| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,435,225 | A→T | 6.2% | L249Q (CTG→CAG) | PP_1256 ← | alpha‑ketoglutarate semialdehyde dehydrogenase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,435,225 | 0 | A | T | 6.2% | 297.9 / 8.1 | 96 | L249Q (CTG→CAG) | PP_1256 | alpha‑ketoglutarate semialdehyde dehydrogenase |
| Reads supporting (aligned to +/- strand): ref base A (50/40); new base T (3/3); total (53/43) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.91e-01 | |||||||||||
CGGCGCCCTGGGTCAGCGAGGCGACGAAACCTTGTGCCAGTGCTTCGGCACGGGCTTGCAGGGCGGCGTCGAACAGGAACACCGGGTTGATCGAACTCATTTCGGCATACACCGGGATGGGCTCCGGGCGCGCCTGGGCGGCTTGGCACAGTGCCATGCCACCGCTGCGCGAGCCGGTGAAACCAACGGCCTTGATACGTGGGT‑CGCTGACCAGAGCAATGCCCACTTCGCGGCCGGAGCCATAAAGCAGCGAGAACACACCCTCCGGTAAGCCGCACTGCTTCACTGCTTGC > NC_002947/1435076‑1435368 | cGGCGCCCTGGGTCAGCGAGGCGACGAAACCTTGTGCCAGTGCTTCGGCACGGGCTTGCAGGGCGGCGTCGAACAGGAACACCGGGTTGATCGAACTCATTTCGGCATACACCGGGATGGGCTCCGGGCGCGCCTGGGCGGCTTGGcaca > 2:1868177/1‑150 (MQ=255) gTCAGCGAGGCGACGAAACCTTGTGCCAGTGCTTCGGCACGGGCTTGCAGGGCGGCGTCGAACAGGAACACCGGGTTGATCGAACTCATTTCGGCATACACCGGGATGGGCTCCGGGCGCGCCTGGGCGGCTTGGCACAGtgccatgcca < 1:1671505/150‑1 (MQ=255) tCAGCGAGGCGACGAAACCTTGTGCCAGTGCTTCGGCACGGGCTTGCAGGGCGGCGTCGAACAGGAACACCGGGTTGATCGAACTCATTTCGGCATACACCGGGATGGGCTCCGGGCGCGCCTGGGCGGCTTGGCACAGTGCCATGCCAc > 2:363538/1‑150 (MQ=255) tCAGCGAGGCGACGAAACCTTGTGCCAGTGCTTCGGCACGGGCTTGCAGGGCGGCGTCGAACAGGAACACCGGGATGATCGAACGCATAACGGCATACACAGGGATGGGCTCCGGGCGCGCCTGGACGGCTAGGCACAGttccatgccgc > 2:451389/1‑148 (MQ=255) aGCGAGGCGACGAAACCTTGTGCCAGTGCTTCGGCACGGGCTTGCAGGGCGGCGTCGAACAGGAACACCGGGTTGATCGAACTCATTTCGGCATACACCGGGATGGGCTCCGGGCGCGCCTGGGCGGCTTGGCACAGTGCCATGCCACCg > 1:2152353/1‑150 (MQ=255) gCGAGGCGACGAAACCTTGTGCCAGTGCTTCGGCACGGGCTTGCAGGGCGGCGTCGAACAGGAACACCGGGTTGATCGAACTCATTTCGGCATACACCGGGATGGGCTCCGGGCGCGCCTGGGCGGCTTGGCACAGTGCCATGCCACCGc > 2:647246/1‑150 (MQ=255) gCGAGGCGACGAAACCTTGTGCCAGTGCTTCGGCACGGGCTTGCAGGGCGGCGTCGAACAGGAACACCGGGTTGATCGAACTCATTTCGGCATACACCGGGATGGGCTCCGGGCGCGCCTGGGCGGCTTGGCACAGTGCCATGCCACCGc > 1:2251053/1‑150 (MQ=255) gCGAGGCGAAGAACACTTGTCACCGTGCTCAGGCTCGGGCTTGCAGGGGGGGCCCTAACAGGAACACCGGGTTGAGCGAACTCATTTCGGCATACACCGGGATGGGCTCCGGGCGCGCCTGGGCGGCTTGGCACAGTGCCATGCCACCGc > 2:1233812/1‑150 (MQ=255) cGAGGCGACGAAACCTTGTGCCAGTGCTTCGGCACGGGCTTGCAGGGCGGCGTCGAACAGGAACACCGGGTTGATCGAACTCATTTCGGCATACACCGGGATGGGCTCCGGGCGCGCCTGGGTGGCATGGCACTGtgccaagccgcccag < 1:458046/150‑7 (MQ=255) cGAGGCGACGAAACCTTGTGCCAGTGCTTCGGCACGGGCTTGCAGGGCGGCGTCGAACAGGAACACCGGGTTGATCGAACTCATTTCGGCATACACCGGGATGGGCTCCGGGCGCGCCTGGGCGGCTTGGCACAGTGCCATGCCACCGCt > 2:1439926/1‑150 (MQ=255) gaAACCTCGTGCCAGTGCTTCGGCACGGGCTTGAAGGGCGGCGTCGAACAGGAAAACCGGGTTGCTAGAACTCATTTCGGCATACACCGGGATGGGCTCCGGGAACGCCTGGGCCGCTTGGCACAGTCCCATGCCACCGCCGCGCGAGcc > 2:650042/1‑150 (MQ=255) aaaCCTTGTGCCAGTGCTTCGGCACGGGCTTGCAGGGCGGCGTCGAACAGGAACACCGGGTTGATCGAACTCATTTCGGCATACACCGGGATGGGCTCCGGGCGCGCCTGGGCGGCTTGGCAAAGTGCCATGCCACCGCTGCGCGAGCCg < 2:1248744/150‑1 (MQ=255) aaCCTTGTGCCAGTGCTTCGGCACGGGCTTGCAGGGCGGCGTCGAACAGGAACACCGGGTTGATCGAACTCATTTCGGCATACACCGGGATGGGCTCCGGGCGCGCCTGGGCGGCTTGGCACAGTGCCATGCCACCGCTGCGCGAGCCgg < 1:1439926/150‑1 (MQ=255) aCCTTGTGCCAGTGCTTCGGCACGGGCTTGCAGGGCGGCGTCGAACAGGAACACCGGGTTGATCGAACTCATTTCGGCATACACCGGGATGGGCTCCGGGCGCGCCTGGGCGGCTTGGCACAGTGCCATGCCACCGCTGCGCGAGCCGGt < 1:647246/150‑1 (MQ=255) cTTGTGCCAGTGCTTCGGCACGGGCTTGCAGGGCGGCGTCGAACAGGAACACCGGGTTGATCGAACTCATTTCGGCATACACCGGGATGGGCTCCGGGCGCGCCTGGGCGGCTTGGCACAGTGCCATGCCACCGCTGCGCGAGCCGGTGa > 2:1431679/1‑150 (MQ=255) ttGTGCCAGTGCTTCGGCACGGGCTTGCAGGGCGGCGTCGAACAGGAACACCGGGTTGATCGAACTCATTTCGGCATACACCGGGATGGGCTCCGGGCGCGCCTGGGCGGCTTGGCACAGTGCCATGCCACCGCTGCGCGAGCCGGTGaa > 2:742590/1‑150 (MQ=255) ccAGTGCTTCGGCACGGGCTTGCAGGGCGGCGTCGAACAGGAACACCGGGTTGATCGAACTCATTTCGGCATACACCGGGATGGGCTCCGGGCGCGCCTGGGCGGCTTGGCACAGTGCCATGCCACCGCTGCGCGAGCCGGTGAAACCaa < 2:2152353/150‑1 (MQ=255) ccAGTGCTTCGCCACGCGCTTGCAGCGCGGCGTCGAACAGGAACACCGGGTTGATCGAACTCATTTCGGCATACACCGGGATGGGCTCCGGGCGCGCCTGGGCGGCTTGGCACAGTGCCATGCCACCGCTGCGCGAGCCGGTGAAACCaa < 2:1157644/150‑1 (MQ=255) cAGTGCTTCGGCACGGGCTTGCAGGGCGGCGTCGAACAGGAACACCGGGTTGATCGAACTCATTTCGGCATACACCGGGATGGGCTCCGGGCGCGCCTGGGCGGCTTGGCACAGTGCCATGCCACCGCTGCGCGAGCCGGGGAAACCAAc > 1:1701554/1‑150 (MQ=255) ttCGGCACGGGCTTGCAGGGCGGCGTCGAACAGGAACACCGGGTTGATCGAACTCATTTCGGCATACACCGGGATGGGCTCCGGGCGCGCCTGGGCGGCTTGGCACAGTGCTATGCCACCGCTGCGCGAGCCGGTGAAACCAACGGCCtt < 2:1395540/150‑1 (MQ=255) ttCGGCACGGGCTTGCAGGGCGGCGTCGAACAGGAACACCGGGTTGATCGAACTCATTTCGGCATACACCGGGATGGGCTCCGGGCGCGCCTGGGCGGCTTGGCACAGTGCCATGCCACCGCTGCGCGAGCCGGTGAAACCAACGGCCtt < 1:1868177/150‑1 (MQ=255) cGGGCTTGCAGGGCGGCGTCGAACAGGAACACCGGGTTGATCGAACTCATTTCGGCATACACCGGGATGGGCTCCGGGCGCGCCTGGGCGGCTTGGCACAGTGCCATGCCACCGCTGCGCGAGCCGGTGAAACCACCGGCCTTGAtgcat < 2:1299405/150‑5 (MQ=255) cGGGCTTGCAGGGCGGCGTCGAACAGGAACACCGGGTTGATCGAACTCATTTCGGCATACACCGGGATGGGCTCCGGGCGCGCCTGGGCGGCTTGGCACAGTGCCATGCCACCGCTGCGCGAGCCGGTGAAACCAACGGCCTTGATACGt < 2:1830922/150‑1 (MQ=255) cGGGCTTGCAGGGCGGCGTCGAACAGGAACACCGGGTTGATCGAACTCATTTCGGCATACACCGGGATGGGCTCCGGGCGCGCCTGGGCGGCTTGGCACAGTGCCATGCCACCGCTGCGCGAGCCGGTGAAACCAACGGCCTTGATACGt < 2:1444512/150‑1 (MQ=255) cGGGCTTGCAGGGCGGCGTCGAACAGGAACACCGGGTTGATCGAACTCATTTCGGCATACACCGGGATGGGCTCCGGGCGCGCCTGGGCGGCTTGGCACAGTGCCATGCCACCGCTGCGCGAGCCGGTGAAACCAACGGCCTTGATACGt < 1:2173257/150‑1 (MQ=255) gggCTTGCAGGGCGGCGTCGAACAGGAACACCGGGTTGATCGAACTCATTTCGGCATACACCGGGATGGGCTCCGGGCGCGCCTGGGCGGCTTGGCACAGtgcca < 2:2279015/105‑1 (MQ=255) gggCTTGCAGGGCGGCGTCGAACAGGAACACCGGGTTGATCGAACTCATTTCGGCATACACCGGGATGGGCTCCGGGCGCGCCTGGGCGGCTTGGCACAGtgcca > 1:2279015/1‑105 (MQ=255) ttGCAGGGCGGCGTCGAACAGGAACACCGGGTTGATCGAACTCATTTCGGCATACACCGGGATGGGCTCCGGGCGCGCCTGGGCGGCTTGGCACAGTGCCATGCCACCGCTGCGCGAGCCGGTGAAACCAACGGCCTTGATACGTGGGT‑c > 1:1471821/1‑150 (MQ=255) aGGGCGGCGTCGAACAGGAACACCGGGTTGATCGAACTCATTTCGGCATACACCGGGATGGGCTCCGGGCGCGCCTGGGCGGCTTGGCACAGTGCCATGCCACCGCTGCGCGAGCCGGTGAAACCAACGGCCTTGATACGTGGGT‑CGCTg > 2:1375135/1‑150 (MQ=255) ggcggcGTCGAACAGGAACACCGGGTTGATCGAACTCATTTCGGCATACACCGGGATGGGCTCCGGGCGCGCCTGGGCGGCTTGGCACAGTGCCATGCCACCGCTGCGCGAGCCGGTGAAACCAACGGCCTTGATACGTGGGT‑CGCt < 2:27446/147‑1 (MQ=255) ggcggcGTCGAACAGGAACACCGGGTTGATCGAACTCATTTCGGCATACACCGGGATGGGCTCCGGGCGCGCCTGGGCGGCTTGGCACAGTGCCATGCCACCGCTGCGCGAGCCGGTGAAACCAACGGCCTTGATACGTGGGT‑CGCt > 1:27446/1‑147 (MQ=255) cggcgTCGAACAGGAACACCGGGTTGATCGAACTCATTTCGGCATACACCGGGATGGGCTCCGGGCGCGCCTGGGCGGCTTGGCACAGTGCCATGCCACCGCTGCGCGAGCCGGTGAAACCAACGGCCTTGATACGTGGGT‑CGCTGACCa < 1:1375135/150‑1 (MQ=255) gcgTCGAACAGGAACACCGGGTTGATCGAACTCATTTCGGCATACACCGGGATGGGCTCCGGGCGCGCCTGGGCGGCTTGGCACAGTGCCATGCCACCGCTGCGCGAGCCGGTGAAACCAACGGCCTTGATACGTGGGT‑CGCTGACCaga < 1:363538/150‑1 (MQ=255) gcgTCGAACAGGAACACCGGGTTGATCGAACTCATTTCGGCATACACCGGGATGGGCTCCGGGCGCGCCTGGGCGGCTTGGCACAGTGCCATGCCACCGCTGCGCGAGCCGGTGAAACCAACGGCCTTGATACGTGGGT‑CGCTGACCaga < 2:2087834/150‑1 (MQ=255) gAACAGGAACACCGGGTTGATCGAACTCATTTCGGCATACACCGGGATGGGCTCCGGGCGCGCCTGGGCGGCTTGGCACAGtgccat < 1:616396/87‑1 (MQ=255) gAACAGGAACACCGGGTTGATCGAACTCATTTCGGCATACACCGGGATGGGCTCCGGGCGCGCCTGGGCGGCTTGGCACAGtgccat > 2:616396/1‑87 (MQ=255) gAACAGGAACACCGGGTTGATCGAACTCATTTCGGCATACACCGGGATGGGCTCCGGGCGCGCCTGGGCGGCATGGCACTGtgccaagc > 2:1293454/1‑86 (MQ=255) gAACAGGAACACCGGGTTGATCGAACTCATTTCGGCATACACCGGGATGGGCTCCGGGCGCGCCTGGGCGGCATGGCACTGtgccaagc < 1:1293454/89‑1 (MQ=255) acaCAGTAACACCGGGTTGCTCGAACTCTCTTCGGCATACATCGGGATTGGCTCGGGTCGCGCCTGGGCGGCTTGGCACAGTGCCATGCCACCGGTGCGGGAGCCGTTGAAACCATCGGCATTGATACGTGGGT‑CTCTGTCCAGAGCAAt < 2:505892/148‑1 (MQ=255) aaCAGGAACACCGGGTTGATCGAACTCATTTCGGCATACACCGGGATGGGCTCCGGGCGCGCCTGGGCGGCTTGGCACAGTGCCATGCCACCGCTGCGCGAGCCGGTGAAACCAACGGCCTTGATACGTGGGT‑CGCTGACCAGAGCAATg > 1:2395412/1‑150 (MQ=255) aaCAGGAACACCGGGTTGATCGAACTCATTTCGGCATACACCGGGATGGGCTCCGGGCGCGCCTGGGCGGCTTGGCACAGTGCCATGCCACCGCTGCGCGAGCCGGTGAAACCAACGGCCTTGATACGTGGGT‑CGCTGACCAGAGCAATg > 2:886078/1‑150 (MQ=255) aCAGGAACACCGGGTTGATCGAACTCATTTCGGCATACACCGGGATGGGCTCCGGGCGCGCCTGGGCGTCTTGGCACAGTGCCATGCCACCGCTGCGCGAGCCGGTGAAACCAACGGCCTTGATACGTGGGT‑CGCTGACCAGAGCAATGc > 1:2301130/1‑150 (MQ=255) aCAGGAACACCGGGTTGATCGAACTCATTTCGGCATACACCGGGATGGGCTCCGGGCGCGCCTGGGCGGCTTGGCACAGTGCCATGCCACCGCTGCGCGAGCCGGTGAAACCAACGGCCTTGATACGTGGGT‑CGCTGACCAGAGCAATGc > 2:1696563/1‑150 (MQ=255) aCAGGAACACCGGGTTGATCGAACTCATTTCGGCATACACCGGGATGGGCTCCGGGCGCGCCTGGGCGGCTTGGCACAGTGCCATGCCACCGCTGCGCGAGCCGGGGAAACCAACGGCCTTGATACGTGGGT‑CGCTGACCAGAGCAATGc > 2:1312693/1‑150 (MQ=255) gAACACCGGGTTGATCGAACTCATTTCGGCATACACCGGGATGGGCTCCGGGCGCGCCTGGGCGGCTTGGCACAGTGCCATGCCACCGCTGCGCGAGCCGGTGAAACCAACGGCCTTGATACGTGGGT‑CGCTGACCAGAGCAAt > 1:29521/1‑144 (MQ=255) gAACACCGGGTTGATCGAACTCATTTCGGCATACACCGGGATGGGCTCCGGGCGCGCCTGGGCGGCTTGGCACAGTGCCATGCCACCGCTGCGCGAGCCGGTGAAACCAACGGCCTTGATACGTGGGT‑CGCTGACCAGAGCAAt < 2:29521/144‑1 (MQ=255) gAACACCGGGTTGATCGAACTCATTTCGGCATACACCGGGATGGGCTCCGGGCGCGCCTGGGCGGCTTGGCACAGTGCCATGCCACCGCTGCGCGAGCCGGTGAAACCAACGGCCTTGATACGTGGGT‑CGCTGACCAGAGCAATGCCCAc > 1:1377697/1‑150 (MQ=255) acCGGGTTGATCGAACTCATTTCGGCATACACCGGGATGGGCTCCGGGCGCGCCTGGGCGGCTTGGCACAGTGCCATGCCACCGCTGCGCGAGCCGGTGAAACCAACGGCCTTGATACGTGGGT‑CGCTGACCaga < 1:77896/135‑1 (MQ=255) acCGGGTTGATCGAACTCATTTCGGCATACACCGGGATGGGCTCCGGGCGCGCCTGGGCGGCTTGGCACAGTGCCATGCCACCGCTGCGCGAGCCGGTGAAACCAACGGCCTTGATACGTGGGT‑CGCTGACCaga > 2:77896/1‑135 (MQ=255) ggTTGATCGAACTCATTTCGGCATACACCGGGATGGGCTCCGGGCGCGCCTGGGCGGCTTGGCACAGTGCCATGCCACCGCTGCGCGAGCCGGTGAAACCAACGGCCTTGATACGTGGGT‑CGCTGACCAGAGCAATGCCCAc < 2:1372419/142‑1 (MQ=255) ggTTGATCGAACTCATTTCGGCATACACCGGGATGGGCTCCGGGCGCGCCTGGGCGGCTTGGCACAGTGCCATGCCACCGCTGCGCGAGCCGGTGAAACCAACGGCCTTGATACGTGGGT‑CGCTGACCAGAGCAATGCCCAc > 1:1372419/1‑142 (MQ=255) gATCGAACTCATTTCGGCATACACCGGGATGGGCTCCGGGCGCGCCTGGGCGGCTTGGCACAGTGCCATGCCACCGCGGCGCGAGCCGGTGAAACCAACGGCCTTGATACGTGGGT‑CGCTGACCAGAGCAATGCCCACTTCGCGGCCGGa < 2:349148/150‑1 (MQ=255) aaCTCATTTCGGCATACACCGGGATGGGCTCCGGGCGCGCCTGGGCGGCTTGGCACAGtgcc < 1:499596/62‑1 (MQ=255) aaCTCATTTCGGCATACACCGGGATGGGCTCCGGGCGCGCCTGGGCGGCTTGGCACAGtgcc > 2:499596/1‑62 (MQ=255) aTTTCGGCATACACCGGGATGGGCTCCGGGCGCGCCTGGGCGGCTTGGCACAGTGCCATGCCACCGCTGCGCGAGCCg < 1:1038961/78‑1 (MQ=255) aTTTCGGCATACACCGGGATGGGCTCCGGGCGCGCCTGGGCGGCTTGGCACAGTGCCATGCCACCGCTGCGCGAGCCg > 2:1038961/1‑78 (MQ=255) aTTTCGGCATACACCGGGATGGGCTCCGGGCGCGCCTGGGCGGCTTGGCACAGTGCCATGCCACCGCTGCGCGAGCCGGTGAAACCAACGGCCTTGATACGTGGGT‑CGCTGACCAGAGCAATGCCCACTTCGCGGCCGGAGCCATAAagc > 1:2259338/1‑150 (MQ=255) tCGGCATACACCGGGATGGGCTCCGGGCGCGCCTGGGCGGCTTGGCACAGTGCCATGCCACCGCTGCGCGAGCCGGTGAAACCAACGGCCTTGATACGTGGGT‑CGCTGACCAGAGCAATGCCCACTTCGCGGCCGGAGCCATAAagcagc > 1:889377/1‑150 (MQ=255) cATACACCGGGATGGGCTCCGGGCGCGCCTGGGCGGCTTGGCACAGTGCCATGCCACCGCTGCGCGAGCCGGTGAAACCAACGGCCTTGATACGTGGGT‑CGCTGACCAGAGCAATGCCCACTTCGCGGCCGGAGCCATAAAGCAGCgaga > 2:1264085/1‑150 (MQ=255) aTACACCGGGATGGGCTCCGGGCGCGCCTGGGCGGCTTGGCATAGTGCCATGCCACCGCTGCGCGAGCCGGTGAAACCAACGGCCTTGATACGTGGGT‑CGCTGACCAGAGCAATGCCCACTTCGCGGCCGGAGCCATAAAGCAGCGAGaa < 1:451389/150‑1 (MQ=255) aTACACCGGGATGGGCTCCGGGCGCGCCTGGGCGGCTTGGCACAGTGCCATGCCACCGCTGCGCGAGCCGGTGAAACCAACGGCCTTGATACGTGGGT‑CGCTGACCAGAGCAATGCCCACTTCGCGGCCGGAGCCATAAAGCAGCGAGaa > 2:2158642/1‑150 (MQ=255) acCGGGATGGGCTCCGGGCGCGCCTGGGCGGCTTGGCACAGTGCCATGCCACCGCTGCGCGAGCCGGTGAAACCAACGGCCTTGATACGTGGGT‑CGCTGACCAGAGCAATGCCCACTTCGCGGCCGGAGCCAt > 1:1408978/1‑133 (MQ=255) acCGGGATGGGCTCCGGGCGCGCCTGGGCGGCTTGGCACAGTGCCATGCCACCGCTGCGCGAGCCGGTGAAACCAACGGCCTTGATACGTGGGT‑CGCTGACCAGAGCAATGCCCACTTCGCGGCCGGAGCCAt < 2:1408978/133‑1 (MQ=255) acCGGGATGGGCTCCGGGCGCGCCTGGGCGGCTTGGCACAGTGCCATGCCACCGCTGCGCGAGCCGGTGAAACCAACGGCCTTGATACGTGGGT‑CGCTGACCAGAGCAATGCCCACTTCGCGGCCGGAGCCATAAAGCAGCGAGAacaca > 1:415394/1‑150 (MQ=255) acCGGGATGGGCTCCGGGCGCGCCTGGGCGGCTTGGCACAGTGCCATGCCACCGCTGCGCGAGCCGGTGAAACCAACGGCCTTGATACGTGGGT‑CGCTGACCAGAGCAATGCCCACTTCGCGGCCGGAGCCATAAAGCAGCGAGAacaca > 2:2027848/1‑150 (MQ=255) ccGGGATGGGCTCCGGGCGCGCCTGGGCGGCTTGGCACAGTGCCATGCCACCGCTGCGCGAGCCGGTGAAACCAACGGCCTTGATACGTGGGT‑CGCTGACCAGAGCAATGCCCACTTCGCGGCCGGAGCCATAAAGCAGCGAGAacacac < 1:1233812/150‑1 (MQ=255) cGGGAGGGGCTCCGGGCGCGCCTGGGCGGCTTGGCACAGTGCCATGCCACCGCTGCGCGAGCCGGTGAAACCAACGGCCTTGATACGTGGGT‑CGCTGACCAGAGCAATGCCCACTTCGCGGCCGGAGCCATAAAGCAGCGAGAACACAcc < 1:650042/150‑1 (MQ=255) ggATGGGCTCCGGGCGCGCCTGGGCGGCTTGGCACAGTGCCATGCCACCGCTGCGCGAGCCGGTGAAACCAACGGCCTTGATACGTGGGT‑CGCTGACCAGAGCAATGCCCACTTcgcg > 1:198640/1‑118 (MQ=255) ggATGGGCTCCGGGCGCGCCTGGGCGGCTTGGCACAGTGCCATGCCACCGCTGCGCGAGCCGGTGAAACCAACGGCCTTGATACGTGGGT‑CGCTGACCAGAGCAATGCCCACTTcgcg < 2:198640/118‑1 (MQ=255) ggATGGGCTCCGGGCGCGCCTGGGCGGCTTGGCACAGTGCCATGCCACCGCTGCGCGAGCCGGTGAAACCAACGGCCTTGATACGTGGGT‑CGCTGACCAGAGCAATGCCCACTTCGCGGCCGGAGCCATAAAGCAGCGAGAACACACCCt > 2:1991125/1‑150 (MQ=255) gATGGGCTCCGGGCGCGCCTGGGCGGCTTGGCACAGTGCCATGCCACCGCTGCGCGAGCCGGTGAAACCAACTGCCTTGCTTTGAAGCTGTGCT‑TGGAGAGTAATGCCCACTTCGCGGCCGGAGCCATAAAGCAGCGAGAACACACCCTc > 1:891799/1‑150 (MQ=255) gATGGGCTCCGGGCGCGCCTGGGCGGCTTGGCACAGTGCCATGCCACCGCTGCGCGAGCCGGTGAAACCAACGGCCTTGATACGTGGGT‑CGCTGACCAGAGCAATGCCCACTTCGCGGCCGGAGCCATAAAGCAGCGAGAACACACCCTc < 2:2251053/150‑1 (MQ=255) aTGGGCTCCGGGCGCGCCTGGGCGGCTTGGCACAGTGCCATGCCACCGCTGCGCGAGCCGGTGAAACCAACGGCCTTGATACGTGGGT‑CGCTGACCAGAGCAATGCCCACTTCGCGGCCGGAGCCATAAAGCAGCGAGAACACACCCTcc > 1:113940/1‑150 (MQ=255) cTCCGGGCGCGCCTGGGCGGCTTGGCACAGTGCCATGCCACCGCTGCGCGAGCCGGTGAAACCAACGGCCTTGATACGTGGGT‑CGCTGACCAGAGCAATGCCCACTTCGCGGCCGGAGCCATAAAGCAGCGAGAacaca < 1:580567/139‑1 (MQ=255) cTCCGGGCGCGCCTGGGCGGCTTGGCACAGTGCCATGCCACCGCTGCGCGAGCCGGTGAAACCAACGGCCTTGATACGTGGGT‑CGCTGACCAGAGCAATGCCCACTTCGCGGCCGGAGCCATAAAGCAGCGAGAacaca > 2:580567/1‑139 (MQ=255) cTCCGGGCGCGCCTGGGCGGCTTGGCACAGTGCCATGCCACCGCTGCGCGAGCCGGTGAAACCAACGGCCTTGATACGTGGGT‑CGCTGACCAGAGCAATGCCCACTTCGCGGCCGGAGCCATAAAGCAGCGAGAACACACCCTCCGGTaa > 2:132849/1‑150 (MQ=255) tCCGGGCGCGCCTGGGCGGCTTGGCACAGTGCCATTCCACCGCTGCGCGAGCCGGTGAAACCAACGGCCTTGATACGTGGGT‑CGCTGACCAGAGCAATGCCCACTTCGCGGCCGGAGCCATAAAGCAGCGAGAACACACCCTCCGGTAAg > 1:1042470/1‑150 (MQ=255) tCCGGGCGCGCCTGGGCGGCTTGGCACAGTGCCATGCCACCGCTGCGCGAGCCGGTGAAACCAACGGCCt < 2:1078586/70‑1 (MQ=255) tCCGGGCGCGCCTGGGCGGCTTGGCACAGTGCCATGCCACCGCTGCGCGAGCCGGTGAAACCAACGGCCt > 1:1078586/1‑70 (MQ=255) tCCGGGCGCGCCTGGGCGGCTTGGCACAGTGCCATGCCACCGCTGCGCGAGCCGGTGAAACCAACGGCCTTGATACGTGGGT‑CGCTGACCAGAGCAATGCCCACTTCGCGGCCGGAGCCATa < 2:2265584/122‑1 (MQ=255) tCCGGGCGCGCCTGGGCGGCTTGGCACAGTGCCATGCCACCGCTGCGCGAGCCGGTGAAACCAACGGCCTTGATACGTGGGT‑CGCTGACCAGAGCAATGCCCACTTCGCGGCCGGAGCCATa > 1:2265584/1‑122 (MQ=255) tCCGGGCGCGCCTGGGCGGCTTGGCACAGTGCCATGCCACCGCTGCGCGAGCCGGTGAAACCAACGGCCTTGATACGTGGGT‑CGCTGACCAGAGCAATGCCCACTTCGCGGCCGGAGCCATAAAGCAGCGAGAACACACCCTCCGGTAAg > 2:1674936/1‑150 (MQ=255) tCCGGGCGCGCCTGGCCGGCTTGGCACAGTGCCATGCCACCGCTGCGCGAGCCGGTGAAACCAACGGCCTTGATACGTGGGT‑CGCTGACCAGAGCAATGCCCACTTCGCGGCCGGAGCCATAAAGCAGCGAGAACACACCCTCCGGTAAg > 2:169890/1‑150 (MQ=255) ggCGCGCCTGGGCGGCTTGGCACAGTGCCATGCCACCGCTGCGCGAGCCGGTGAAACCAACGGCCTTGATACGTGGGT‑CGCTGACCAGAGCAATGCCCACTTCGCGGCCGGAGCCATAAAGCAGCGAGAACACACCCTCCGGTAAGCCGc < 1:1431679/150‑1 (MQ=255) cTGGGCGGCTTGGCACAGTGCCATGCCACCGCTGCGCGAGCCGGTGAAACCAACGGCCTTGATACGTGGGT‑CGCTGACCAGAGCAATGCCCACTTCGCGGCCGGAGCCATAAAGCAGCGAGAACACACCCTCCGGTAAGCCGcactgctt < 2:889377/150‑1 (MQ=255) tGGGCGGCTTGGCACAGTGCCATGCCACCGCTGCGCGAGCCGGTGAAACCAACGGCCTTGATACGTGGGT‑CGCTGACCAGAGCAATGCCCACTTCGCGGCCGGAGCCATAAAGCAGCGAGAACACACCCTCCGGTAAGCCGcactgcttc > 2:2221382/1‑150 (MQ=255) ttGGCACAGTGCCATGCCACCGCTGCGCGAGCCGGTGAAACCAACGGCCTTGATACGTGGGT‑CGCTGACCAGAGCAATGCCCACTTCGCGGCCGGAGcc < 2:1032668/99‑1 (MQ=255) ttGGCACAGTGCCATGCCACCGCTGCGCGAGCCGGTGAAACCAACGGCCTTGATACGTGGGT‑CGCTGACCAGAGCAATGCCCACTTCGCGGCCGGAGcc > 1:1032668/1‑99 (MQ=255) ttGGCACAGTGCCATGCCACCGCTGCGCGAGCCGGTGAAACCAACGGCCTTGATACGTGGGT‑CGCTGACCAGAGCAATGCCCACTTCGCGGCCGGAGCCATAAAGCAGCGAGAACACACCCTCCGGTAAGCCGCACTGCTTCACTGCTTg > 1:628512/1‑150 (MQ=255) ttGGCACAGTGCCATGCCACCGCTGCGCGAGCCGGTGAAACCAACGGCCTTGATACGTGGGT‑CGCTGACCAGAGCAATGCCCACTTCGCGGCCGGAGCCATAAAGCAGCGAGAACACACCCTCCGGTAAGCCGCACTGCTTCACTGCTTg > 1:1450779/1‑150 (MQ=255) atGGCACTGTGCCAAGCCACCGCTGCGCGAGCCGGTGAAACCAACGGCCTTGATACGTGGGT‑CGCTGACCAGAGCAATGCCCACTTCGCGGCCGGAGCCATAAagcag > 2:1076485/2‑108 (MQ=255) atGGCACTGTGCCAAGCCACCGCTGCGCGAGCCGGTGAAACCAACGGCCTTGATACGTGGGT‑CGCTGACCAGAGCAATGCCCACTTCGCGGCCGGAGCCATAAagcag < 1:1076485/107‑1 (MQ=255) atGGCACTGTGCCAAGCCACCGCTGCGCGAGCCGGTGAAACCAACGGCCTTGATACGTGGGT‑CGCTGACCAGAGCAATGCCCACTTCGCGGCCGGAGCCATAAAGCAGCGAGAACACACCCTCCGGTAAGCCGCACTGCTTCACTGCTTg > 1:249545/2‑150 (MQ=255) tGGCACAGTGCCATGCCACCGCTGAGCGAGCCGGTGAAACCAACGGCCTTGATACGTGGGT‑CGCTGACCAGAGCAATGCCCACTTCGCGGCCGGAGCCATAAAGCAGCGAGAACACACCCTCCGGTAAGACGccctacgtcactgggttg < 2:1731006/150‑6 (MQ=255) tGGCACAGGGCCATGCCACCGCTGCGCGAGCCGGTGAAACCAACGGCCTTGATACGTGGGT‑CGCGGACCAGAGCAATGCCCACTTCGCGGCCGGAGCCATAAAGCAGCGAGAACACACCCTCCGGTAAGCCGCACTGCTTCACTGCTTgt < 1:468898/150‑2 (MQ=255) gCACAGTGCCATGCCACCGCTGCGCGAGCCGGTGAAACCAACGGCCtt < 2:1512892/48‑1 (MQ=255) gCACAGTGCCATGCCACCGCTGCGCGAGCCGGTGAAACCAACGGCCtt > 1:1512892/1‑48 (MQ=255) | CGGCGCCCTGGGTCAGCGAGGCGACGAAACCTTGTGCCAGTGCTTCGGCACGGGCTTGCAGGGCGGCGTCGAACAGGAACACCGGGTTGATCGAACTCATTTCGGCATACACCGGGATGGGCTCCGGGCGCGCCTGGGCGGCTTGGCACAGTGCCATGCCACCGCTGCGCGAGCCGGTGAAACCAACGGCCTTGATACGTGGGT‑CGCTGACCAGAGCAATGCCCACTTCGCGGCCGGAGCCATAAAGCAGCGAGAACACACCCTCCGGTAAGCCGCACTGCTTCACTGCTTGC > NC_002947/1435076‑1435368 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |