| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,478,193 | C→A | 6.1% | G280G (GGC→GGA) | PP_1291 → | PhoH family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,478,193 | 0 | C | A | 6.1% | 369.1 / 6.9 | 115 | G280G (GGC→GGA) | PP_1291 | PhoH family protein |
| Reads supporting (aligned to +/- strand): ref base C (58/49); new base A (4/3); total (63/52) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.72e-01 | |||||||||||
Only 100 of 118 total aligned reads displayed.
TCGTGACGACGAACTGCTGCTACTCGACCTGCACCAGGAGCCTTTGCTGCACCAGGAAGCCTGGGGCCTGAAACCACGCGACATTCATCAAAGCCTGGCGCTGTTCGCCCTGCTGGACCCGGATATCCACCTGGTGAACCTGACCGGCGCCGCCGGCTCCGGTAAAACCATCCTGGCACTGGCTGCGGCCATCGAGCAAACCATGGTCAGCAAGCGCTACCGGCGCATCATCGCCACCCGCAGCGTGCAGGGGCTGGATCAGGAGATTGGCTTCCTGCCGGGTACCGAAGCAGAGA > NC_002947/1478046‑1478341 | tCGTGACGACGAACTGCTGCTACTCGACCTGCACCAGGAGCCTTTGCTGCACCAGGAAGCCTGGGGCCTGAAACCACGCGACATTCATCAAAGCCTGGCGCTGTTCGCCCTGCTGGACCCGGATATCCACCTGGTGAACCTGACCGgcgc > 2:680746/1‑150 (MQ=255) tGACGACGAACTGCTGCTACTCGACCTGCACCAGGAGCCTTTGCTGCACCAGGAAGCCTGGGGCCTGAAACCACGCGACATTCATCAAAGCCTGGCGCTGTTCGCCCTGCTGGACCCGGATATCCACCTGGTGAACCTGACCGGcgccgc > 1:1073337/1‑150 (MQ=255) gacgaACTGCTGCTACTCGACCTGCACCAGGAGCCTTTGCTGCACCAGGCAGCCTGGGGCCTGAAACCACGCGACATTCATCAAAGCCTGGCGCTGTTCGCCCTGCTGGACCCGGATATCCACCTGGTGAACCTGACCGGCGCCGCCGGc > 1:174100/1‑150 (MQ=255) gaACTGCTGCTACTCGACCTGCACCAGGAGCCTTTGCTGCACCAGGAAGCCTGGGGCCTGAAACCACGCGACATTCATCAAAGCCTGGCGCTGTTCGCCCTGCTGGACCCGGATATCCACCTGGTGAACCTGACCGGCGCCGCCGGCTcc > 2:707298/1‑150 (MQ=255) aaCTGCTGCTACTCGACCTGCACCAGGAGCCTTTGCTGCACCAGGAAGCCTGGGGCCTGAAACCACGCGACATTCATCAAAGCCTGGCGCTGTTCGCCCTGCTGGACCCGGATATCCACCTGGTGAACCTGACCGGCGCCGCCGGCTCCg < 2:1220089/150‑1 (MQ=255) tgctACTCGACCTGCACCAGGAGCCTTTGCTGCACCAGGAAGCCTGGGGCCTGAAACCACGCGACATTCATCAAAGCCTGGCGCTGTTCGCCCTGCTGGACCCGGATATCCTCCTGGTGAACCTGACCGGCgccgcc < 2:868677/137‑1 (MQ=255) tgctACTCGACCTGCACCAGGAGCCTTTGCTGCACCAGGAAGCCTGGGGCCTGAAACCACGCGACATTCATCAAAGCCTGGCGCTGTTCGCCCTGCTGGACCCGGATATCCACCTGGTGAACCTGACCGGCgccgcc > 1:868677/1‑137 (MQ=255) ctcgcggtGCACCAGGAGCCTTTGCTGCACCAGGAAGCCTGGGGCCTGAAACCACGCGACATTCATCAAAGCATGGCGCTGTTCGCCCTGCTGGACCCGGATATCCACCTGGTGAACCTGACCGGCGCCGCCGGCTCCGGTAAAACCATc < 2:1073337/143‑1 (MQ=255) cTCGACCTGCACCAGGAGCCTTTGCTGCACCAGGAAGCCTGGGGCCTGAAACCACGCGACATTCATCAAAGCCTGGCGCTGTTCGCCCTGCTGGACCCGGATATCCACCTGGTGAACCTGACCGGAGCCGGCGGCGCCGGtcag < 1:249271/144‑4 (MQ=255) tCGACCTGCACCAGGAGCCTTTGCTGCACCAGGAAGCCTGGGGCCTGAAACCACGCGACATTCATCAAAGCCTGGCGCTGTTCGCCCTGCTGGACCCGGATATCCACCTGGTGAACCTGACCGGCGCCGCCGGCTCCGGTAAAACCATcc > 2:1950159/1‑150 (MQ=255) cAGGAGCCTTTGCTGCACCAGGAAGCCTGGGGCCTGAAACCACGCGACATTCATCAAAGCCTGGCGCTGTTCGCCCTGCTGGACCCGGATATCCACCTGGTGAACCTGACCGGCGCCGCCGGCTc < 1:2142792/125‑1 (MQ=255) cAGGAGCCTTTGCTGCACCAGGAAGCCTGGGGCCTGAAACCACGCGACATTCATCAAAGCCTGGCGCTGTTCGCCCTGCTGGACCCGGATATCCACCTGGTGAACCTGACCGGCGCCGCCGGCTc > 2:2142792/1‑125 (MQ=255) cAGGAGCCTGTGCTGCACCAGGAAGCCTGGGGCCTGAAACCACGCGACATTCATCAAAGCCTGGCGCTGTTCGCCCTGCTGGACCCGGATATCCACCTGGTGAACCTGACCGGCGCCGCCGGCTCCGGTAAAACCATCCTGGCACTGGCt > 2:1243965/1‑150 (MQ=255) aGGAGCCTTTGCTGCACCAGGAAGCCTGGGGCCTGAAACCACGCGACATTCATCAAAGCCTGGCGCTGTTCGCCCTGCTGGACCCGGATATCCACCTGGTGAACCTGACCGGCGCCGCCGGCTCCGGTAAAACCATCCTGGCACTGGCTg > 1:1006475/1‑150 (MQ=255) ggAGCCTTTGCTGCACCAGGAAGCCTGGGGCCTGAAACCACGCGACATTCATCAAAGCCTGGCGCTGTTCGCCCTGCTGGACCCGGATATCCACCTGGTGAACCTGACCGGCGCCGCCGGCTCCGGTAAAACCATCCTGGCACTGGCTgg > 1:589630/1‑149 (MQ=255) aGCCTTTGCTGCACCAGGAAGCCTGGGGCCTGAAACCACGCGACATTCATCAAAGCCTGGCGCTGTTCGCCCTGCTGGACCCGGATATCCACCTGGTGAACCTGACCGGCGCCGCCGGCTCCGGTAAAACCATCCTGGCACTGGCTGCgg < 2:1615954/150‑1 (MQ=255) cTTTGCTGCACCAGGAAGCCTGGGGCCTGAAACCACGCGACATTCATCAAAGCCTGGCGCTGTTCGCCCTGCTGGACCCGGATATCCACCTGGTGAACCTGACCGGCGCCGCCGGCTCCGGTAAAACCATCCTGGCACTGGCTGCGGccc > 1:2249918/1‑149 (MQ=255) ttGCTGCACCAGGAAGCCTGGGGCCTGAAACCACGCGACATTCATCAAAGCCTGGCGCTGTTCGCCCTGCTGGACCCGGATATCCACCTGGTGAACCTGACCGGCGCCGCCGGCTCCGGTAAAACCATCCTGGCACTGGCTGCGGCCATc < 1:707298/150‑1 (MQ=255) ttGCTGCACCAGGAAGCCTGGGGCCTGAAACCACGCGACATTCATCAAAGCCTGGCGCTGTTCGCCCTGCTGGACCCGGATATCCACCTGGTGAACCTGACCGGCGCCGCCGGCTCCGGTAAAACCATCCTGGCACTGGCTGCGGCCATc < 2:86818/150‑1 (MQ=255) ttGCTGCACCAGGAAGCCTGGGGCCTGAAACCACGCGACATTCATCAAAGCCTGGCGCTGTTCGCCCTGCTGGACCCGGATATCCACCTGGTGAACCTGACCGGCGCCGCCGGCTCCGGTAAAACCATCCTGGCACTGGCTGCGGCCATc > 2:2316600/1‑150 (MQ=255) ccAGGAAGCCTGGGGCCTGAAACCACGCGATATTCATCAAAGCCTGGCGCTGTTCGCCCTGCTGGACCCGGATATCCACCTGGTGAACCTGACCGGCGCCGCCGGCTCCGGTAAAACCATCCTGGCACTGGCTGCGGCCATCGAGCAAAc > 1:65268/1‑150 (MQ=255) cAGGAAGCCTGGGGCCTGAAACCACGCGACATTCATCAAAGCCTGGCGCTGTTCGCCCTGCTGGACCCGGATATCCACCTGGTGAACCTGACCGGCGCCGCCGGCTCCGGTAAAACCATCCTGGCACTGGCTGCGGCCATCGAGCAAAcc > 2:1489528/1‑150 (MQ=255) aGGAAGCCTGGGGCCTGAAACCACGCGACATTCATCAAAGCCTGGCGCTGTTCGCCCTGCTGGACCCGGATATCCACCTGGTGAACCTGACCGGCGCCGCCGGCTCCGGTAAAACCATCCTGGCACTGGCTGCGGCCATCGAGCAAACCa > 1:875365/1‑150 (MQ=255) ggAAGCCTGGGGCCTGAAACCACGCGACATTCATCAAAGCCTGGCGCTGTTCGCCCTGCTGGACCCGGATATCCACCTGGTGAACCTGACCGGCGCCGCCGGCTCCGGTAAAACCATCCTGGCACTGGCTGCGGCCATCGa < 1:308572/141‑1 (MQ=255) ggAAGCCTGGGGCCTGAAACCACGCGACATTCATCAAAGCCTGGCGCTGTTCGCCCTGCTGGACCCGGATATCCACCTGGTGAACCTGACCGGCGCCGCCGGCTCCGGTAAAACCATCCTGGCACTGGCTGCGGCCATCGa > 2:308572/1‑141 (MQ=255) ggAAGCCTGGGGCCTGAAACCACGCGACATTCATCAAAGCCTGGCGCTGTTCGCCCTGCTGGACCCGGATATCCACCTGGTGAACCTGACCGGCGCCGCCGGCTCCGGTAAAACCATCCTGGCACTGGCTGCGGCCATCGAGCAAACCAt < 1:1950159/150‑1 (MQ=255) gAAGCCTGGGGCCTGAAACCACGCGACATTCATCAAAGCCTGGCGCTGTTCGCCCTGCTGGACCCGGATATCCACCTGGTGAACCTGACCGGCGCCGCCGGCTCCGGTAAAAc > 2:2004364/1‑113 (MQ=255) gAAGCCTGGGGCCTGAAACCACGCGACATTCATCAAAGCCTGGCGCTGTTCGCCCTGCTGGACCCGGATATCCACCTGGTGAACCTGACCGGCGCCGCCGGCTCCGGTAAAAc < 1:2004364/113‑1 (MQ=255) gAAGCCTGGGGCCTGAAACCACGCGACATTCATCAAAGCCTGGCGCTGTTCGCCCTGCTGGACCCGGATATCCACCTGGTGAACCTGACCGGCGCCGCCGGCTCCGGTAAAACCATCCTGGCACTGGCTGCGGCCATCGAGCAAACCATg < 2:875365/150‑1 (MQ=255) gAAGCCTGGGGCCTGAAACCACGCGACATTCATCAAAGCCTGGCGCTGTTCGCCCTGCTGGACCCGGATATCCACCTGGTGAACCTGACCGGCGCCGCCGGCTCCGGTAAAACCATCCTGGCACTGGCTGCGGCCATCGAGCAAACCATg > 1:1059917/1‑150 (MQ=255) aGCCTGGGGCCTGAAACCACGCGACATTCATCAAAGCCTGGCGCTGTTCGCCCTGCTGGACCCGGATATCCACCTGGTGAACCTGACCGGCGCCGCCGGCTCCGGTAAAACCATCCTGGCACTGGCTGCGGCCATCGAGCAAACCATGGt > 2:2229482/1‑150 (MQ=255) tGGGGCCTGAAACCACGCGACATTCATCAAAGCCTGGCGCTGTTCGCCCTGCTGGACCCGGATATCCACCTGGTGAACCTGACCGGCGCCGCCGGCTCCGGTAAAACCATCCTGGCACTGGCTGCGGCCATCGAGCAAACCATGGTCAGc < 1:1217465/150‑1 (MQ=255) cTGAAACCACGCGACATTCATCAAAGCCTGGCGCTGTTCGCCCTGCTGGACCCGGATATGCACCTGGTGAACCTGACCGGCGCCGCCGGCTCCGGTAAAACCATCCTGGCACTGGCTGCGGCCATCGAGCAAACCATGGTCAGCAAgcgc > 2:414524/1‑150 (MQ=255) gAAACCACGCGACATTCATCAAAGCCTGGCGCTGTTCGCCCTGCTGGACCCGGATATCCACCTGGTGAACCTGACCGGCGCCGCCGGCTc < 1:698371/90‑1 (MQ=255) gAAACCACGCGACATTCATCAAAGCCTGGCGCTGTTCGCCCTGCTGGACCCGGATATCCACCTGGTGAACCTGACCGGCGCCGCCGGCTc > 2:698371/1‑90 (MQ=255) gAAACCACGCGACATTCATCAAAGCCTGGCGCTGTTCGCCCTGCTGGACCCGGATATCCACCTGGTGAACCTGACCGGCGCCGCCGGCTCCGGTAAAACCATCCTGGCACTGGCTGCGGCCATCGAGCAAACCATGGTCAGCAAGCGCTa > 1:831316/1‑150 (MQ=255) aCCACGCGACATTCATCAAAGCCTGGCGCTGTTCGCCCTGCTGGACCCGGATATCCACCTGGTGAACCTGACCGGCGCCGCCGGCTCCGGTAAAACCATCCTGGCACTGGCt > 2:2333711/1‑112 (MQ=255) aCCACGCGACATTCATCAAAGCCTGGCGCTGTTCGCCCTGCTGGACCCGGATATCCACCTGGTGAACCTGACCGGCGCCGCCGGCTCCGGTAAAACCATCCTGGCACTGGCTGCGGCCATCGAGc < 2:1402572/125‑1 (MQ=255) aCCACGCGACATTCATCAAAGCCTGGCGCTGTTCGCCCTGCTGGACCCGGATATCCACCTGGTGAACCTGACCGGCGCCGCCGGCTCCGGTAAAACCATCCTGGCACTGGCTGCGGCCATCGAGc > 1:1402572/1‑125 (MQ=255) aCGCGACATTCATCAAAGCCTGGCGCTGTTCGCCCTGCTGGACCCGGATATCCACCTGGTGAACCTGACCGGCGCCGCCGGCTCCGGTAAAACCATCCTGGCACTGGCTGCGGCCATCGAGCAAACCATgg < 1:2292565/131‑1 (MQ=255) aCGCGACATTCATCAAAGCCTGGCGCTGTTCGCCCTGCTGGACCCGGATATCCACCTGGTGAACCTGACCGGCGCCGCCGGCTCCGGTAAAACCATCCTGGCACTGGCTGCGGCCATCGAGCAAACCATgg > 2:2292565/1‑131 (MQ=255) aCGCGACATTCATCAAAGCCTGGCGCTGTTCGCCCTGCTGGACCCGGATATCCACCTGGTGAACCTGACCGGCGCCGCCGGCTCCGGTAAAACCATCCTGGCACTGGCTGCGGCCATCGAGCAAACCATGGTCAGCAAGCGCTACCGgcg > 2:1967282/1‑150 (MQ=255) cgcgACATTCATCAAAGCCTGGCGCTGTTCGCCCTGCTGGACCCGGATATCCACCTGGTGAACCTGACCGGCGccgccg > 1:1554442/1‑79 (MQ=255) cgcgACATTCATCAAAGCCTGGCGCTGTTCGCCCTGCTGGACCCGGATATCCACCTGGTGAACCTGACCGGCGccgccg < 2:1554442/79‑1 (MQ=255) cgagACATTCATCAAAGCCTGGCGCTGTTCGCCCTGCTGGACCCGGATATCCACCGGGTGAACCTGACCGGGGCCGCCGGCTCCGGTAAAACCATCCTGGCACTGGCTGGGGCCATCGAGCAAACCATGGTCAGCAAGCGCTACCGgcgc > 2:1320138/4‑150 (MQ=255) aTTCATCAAAGCCTGGCGCTGTTCGCCCTGCTGGACCCGGATATCCACCTGGTGAACCTGACCGGCGCCGCCGGCTCCGGTAAAACCATCCTGGCACTGGCTGCGGCCATCGAGCAAACCATGGTCAGCAAGCGCTACCGGCGCatcatc < 2:424409/150‑1 (MQ=255) aTTCATCAAAGCCTGGCGCTGTTCGCCCTGCTGGACCCGGATATCCACCTGGTGAACCTGACCGGCGCCGCCGGCTCCGGTAAAACCATCCTGGCACTGGCTGCGGCCATCGAGCAAACCATGGTCAGCAAGCGCTACCGGCGCatcatc < 2:1059917/150‑1 (MQ=255) ttCATCAAAGCCTGGCGCTGTTCGCCCTGCTGGACCCGGATATCCACCTGGTGAACCTGACCGGCGCCGCCGGCTCCGGTAAAACCATCCTGGCACTGGCTGCGGCCATCGAGCAAACCATGGTCAGCAAGCGCTACCGGCGCATCATCg < 2:1006475/150‑1 (MQ=255) ttCATCAAAGCCTGGCGCTGTTCGCCCTGCTGGACCCGGATATCCACCTGGTGAACCTGACCGGCGCCGCCGGCTCCGGTAAAACCATCCTGGCACTGGCTGCGGCCATCGAGCAAACCATGGTCAGCAAGCGCTACCGGCGCATCATCg > 2:1433611/1‑150 (MQ=255) tcatcaAAGCCTGGCGCTGGTCGCCCTGCGGGACCCGTATATCCACCTGGTAAACCTTACCGGCGCCGCCGGCTCCGGTAAAACCATCCTGGCACTGGCTGCGGCCATCGAGCAAACCATTGTCAGCAAGCGCTACCGGCGCatcatctc < 2:65268/150‑3 (MQ=255) atcaAAGCCTGGCGCTGTTCGCCCTGCTGGACCCGGATATCCACCTGGTGAACCTGACCGGCGCCGCCGGCTCCGGTAAAACCATCCTGGCACTGGCTGCGGCCATCGAGCAAACCATGGTCAGCAAGCGCTACCg < 1:1029479/136‑1 (MQ=255) atcaAAGCCTGGCGCTGTTCGCCCTGCTGGACCCGGATATCCACCTGGTGAACCTGACCGGCGCCGCCGGCTCCGGTAAAACCATCCTGGCACTGGCTGCGGCCATCGAGCAAACCATGGTCAGCAAGCGCTACCg > 2:1029479/1‑136 (MQ=255) aaGCCTGGCGCTGTTCGCCCTGCTGGACCCGGATATCCACCTGGTGAACCTGACCGGCgccgcc > 1:1675147/1‑64 (MQ=255) aaGCCTGGCGCTGTTCGCCCTGCTGGACCCGGATATCCACCTGGTGAACCTGACCGGCgccgcc < 2:1675147/64‑1 (MQ=255) gCCTGGCGCTGGTCGCCCTGCTGGACCCGGATATCCACCTGGTGAACCTGACCGGCGCCGCCGGCTCCGGTAAAACCATCCTGGCACTGGCTGCGGCCATCGAGCAAACCATGGTCAGCAAGCGCTACCGGCGCATCATCGCCACCCGCa < 2:174100/150‑1 (MQ=255) cTGTTCGCCCTGCTGGACCCGGATATCCACCTGGTGAACCTGACCGGCGCCGCCGGCTCCGGTAAAACCATCCTGGCACTGGCTGCGGCCATCGAGCAAACCATGGTCAGCAAGCGCTACCGGCGCATCATCGCCACCCGCAGCGTGCAg > 1:1047328/1‑150 (MQ=255) cTGTTCGCCCTGCTGGACCCGGATATCCACCTGGTGAACCTGACCGGCGCCGCCGGCTCCGGTAAAACCATCCTGGCACTGGCTGCGGCCATCGAGCAAACCATGGTCAGCAAGCGCTACCGGCGCATCATCGCCACCCGCAGCGTGCAg < 2:670665/150‑1 (MQ=255) ttCGCCCTGCTGGACCCGGATATCCACCTGGTGAACCTGACCGGCGCCGCCGGCTCCGGTAAAACCATCCTGGCACTGGCTGCGGCCATCGAGCAAACCATGGTCAGCAAGCGCTACCGGCGCATCATCGCCACCCGCAGCGTGCAgggg > 2:768903/1‑150 (MQ=255) ttCGCCCTGCTGGACCCGGATATCCACCTGGTGAACCTGACCGGCGCCGCCGGCTCCGGTAAAACCATCCTGGCACTGGCTGCGGCCATCGAGCAAACCATGGTCAGCAAGCGCTACCGGCGCACCATCGCCACCCGCAGCGTGCAgggg > 2:1446634/1‑150 (MQ=255) tCGCCCTGCTGGACCCGGATATCCACCTGGTGAACCTGACCGGCGCCGCCGGCTCCGGTAAAACCATCCTGGCACTGGCTGCGGCCATCGAGCAAACCATGGTCAGCACGCGCTACCGGCGCATCATCGCCACCCGCAGCGTGCAGGGGc < 1:722221/150‑1 (MQ=255) gCCCTGCTGGACCCGGATATCCACCTGGTGAACCTGACCGGCGCCGCCGGCTCCGGTAAAACCATCCTGGCACTGGCTGCGGCCATCGAGCAAACCATGGTCAGCAAGCGCTACCGGCGCATCATCGCCACCCGCAGCGTGCAGGGGCTg > 2:2251915/1‑150 (MQ=255) gCCCTGCTGGACCCGGATATCCACCTGGTGAACCTGACCGGCGCCGCCGGCTCCGGTAAAACCATCCTGGCACTGGCTGCGGCCATCGAGCAAACCATGGTCAGCAAGCGCTACCGGCGCATCATCGCCACCCGCAGCGTGCAGGGGCTg < 1:1227813/150‑1 (MQ=255) gCCCTGCTGGACCCGGATATCCACCTGGTGAACCTGACCGGCGCCGCCGGCTCCGGTAAAACCATCCTGGCACTGGCTGCGGCCATCGAGCAAACCATGGTCAGCAAGCGCTACCGGCGCATCATCGCCACCCGCAGCGTGCAGGGGCTg > 2:35906/1‑150 (MQ=255) cccTGCTGGACCCGGATATCCACCTGGTGAACCTGACCGGCGCCGCCGGCTCCGGTAAAACCATCCTGGCACTGGCTGCGGCCATCGAGCAAACCATGGTCAGCAAGCGCTACCGGCGCATCATCGCCACCCGCAGCGTGCAGGGGCTgg < 1:2316600/150‑1 (MQ=255) gctgGACCCGGATATCCACCTGGTGAACCTGACCGGCGCCGCCGGCTCCGGTAAAACCATCCTGGCACTGGCTGCGGCCATCGAGCAAACCATGGTCAGCAAGCGCTACCGGCGCATCATCGCCACCCGCAGCGTGCAGGGGCTGGATCa < 1:19813/150‑1 (MQ=255) ctgGACCCGGATATCCACCTGGTGAACCTGACCGGCGCCGCCGGCTCCGGTAAAACCATCCTGGCACTGGCTGCGGCCATCGAGCAAACCATGGTCAGCAAGCGCTACCGGCGCATCATCGCCACCCGCAGCGTGCAGGGGCTGGATCAg < 2:841047/150‑1 (MQ=255) cccGGATATCCACCTGGTGAACCTGACCGGCGCCGCCGGCTCCGGTAAAACCATCCTGGCACTGGCTGCGGCCATCGAGCAAACCATGGTCAGCAAGCGCTACCGGCGCATCATCGc > 1:1296384/1‑117 (MQ=255) ccGGATATCCACCTGGTGAACCTGACCGGCGCCGCCGGCTCCGGTAAAACCATCCTGGCACTGGCTGCGGCCATCGAGCAAACCATGGTCAGCAAGCGCTACCGGCGCATCATCGCCACCCGCAGCGTGCAGGGGCTGGATCAGGAGAtt > 1:1555377/1‑150 (MQ=255) cGGATATCCACCTGGTGAACCTGACCGGCGCCGCCGGCTCCGGTAAAACCATCCTGGCACTGGCTGCGGCCATCGAGCAAACCATGGTCAGCAAGCGCTACCGGCGCATCATCGCCAccc > 2:501265/1‑120 (MQ=255) cGGATATCCACCTGGTGAACCTGACCGGCGCCGCCGGCTCCGGTAAAACCATCCTGGCACTGGCTGCGGCCATCGAGCAAACCATGGTCAGCAAGCGCTACCGGCGCATCATCGCCAccc < 1:501265/120‑1 (MQ=255) gATATCCACCTGGTGAACCTGACCGGCGCCGCCGGCTCCGGTAAAACCATCCTGGCACTGGCTGCGGCCATCGAGCAAACCATGGTCAGCAAGCGCTACCGGCGCATCATCGCCACCCGCAGCGTGCAGGGGCTGGATCAGGAGATTGGc < 1:2173883/150‑1 (MQ=255) atatCCACCTGGTGAACCTGACCGGCGCCGCCGGCTCCGGTAAAACCATCCTGGCACTGGCTGCGGCCATCGAGCAAACCATGGTCAGCAAGCGCTACCGGCGCATCATCGCCACCCGCAGCGTGCAGGGGCTGGATCAGGAGATTGGCt < 1:1433611/150‑1 (MQ=255) aCCTGGTGAACCTGACCGGCGCCGCCGGCTCCGGTAAAACCATCCTGGCACTGGCTGCGGCCATCGAGCAAACCATGGTCAGCAAGCGCTACCGGCGCatcatc < 2:1746896/104‑1 (MQ=255) aCCTGGTGAACCTGACCGGCGCCGCCGGCTCCGGTAAAACCATCCTGGCACTGGCTGCGGCCATCGAGCAAACCATGGTCAGCAAGCGCTACCGGCGCatcatc > 1:1746896/1‑104 (MQ=255) aCCTGGTGAACCTGACCGGCGCCGCCGGCTCCGGTAAAACCATCCTGGCACTGGCTGCGGCCATCGAGCAAACCATGGTCAGCAAGCGCTACCGGCGCATCATCGCCACCCGCAGCGTGCAGGGGCTGGATCAGGAGATTGGCTTCCTGc > 1:1049123/1‑150 (MQ=255) aCCTGGTGAACCTGACCGGCGCCGCCGGCTCCGGTAAAACCATCCTGGCACTGGCTGCGGCCATCGAGCAAACCATGGTCAGCAAGCGCTACCGGCGCATCATCGCCACCCGCAGCGTGCAGGGGCTGGATCAGGAGATTGGCTTCCTGc > 1:1554696/1‑150 (MQ=255) ccTGGTGAACCTGACCGGCGCCGCCGGCTCCGGTAAAACCATCCTGGCACTGGCTGCGGCCATCGAGCAAACCATGGTCAGCAAGCGCTACCGGCGCATCATCGCCACCCGCAGCGTGCAGGGGCTGGATCAGGAGATTGGCTTCCTGcc < 2:2151370/150‑1 (MQ=255) cTGGTGAACCTGACCGGCGCCGCCGGCTCCGGTAAAACCATCCTGGCACTGGCTGCGGCCATCGAGCAAACCATGGTCAGCAAGCGCTACCGGCGCATCATCGCCACCCGCAGCGt < 1:1452463/116‑1 (MQ=255) cTGGTGAACCTGACCGGCGCCGCCGGCTCCGGTAAAACCATCCTGGCACTGGCTGCGGCCATCGAGCAAACCATGGTCAGCAAGCGCTACCGGCGCATCATCGCCACCCGCAGCGt > 2:1452463/1‑116 (MQ=255) gTGAACCTGACCGGCGCCGCCGGCTCCGGTAAAACCATCCTGGCACTGGCTGCGGCCATCGAGCAAACCATGGTCAGCAAGCGCTACCGGCGCATCATCGc > 1:1492905/1‑101 (MQ=255) gTGAACCTGACCGGCGCCGCCGGCTCCGGTAAAACCATCCTGGCACTGGCTGCGGCCATCGAGCAAACCATGGTCAGCAAGCGCTACCGGCGCATCATCGCCACCCGCAGCGTGCAGGGGCTGGATCAGGAGATTGGCTTCCTGCCGGGt > 2:109749/1‑150 (MQ=255) gTGAACCTGACCGGCGCCGCCGGCTCCGGTAAAACCATCCTGGCACTGGCTGCGGCCATCGAGCAAACCATGGTCAGCAAGCGCTACCGGCGCATCATCGCCACCCGCAGCGTGCAGGGGCTGGATCAGGAGATTGGCTTCCTGCCGGGt > 2:2004892/1‑150 (MQ=255) aaCCTGACCGGCGCCGCCGGCTCCGGTAAAACCATCCTGGCACTGGCTGCGGCCATCGAGCAAACCATGGTCAGCAAGCGCTACCGGCGCATCATCACCACCCGCAGCGTGCAGGGGCTGGATCAgg > 2:1146570/1‑127 (MQ=255) aaCCTGACCGGCGCCGCCGGCTCCGGTAAAACCATCCTGGCACTGGCTGCGGCCATCGAGCAAACCATGGTCAGCAAGCGCTACCGGCGCATCATCACCACCCGCAGCGTGCAGGGGCTGGATCAgg < 1:1146570/127‑1 (MQ=255) ccTGACCGGCGCCGCCGGCTCCGGTAAAACCATCCTGGCACTGGCTGCGGCCATCGAGCAAACCATGGTCAGCAAGCGCTACCGGCGCATCATCGCCACCCGCAGCGTGCAGGGGCTGGATCAGGAGATTGGCTTCCTGCCgg < 2:2137354/143‑1 (MQ=255) ccTGACCGGCGCCGCCGGCTCCGGTAAAACCATCCTGGCACTGGCTGCGGCCATCGAGCAAACCATGGTCAGCAAGCGCTACCGGCGCATCATCGCCACCCGCAGCGTGCAGGGGCTGGATCAGGAGATTGGCTTCCTGCCgg > 1:2137354/1‑143 (MQ=255) ccTGACCGGCGCCGCCGGCTCCGGTAAAACCATCCTGGCACTGGCTGCGGCCATCGAGCAAACCATGGTCAGCAAGCGCTACCGGCGCATCATCGCCACCCGCAGCGTGCAGGGGCTGGATCAGGAGATTGGCTTCCTGCAGGGTACCGa > 1:355806/1‑150 (MQ=255) tGACCGGCGCCGCCGGCTCCGGTAAAACCATCCTGGCACTGGCTGCGGCCATCGAGCAAACCATGGTCAGCAAGCGCTACCGGCGCATCATCGCCACCCGCAGCGTGCAGGGGCTGGATCAGGAGATTGGCTTCCTGCCGGGTACCGAAg < 1:2004892/150‑1 (MQ=255) aCCGGCGCCGCCGGCTCCGGTAAAACCATCCTGGCACTGGCTGCGGCCATCGAGCAAACCATGGTCAGCAAGCGCTACCGGCGCATCATCGCCACCCGCAGCGTGCAGGGGCTGGATCAGGAGATTGGCTTCCTGCCGGGTACCGAAGCa < 2:1554696/150‑1 (MQ=255) aCCGGAGCCGGCGGCGCCGGTAAAACCATCCTGGCACTGGCTGCGGCCATCGAGCAAACCATGGTCAGCAAgc > 1:57163/1‑73 (MQ=38) ccGGAGCCGGCGGCGCCGGTAAAACCATCCTGGCACTGGCTGCGGCCATCGAGCAAACCATGGTCAGCAAGCGCTACCGGCGCATCATCGCCACCCGCAGCGTGCAGGGGCTGGATCAGGAGATTg < 2:247831/126‑1 (MQ=255) ccGGAGCCGGCGGCGCCGGTAAAACCATCCTGGCACTGGCTGCGGCCATCGAGCAAACCATGGTCAGCAAGCGCTACCGGCGCATCATCGCCACCCGCAGCGTGCAGGGGCTGGATCAGGAGATTg > 1:247831/1‑126 (MQ=255) cGGCGCCGCCGGCTCCGGTAAAACCATCCTGGCACTGGCTGCGGCCATCGAGCAAACCATGGTCAGCAAGCGCTACCGGCGCATCATCGCCACCCGCAGCGTGCAGGGGCTGGATCAGGAGATTGGCTTCCTGCCGGGTACCGAAGCaga > 2:176562/1‑150 (MQ=255) cGGCGCCGCCGGCTCCGGTAAAACCATCCTGGCACTGGCTGCGGCCATCGAGCAAACCATGGTCAGCAAGCGCTACCGGCGCATCATCGCCACCCGCAGCGTGCAGGGGCTGGATCAGGAGATTGGCTTCCTGCCGGGTACCGAAGCaga < 1:2251915/150‑1 (MQ=255) cGGAGCCGGCGGCGCCGGTAAAACCATCCTGGCACTGGCTGCGGCCATCGAGCAAACCATGGTCAGCAAGCGCTACCGGCGCATCATCGCCACCCGCAGAGGTCAGGGGCTGGATCAGGAGATTGGCTTCCTGCCGGGTACCGAAGCaga > 1:1953197/1‑150 (MQ=255) ggCGCCGCCGGCTCCGGTAAAACCATCCTGGCACTGGCTGCGGCCATCGAGCAAACCATGGTCAGCAAGCGCTACCGGCGCATCATCGCCACCCGCAGCGTGCAGGGGCTGGATCAGGAGATTGGCTTCCTGcc > 2:1906518/1‑134 (MQ=255) ggCGCCGCCGGCTCCGGTAAAACCATCCTGGCACTGGCTGCGGCCATCGAGCAAACCATGGTCAGCAAGCGCTACCGGCGCATCATCGCCACCCGCAGCGTGCAGGGGCTGGATCAGGAGATTGGCTTCCTGcc < 1:1906518/134‑1 (MQ=255) ggCGCCGCCGGCTCCGGTAAAACCATCCTGGCACTGGCTGCGGCCATCGAGCAAACCATGGTCAGCAAGCGCTACCGGCGCATCATCGCCACCCGCAGCGTGCAGGGGCTGGATCAGGAGATTGGCTTCCTGCCGGGTACCGAAGCagag > 1:2281775/1‑150 (MQ=255) ggCGCCGCCGGCTCCGGTAAAACCATCCTGGCACTGGCTGCGGCCATCGAGCAAACCATGGTCAGCAAGCGCTACCGGCGCATCATCGCCACCCGCAGCGTGCAGGGGCTGGATCAGGAGATTGGCTTACCGCCGGCTACCGCAgtggcg > 2:1715272/1‑145 (MQ=255) gcgcCGCCGGCTCCGGTAAAACCATCCTGGCACTGGCTGCGGCCATCGAGCAAACCATGGTCAGCAAGCGCTACCGGCGCATCATCGCCACCCGCAGCGTGCAGGGGCTGGATCAGGAGATTGGCTTCCTGCCGGGTACCGAAGCAgaga > 2:670062/1‑150 (MQ=255) | TCGTGACGACGAACTGCTGCTACTCGACCTGCACCAGGAGCCTTTGCTGCACCAGGAAGCCTGGGGCCTGAAACCACGCGACATTCATCAAAGCCTGGCGCTGTTCGCCCTGCTGGACCCGGATATCCACCTGGTGAACCTGACCGGCGCCGCCGGCTCCGGTAAAACCATCCTGGCACTGGCTGCGGCCATCGAGCAAACCATGGTCAGCAAGCGCTACCGGCGCATCATCGCCACCCGCAGCGTGCAGGGGCTGGATCAGGAGATTGGCTTCCTGCCGGGTACCGAAGCAGAGA > NC_002947/1478046‑1478341 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |