| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,424,258 | A→C | 6.4% | E321A (GAG→GCG) ‡ | PP_5467 → | hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,424,258 | 0 | A | C | 6.4% | 285.3 / 6.1 | 94 | E321A (GAG→GCG) ‡ | PP_5467 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (44/44); new base C (2/4); total (46/48) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.78e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.49e-01 | |||||||||||
CTCAAGAGTGCCCTGAGCGCGATGCTGATTGGCGCGTACAGCCCGTACACCGGCCAGGCGGTGTTGGCTGAAGCGGTGAGCGGCTTTGCCCGCAAGGCCAAGGTCGAGAACTACTCGGTG‑AGCTACAGCGGCTTCAAATCGCTGAAAGAGGCTTTCAGCGAATACCAGCAGCAAGTCCCCAAGGCAAAGTTCGCAGCCTTCTGCCAGGAGGTTGGGCTGTCGTCGTGGAGCAGTGACTTTGGCGCCAAGGCCAAGAACCACAGCGACTCGGAATGCGCCATCGGGCAGAAGCTGGTC > NC_002947/1424110‑1424406 | cTCAAGAGTGCCCTGAGCGCGATGCTGATTGGCGCGTACAGCCCGTACACCGGCCAGGCGGTGTTGGCTGAAGCGGTGAGCGGCTTTGCCCGCAAGGCCAAGGTCGAGAACTACTCGGTG‑AGCTACAGCGGCTTCAAATCGCTGAAagag < 1:1970777/150‑1 (MQ=255) tCAAGAGTGCCCTGAGCGCGATGCTGATTGGCGCGTGCAGCCCGTACACCGGCCAGGCGGTGTTGGCTGAAGCGGTGAGCGGCTTTGCCCGCAAGGCCAAGGTCGAGAACTACTCGGTG‑CAGTTTAGCGGCTTCAAATCGCTGAAAGAgg > 1:1812697/1‑150 (MQ=255) tCAAGAGTGCCCTGAGCGCGATGCTGATTGGCGCGTACATCCCGTACACCGGCCAGGCGGTGTTGGCTGAAGCGGTGAGCGGCTTTGCCCGCAAGGCCAAGGTCGAGAACTACTCGGTG‑AGCTACAGCGGCTTCAAATCGCTGAAAGAgg > 1:1861711/1‑150 (MQ=255) aaGAGTGCCCTGAGCGCGATGCTGATTGGCGCGTACAGCCCGTACACCGGCCAGGCGGTGTTGGCTGAAGCGGTGAGCGGCTTTGCCCGCAAGGCCAAGGTCGAGAACTACTCGGTG‑AGCTACAGCGGCTTCAAATCGCTGAAAGAGGCt > 1:1693553/1‑150 (MQ=255) gCCCTGAGCGCGATGCTGATTGGCGCGTACAGCCCGTACACCGGCCAGGCGGTGTTGGCTGAAGCGGTGAGCGGCTTTGCCCGCAAGGCCAAGGTCGAGAACTACTCGGTG‑AGCTACAGCGGCTTCAAATCGCTGAAAGAGGCTTTCAGc < 2:1917981/150‑1 (MQ=255) ccTGAGCGCGATGCTGATTGGCGCGTACAGCCCGTACACCGGCCAGGCGGTGTTGGCTGAAGCGGTGAGCGGCTTTGCCCGCAAGGCCAAGTTCGAGAACTACTCGGTG‑AGCTACAGCGGCTTCAAATCGCTGAAAGCCTCTTTCAGCGa < 1:869102/150‑1 (MQ=255) cTGAGCGCGATGCTGATTGGCGCGTACAGCCCGTACACCGGCCAGGCGGTGTTGGCTGAAGCATTGAGGGGCTTTGCCCGAAAGGCCAAGGTCGAGAACTACTCGGTG‑AGCTACAGCGGCTTCAAATCGCTGAAAGAGGCTTTCAGCGaa < 1:893452/150‑1 (MQ=255) tGAGCGCGATGCTGATTGGCGCGTACAGCCCGTACACCGGCCAGGCGGTGTTGGCTGAAGCGGTGAGCGGCTTTGCCCGCAAGGCCAAGGTCGAGAACTACTCGGTG‑AGCTACAGCGGCTTCAAATCGCTGAAAGAGGCTTTCAGCGAAt > 1:12099/1‑150 (MQ=255) tGAGCGCGATGCTGATTGGCGCGTACAGCCCGTACACCGGCCAGGCGGTGTTGGCTGAAGCGGTGAGCGGCTTTGCCCGCAAGGCCAAGGTCGAGAACTACTCGGTG‑AGCTACAGCGGCTTCAAATCGCTGAAAGAGGCTTTCAGCGAAt > 2:259157/1‑150 (MQ=255) gcgATGCTGATTGGCGCGTACAGCCCGTACACCGGCCAGGCGGTGTTGGCTGAAGCGGTGAGCGGCTTTGCCCGCAAGGCCAAGGTCGAGAACTACTCGGTG‑AGCTACAGCGGCTTCAAATCGCTGAAAGAGGCTTTCAGCGAATACcag < 2:1226499/150‑1 (MQ=255) gcgATGCTGATTGGCGCGTACAGCCCGTACACCGGCCAGGCGGTGTTGGCTGAAGCGGTGAGCGGCTTTGCCCGCAAGGCCAAGGTCGAGAACTACTCGGTG‑AGCTACAGCGGCTTCAAATCGCTGAAAGAGGCTTTCAGCGAATACcag < 1:1183815/150‑1 (MQ=255) tgATTCTGATGGGCGCGTACAGCCCGTACACCGGCCAGGCGGTGTTGGCTGAAGCGGTGAGCGGCTTTGCCCGCAAGGCCAAGGTCGAGAACTACTCGGTG‑AGCTACAGCGGCTTCAAATCGCTGAAAGAGGCTTTCAGCGAATACcagc < 2:868704/149‑1 (MQ=255) cgATGCTGATTGGCGCGTACAGCCCGTACACCGGCCAGGCGGTGTTGGCTGAAGCGGTGAGCGGCTTTGCCCGCAAGGCCAAGGTCGAGAACTACTCGGTG‑AGCTACAGCGGCTTCAAATCGCTGAAAGAGGCTTTCAGCGAATACcagc < 1:91066/150‑1 (MQ=255) cgATGCTGATTGGCGCGTACAGCCCGTACACCGGCCAGGCGGTGTTGGCTGAAGCGGTGAGCGGCTTTGCCCGCAAGGCCAAGGTCGAGAACTACTCGGTG‑AGCTACAGCGGCTTCAAATCGCTGAAAGAGGCTTTCAGCGAATACcagc < 2:1224465/150‑1 (MQ=255) gATGCTGATTGGCGCGTACAGCCCGTACACCGGCCAGGCGGTGTTGGCTGAAGCGGTGAGCGGCTTTGCCCGCAAGGCCAAGGTCGAGAACTACTCGGTG‑AGCTACAGCGGCTTCAAATCGCTGAAAGAGGCTTTCAGCGAATACcagca < 2:2404436/150‑1 (MQ=255) tGATTGGCGCGTACAGCCCGTACACCGGCCAGGCGGTGTTGGCTGAAGCGGTGAGCGGCTTTGCCCGCAAGGCCAAGGTCGAGAACTACTCGGTG‑AGCTACAGCGGCTTCAAATCGCTGAAAGAGGCTTTCAGCGAATACcag > 2:850626/1‑143 (MQ=255) tGATTGGCGCGTACAGCCCGTACACCGGCCAGGCGGTGTTGGCTGAAGCGGTGAGCGGCTTTGCCCGCAAGGCCAAGGTCGAGAACTACTCGGTG‑AGCTACAGCGGCTTCAAATCGCTGAAAGAGGCTTTCAGCGAATACcag < 1:850626/143‑1 (MQ=255) tGATTGGCGCGTACAGCCCGTACACCGGCCAGGCGGTGTTGGCTGAAGCGGTGAGCGGCTTTGCCCGCAAGGCCAAGGTCGAGAACTACTCGGTG‑AGCTACAGCGGCTTCAAATCGCTGAAAGAGGCTTTCAGCGAATACca > 1:1475306/1‑142 (MQ=255) tGATTGGCGCGTACAGCCCGTACACCGGCCAGGCGGTGTTGGCTGAAGCGGTGAGCGGCTTTGCCCGCAAGGCCAAGGTCGAGAACTACTCGGTG‑AGCTACAGCGGCTTCAAATCGCTGAAAGAGGCTTTCAGCGAATACca < 2:1475306/142‑1 (MQ=255) gATTGGCGCGTACCGCCCGTACACCGGCCAGGCGGTGTTGGCTGAAGCGGTGAGCGGCTTTGCCCGCAAGGCCAAGGTCGAGAACTACTCGGTG‑AGCTACAGCGGCTTCAAATCGCTGAAAGAGGCttt > 2:2058182/1‑129 (MQ=255) gATTGGCGCGTACCGCCCGTACACCGGCCAGGCGGTGTTGGCTGAAGCGGTGAGCGGCTTTGCCCGCAAGGCCAAGGTCGAGAACTACTCGGTG‑AGCTACAGCGGCTTCAAATCGCTGAAAGAGGCttt < 1:2058182/129‑1 (MQ=255) aTTGGCGCGTACAGCCCGTACACCGGCCAGGCGGTGTTGGCTGAAGCGGTGAGCGGCTTTGCCCGCAAGGCCAAGGTCGAGAACTACTCGGTG‑AGCTACAGCGGCTTCAAATCGCTGAAAGAGGCTTTCAGCGAATACCAGCAGCAAGTc < 2:2166143/150‑1 (MQ=255) cgcgTACAGCCCGTACACCGGCCAGGCGGTGTTGGCTGAAGCGGTGAGCGGCTTTGCCCGCAAGGCCAAGGTCGAGAACTACTCGGTG‑AGCTACAGCGGCTTCAAATCGCTGAAAGAGGCTTTCAGCGAATACCAGCAGCAAGTCCCCaa < 1:970133/150‑1 (MQ=255) gcgTACAGCCCGTACACCGGCCAGGCGGTGTTGGCTGAAGCGGTGAGCGGCTTTGCCCGCAAGGCCAAGGTCGAGAACTACTCGGTG‑AGCTACAGCGGCTTCAAATCGCTGAAAGAGGCTTTCAGCGAATACCAGCAGCAAGTCCCCAAg < 1:1602418/150‑1 (MQ=255) cgTACAGCCCGTACACCGGCCAGGCGGTGTTGGCTGAAGCGGTGAGCGGCTTTGCCCGCAAGGCCAAGGTCGAGAACTACTCGGTG‑AGCTACAGCGGCTTCAAATCGCTGAAAGAGGCTTTCAGCGAATACCAGCAGCAAGTCCCCAAgg > 1:711419/1‑150 (MQ=255) cAGCCGGTACACCGGCCAGGCGGTGTTGGCTGAAGCGGTGAGCGGCTTTGCCCGCAAGGCCAAGGTCGAGAACTACTCGGTG‑AGCTACAGCGGCTTCAAATCGCTGAAAGAGGCTTTCAGCGAATACCAGCAGCAAGTCCCCAAGGCaaa < 2:551662/150‑1 (MQ=255) cccGTACACCGGCCAGGCGGTGTTGGCTGAAGCGGTGAGCGGCTTTGCCCGCAAGGCCAAGGTCGAGAACTACTCGGTG‑AGCTACAGCGGCTTCAAATCGCTGAAAGAGGCTTTCAGCGAATACCAGCAGCAAGTCCCCAAGGCAAAGtt > 1:690608/1‑150 (MQ=255) ccGTACACCGGCCAGGCGGTGTTGGCTGAAGCGGTGAGCGGCTTTGCCCGCAAGGCCAAGGTCGAGAACTACTCGGTG‑AGCTACAGCGGCTTCAAATCGCTGAAAGAGGCTTTCAGCGAATACCAGCAGCAAGTCCCCAAGGCAAAGTTc > 2:1567158/1‑150 (MQ=255) acCGGCCAGGCGGTGTTGGCTGAAGCGGTGAGCGGCTTTGCCCGCAAGGCCAAGGTCGAGAACTACTCGGTG‑AGCTACAGCGGCTTCAAATCGCTGAAAGAGGCTTTCAGCGAATACCAGCAGCAAGTCCCCAAGGCAAAGTTCGCAGcc > 1:1029518/1‑150 (MQ=255) ccGGCCAGGCGGTGTTGGCTGAAGCGGTGAGCGGCTTTGCCCGCAAGGCCAAGGTCGAGAACTACTCGGTG‑AGCTACAGCGGCTTCAAATCGCTGAAAGCCTCTTTCAGCGa > 2:1331062/1‑112 (MQ=255) acGGCCAGGCGGTGTTGGCTGAAGCGGTGAGCGGCTTTGCCCGCAAGGCCAAGGTCGAGAACTACTCGGTG‑AGCTACAGCGGCTTCAAATCGCTGAAAGCCTCTTTCAGCGa < 1:1331062/111‑1 (MQ=255) cGGCCAGGCGGTGTTGGCTGAAGCGGTGAGCGGCTTTGCCCGCAAGGCCAAGGTCGAGAACTACTCGGTG‑AGCTACAGCGGCTTCAAATCGCTGAAAGAGGCTTTCAGCGAATACCAGCAGCAAGTCCCCAAGGCAAAGTTCGCAGCCtt > 1:945839/1‑150 (MQ=255) gCCCGGCGGTGTTGGTTGAAGCGGGGAGCGGCGTTGCCCGCAAGGAAACGGTCGAATGCT‑CGTGGTGTATCTACAGCGGCTTCAAATCGCTGAAAGAGGCTTTCAGCGAATACCAGCAGCAAGTCCCCAAGGCAAAGTTCGCAGCCTTCt < 1:2090182/150‑1 (MQ=255) ccAGGCGGTGTTGGCTGAAGCGGTGAGCGGCTTTGCCCGCAAGGCCAAGGTCGAGAACTACTCGGTG‑AGCTACAGCGGCTTCAAATCGCTGAAAGAGGCTTTCAGCGAATACCAGCAGCAAGTCCCCAAGGCAAAGTTCGCAGCCTTCTg > 2:1500697/1‑150 (MQ=255) ggCGGTGTTGGCTGAAGCGGTGAGCGGCTTTGCCCGCAAGGCCAAGGTCGAGAACTACTCGGTG‑AGCTACAGCGGCTTCAAATCGCTGAAAGAGGCTTTCAGCGAATACCAGCAGCAAGTCCCCAAGGCAAAGTTCGCAGCCTTCTGCCa > 1:2329008/1‑150 (MQ=255) gCGGTGTTGGCTGAAGCGGTGAGCGGCTTTGCCCGCAAGGCCAAGGTCGAGAACTACTCGGTG‑AGCTACAGCGGCTTCAAATCGCTGAAAGCCTCTTTCAGc < 1:908318/102‑1 (MQ=255) cGGTGTTGGCTGAAGCGGTGAGCGGCTTTGCCCGCAAGGCCAAGGTCGAGAACTACTCGGTG‑AGCTACAGCGGCTTCAAATCGCTGAAAGAGGCTTTCAGCGAATACCAGCAGCAAGTCCCCAAGGCAAAGTTCGCAGCCTTCTGCCagg < 1:259157/150‑1 (MQ=255) tgtTGGCTGAAGCGGTGAGCGGCTTTGCCCGCAAGGCCAAGGTCGAGAACTACTCGGTG‑AGCTACAGCGGCTTCAAATCGCTGAAAGAGGCTTTCAGCGAATACCAGCAGCAAGTCCCCAAGGCAAAGTTCGCAGCCTTCTGCCaggagg > 2:2203353/1‑150 (MQ=255) ttGGCTGAAGCGGTGAGCGGCTTTGCCCGCAAGGCCAAGGTCGAGAACTACTCGGTG‑AGCTACAGCGGCTTCAAATCGCTGAAAGAGGCTTTCAGCGAATACCAGCAGCAAGTCCCCAAGGCAAAGTTCGCAGCCTTCTGCCAGGAGGtt < 2:690608/150‑1 (MQ=255) ttGGCTGAAGCGGTGAGCGGCTTTGCCCGCAAGGCCAAGGTCGAGAACTACTCGGTG‑AGCTACAGCGGCTTCAAATCGCTGAAAGAGGCTTTCAGCGAATACCAGCAGCAAGTCCCCAAGGCAAAGTTCGCAGCCTTCTGCCAGGAGGtt < 1:73430/150‑1 (MQ=255) gCTGAAGCGGTGAGCGGCTTTGCCCGCAAGGCCAAGGTCGAGAACTACTCGGTG‑AGCTACAGCGGCTTCAAATCGCTGAAAGAGGCttt < 2:138221/89‑1 (MQ=255) gCTGAAGCGGTGAGCGGCTTTGCCCGCAAGGCCAAGGTCGAGAACTACTCGGTG‑AGCTACAGCGGCTTCAAATCGCTGAAAGAGGCttt > 1:138221/1‑89 (MQ=255) gCTGAAGCGGTGAGCGGCTTTGCCCGCAAGGCCAAGGTCGAGAACTACTCGGTG‑AGCTACAGCGGCTTCAAATCGCTGAAAGAGGCTTTCAGCGAATACCAGCAGCAAGTCCCCAAGGCAAAGTTCGCAGACTTCTGCCAGGAGGTTggg > 2:1869810/1‑150 (MQ=255) tGAAGCGGTGAGCGGCTTTGCCCGCAAGGCCAAGGTCGAGAACTACTCGGTG‑AGCTACAGCGGCTTCAAATCGCTGAAAGAGGCTTTCAGCGAATACCAGCAGCAAGTCCCCAAGGCAAAGTTCGCAGCCTTCTGCCAGGAGGTTGGGCt > 1:73524/1‑150 (MQ=255) gAAGCGGTGAGCGGCTTTGCCCGCAAGGCCAAGGTCGAGAACTACTCGGTG‑AGCTACAGCGGCTTCAAATCGCTGAAAGAGGCTTTCAGCGAATACCAGCAGCAAGTCCCCaa < 2:2174501/113‑1 (MQ=255) gAAGCGGTGAGCGGCTTTGCCCGCAAGGCCAAGGTCGAGAACTACTCGGTG‑AGCTACAGCGGCTTCAAATCGCTGAAAGAGGCTTTCAGCGAATACCAGCAGCAAGTCCCCaa > 1:2174501/1‑113 (MQ=255) tGAGCGGCTTTGCCCGCAAGGCCAAGGTCGAGAACTACTCGGTG‑AGCTACAGCGGCTTCAAATCGCTGAAAGAGGCTTTCAGCGAATACcagca > 2:2186365/1‑94 (MQ=255) tGAGCGGCTTTGCCCGCAAGGCCAAGGTCGAGAACTACTCGGTG‑AGCTACAGCGGCTTCAAATCGCTGAAAGAGGCTTTCAGCGAATACcagca < 1:2186365/94‑1 (MQ=255) tGAGCGGCTTTGCCCGCAAGGCCAAGGTCGAGAACTACTCGGTG‑AGCTACAGCGGCTTCAAATCGCTGAAAGAGGCTTTCAGCGAATACCAGCAGCAAGTCCCCAAGGCAAAGTTCGCAGCCTTCTGCCAGGAGGTTGGGCTGTcgtcgt < 1:1415652/150‑1 (MQ=255) gAGCGGCTTTGCCCGCAAGGCCAAGGTCGAGAACTACTCGGTG‑AGCTACAGCGGCTTCAAATCGCTGAAAGAGGCTTTCAGCGAATACCAGCAGCAAGTCCCCAAGGCAAAGTTCGCAGCCTTCTGCCAGGAGGTTGGGCTGTCGTCGTg > 2:266516/1‑150 (MQ=255) gAGCGGCTTTGCCCGCAAGGCCAAGGTCGAGAACTACTCGGTG‑AGCTACAGCGGCTTCAAATCGCTGAAAGAGGCTTGCAGCGAATACCAGCAGCAAGTCCCCAAGGCAAAGTTCGCAGCATTCTGCCAGGAGGTTGGGCTGTCGTCGTg < 1:194063/150‑1 (MQ=255) aGCGGCTTTGCCCGCAAGGCCAAGGTCGAGAACTACTCGGTG‑AGCTACAGCGGCTTCAAATCGCTGAAAGAGGCTTTCAGCGAATACCAGCAGCAAGTCCCCAAGGCAAAGTTCGCAGCCTTCTGCCAGGAGGTTGGGCTGTCGTCGTgg > 1:853474/1‑150 (MQ=255) aGCGGCTTTGCCCGCAAGGCCAAGGTCGAGAACTACTCGGTG‑AGCTACAGCGGCTTCAAATCGCTGAAAGAGGCTTTCAGCGAATACCAGCAGCAAGTCCCCAAGGCAAAGTTCGCAGCCTTCTGCCAGGAGGTTGGGCTGTCGTCGTgg < 1:374177/150‑1 (MQ=255) gCGGCTTTGCCCGCAAGGCCAAGGTCGAGAACTACTCGGTG‑AGCTACAGCGGCTTCAAATCGCTGAAAGAGGCTTTCAGCGAATACCAGCAGCAAGTCCCCAAGGCAAAGTTCGCAGCCTTCTGCCAGGAGGTTGGGCTGTCGTCGTGGa < 1:1940670/150‑1 (MQ=255) cGGCTTTGCCCGCAAGGCCAAGGTCGAGAACTACTCGGTG‑AGCTACAGCGGCTTCAAATCGCTGAAAGAGGCTTTCAGCGAATACCAGCAGCAAGTCCCCAAGGCAAAGTTCGCAGCCTTCTGCCAGGAGGTTGGGCTGTcgtcgt > 1:1796255/1‑146 (MQ=255) cGGCTTTGCCCGCAAGGCCAAGGTCGAGAACTACTCGGTG‑AGCTACAGCGGCTTCAAATCGCTGAAAGAGGCTTTCAGCGAATACCAGCAGCAAGTCCCCAAGGCAAAGTTCGCAGCCTTCTGCCAGGAGGTTGGGCTGTcgtcgt < 2:1796255/146‑1 (MQ=255) ggCTTTGCCCGCAAGGCCAAGGTCGAGAACTACTCGGTG‑AGCTACAGCGGCTTCAAATCGCTGAAAGAGGCTTTCAGCGAATACCAGCAGCAAGTCCCCAAGGCAAAGTTCGCAGGCTTCTGCCAGGAGTTTGGACTGTCGTCGTGGAGc > 2:633568/1‑150 (MQ=255) gCTTTGCCCGCAAGGCCAAGGTCGAGAACTACTCGGTG‑AGCTACAGCGGCTTCAAATCGCTGAAAGAGGCTTTCAGCGAATACCAGCAGCAAGTCCCCAAGGCAAAGTTCGCAGCCTTCTGCCAGGAGGTTGGGCTGTCGTCGTGGAGCa > 1:1203690/1‑150 (MQ=255) cccGCAAGGCCAAGGTCGAGAACTACTCGGTG‑AGCTACAGCGGCTTCAAATCGCTGAAAGAGGCTTTCAGCGAATACCAGCAGCAAGTCCCCAAGGCAAAGTTCGCAGCCTTCTGCCAGGAGGTTGGGCTGTcgtcgt < 2:1600115/138‑1 (MQ=255) cccGCAAGGCCAAGGTCGAGAACTACTCGGTG‑AGCTACAGCGGCTTCAAATCGCTGAAAGAGGCTTTCAGCGAATACCAGCAGCAAGTCCCCAAGGCAAAGTTCGCAGCCTTCTGCCAGGAGGTTGGGCTGTcgtcgt > 1:1600115/1‑138 (MQ=255) ccGCAAGGCCAAGGTCGAGAACTACTCGGTG‑AGCTACAGCGGCTTCAAATCGCTGAAAGAGGCTTTCAGCGAATACCAGCAGCAAGTCCCCaa > 2:873641/1‑93 (MQ=255) ccGCAAGGCCAAGGTCGAGAACTACTCGGTG‑AGCTACAGCGGCTTCAAATCGCTGAAAGAGGCTTTCAGCGAATACCAGCAGCAAGTCCCCaa < 1:873641/93‑1 (MQ=255) aaGGTCGAGAACTACTCGGTG‑AGCTACAGCGGCTTCCCATCGCTGAAAGAGGCTTTCAGCGAATACCAGCAGCAAGTCCCCAAGGCAAAGTTCGCAGCCTTCTGCCAGGAGGTTGGGCTGTCGTCGTGGAGCAGTGACTTTGGCgccaag < 1:633568/150‑1 (MQ=255) aaGGTCGAGAACTACTCGGTG‑AGCTACAGCGGCTTCAAATCGCTGAAAGAGGCTTTCAGCGAATACCAGCAGCAAGTCCCCAAGGCAAAGTTCGCa > 1:2136513/1‑96 (MQ=255) aaGGTCGAGAACTACTCGGTG‑AGCTACAGCGGCTTCAAATCGCTGAAAGAGGCTTTCAGCGAATACCAGCAGCAAGTCCCCAAGGCAAAGTTCGCa < 2:2136513/96‑1 (MQ=255) gTCGAGAACTACTCGGTG‑AGCTACAGCGGCTTCAAATCGCTGAAAGAGGCTTTCAGCGAATACCAGCAGCAAGTCCCCAAGGCAAAGTTCGCAGCCTTCt < 1:1767918/100‑1 (MQ=255) gTCGAGAACTACTCGGTG‑AGCTACAGCGGCTTCAAATCGCTGAAAGAGGCTTTCAGCGAATACCAGCAGCAAGTCCCCAAGGCAAAGTTCGCAGCCTTCt > 2:1767918/1‑100 (MQ=255) tCGAGAACTGCTCGGTG‑AGCTACAGCGGCTTCAAATCGCTGAAAGAGGCTTTCAGCGAATACCAGCAGCAAGTCCCCAAGGCAAAGTTCGCAGCCTTCTGCCAGGAGGTTGGGCTGTCGTCGTGGAGCAGTGACTTTGGCgccaaggcca > 2:590182/1‑150 (MQ=255) gagaACTACTCGGTG‑AGCTACAGCGGCTTCAAATCGCTGAAAGAGGCTTTCAGCGAATACCAGCAGCAAGTCCCCAAGGCAAAGTTCGCAGCCTTCTGCCAGGAGGTTGGGCTGTCGTCGTGGAGCAGTGACTTTGGCgccaaggccaag > 1:1146518/1‑150 (MQ=255) actCGGTG‑AGCTACAGCGGCTTCAAATCGCTGAAAGAGGCTTTCAGCGAATACCAGCAGCAAGTCCCCAAGGCAAAGTTCGCAGCCTTCTGCCAGGAGGTTGGGCTGTCGTCGTGGAGCAGTGACTTTGGCGCCAAGGCCAAGAACcaca > 1:681619/1‑150 (MQ=255) tCGGTG‑AGCTACAGCGGCTTCAAATCGCTGAAAGAGGCTTTCAGCGAATACcagca < 1:2056445/56‑1 (MQ=255) tCGGTG‑AGCTACAGCGGCTTCAAATCGCTGAAAGAGGCTTTCAGCGAATACcagca > 2:2056445/1‑56 (MQ=255) ggTG‑AGCTACAGCGGCTTCAAATCGCTGAAAGAGGCTTTCAGCGAATACCCGCAGCAAGTCCCCAAGGCAAAGTTCGCAGCCTTCTGCCAGGAGGTTGGGCTGTCGTCGTGGAGCAGTGACTTTGGCGCCAAGGCCAAGAACCACAGCGa > 2:592299/1‑150 (MQ=255) ggTG‑AGCTACAGCGGCTTCAAATCGCTGAAAGAGGCTTTCAGCGAATACCAGCAGCAAGTCCCCAAGGCaaa > 1:149106/1‑72 (MQ=255) ggTG‑AGCTACAGCGGCTTCAAATCGCTGAAAGAGGCTTTCAGCGAATACCAGCAGCAAGTCCCCAAGGCaaa < 2:149106/72‑1 (MQ=255) tG‑AGCTACAGCGGCTTCAAATCGCTGAAAGAGGCTTTCAGCGAATACCAGCAGCAAGTCCCCAAGGCAAAGTTCGCAGCCTTCTGCCAGGAGGTTGGGCTGTCGTCGTGGAGCAGTGACTTTGGCGCCAAGGCCAAGAACCACAGCGACt > 2:1626862/1‑150 (MQ=255) cTACAGCGGCTTCAAATCGCTGAAAGAGGCTTTCAGCGAATACCAGCAGCAAGTCCCCAAGGCAAAGTTCGCAGCCTTCTGCCAGGAGGTTGGGCTGTCGTCGTg > 1:1577854/1‑105 (MQ=255) cTACAGCGGCTTCAAATCGCTGAAAGAGGCTTTCAGCGAATACCAGCAGCAAGTCCCCAAGGCAAAGTTCGCAGCCTTCTGCCAGGAGGTTGGGCTGTCGTCGTg < 2:1577854/105‑1 (MQ=255) ggCTTCAAATCGCTGAAAGAGGCTTTCAGCGAATACCAGCAGCAAGTCCCCTAGGCAAAGTTCGCAGCCTTCTGCCAGGAGGTTGGGCTGTCGTCGTGGAGCAGTGACTTTGGCGCCAAGGCCAAGAGCCGCAGCGACTCGGAATGCGcc < 2:1234019/150‑1 (MQ=255) gCTTCAAATCGCTGAAAGAGGCTTTCAGCGAATACCAGCAGCAAGTCCCCAAGGCAAAGTTCGCAGc > 2:1587570/1‑67 (MQ=255) gCTTCAAATCGCTGAAAGAGGCTTTCAGCGAATACCAGCAGCAAGTCCCCAAGGCAAAGTTCGCAGc < 1:1587570/67‑1 (MQ=255) ttCAAATCGCTGAAAGAGGCTTTCAGCGAATACCAGCAGCAAGTCCCCAAGGCAAAGTTCGCAGCCTTCTGCCAGGAGGTTGGGCTGTCGTCGTGGAGCAGt > 1:1909620/1‑102 (MQ=255) ttCAAATCGCTGAAAGAGGCTTTCAGCGAATACCAGCAGCAAGTCCCCAAGGCAAAGTTCGCAGCCTTCTGCCAGGAGGTTGGGCTGTCGTCGTGGAGCAGt < 2:1909620/102‑1 (MQ=255) ttCAAATCGCTGAAAGAGGCTTTCAGCGAATACCAGCAGCAAGTCCCCAAGGCAAAGTTCGCAGCCTTCTGCCAGGAGGTTGGGCTGTCGTCGTGGAGCAGTGACTTTGGCGCCAAGGCCAAGAACCACAGCGACTCGGAATGCGCCATc > 1:1611750/1‑150 (MQ=255) tggtattCGCTGAAAGCCTCTTTCAGCGAATACCAGCAGCAAGTCCCCAAGGCAAAGTTCGCAGCCTTCTGCCAGGAGGTTGGGCTGTCGTCGTGGAGCAGTGACTTTGGCGCCAAGGCCAAGAACCACAGCGACTCGGAATGCGCCATc > 2:2395773/7‑150 (MQ=255) tCAAATCGCTGAAAGAGGCTTTCAGCGAATACCAGCAGCAAGTCCCCAAGGCAAAGTTCGCAGCCTTCTGCCAGGAGGTTGGGCTGTCGTCGTGGAGCAGTGACTTTGGCGCCAAGGCCAAGAACCACAGCGACTCGGAATGCGCCATCg < 1:2304610/150‑1 (MQ=255) aTCGCTGAAAGAGGCTTTCAGCGAATACCAGCAGCAAGTCCCCAAGGCAAAGTTCGCAGCCTTCTGCCAGGAGGTTGGGCTGTCGTCGTGGAGCAGTGACTTTGGCGCCAAGGCCAAGAACCACAGCGACTCGGAATGCGCCATCGGGCa < 1:2203353/150‑1 (MQ=255) tCGCTGAAAGAGGCTTTCAGCGAATACCAGCAGCAAGTCCCCAAGGCAAAGTTCGCAGCCTTCTGCCAGGAGGTTGGGCTGTCGTCGTGGAGTGGTTACTTTGGCGCCAAGGCCAAGAACCACAGCGACTCGGAATGCGCCATCGGGCAg < 1:1500697/150‑1 (MQ=255) gCTGAAAGCCTCTTTCAGCGAATACCAGCAGCAAGTCCCCAAGGCAAAGTTCGCAGCCTTCTGCCAGGAGGTTGGGCTGTCGTCGTGGAGCAGTGACTTTGGCGCCAAGGCCAAGAACCACAGCGACTCGGAATGCGCCATCg < 1:1670458/143‑1 (MQ=255) tGAAAGAGGCTTTCAGCGAATACCAGCAGCAAGTCCCCAAGGCAAAGTTCGCAGCCTTCTGCCAGGAGGTTGGGCTGTCGTCGTGGAGCAGTGACTTTGGCGCCAAGGCCAAGAACCACAGCGACTCGGAATGCGCCATCGGGCAGAAGc < 1:592299/150‑1 (MQ=255) gAAAGAGGCTTTCAGCGAATACCAGCAGCAAGTCCCCAAGGCAAAGTTCGCAGCCTTCTGCCAGGAGGTTGGGCTGTCGTCGTGGAGCAGTGACTTTGGCGCCAAGGCCAAGAACCACAGCGACTCGGAATGCGCCATCGGGCAGAAGCt < 2:853474/150‑1 (MQ=255) aaaGAGGCTTTCAGCGAATACCAGCAGCAAGTCCCCAAGGCAAAGTTCGCCGACTTCTGCCAGGAGGTTGGGCTGTCGTCGTGGAGCAGTGACTTTGGCGCCAAGGCCAAGAACCACAGCGACTCGGAATGCGCCATCGGGCAGAAGCTg > 2:2392495/1‑150 (MQ=255) aaaGAGGCTTTCAGCGAATACCAGCAGCAAGTCCCCAAGGCAAAGTTCGCAGCCTTCTGCCAGGAGGTTGGGCTGTCGTCGTGGAGCAGTGACTTTGGCGCCAAGGCCAAGAACCACAGCGACTCGGaa < 1:698417/129‑1 (MQ=255) aaaGAGGCTTTCAGCGAATACCAGCAGCAAGTCCCCAAGGCAAAGTTCGCAGCCTTCTGCCAGGAGGTTGGGCTGTCGTCGTGGAGCAGTGACTTTGGCGCCAAGGCCAAGAACCACAGCGACTCGGaa > 2:698417/1‑129 (MQ=255) aaaGAAGCTTTTAGCAAATAGCAGCAGCAAGTCCCCAAGGCAAAGTTCGCAGCCTTCTGCCAGCAGGTTGGGCTGTCGACGTGGAGCAGTTACTTTGGCGCAAAGGCCTAGAACCACAGCGACTCGGAATACGCCATCAGGCaataactg > 2:457445/1‑143 (MQ=255) agagGCTTTCAGCGAATACCAGCAGCAAGTCCCCAAGGCAAAGTTCGCAGCCTTCTGCCAGGAGGTTGGGCTGTCGTCGTGGAGCAGTGACTTTGGCGCCAAGGCCAAGAACCACAGCGACTCGGAATGCGCCATCGGGCAGAAGCTGGt < 1:1567158/150‑1 (MQ=255) agagGCTTTCAGCGAATACCAGCAGCAAGTCCCCAAGGCAAAGTTCGCAGCCTTCTGCCAGGAGGTTGGGCTGTCGTCGTGGAGCAGTGACTTTGGCGCCAAGGCCAAGAACCACAGCGACTCGGAATGCGCCATCGGGCAGAAGCTGGt < 2:1693553/150‑1 (MQ=255) gagGCTTTCAGCGAATACCAGCAGCAAGTCCCCAAGGCAAAGTTCGCAGCCTTCTGCCAGGAGGTTGGGCTGTCGTCGTGGAGCAGTGACTTTGGCGCCAAGGCCAAGAACCACAGCGACTCGGAATGCGCCATCGGGCAGAAGCTGGTc < 1:590182/150‑1 (MQ=255) agGCTTTCAGCGAATACCAGCAGCAAGTCCCCAAGGCAAAGTTCGCAGCCTTCTGCCAGGAGGTTGGGCTGTCGTCGTGGAGCAGTGACTTTGGCGCCAAGGCCAAGAACCACAGCGACTCGGAATgc > 1:1372957/1‑128 (MQ=255) agGCTTTCAGCGAATACCAGCAGCAAGTCCCCAAGGCAAAGTTCGCAGCCTTCTGCCAGGAGGTTGGGCTGTCGTCGTGGAGCAGTGACTTTGGCGCCAAGGCCAAGAACCACAGCGACTCGGAATgc < 2:1372957/128‑1 (MQ=255) | CTCAAGAGTGCCCTGAGCGCGATGCTGATTGGCGCGTACAGCCCGTACACCGGCCAGGCGGTGTTGGCTGAAGCGGTGAGCGGCTTTGCCCGCAAGGCCAAGGTCGAGAACTACTCGGTG‑AGCTACAGCGGCTTCAAATCGCTGAAAGAGGCTTTCAGCGAATACCAGCAGCAAGTCCCCAAGGCAAAGTTCGCAGCCTTCTGCCAGGAGGTTGGGCTGTCGTCGTGGAGCAGTGACTTTGGCGCCAAGGCCAAGAACCACAGCGACTCGGAATGCGCCATCGGGCAGAAGCTGGTC > NC_002947/1424110‑1424406 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |