGGTCGGCTTg                                                                  >  1:1605526/1‑150 (MQ=255)
                                                                                     gCCAGTGGTGACACGTTCATCCTGGTCGATTGCGGCTTTTCCCTGCGTGAAACCGAGCGGCGCCTGGCGCTGCTCGGGGTTTCTGCAGCTCAGCTCAGTGAAGTGCTGGTCA‑CCCACGAACATGCCGACCACGTGCATGGGGTCGGCTTg                                                                  >  1:2110091/1‑150 (MQ=255)
                                                                                      ccAGTGGTGACACGTTCATCCTGGTCGATTGCGGCTTTTCCCTGCGTGAAACCGAGCGGCGCCTGGCGCTGCTCGGGGTTTCTGCAGCTCAGCTCAGTGCAGTGCTGGTCA‑CCCACGaa                                                                                                <  1:1054246/119‑1 (MQ=255)
                                                                                      ccAGTGGTGACACGTTCATCCTGGTCGATTGCGGCTTTTCCCTGCGTGAAACCGAGCGGCGCCTGGCGCTGCTCGGGGTTTCTGCAGCTCAGCTCAGTGCAGTGCTGGTCA‑CCCACGaa                                                                                                >  2:1054246/1‑119 (MQ=255)
                                                                                          tggtgACACGTTCATCCTGGTCGATTGCGGCTTTTCCTTGCGTAAAACCGAGCGGCGCCTGGCGCTGCTCGGGGTTTCTGCAGCTCAGATCAGTGCAGTTCTGGTCA‑CCCACGAACAAGCCGACCCCATGCACGTGGTCGGCATgttcgt                                                             <  2:669753/150‑6 (MQ=255)
                                                                                                   gTTCATCCTGGTCGATTGCGGCTTTTCCCTGCGTGAAACCGAGCGGCGCCTGGCGCTGCTCGGGGTTTCTGCAGCTCAGCTCAGTGCAGTGCTGGTCA‑CCCACGAACATGCCGACCACGTGCATGGGGTCGGCTTGCTGTCACGGCGCTa                                                    >  1:330468/1‑150 (MQ=255)
                                                                                                    ttCATCCTGGTCGATTGCGGCTTTTCCCTGCGTGAAACCGAGCGGCGCCTGGCGCTGCTCGGGGTTTCTGCAGCTCAGCTCAGTGCAGTGCTGGTCA‑CCCACGAACATGCCGACCACGTGCATGGGGTCGGCTTGCTGTCACGGCGCTAc                                                   <  1:1883345/150‑1 (MQ=255)
                                                                                                       aTCCTGGTCGATTGCGGCTTTTCCCTGCGTGAAACCGAGCGGCGCCTGGCGCTGCTCGGGGTTTCTGCAGCTCAGCTCAGTGCAGTGCTGGTCA‑CCCACGAACATGCCGACCACGTGCATGGGGTCGGCTTGCTGTCACGGCGCTa                                                    >  2:1954679/1‑146 (MQ=255)
                                                                                                       aTCCTGGTCGATTGCGGCTTTTCCCTGCGTGAAACCGAGCGGAGCCTGGTGCTGCTCGGGGTTTCTGCAGCTCAGCTCAGTGCAGTGCTGGTCA‑CCCACGAACATGCCGACCACGTGCATGGGGTCGGCTTGCTGTCACGGCGCTa                                                    <  1:1954679/146‑1 (MQ=255)
                                                                                                        tCCTGGTCGATTGCGGCTTTTCCCTGCGTGAAACCGAGCGGCGCCTGGCGCTGCTCGGGGTTTCTGCAGCTCAGCTCAGTGCAGTGCTGGTCA‑CCCACGAACATGCCGACCACGTGCATGGGGTCGGCTTGCTGTCACGGCGCTACAATg                                               >  2:1639841/1‑150 (MQ=255)
                                                                                                          cTGGTCGATTGCGGCTTTTCCCTGCGTGAAACCGAGCGGCGCCTGGCGCTGCTCGGGGTTTCTGCAGCTCAGCTCAGTGCAGTGCTGGTCA‑CCCACGAACATGCCGACCACGTGCATGGGGTCGGCTTCCGTTCACGGGGCTTCAATGTa                                             <  2:1792498/150‑1 (MQ=255)
                                                                                                           tGGTCGATTGCGGCTTTTCCCTGCGTGAAACCGAGCGGCGCCTGGCGCTGCTCGGGGTTTCTGCAGCTCAGCTCAGTGCAGTGCTGGTCA‑CCCACGAACATGCCGACCACGTGCATGGGGTCGGCTTGCTGTCACGGCGCTACAATGTa                                             >  2:1688409/1‑149 (MQ=255)
                                                                                                           tGGTCGATTGCGGCTTTTCCCTGCGTGAAACCGAGCGGCGCCTGGCGCTGCTCGGGGTTTCTGCAGCTCAGCTCAGTGCAGTGCTGGTCA‑CCCACGAACATGCCGACCACGTGCATGGGGTCGGCTTGCTGTCACGGCGCTACAATGTa                                             >  2:1688702/1‑149 (MQ=255)
                                                                                                           tGGTCGATTGCGGCTTTTCCCTGCGTGAAACCGAGCGGCGCCTGGCGCTGCTCGGGGTTTCTGCAGCTCAGCTCAGTGCAGTGCTGGTCA‑CCCACGAACATGCCGACCACGTGCATGGGGTCGGCTTGCTGTCACGGCGCTACAATGTa                                             <  1:1688409/149‑1 (MQ=255)
                                                                                                           tGGTCGATTGCGGCTTTTCCCTGCGTGAAACCGAGCGGCGCCTGGCGCTGCTCGGGGTTTCTGCAGCTCAGCTCAGTGCAGTGCTGGTCA‑CCCACGAACATGCCGACCACGTGCATGGGGTCGGCTTGCTGTCACGGCGCTACAATGTa                                             <  1:1688702/149‑1 (MQ=255)
                                                                                                             gTCGATTGCGGCTTTTCCCTGCGTGAAACCGAGCGGCGCCTGGCGCTGCTCGGGGTTTCTGCAGCTCAGCTCAGTGCAGTGCTGGTCA‑CCCACGAACATGCCGACCACGTGCATGGGGTCGGCTTGCTGTCACGGCGCTACAATGTACCg                                          >  1:617311/1‑150 (MQ=255)
                                                                                                             gTCGATTGCGGCTTTTCCCTGCGTGAAACCGAGCGGCGCCTGGCGCTGCTCGGGGTTTCTGCAGCTCAGCTCAGTGCAGTGCTGGTCA‑CCCACGAACATGCCGACCACGTGCATGGGGTCGGCTTGCTGTCACGGCGCTACAATGTACCg                                          >  1:1417078/1‑150 (MQ=255)
                                                                                                              tCGATTGCGGCTTTTCCCTGCGTGAAACCGAGCGGCGCCTGGCGCTGCTCGGGGTTTCTGCAGCTCAGCTCAGTGCAGTGCTGGTCA‑CCCACGAACATGCCGACCACGTGCATGGGGTCGGCTTGCTGTCACGGCGCTACAATGTACCgg                                         <  1:1606523/150‑1 (MQ=255)
                                                                                                                gATTGCGGCTTTTCCCTGCGTGAAACCGAGCGGCGCCTGGCGCTGCTCGGGGTTTCTGCAGCTCAGCTCAGTGCAGTGCTGGTCA‑CCCACGAACATGCCGACCACGTGCATGGGGTCGGCTTGCTGTCACGGCGCTACAATGTACCGGTc                                       >  2:1702259/1‑150 (MQ=255)
                                                                                                                   tGCGGCTTTTCCCTGCGTGAAACCGAGCGGCGCCTGGCGCTGCTCGGGGTTTCTGCAGCTCAGCTCAGTGCAGTGCTGGTCA‑CCCACGAACATGCCGACCACGTGCATGGGGTCGGCTTGCTGTCACGGCGCTACAATGTACCGGTCTAc                                    <  2:617311/150‑1 (MQ=255)
                                                                                                                     cGGCTTTTCCCTGCGTGAAACCGAGCGGCGCCTGGCGCTGCTCGGGGTTTCTGCAGCTCAGCTcagtgc                                                                                                                    >  2:1381903/1‑69 (MQ=255)
                                                                                                                     cGGCTTTTCCCTGCGTGAAACCGAGCGGCGCCTGGCGCTGCTCGGGGTTTCTGCAGCTCAGCTcagtgc                                                                                                                    <  1:1381903/69‑1 (MQ=255)
                                                                                                                     cGGCTTTTCCCTGCGTGAAACCGAGCGGCGCCTGGCGCTGCTCGGGGTTTCTGCAGCTCAGCTCAGTGCAGTGCTGGTCA‑CCCACGAACATGcc                                                                                          <  2:2371974/94‑1 (MQ=255)
                                                                                                                     cGGCTTTTCCCTGCGTGAAACCGAGCGGCGCCTGGCGCTGCTCGGGGTTTCTGCAGCTCAGCTCAGTGCAGTGCTGGTCA‑CCCACGAACATGcc                                                                                          >  1:2371974/1‑94 (MQ=255)
                                                                                                                       gCTTTTCCCTGCGTGAAACCGAGCGGCGCCTGGCGCTTCTCGGGGTTTCTGCAGCTCAGCTCAGTGCAGTGCTGGTCA‑CCCACGAACATGCCGACCACGTGCATGGGGTCGGCTTGCTGTCACGGCGCTACAATGTACCGGTCTACCTCa                                >  1:1999449/1‑150 (MQ=255)
                                                                                                                       gCTTTTCCCTGCGTGAAACCGAGCGGCGCCTGGCGCTGCTCGGGGTTTCTGCAGCTCAGCTCAGTGCAGTGCTGGTCA‑CCCACGAACATGCCGACCACGTGCATGGGGTAGGATTGCTGTCATGGCGCAACCATTGAGCAGTCGACCTCa                                >  2:1123506/1‑150 (MQ=255)
                                                                                                                        cTTTTCCCTGCGTGAAACCGAGCGGCGCCTGGCGCTGCTCGGGGTTTCTGCAGCTCAGCTCAGTGCAGTGCTGGTCA‑CCCACGAACATGcc                                                                                          <  1:917273/91‑1 (MQ=255)
                                                                                                                        cTTTTCCCTGCGTGAAACCGAGCGGCGCCTGGCGCTGCTCGGGGTTTCTGCAGCTCAGCTCAGTGCAGTGCTGGTCA‑CCCACGAACATGcc                                                                                          >  2:709549/1‑91 (MQ=255)
                                                                                                                        cTTTTCCCTGCGTGAAACCGAGCGGCGCCTGGCGCTGCTCGGGGTTTCTGCAGCTCAGCTCAGTGCAGTGCTGGTCA‑CCCACGAACATGcc                                                                                          <  1:709549/91‑1 (MQ=255)
                                                                                                                        cTTTTCCCTGCGTGAAACCGAGCGGCGCCTGGCGCTGCTCGGGGTTTCTGCAGCTCAGCTCAGTGCAGTGCTGGTCA‑CCCACGAACATGcc                                                                                          >  2:917273/1‑91 (MQ=255)
                                                                                                                         ttttCCCTGCGTGAAACCGAGCGGCGCCTGGCGCTGCTCGGGGTTTCTGCAGCTCAGCTCAGTGCAGTGCTGGTCA‑CCCACGAACATGCCGACCACGTGCATGGGGTCGGCTTGCTGTCACGGCGCTACAATGTACCGGTCTACCTCAGc                              >  1:358370/1‑150 (MQ=255)
                                                                                                                              ccTGCGTGAAACCGAGCGGCGCCTGGCGCTGCTCGGGGTTTCTGCAGCTCAGCTCAGTGCAGTGCTGGTCA‑CCCACGAACATGCCGACCACGTGCATggg                                                                           >  1:562173/1‑100 (MQ=255)
                                                                                                                              ccTGCGTGAAACCGAGCGGCGCCTGGCGCTGCTCGGGGTTTCTGCAGCTCAGCTCAGTGCAGTGCTGGTCA‑CCCACGAACATGCCGACCACGTGCATggg                                                                           <  2:562173/100‑1 (MQ=255)
                                                                                                                               cTGCGTGAAACCGAGCGGCGCCTGGCGCTGCTCGGGGTTTCTGCAGCTCAGCTCAGTGCAGTGCTGGTCACCCCACGAACATGCCGACCACGTGCATGGGGTCGGCTTGCTGTCACGGCGCTACAATGTACCGGTCTACCTCAGCCAAgg                         >  1:1043548/1‑150 (MQ=255)
                                                                                                                               cTGCGTGAAACCGAGCGGCGCCTGGCGCTGCTCGGGGTTTCTGCAGCTCAGCTCAGTGCAGTGCTGGTCA‑CCCACGAACATGCCGACCACGTGCATGGGGTCGGCTTGCTGTCACGGCGCTACAATGTACCGGTCTACCTCAGCCAAggg                        >  1:788626/1‑150 (MQ=255)
                                                                                                                                tGCGTGAAACCGAGCGGCGCCTGGCGCTGCTCGGGGTTTCTGCAGCTCAGCTCAGTGCAGTGCTGGTCA‑CCCACGAACATGCCGACCACGTGCATGGGGTCGGCTTGCTGTCACGGCGCTACAATGTACCGGTCTACCTCAGCCAAGGGa                       <  1:987433/150‑1 (MQ=255)
                                                                                                                                    tGAAACCGAGCGGCGCCTGGCGCTGCTCGGGGTTTCTGCAGCTCAGCTCAGTGCAGTGCTGGTCA‑CCCACGAACATGCCGACCACGTGCATGGGGTCGGCTTGCTGTCACGgc                                                        >  1:1603770/1‑113 (MQ=255)
                                                                                                                                    tGAAACCGAGCGGCGCCTGGCGCTGCTCGGGGTTTCTGCAGCTCAGCTCAGTGCAGTGCTGGTCA‑CCCACGAACATGCCGACCACGTGCATGGGGTCGGCTTGCTGTCACGgc                                                        <  2:1603770/113‑1 (MQ=255)
                                                                                                                                       ccccGAGCAGCGCCAGGCGCCGCTCGGGGTTTCTGCAGCTCAGCTCAGTGCAGTGCTGGTCA‑CCCACGAACATGCCGACCACGTGCATGGGGTCGGCTTGCTGTCACGGCGCTACAATGTACCGGTCTACCTCAGCCAAGGGACTTTgcg                >  2:1202986/3‑150 (MQ=255)
                                                                                                                                        cccGAGCAGCGCCAGGCGCCGCTCGGGGTTTCTGCAGCTCAGCTCAGTGCAGTGCTGGTCA‑CCCACGAACATGCCGACCACGTGCATGGGGTCGGCtt                                                                   >  2:334002/2‑98 (MQ=39)
                                                                                                                                        cccGAGCAGCGCCAGGCGCCGCTCGGGGTTTCTGCAGCTCAGCTCAGTGCAGTGCTGGTCA‑CCCACGAACATGCCGACCACGTGCATGGGGTCGGCtt                                                                   <  1:334002/97‑1 (MQ=39)
                                                                                                                                        aCCGAGCGGCGCCTGGCGCTGCTCGGGGTTTCTGCAGCTCAGCTCAGTGCAGTGCTGGTCA‑CCCACGAACATGCCGACCACGTGCAt                                                                              <  2:1071464/87‑1 (MQ=255)
                                                                                                                                        aCCGAGCGGCGCCTGGCGCTGCTCGGGGTTTCTGCAGCTCAGCTCAGTGCAGTGCTGGTCA‑CCCACGAACATGCCGACCACGTGCAt                                                                              >  1:1071464/1‑87 (MQ=255)
                                                                                                                                        aCCGAGCGGCGCCTGGCGCTGCTCGGGGTTTCTGCAGCTCAGCTCAGTGCAGTGCTGGTCA‑CCCACGAACATGCCGACCACGTGCATgggg                                                                          <  2:169694/91‑1 (MQ=255)
                                                                                                                                        aCCGAGCGGCGCCTGGCGCTGCTCGGGGTTTCTGCAGCTCAGCTCAGTGCAGTGCTGGTCA‑CCCACGAACATGCCGACCACGTGCATgggg                                                                          >  1:169694/1‑91 (MQ=255)
                                                                                                                                          cGAGCGGCGCCTGGCGCTGCTCGGGGTTTCTGCAGCTCAGCTCAGTGCAGTGCTGGTCA‑CCCACGAACATGCCGACCACGTGCATGGGGTCGGCTTGCTGTCACGGCGCTACAATGTACCGGTCTACCTCAGCCAAGGGACTTTGCGCgg             >  1:742742/1‑150 (MQ=255)
                                                                                                                                          cGAGCAGCGCCAGGCGCCGCTCGGGGTTTCTGCAGCTCAGCTCAGTGCAGTGCTGGTCA‑CCCACGAACATGCCGa                                                                                        >  1:2090629/1‑75 (MQ=38)
                                                                                                                                          cGAGCAGCGCCAGGCGCCGCTCGGGGTTTCTGCAGCTCAGCTCAGTGCAGTGCTGGTCA‑CCCACGAACATGCCGa                                                                                        <  2:2090629/75‑1 (MQ=38)
                                                                                                                                           gAGCGGCGCCTGGCGCTGCTCGGGGTTTCTGCAGCTCAGCTCAGTGCAGTGCTGGTCA‑CCCACGAACATGCCGACCACGTGCATGGGGTCGGCTTGCTGTCACGGCGCTACAATGTACCGGTCTACCTCAGCCAAGGGACTTTGCGCGGc            >  2:58632/1‑150 (MQ=255)
                                                                                                                                             gcggcgCCTGGCGCTGCTCGGGGTTTCTGCAGCTCAGCTCAGTGCAGTGCTGGTCA‑CCCACGAACATGCCGACCACGTGCATGGGGTCGGCTTGCTGTCACGGCGCTACAATGTACCGGTCTACCTCAGCCAAGGGACTTTGCGCGGCAt          >  1:1392062/1‑150 (MQ=255)
                                                                                                                                                gcgcCTGGCGCTGCTCGGGGTTTCTGCAGCTCAGCTCAGTGCAGTGCTGGTCA‑CCCACGAACATGCCGACCACGTGCATGGGGTCgg                                                                      <  2:1694956/87‑1 (MQ=255)
                                                                                                                                                gcgcCTGGCGCTGCTCGGGGTTTCTGCAGCTCAGCTCAGTGCAGTGCTGGTCA‑CCCACGAACATGCCGACCACGTGCATGGGGTCGGCTTGCTGTCACGGCGCTACAATGTACCGGTCTACCTCAGCCAAGGGACTTTGCGCGGCATgcg       >  2:1896172/1‑150 (MQ=255)
                                                                                                                                                gcgcCAGGCGCCGCTCGGGGTTTCTGCAGCTCAGCTCAGTGCAGTGCTGGTCA‑CCCACGAACATGCCGACCACGTGCATGGGGTCGGCTTGCTGTCACGGCGCTACAATGTACCGGTCTACCTCAGCCAAGGGACTTTGCGCGGCATgcg       >  2:1101447/1‑150 (MQ=255)
                                                                                                                                                    cTGGCGCTGCTCGGGGTTTCTGCAGCTCAGCTCAGTGCAGTGCTGGTCA‑CCCACGAACATGCCGACCACGTGCATGGGGTCGGCTTGCTGTCACGGCGCTACAATGTACCGGTCTACCTCAGCCAAGGGACTTTGCGCGGCATGCGCAAg   >  1:1443016/1‑150 (MQ=255)
                                                                                                                                                     |                                                                                                                                                      
CGTGCTGAGCGCTATTCAGGACCACCTGGGCTAAGTGCGCTTCGCGGTACTCGGAAGCGGCAGCCAAGGGAACGGCACGCTGATCGCCAGTGGTGACACGTTCATCCTGGTCGATTGCGGCTTTTCCCTGCGTGAAACCGAGCGGCGCCTGGCGCTGCTCGGGGTTTCTGCAGCTCAGCTCAGTGCAGTGCTGGTCA‑CCCACGAACATGCCGACCACGTGCATGGGGTCGGCTTGCTGTCACGGCGCTACAATGTACCGGTCTACCTCAGCCAAGGGACTTTGCGCGGCATGCGCAAGC  >  NC_002947/1416725‑1417023

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑