| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,485,015 | C→G | 7.1% | I362M (ATC→ATG) | yhdX → | amino acid ABC transporter permease |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,485,015 | 0 | C | G | 7.1% | 338.3 / 12.2 | 109 | I362M (ATC→ATG) | yhdX | amino acid ABC transporter permease |
| Reads supporting (aligned to +/- strand): ref base C (51/49); new base G (5/3); total (57/52) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.18e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 113 total aligned reads displayed.
GCACTGCGGGTGATCATTCCGCCGCTGACCAGCCAGTACCTGAACCTGGCGAAGAACTCTTCGCTGGCGGCCGGTATCGGCTACCCGGAGATGGTCTCGCTGTTCGCCGGTACCGTGCTCAACCAGACCGGCCAGGCCATCGAGGTGATCGCCATCACCATGAGTGTCTATCTCGCCATCAGCATCAGCATTTCGCTGCTGATGAACTGGTACAACAAGCGCATTGCGCTGATCGAGCGGTGAGGATACGCCCGTGAATGCCCATGTTTTCAAACCCGATATGCCGCCACCGGTGAAA > NC_002947/1484866‑1485163 | gCACTGCGGGTGATCATTCCGCCGCTGACCAGCCAGTACCTGAACCTGGCGAAGAACTCTTCGCTGGCGGCCGGTATCGGCTACCCGGAGATGGTCTCGCTGTTCGCCGGTACCGTGCTCAACCAGACCGGCCAGGCCATCGAGGTGATc < 2:1385337/150‑1 (MQ=255)gCACTGCGGGTGATCATTCCGCCGCTGACCAGCCAGTACCTGAACCTGGCGAAGAACTCTTCGCTGGCGGCCGGTATCGGCTACCCGGAGATGGTCTCGCTGTTCGCCGGTACCGTGCTCAACCAGACCGGCCAGGCCATCGAGGTGATc < 2:1779674/150‑1 (MQ=255) aCTGCGGGTGATCATTCCGCCGCTGACCAGCCAGTACCTGAACCTGGCGAAGAACTCTTCGCTGGCGGCCGGTATCGGCTACCCGGAGATGGTCTCGCTGTTCGCCGGTACCGTGCTCAACCAGACCGGCCAGGCCATCGAGGTGATCGc < 2:789803/150‑1 (MQ=255) tGCGGGTGATCATTCCGCCGCTGACCAGCCAGTACCTGAACCTGGCGAAGAACTCTTCGCTGGCGGCCGGTATCGGCTACCCGGAGATGGTCTCGCTGTTCGCCGGTACCGTGCTCAACCAGACCGGCCAGGCCATCGAGGTGATCGCCa < 1:831208/150‑1 (MQ=255) ggTGATCATTCCGCCGCTGACCAGCCAGTACCTGAACCTGGCGAAGAACTCTTCGCTGGCGGCCGGTATCGGCTACCCGGAGATGGTCTCGCTGTTCGCCGGTACCGTGCTCAACCAGACCGGCCAGGCCATCGAGGTGATCGCCATCAc > 1:2278845/1‑150 (MQ=255) gTGATCATTCCGCCGCTGACCAGCCAGTACCTGAACCTGGCGAAGAACTCTTCGCTGGCGGCCGGTATCGGCTACCCGGAGATGGTCTCGCTGTTCGCCGGTACCGTGCTCAACCAGACCGGCCAGGCCATCGAGGTGATCGCCATCAcc > 2:2210727/1‑150 (MQ=255) gTGATCATTCCGCCGCTGACCAGCCAGTACCTGAACCTGGCGAAGAACTCTTCGCTGGCGGCCGGTATCGGCTACCCGGAGATGGTCTCGCTGTTCGCCGGTACCGTGCTCAACCAGACCGGCCAGGCCATCGAGGTGATCGCCATCAcc > 2:282365/1‑150 (MQ=255) tCATTCCGCCGCTGACCAGCCAGTACCTGAACCTGGCGAAGAACTCTTCGCTGGCGGCCGGTATCGGCTACCCGGAGATGGTCTCGCTGTTCGCCGGTACCGTGCTCAACCAGACCGGCCAGGCCATCGAGGTGATCGCCATCACCATGa > 1:1361569/1‑150 (MQ=255) cATTCCGCCGCTAACCAGCCAGTGCCTGAACCTGGCGAAAAACTCTTCGCTGGCGGCCGGTATCGGCGACCCGGAGATGGTCTCGCTGTTCGCCGGTACCGTGCTCAACGAGACCGGCCGGGCCAGCGAGGTGATTGCCATCAACATTAg > 2:2222/1‑150 (MQ=255) ccgccgCTGACCAGCCAGTACCTGAACCTGGCGAAGAACTCTTCGCTGGCGGCCGGTATCGGCTACCCGGAGATGGTCTCGCTGTTCGCCGGTACCGTGCTCAACCAGACCGGCCAGGCCATCGAGGTGATCGCCATCACCATGAGTGTc < 2:2029273/150‑1 (MQ=255) ccccacggACCAGGCAGTACCTGCGCCTTGCGCGGAGCTCTTCGCTCGCGGACAGTATCGGCTACCCCGAGATAGTCTCGCTTTTCGCCGGTACCGTGCTCAACCAGACCGGCCAGGCCATCGAGGTGATCGCCATCACCATGAGTGTCt < 2:1015645/143‑1 (MQ=255) gccgcTGACCAGCCAGTACCTGAACCTGGCGAAGAACTCTTCGCTGGCGGCCGGTATCGGCTACCCGGAGATGGTCTCGCTGTTCGCCGGTACCGTGCTCAACCAGACCGGCCAGGCCATCGAGGTGATCGCCATCACCATGAGTGTCTa > 1:1124444/1‑150 (MQ=255) ccgcTGACCAGCCAGTACCTGAACCTGGCGAAGAACTCTTCGCTGGCGGCCGGTATCGGCTACCCGGAGATGGTCTCGCTGTTCGCCGGTACCGTGCTCAACCAGACCGGCCAGGCCATCGAGGTGATCGCCATCACCATGAGTGTCTAt < 2:1145951/150‑1 (MQ=255) tGACCAGCCAGTACCTGAACCTGGCTAAGAACTCTTCGCTGGCGGCCGGTATCGGCTACCCGGAGATGGTCTCGCTGTTCGCCGGTACCGTGCTCAACCAGACCGGCCAGGCCATCGAGGTGATCGCCATCACCATGAGTGTCTATCTCg < 1:282365/150‑1 (MQ=255) tGACCAGCCAGTACCTGAACCTGGCGAAGAACTCTTCGCTGGCGGCCGGTATCGGCTACCCGGAGATGGTCTCGCTGTTCGCCGGTACCGTGCTCAACCAGACCGGCCAGGCCATCGAGGTGATCGCCATCACCATGAGTGTCTATCTCg < 1:993580/150‑1 (MQ=255) gACCAGCCAGTACCTGAACCTGGCGAAGAACTCTTCGCTGGCGGCCGGTATCGGCTACCCGGAGATGGTCTCGCTGTTCGCCGGTACCGTGCTCAACCAGACCGGCCAGGCCATCGAGGTGATc > 1:878637/1‑124 (MQ=255) gACCAGCCAGTACCTGAACCTGGCGAAGAACTCTTCGCTGGCGGCCGGTATCGGCTACCCGGAGATGGTCTCGCTGTTCGCCGGTACCGTGCTCAACCAGACCGGCCAGGCCATCGAGGTGATc < 2:878637/124‑1 (MQ=255) gACCAGCCAGTACCTGAACCTGGCGAAGAACTCTTCGCTGGCGGCCGGTATCGGCTACCCGGAGATGGTCTCGCTGTTCGCCGGTACCGTGCTCAACCAGACCGGCCAGGCCATCGAGGTGATCGCCATCACCATGAGTGTCTATCTCGc > 1:924187/1‑150 (MQ=255) aCCAGCCAGTACCTGAACCTGGCGAAGAACTCTTCGCTGGCGGCCGGTATCGGCTACCCGGAGATGGTCTCGCTGTTCGCCGGTACCGTGCTCAACCAGACCGGCCAGGCCATCGAGGTGATCGCCATCACCATGAGTGTCTATCTCGcc > 1:72155/1‑150 (MQ=255) cagccagTACCTGAACCTGGCGAAGAACTCTTCGCTGGCGGCCGGTATCGGCTACCCGGAGATGGTCTCGCTGTTCGCCGGTACCGTGCTCAACCAGACCGGCCAGGCCATCGAGGTGATCGCCATCACCa > 1:485151/1‑131 (MQ=255) cagccagTACCTGAACCTGGCGAAGAACTCTTCGCTGGCGGCCGGTATCGGCTACCCGGAGATGGTCTCGCTGTTCGCCGGTACCGTGCTCAACCAGACCGGCCAGGCCATCGAGGTGATCGCCATCACCa < 2:485151/131‑1 (MQ=255) cagccagTACCTGAACCTGGCGAAGAACTCTTCGCTGGCGGCCGGTATCGGCTACCCGGAGATGGTCTCGCTGTTCGCCGGTACCGTGCTCAACCAGACCGGCCAGGCCATCGAGGTGATCGCCATCACCATGAGTGTCTATCTCGCcat > 2:1101342/1‑150 (MQ=255) cagccagTACCTGAACCTGGCGAAGAACTCTTCGCTGGCGGCCGGTATCGGCTACCCGGAGATGGTCTCGCTGTTCGCCGGTACCGTGCTCAACCAGACCGGCCAGGCCATCGAGGTGATCGCCATCACCATGAGTGTCTATCTCGCcat < 2:1198191/150‑1 (MQ=255) cagccagTACCTGAACCTGGCGAAGAACTCTTCGCTGGCGGCCGGTATCGGCTACCCGGAGATGGTCTCGCTATTCGCCGGTACCGTGCTCAACCAGACCGGCCAGGCCATCGAGGTGATCGCCa < 1:1573392/125‑1 (MQ=255) cagccagTACCTGAACCTGGCGAAGAACTCTTCGCTGGCGGCCGGTATCGGCTACCCGGAGATGGTCTCGCTATTCGCCGGTACCGTGCTCAACCAGACCGGCCAGGCCATCGAGGTGATCGCCa > 2:1573392/1‑125 (MQ=255) agTACCTGAACCTGGCGAAGAACTCTTCGCTGGCGGCCGGTATCGGCTACCCGGAGATGGTCTCGCTGTTCGCCGGTACCGTGCTCAACCAGACCGGCCAGGCCATCGAGGTGATCGCCATCACCATGAGTGTCTATCTCGCcatcagca < 2:127369/150‑1 (MQ=255) gTACCTGAACCTGGCGAAGAACTCTTCGCTGGCGGCCGGTATCGGCTACCCGGAGATGGTCTCGCTGTTCGCCGGTACCGTGCTCAACCAGACCGGCCAGGCCATCGAGGTGATCGCCATCACCATGAGTGTCTATCTCGCcatcagcat < 1:852447/150‑1 (MQ=255) aCCTGAACCTGGCGAAGAACTCTTCGCTGGCGGCCGGTATCGGCTACCCGGAGATGGTCTCGCTGTTCACCGGTACCGTGCTCAACCAGACCGGCCAGGCCATCGAGGTGATCGCCATCACCATGAGTGTCTATCTCGCcatcagcatca < 1:643025/150‑1 (MQ=255) ccTGGCGAAGAACTCTTCGCTGGCGGCCGGTATCGGCTACCCGGAGATGGTCTCGCTGTTCGCCGGTACCGTGCTCAACCAGACCGGCCAGGCCATCGAGGTGATCGCCATCACCATGAGTGTCTATCTCGCCATCAGCATCAGCATTTc < 1:1794142/150‑1 (MQ=255) tGGCGAAGAACTCTTCGCTGGCGGCCGGTATCGGCTACCCGGAGATGGTCTCGCTGTTCGCCGGTACCGTGCTCAACCAGACCGGCCAGGCCATCGAGGTGATCGCCATCACCATGAGTGTCTATCTCGCCATCAGCATCAGCATTTCgc > 2:2281447/1‑150 (MQ=255) cagCGAAGAGTTCTTCGCTGGCGGCCGGTATCGGCTACCCGGAGATGGTCTCGCTGTTCGCCGGTACCGTGCTCAACCAGACCGGCCAGGCCATCGAGGTGATCGCCATCACCATGAGTGTCTATCTCGCCATCAGCATCAGCATTTCgc > 2:2368551/3‑150 (MQ=255) cagCGAAGAGTTCTTCGCTGGCGGCCGGTATCGGCTACCCGGAGATGGTCTCGCTGTTCGCCGGTACCGTGCTCAACCAGACCGGCCAGGCCATCGAGGTGATCGCCATCACCATGAGTGTCTATCTCGCCATCAGCATCAACATTTCgc > 2:818807/3‑150 (MQ=255) gaagaaCTCTTCGCTGGCGGCCGGTATCGGCTACCCGGAGATGGTCTCGCTGTTCGCCGGTACCGTGCTCAACCAGACCGGCCAGGCCATCGAGGTGCTCGCCATCACCATGAGTGTCTATCTCGCCATCAGCATCAGCATTTCtctgct > 2:1388584/1‑150 (MQ=255) aagaaCTCTTCGCTGGCGGCCGGTATCGGCTACCCGGAGATGGTCTCGCTGTTCGCCGGTACCGTGCTCAACCAGACCGGCCAGGCCATCGAGGTGATCGCCATCACCATGAGTGTCTATCTCGCCATCAGCATCAGCATTTCGctgctg > 1:1147558/1‑150 (MQ=255) gaaCTCTTCGCTGGCGGCCGGTATCGGCTACCCGGAGATGGTCTCGCTGTTCGCCGGTACCGTGCTCAACCAGACCGGCCAGGCCATCGAGGTGATCGCCATCACCATGAGTGTCTATCTTGCCAGCAGCATCAGCATTTCGCTGCtgat > 2:1598381/1‑150 (MQ=255) gaaCTCTTCGCTGGCGGCCGGTATCGGCTACCCGGAGATGGTCTCGCTGTTCGCCGGTACCGTGCTCAACCAGACCGGCCAGGCCATCGAGGTGATCGCCATCACCATGAGTGTCTATCTCGCCATCAGCATCAGCATTTCgccgcttgt < 2:2278845/150‑4 (MQ=255) tctTCGCTGGCGGCCGGTATCGGCTACCCTTAGATGGTCTCGCTCTTCGCCGGTACCGTGCTCAACCAGACCGGCCAGGCCATCGAGGTGATCGCCATCACCATGAGTTTCTATCTCGCCATCAGCATCAGCATTTCGCTGCTGATGAAc < 1:375794/150‑1 (MQ=255) ttCGCTGGCGGCCGGTATCGGCTACCCGGAGATGGTCTCGCTGTTCGCCGGTACCGTGCTCAACCAGACCGGCCAGGCCATCGAGGTGATCGCCATCACCATGAGTGTCTATCTCGCCATCAGCATCAGCATTTCGCTGCTGATGAACTg > 1:2123279/1‑150 (MQ=255) ttCGCTGGCGGCCGGTATCGGCTACCCGGAGATGGTCTCGCTGTTCGCCGGTACCGTGCTCAACCAGACCGGCCAGGCCATCGAGGTGATCGCCATCACCATGAGTGTCTATCTCGCCATCAGCATCAGCATTTCGCTGCTGATGAACTg < 1:174088/150‑1 (MQ=255) ttCGCTGGCGGCCGGTATCGGCTACCCGGAGATGGTCTCGCTGTTCGCCGGTACCGTGCTCAACAAGCCCGGCCAGGCCATCGAGGTGATCGCCATCACCATGAGTGCCTACACCAGGATCAGCATCAGCATTTCGCTGCTGATGAACTg < 1:1999467/150‑1 (MQ=255) cTGGCGGCCGGTATCGGCTACCCGGAGATGGTCTCGCTGTTCGCCGGTACCGTGCTCAACCAGACCGGCCAGGCCATCGAGGTGATCGCCATCACCATGAGTGTCTATCTCGCCATCAGCATCAGCATTTCGCTGCTGATGAACTGGTac < 2:2135953/150‑1 (MQ=255) ggcggcCGGTATCGGCTACCCGGAGATGGTCTCGCTAAAATCCGGTACCGTGCTCAACCAGACCGGCCAGGCCATCGAGGTGATCGCCATCACCATGAGTGTCTATCTCGCCATCAGCATCAGCATTTCGCTGCTGATGAACTGGTacaa < 1:1833507/150‑1 (MQ=255) ggcCGGTATCGGCTACCCGGAGATGGTCTCGCTGTTCGCCGGTACCGTGCTCAACCAGACCGGCCAGGCCATCGAGGTGATCGCCATCACCATGAGTGTCTATCTCGCCATCAGCATCAGCATTTCGCTGCTGATGAACTGGTAcaacaa > 2:294707/1‑150 (MQ=255) gcCGGTATCGGCTACCCGGAGATGGTCTCGCTGTTCGCCGGTACCGTGCTCAACCAGACCGGCCAGGCCATCGAGGTGATCGCCATCACCATGAGTGTCTATCTCGCCATCAGCATCAGCATTTCGCTGCTGATGAACTGGTACAACAAg < 2:2123279/150‑1 (MQ=255) gTATCGGCTACCCGGAGATGGTCTCGCTGTTCGCCGGTACCGTGCTCCACCAGACCGGCCAGGCCATCGAGGTGATCGCCATCACCCTGAGTGTCTATCTCGCCATCAGCATCAGCATGTCGCTGCTGATGAACTGGTACAACAAGCGCa < 1:49481/150‑1 (MQ=255) aCCCGGAGATGGTCTCGCTGTTCGCCGGTACCGTGCTCAACCAGACCGGCCAGGCCATCGAGGTGATCGCCATCACCATGAGTGTCTATCTCGCCATCAGCATCAGCATTTCGCTGCTGATGAACTGGTACAACAAGCGCATTGCGCTGa < 1:895991/150‑1 (MQ=255) ccGGAGATGGTCTCGCTGTTCGCCGGTACCGTGCTCAACCAGACCGGCCAGGCCATCGAGGTGATCGCCATCACCATGAGTGTCTa < 2:1708430/86‑1 (MQ=255) ccGGAGATGGTCTCGCTGTTCGCCGGTACCGTGCTCAACCAGACCGGCCAGGCCATCGAGGTGATCGCCATCACCATGAGTGTCTa > 1:1708430/1‑86 (MQ=255) ccGGAGATGGTCTCGCTGTTCGCCGGTACCGTGCTCAACCAGACCGGCCAGGCCATCGAGGTGATCGCCATCACCATGAGTGTCTATCTCGCCATCAGCATCAGCATTTCGCTGCTGATGAACTGGTACAACAAGCGCATTGCGCTGATc > 2:1590394/1‑150 (MQ=255) cGGAGATGGTCTCGCTGTTCGCCGGTACCGTGCTCAACCAGACCGGCCAGGCCATCGAGGTGATCGCCATCACCATGAGTGTCTATCTCGCCATCAGCATCAGCATTTCGCTGCTGATGAACTGGTACAACAAGCGCAATGCGCttgttg < 1:2125460/150‑6 (MQ=255) ggAGATGGTCTCGCTGTTCGCCGGTACCGTGCTCAACCAGACCGGCCAGGCCATCGAGGTGATCGCCATCACCATGAGTGTCTATCTCGCCATCAGCATCAGCATTTCGCTGCTGATGAACTGGTACAACAAGCGCATTGCGCTGATCGa > 2:2204243/1‑150 (MQ=255) gTCTCGCTGTTCGCCGGTACCGTGCTCAACCAGACCGGCCAGGCCATCGAGGTGATCGCCATCACCATGAGTGTCTATCTCGCCATCAGCATCAGCATTTCGCTGCTGATGAACTGGTACAACAAGCGCATTGCGCTGATCGAGCGGTGa < 1:2368551/150‑1 (MQ=255) gTCTAGCTGTTCGCCGGCACAGTGCTCAACCAGACCGGCCAGGCCATCGAGGTGATCGCCATCACCATGAGTGTCTATCTCGCCATCAGCATCAGCATTTCGCTGCTGATGAACTGGTACAACAAGCGCATTGCGCTGATCGAGCGGTGa < 2:1124444/150‑1 (MQ=255) tctcGCTGTTCGCCGGTACCGTGCTCAACCAGACCGGCCAGGCCATCGAGGTGATCGCCATCACCATGAGTGTCTATCTCGCCATCAGCATCAGCATTTCGCTGCTGATGAACTGGTACAACAAgc > 1:1215850/1‑126 (MQ=255) tctcGCTGTTCGCCGGTACCGTGCTCAACCAGACCGGCCAGGCCATCGAGGTGATCGCCATCACCATGAGTGTCTATCTCGCCATCAGCATCAGCATTTCGCTGCTGATGAACTGGTACAACAAgc < 2:1215850/126‑1 (MQ=255) tctcGCTGTTCGCCGGTACCGTGCTCAACCAGACCGGCCAGGCCATCGAGGTGATCGCCATCACCATGAGTGTCTATCTCGCCATCAGCATCAGCATTTCGCTGCTGATGAACTGGTACAACAAGCGCATTGCGCTGATCGAGCGGTGAg > 2:231440/1‑150 (MQ=255) tctcGCTGTTCGCCGGTACCGTGCTCAACCAGACCGGCCAGGCCATCGAGGTGATCGCCATCACCATGAGTGTCTATCTCGCCATCAGCATCAGCATTTCGCTGCTGATGAACTGGTACAACAAGCGCATTGCGCTGATCGAGCGGTGAg < 2:72155/150‑1 (MQ=255) tcGCTGTTCGCCGGTACCGTGCTCAACCAGACCGGCCAGGCCATCGAGGTGATCGCCATCACCATGAGTGTCTATCTCGCCATCAGCATCAGCATTTCGCTGCTGATGAACTGGTACAACAAGCGCATTGCGCTGATCGAGCGGTGAGGa > 1:2226493/1‑150 (MQ=255) tcGCTGTTCGCCGGTACCGTGCTCAACCAGACCGGCCAGGCCATCGAGGTGATCGCCATCACCATGAGTGTCTATCTCGCCATCAGCATCAGCATTTCGCTGCTGATGAACTGGTACAACAAGCGCATTGCGCTGATCGAGCGGTGAGGa > 1:589851/1‑150 (MQ=255) gCCGGTACCGTGCTCAACCAGACCGGCCAGGCCATCGAGGTGATCGCCATCACCATGAGTGTCTATCTCGCCATCAGCATCAGCATTTCGCTGCTGATGAACTGGTACAACAAGCGCATTGCGCTGATCGAGCGGTGAGGATACGc < 2:1460227/146‑1 (MQ=255) gCCGGTACCGTGCTCAACCAGACCGGCCAGGCCATCGAGGTGATCGCCATCACCATGAGTGTCTATCTCGCCATCAGCATCAGCATTTCGCTGCTGATGAACTGGTACAACAAGCGCATTGCGCTGATCGAGCGGTGAGGATACGc > 1:1460227/1‑146 (MQ=255) gCCGGTACCGTGCTCAACCAGACCGGCCAGGCCATCGAGGTGATCGCCATCACCATGAGTGTCTATCTCGCCATCAGCATCAGCATTTCGCTGCTGATGAACTGGTACAACAAGCGCATTGCGCTGATCGAGCGGTGAGGATACGCCCGt < 2:210224/150‑1 (MQ=255) cGTGCTCAACCAGACCGGCCAGGCCATCGAGGTGATCGCCATCACCATGAGTGTCTATCTCGCcatca > 1:1925490/1‑68 (MQ=255) cGTGCTCAACCAGACCGGCCAGGCCATCGAGGTGATCGCCATCACCATGAGTGTCTATCTCGCcatca < 2:1925490/68‑1 (MQ=255) cGTGCTCAACCAGACCGGCCAGGCCATCGAGGTGATCGCCATCACCATGAGTGTCTATCTCGCCATCAGCATCAGCATTTCGCTGCTGATGAACTGGTACAACAAGCGCATTGCGCTGATCGAGCGGTGAGGATACGCCCGTGAATGccc > 2:1499745/1‑150 (MQ=255) cTCAACCAGACCGGCCAGGCCATCGAGGTGATCGCCATCACCATGAGTGTCt < 2:196727/52‑1 (MQ=255) cTCAACCAGACCGGCCAGGCCATCGAGGTGATCGCCATCACCATGAGTGTCt > 1:196727/1‑52 (MQ=255) tCAACCAGACCGGCCAGGCCATCGAGGTGATCGCCATCACCATGAGTGTCTATCTCGCCATCAGCATCAGCATTTCGCTGCTGATGAACTGGTACAACAAGCGCATTGCGCTGATCGAGCGGTGAGGATACGCCCGTGAATGCCCATGtt > 1:374782/1‑150 (MQ=255) tCAACCAGACCGGCCAGGCCATCGAGGTGATCGCCATCACCATGAGTGTCTATCTCGCCATCAGCATCAGCATTTCGCTGCTGATGAACTGGTACAACAAGCGCATTGCGCTGATCGAGAGGTGATGATACGCCCGTGAATGCCCATGtt > 1:1812229/1‑150 (MQ=255) aaCCAGACCGGCCAGGCCATCGAGGTGATCGCCATCACCATGAGTGTCTATCTCGCCATCAGCATCAGCATTTCGCTGCTGATGAACTGGTAcaacaa > 1:1694639/1‑98 (MQ=255) aaCCAGACCGGCCAGGCCATCGAGGTGATCGCCATCACCATGAGTGTCTATCTCGCCATCAGCATCAGCATTTCGCTGCTGATGAACTGGTACAACAAGCGCATTGCGCTGATCGAGCGGTGAGGATACGCCCGTGAATGCCCATGtttt > 1:42997/1‑150 (MQ=255) aaCCAGACCGGCCAGGCCATCGAGGTGATCGCCATCACCATGAGTGTCTATCTCGCCATCAGCATCAGCATTTCGCTGCTGATGAACTGGTACAACAAGCGCATTGCGCTGATCGAGCGGTGAGGATACGCCCGTGAATGCCCATGtttt > 2:300596/1‑150 (MQ=255) aCCAGACCGGCCAGGCCATCGAGGTGATCGCCATCACCATGAGTGTCTATCTCGCCATCAGCATCAGCATTTCGCTGCTGATGAACTGGTACAACAAGCGCATTGCGCTGATCGAGCGGTGa < 1:2036310/122‑1 (MQ=255) aCCAGACCGGCCAGGCCATCGAGGTGATCGCCATCACCATGAGTGTCTATCTCGCCATCAGCATCAGCATTTCGCTGCTGATGAACTGGTACAACAAGCGCATTGCGCTGATCGAGCGGTGa > 2:2036310/1‑122 (MQ=255) aCCAGACCGGCCAGGCCATCGAGGTGATCGCCATCACCATGAGTGTCTATCTCGCCATCAGCATCAGCATTTCGCTGCTGATGAACTGGTACAACAAGCGCATTGCGCTGATCGAGCGGTGAGGATACGCCCGTGAATGCCCATGTTTTc < 2:1822791/150‑1 (MQ=255) aCCAGACCGGCCAGGCCATCGAGGTGATCGCCATCACCATGAGTGTCTATCTCGCCATCAGCATCAGCATTTCGCTGCTGATGAACTGGTACAACAAGCGCATTGCGCTGATCGAGCGGTGAGGATACGCCCGTGAATGCCCATGTTTTc < 2:374782/150‑1 (MQ=255) ccAGACCGGCCAGGCCATCGAGGTGATCGCCATCACCATGAGTGTCTAt < 2:41608/49‑1 (MQ=255) aGACCGGCCAGGCCATCGAGGTGATCGCCATCACCATGAGTGTCTATCTCGCCATCAGCATCAGCATTTCGCTGCTGATGAACTGGTAcaacaa > 2:6689/1‑94 (MQ=255) aGACCGGCCAGGCCATCGAGGTGATCGCCATCACCATGAGTGTCTATCTCGCCATCAGCATCAGCATTTCGCTGCTGATGAACTGGTAcaacaa < 1:6689/94‑1 (MQ=255) aGACCGGCCAGGCCATCGAGGTGATCGCCATCACCATGAGTGTCTATCTCGCCATCAGCATCAGCATTTCGCTGCTGATGAACTGGTACAACAAGCGCATTGCGCTGATCGAGCGGTGAGGATACGCCCGt < 1:2370880/131‑1 (MQ=255) gACCGGCCAGGCCATCGAGGTGATCGCCATCACCATGAGTGTCTATCTCGCCATCAGCATCAGCATTTCGCTGCTGATGAAATGTTACAACAAGCGCATTTCGCTGATCGAGCGGTGAGGATACGCCAGTGAATGACCATGTTTTCAAAc > 1:1978081/1‑150 (MQ=255) aCCGGCCAGGCCATCGAGGTGATCGCCATCACCATGAGTGTCTATCTCGCCATCAGCATCAGCATTTCGCTGCTGATGAACTGGTACAACAAGCGCATTGCGCTGATCGAGCGGTGAGGATACGCCCGTGAATGCCCATGTTTTCAAAc < 2:716818/149‑1 (MQ=255) ggccaTCGAGGTGATCGCCATCACCATGAGTGTCTATCTCGCCATCAGCATCAGCATTTCGCTGCTGATGAACTGGTACAACAAGCGCATTGCGCTGATCGAGCGGTGAg > 1:505929/1‑110 (MQ=255) ggccaTCGAGGTGATCGCCATCACCATGAGTGTCTATCTCGCCATCAGCATCAGCATTTCGCTGCTGATGAACTGGTACAACAAGCGCATTGCGCTGATCGAGCGGTGAGGATACGCCCGTGAATGCCCATGTTTTCAAACCCGATATgc > 1:50386/1‑150 (MQ=255) aTCGAGGTGATCGCCATCACCATGAGTGTCTATCTCGCCATCAGCATCAGCATTTCGCTGCTGATGAACTGGTACAACAAGCGCATTGCGCTGATCGAGCGGTGAGGATACGCCCGTGAATGGCCATGTTTTCAAACCCGGTATgccgcc > 2:471154/1‑150 (MQ=255) aTCGAGGTGATCGCCATCACCATGAGTGTCTATCTCGCCATCAGCATCAGCATTTCGCTGCTGATGAACTGGTACAACAAGCGCATTGCGCTGATCGAGCGGTGAGGATACGCCCGTGAATGCCCATGTTTTCAAACCCGATATgccgcc > 1:114639/1‑150 (MQ=255) aTCGAGGTGATCGCCATCACCATGAGTGTCTATCTCGACATCAGCATCAGCATTTCGCTGCTGATGAACTGGTACAACAAGCGCATTGCGCTGATCGAGCGGTGAGGATACGCCCGTGAATGCCAATGTTTTCACACCCGATATgccgcc > 2:1076216/1‑150 (MQ=255) tcatggTGATGGCGATCACCATGAGTGTCTATCTCGCCATCAGCATCAGCATTTCGCTGCTGATGAACTGGTACAACAAGCGCATTGCGCTGATCGAGc < 2:1926953/95‑1 (MQ=255) tcatggTGATGGCGATCACCATGAGTGTCTATCTCGCCATCAGCATCAGCATTTCGCTGCTGATGAACTGGTACAACAAGCGCATTGCGCTGATCGAGCGGTGAGGATACGCCCGTGAATTCCCATGTTTTCaa < 2:2088442/130‑1 (MQ=255) tcatggTGATGGCGATCACCATGAGTGTCTATCTCGCCATCAGCATCAGCATTTCGCTGCTGATGAACTGGTACAACAAGCGCATTGCGCTGATCGAGCGGTGAGGATACGCCCGTGAATGCCCATGTTTTCaa > 2:2038760/5‑134 (MQ=255) tcatggTGATGGCGATCACCATGAGTGTCTATCTCGCCATCAGCATCAGCATTTCGCTGCTGATGAACTGGTACAACAAGCGCATTGCGCTGATCGAGCGGTGAGGATACGCCCGTGAATGCCCATGTTTTCaa > 1:2088442/5‑134 (MQ=255) tcatggTGATGGCGATCACCATGAGTGTCTATCTCGCCATCAGCATCAGCATTTCGCTGCTGATGAACTGGTACAACAAGCGCATTGCGCTGATCGAGCGGTGAGGATACGCCCGTGAATGCCCATGTTTTCaa < 1:2038760/130‑1 (MQ=255) tCGAGGTGATCGCCATCACCATGAGTGTCTATCTCGCCATCAGCATCAGCATTTCGCTGCTGATGAACTGGTACAACAAGCGCATTGCGCTGATCGAGCGGTGAGGATACGCCCGTGAATGCCCATGTTTTCAAACCCGATATgccgccg > 1:1153213/1‑149 (MQ=255) catggTGATGGCGATCACCATGAGTGTCTATCTCGCCATCAGCATCAGCATTTCGCTGCTGATGAACTGGTACAACAAGCGCATTGCGCTGATCGAGCGGTGAGGATACGCCCGTGAATGCCCATGTTTTCAAACCCGATATGCCGCCAc > 2:2012010/4‑150 (MQ=255) atggTGATGGCGATCACCATGAGTGTCTATCTCGCCATCAGCATCAGCATTTCGCTGCTGATGAACTGGTACAACAAGCGCATTGCGCTGATCGAGCGGTGAGGATACGCCCGTGAATGCCCATGTTTTCAAACCCGATATGCCGCCAcc > 2:1382624/3‑150 (MQ=255) gggTGATCGCCATCACCATGAGTGTCTATCTCGCCATCAGCATCAGCATTTCGCTGCTGATGAACTGGTACAACAAGCGCATTGCGCTGATCGAGCGGTGAGGATACGCCCGTGAATGCCCATGTTTTCAAACCCGATATGCCGCCACCg < 2:1894751/149‑1 (MQ=255) ggTGATCGCCATCACCATGAGTGTCTATCTCGCCATCAGCATCAGCATTTCGCTGCTGATGAACTGGTACAACAAGCGCATTGCGCTGATCGAGCGGTGAGGATACGCCCGTGAATGccc < 1:1803725/120‑1 (MQ=255) ggTGATCGCCATCACCATGAGTGTCTATCTCGCCATCAGCATCAGCATTTCGCTGCTGATGAACTGGTACAACAAGCGCATTGCGCTGATCGAGCGGTGAGGATACGCCCGTGAATGccc > 2:1803725/1‑120 (MQ=255) gATCGCCATCACCATGAGTGTCTATCTCGCCATCAGCATCAGCATTTCGCTGCTGATGAACTGGTACAACAAGCGCATTGCGCTGATCGAGCGGTGAGGATACGCCCGTGAATGCCCATGTTTTCAAACCCGATATGCCGCCACCGGTGa > 2:266944/1‑150 (MQ=255) tCGCCATCACCATGAGTGTCTATCTCGCCATCAGCATCAGCATTTCGCTGCTGATGAACTGGTACAACAAGCGCATTGCGCTGATCGAGCGGTGAGGATACGCCCGTGAATGCCCATGTTTTCAAACCCGATATGCCGCCACCGGTGaaa > 2:591777/1‑150 (MQ=255) | GCACTGCGGGTGATCATTCCGCCGCTGACCAGCCAGTACCTGAACCTGGCGAAGAACTCTTCGCTGGCGGCCGGTATCGGCTACCCGGAGATGGTCTCGCTGTTCGCCGGTACCGTGCTCAACCAGACCGGCCAGGCCATCGAGGTGATCGCCATCACCATGAGTGTCTATCTCGCCATCAGCATCAGCATTTCGCTGCTGATGAACTGGTACAACAAGCGCATTGCGCTGATCGAGCGGTGAGGATACGCCCGTGAATGCCCATGTTTTCAAACCCGATATGCCGCCACCGGTGAAA > NC_002947/1484866‑1485163 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |