Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 1,497,846 C→A 6.0% L143M (CTG→ATG)  PP_1310 → hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029471,497,8460CA 6.0% 284.1 / 4.3 93L143M (CTG→ATG) PP_1310hypothetical protein
Reads supporting (aligned to +/- strand):  ref base C (47/38);  new base A (3/3);  total (51/42)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

GGCTGCGTGCCAGGCACCCCGGGCTACCGCTGGTGCTGATGGGCTTTTCGTTCGGTGGTTTCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCG‑AATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGATGAAGTCGTCGCGCCGCAGCTGGTTTACGAATGGTCCGACAGCCTGTCGCGT‑CCCCATGAGCTGCTGAAAGTGGCAGAATGCGGAC  >  NC_002947/1497700‑1497993
                                                                                                                                                  |                                                                                                                                                     
ggCTGCGTGCCAGGCACCCCGGGCTACCGCTGGTGCTGATGGGCTTTTCGTTCGGTGGTTTCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTGGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGa                                                                                                                                                    <  2:324615/150‑1 (MQ=255)
   tGCGTGCCAGGCACCCCGGGCTACCGCTGGTGCTGATGGGCTTTTCGTTCGGTGGTTTCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCAGGCGCATGAccg                                                                                                                                                 >  1:107110/1‑150 (MQ=255)
      gTGCCAGGCACCCCGGGCTACCGCTGGTGCTGATGGGCTTTTCGTTCGGTGGTTTCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCAGGCGCATGAccgccg                                                                                                                                              <  2:1368450/150‑1 (MQ=255)
      gTGCAAGGCACCCCGGGCTACCGCTGGTGCTGATGGGCTTTTCGTTCGGTGGTTTCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCAGGCGCATGAccgccg                                                                                                                                              <  2:1266696/150‑1 (MQ=255)
       tGCCAGGCACCCCGGGCTACCGCTGGTGCTGATGGGCTTTTCGTTCGGTGGTTTCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCAGGCGCATGAccgccgg                                                                                                                                             <  1:1763856/150‑2 (MQ=255)
                ccccGGGCTACCGCTGGTGCTGATGGGCTTTTCGTTCGGTGGTTTCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCG‑AATTCCCGAt                                                                                                                                   >  2:1113608/1‑150 (MQ=255)
                 cccGGGCTACCGCTGGTGCTGATGGGCTTTTCGTTCGGTGGTTTCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCG‑AATTCCCGATg                                                                                                                                  >  2:2164653/1‑150 (MQ=255)
                  ccGGGCTACCGCTGGTGCTGATGGGCTTTTCGTTCGGTGGTTTCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCG‑AATTCCCGATGc                                                                                                                                 <  1:1690585/150‑1 (MQ=255)
                       cTACCGCTGGTGCTGATGGGCTTTTCGTTCGGTGGTTTCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCG‑AATTCCCGATGCCGCAg                                                                                                                            <  1:1690079/150‑1 (MQ=255)
                        tACCGCTGGTGCTGATGGGCTTTTCGTTCGGTGGTTTCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCG‑AATTCCCGATGCCGCAgc                                                                                                                           >  2:907590/1‑150 (MQ=255)
                            gCTGGTGCTGATGGGCTTTTCGTTCGGTGGTTTCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCTTGACCGCCG‑AATTCCCGATGCCGCAGCGCTg                                                                                                                       >  1:2187566/1‑150 (MQ=255)
                            gCTGGTGCTGATGGGCTTTTCGTTCGGTGGTTTCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCG‑AATTCCCGATGCCGCAGCGCTg                                                                                                                       >  2:175116/1‑150 (MQ=255)
                              tGGTGCTGATGGGCTTTTCGTTCGGTGGTTTCGTTGCCACCAGCCTGGACGCGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCG‑AATTCCCGATGCCGCAGCGCTGcc                                                                                                                     >  1:174322/1‑150 (MQ=255)
                                 tGCTGATGGGCTTTTCGTTCGGTGGTTTCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCG‑AATTCCCGATGCCGCAGCGCTGCCCGc                                                                                                                  >  1:1920833/1‑150 (MQ=255)
                                  gCTGATGGGCTTTTCGTTCGGTGGTTTCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCG‑AATTCCCGATGCCGCAGCGCTGCCCGCt                                                                                                                 <  1:1113608/150‑1 (MQ=255)
                                    tGATGGGCTTTTTTTTCGGGGGTTTCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCG‑AATTCCCGATGCCGCAGCGCTGCCCGCTcc                                                                                                               >  2:704719/1‑149 (MQ=255)
                                      aTGGGCTTTTCGTTCGGTGGTTTCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCG‑AATTCCCGATGCCGCAGCGCTGCCCGCTCAcc                                                                                                             >  1:672466/1‑150 (MQ=255)
                                         ggCTTTTCGTTCGGTGGTTTCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCG‑AATTCCCGATGCCGCAGCGCTGCCCGCTCACCgtg                                                                                                          <  2:248017/150‑1 (MQ=255)
                                          gCTTTTCGTTCGGTGGTTTCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACGGCCG‑AATTCCCAAGAGGGCAGCGCTGCCCGCTCACCgtgg                                                                                                         >  1:611828/1‑150 (MQ=255)
                                          gCTTTTCGTTCGGTGGTTTCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCG‑AATTCCCGATGCCGCAGCGCTGCCCGCTCACCgtgg                                                                                                         <  2:1065589/150‑1 (MQ=255)
                                           cTTTTCGTTCGGTGGTTTCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCG‑AATTCCCGATGCCGCAGCGCTGCCCGCTCACCgtggt                                                                                                        >  2:2213243/1‑150 (MQ=255)
                                                 gttcgGTGGTTTCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCG‑AATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGcc                                                                                                  >  1:1539260/1‑150 (MQ=255)
                                                  ttcgGTGGTTTCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCG‑AATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGGCg                                                                                                 >  1:223321/1‑150 (MQ=255)
                                                  ttcgGTGGTTTCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCG‑AATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCg                                                                                                 <  1:632354/150‑1 (MQ=255)
                                                       tggtTTCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCG‑AATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGc                                                                                            >  2:1307670/1‑150 (MQ=255)
                                                          tttCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCTTGACCGCCG‑AATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGa                                                                                         <  2:2187566/150‑1 (MQ=255)
                                                          tttCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCG‑AATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGa                                                                                         >  2:1630737/1‑150 (MQ=255)
                                                           ttCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCG‑AATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGAt                                                                                        <  2:567560/150‑1 (MQ=255)
                                                           ttCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCG‑AATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGAt                                                                                        <  2:1920833/150‑1 (MQ=255)
                                                           ttCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTCGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCG‑AATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGAt                                                                                        <  1:1443835/150‑1 (MQ=255)
                                                              gTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCG‑AATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGATGaa                                                                                     >  1:987253/1‑150 (MQ=255)
                                                               tttccaccaGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCG‑AATTCCCGATGCCGCAGCGCTGCTCGCTCACCGTGATGCAGCCGGACGCCCATGCAg                                                                                    >  2:1046579/4‑150 (MQ=255)
                                                               ttGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCGCACTTGGCG‑TACCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGATGAAg                                                                                    >  2:1269791/1‑150 (MQ=255)
                                                               ttGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCG‑AATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGATGAAg                                                                                    <  1:173969/150‑1 (MQ=255)
                                                               ttGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCG‑AATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGATGAAg                                                                                    >  2:208649/1‑150 (MQ=255)
                                                               ttGCCAACAACCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCG‑AATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGATGAAg                                                                                    >  2:833909/1‑150 (MQ=255)
                                                                   caccaGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCG‑AATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGATGAAgtcgt                                                                                >  1:753097/1‑150 (MQ=255)
                                                                    accaGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCG‑AATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGATGAAgtcgtc                                                                               >  2:2381330/1‑150 (MQ=255)
                                                                    accaGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAATTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCG‑AATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGATGAAgtcgtc                                                                               >  1:1066541/1‑150 (MQ=255)
                                                                         ccTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCG‑AATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGATGAAGTCGTCGcgcc                                                                          <  1:1064939/150‑1 (MQ=255)
                                                                                gggCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCG‑AATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGATGAAGTCGTCGCGCCGCAGCTg                                                                   <  2:987253/150‑1 (MQ=255)
                                                                                    gcCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCG‑AATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGATGAAGTCGTCGCGCCGCAGCTGGttt                                                               <  2:223321/150‑1 (MQ=255)
                                                                                      cTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCG‑AATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGATGAAGTCGTCGCGCCGCAGCTGGTTTaa                                                             >  2:1081619/1‑149 (MQ=255)
                                                                                      cTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCG‑AATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGATGAAGTCGTCGCGCCGCAGCTGGTTTAc                                                             >  2:2256235/1‑150 (MQ=255)
                                                                                      cTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCG‑AATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGATGAAGTCGTCGCGCCGCAGCTGGTTTAc                                                             >  2:167772/1‑150 (MQ=255)
                                                                                      cTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCG‑AATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGATGAAGTCGTCGCGCCGCAGCTGGTTTAc                                                             >  1:868342/1‑150 (MQ=255)
                                                                                          aaaCTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCG‑AATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGATGAAGTCGTCGCGCCGCAGCTGGTTTACGAAt                                                         >  1:1477522/1‑150 (MQ=255)
                                                                                          aaaCTGCAGGCGGCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCG‑AATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGATGAAGTCGTCGCGCCGCAGCTGGTTTACGAAt                                                         <  2:1018259/150‑1 (MQ=255)
                                                                                              tGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCG‑AATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGATGAAGTCGTCGCGCCGCAGCTGGTTTACGAATGGTc                                                     <  1:175116/150‑1 (MQ=255)
                                                                                                 aGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCG‑AATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACACCGATGAAGTCGTCGCGCCGCAGCTGGTTTACGAATGGTCCGa                                                  >  1:1139738/1‑150 (MQ=255)
                                                                                                   gCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCG‑AATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGATGAAGTCGTCGCGCCGCAGCTGGTTTACGAATGGTCCGACa                                                <  1:208649/150‑1 (MQ=255)
                                                                                                      tCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCG‑AATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGATGAAGTCGTCGCGCCGCAGCTGGTTTACGAAt                                                         <  2:1361389/138‑1 (MQ=255)
                                                                                                      tCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCG‑AATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGATGAAGTCGTCGCGCCGCAGCTGGTTTACGAAt                                                         >  1:1361389/1‑138 (MQ=255)
                                                                                                        gAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCG‑AATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGATGAAGTCGTCGCGCCGCAGCTGGTTTACGAATGGTCCGACAGCCTg                                           <  1:833909/150‑1 (MQ=255)
                                                                                                          gTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCG‑AATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGATGAAGTCGTCGCGCCGCAGCTGGTTTACGAATGGTCCGACAGCCTGTc                                         <  1:2164653/150‑1 (MQ=255)
                                                                                                          gTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCG‑AATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGATGAAGTCGTCGCGCCGCAGCTGGTTTACGAATGGTCCGACAGCCTGTc                                         <  1:1307670/150‑1 (MQ=255)
                                                                                                          gTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCG‑AATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGATGAAGTCGTCGCGCCGCAGCTGGTTTACGAATGGTCCGACAGCCTGTc                                         <  1:1129770/150‑1 (MQ=255)
                                                                                                            tGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCG‑AATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGATGAAGTCGTCGCGCCGCAGCTGGTTTACGAATGGTCCGACAGCCTGTcgc                                       <  1:167772/150‑1 (MQ=255)
                                                                                                             gcagcaCCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCG‑AATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGATGAAGTCGTCGCGCCGCAGCTGGTTTACGAATGGTCCGACAGCCTGTcgcg                                      >  2:460024/1‑150 (MQ=255)
                                                                                                                   ccTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCG‑AATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGATGAAGTCGTCGCGCCGCAGCTGGTTTACGAATGGTCCGACAGCCTGTCGCGT‑CCCCa                               >  1:2138642/1‑150 (MQ=255)
                                                                                                                    cTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCG‑AATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGATGAAGTCGTCGCGCCGCAGCTGGTTTACGAATGGTCCGACAg                                               <  2:679838/134‑1 (MQ=255)
                                                                                                                    cTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCG‑AATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGATGAAGTCGTCGCGCCGCAGCTGGTTTACGAATGGTCCGACAg                                               >  1:679838/1‑134 (MQ=255)
                                                                                                                      gTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCG‑AATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGATGAAGTCGTCGCGCCGCAGCTGGTTTACGAATGGTCCGACAGCCTGt                                          >  1:1408626/1‑137 (MQ=255)
                                                                                                                      gTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCG‑AATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGATGAAGTCGTCGCGCCGCAGCTGGTTTACGAATGGTCCGACAGCCTGt                                          <  2:1408626/137‑1 (MQ=255)
                                                                                                                       ttCATGATCGCCCCGGCGGTCATGCGCATGACAGCCG‑AATTCCCGATGCCGCAGGGCTGCCCACTCACCGTGGTGCAGCCGGACGCCGATGTAGTCGTCGCGCCGCAGCTGGTTTACGAATGGTCCGACAGCCTGTCGCGT‑CCCCATGAg                           >  2:276483/1‑150 (MQ=255)
                                                                                                                        tCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCG‑AATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGATGAAGTCGTCGCGCCGCAGCTGGTTTACGAATGGTCCGACAGCCTGTCGCGT‑CCCCATGAgc                          >  1:522455/1‑150 (MQ=255)
                                                                                                                         cATGATCGCCCCGGCGGTCATGCGCCTGACCGCCG‑AATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGATGAAGTCGTCGCGCCGCAGCTGGTTTACGAATGGTCCGACAGCCTGTCGCGT‑CCCCATGAgct                         >  1:1534392/1‑150 (MQ=255)
                                                                                                                          aTGATCGCCCCGGCGGTCATGCGCCTGACCGCCG‑AATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGATGAAGTCGTCGCGCCGCAGCTGGTTTACGAATGGTCCGACAGCCTGTCGCGT‑CCCCATGAgctg                        >  1:197652/1‑150 (MQ=255)
                                                                                                                           tGATCGCCCCGGCGGTCATGCGCCTGACCGCCG‑AATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGATGaa                                                                                     >  2:1158883/1‑89 (MQ=255)
                                                                                                                           tGATCGCCCCGGCGGTCATGCGCCTGACCGCCG‑AATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGATGaa                                                                                     <  1:1158883/89‑1 (MQ=255)
                                                                                                                           tGATCGCCCCGGCGGTCATGCGCCTGACCGCCG‑AATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGATGAAGTCGTCGCGCCGCAGCTGGTTTACGAATGGTCCGACAGCCTGTCGCGT‑CCCCATGAgctgc                       >  2:1077060/1‑150 (MQ=255)
                                                                                                                                gCCCCGGCGGTCATGCGCCTGACCGCCG‑AATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGATGAAGTCGTCGCGCCGCAGCTGGTTTACGAATGGTCCGACAGCCTGTCGCGT‑CCCCATGAGCTGCTGaaa                  <  1:1630737/150‑1 (MQ=255)
                                                                                                                                 ccccGGCGGTCATGCGCCTGACCGCCG‑AATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGATGAAGTCGTCGCGCCGCAGCTGGTTTACGAATGGTCCGGCAGCCTGTCGCGT‑CCCCATGAGCTGCTGAAAg                 >  1:1795169/1‑150 (MQ=255)
                                                                                                                                 ccccGGCGGTCATGCGCCTGACCGCCG‑AATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGATGAAGTCGTCGCGCCGCAGCTGGTTTACGAATGGTCCGACAGCCTGTCGCGT‑CCCCATGAGCTGCTGAAAg                 <  2:1534392/150‑1 (MQ=255)
                                                                                                                                  cccGGCGGTCATGCGCCTGACCGCCG‑AATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGATGAAGTCGTCGCGCCGCAGCTGGTTTACGAATGGTCCGACAGc                                              <  1:20768/121‑1 (MQ=255)
                                                                                                                                  cccGGCGGTCATGCGCCTGACCGCCG‑AATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGATGAAGTCGTCGCGCCGCAGCTGGTTTACGAATGGTCCGACAGc                                              >  2:20768/1‑121 (MQ=255)
                                                                                                                                   ccGGCGGTCATGCGCCTGACCGCCG‑AATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGATGAAGTCGGCGCGCCGCAGCTGGTTTACGAATGGTCCGACAGCCTGTCGCGT‑CCCCATGAGCTGCTGAAAGTg               <  1:39209/150‑1 (MQ=255)
                                                                                                                                    cggcggTCATGCGCCTGACCGCCG‑AATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGATGAAGTCGTCGCGCCGCAGCTGGTTTACGAATGGTCCGACAGCCTGTCGCGT‑CCCCATGAGCTGCTGAAAGTgg              <  1:2213243/150‑1 (MQ=255)
                                                                                                                                    cggcggTCATGCGCCTGACCGCCG‑AATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGATGAAGTCGTCGCGCCGCAGCTGGTTTACGAATGGTCCGACAGCCTGTCGCAT‑CCCCATGAGCTGCGGGAAGTgg              >  1:1707284/1‑150 (MQ=255)
                                                                                                                                      gctgTCATGCGTCTGACCGCCG‑AATTCCCGATGACGCAGGGCTGGCCGCTCACCGTGGTGCAGCCGGACGCCGATGAAGTCGTCGCGCCGCAGCTGGTTTACGAATGGTCCGACAGCCTGTCGCGT‑CCCCATGAGCTGCTGAAAGTGGCa            <  2:1066541/147‑1 (MQ=255)
                                                                                                                                      gcggTCATGCGCCTGACCGCCG‑AATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGATGAAGTCGTCGCGCCGCAGCTGGTTTACGAATGGTACGACAGCCTGTCGCGT‑CCCCATGAGCTGCTGAAAGTGGCa            >  1:1139514/1‑150 (MQ=255)
                                                                                                                                      gcggTCAGGCGCATGACCGCCG‑AATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGATGAAGTCGTCGCGCCGCAGCTGGTTTACGAATGGTCCGACAGCCTGTCGCGT‑CCCCATGAGCTGCTGAAAGTGGCa            >  1:2248793/1‑150 (MQ=255)
                                                                                                                                         gTCATGCGCCTGACCGCCG‑AATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGATGAAGTCGTCGCGCCGCAGCTGGTTTACGAATGGTCCGACAGCCTGTC‑CGTACCGCATGAGCTGCTGAAAGTGGCAGaa         <  1:1269791/150‑1 (MQ=255)
                                                                                                                                          tCATGCGCCTGACCGCCG‑AATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGATGAAGTCGTCGCGCCGCAGCTGGTTTACGAATGGTCCGACAGCCTGTCGCGT‑CCCCATGAGCTGCTGAAAGTGGCAGAAt        >  1:376745/1‑150 (MQ=255)
                                                                                                                                             tGCGCCTGACCGCCG‑AATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGATGAAGTCGTCGCGCCGCAGCTGGTTTACGAATGGTCCGACAGCCTGTCGCGT‑CCCCATGAGCTGCTGAAAGTGGCAGAATGCg     <  2:2138642/150‑1 (MQ=255)
                                                                                                                                             tGCGCCTGACCGCCG‑AATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGATGAAGTCGTCGCGCCGCAGCTGGTTTACGAATGGTCCGACAGCCTGTCGCGT‑CCCCATGAGCTGCTGAAAGTGGCAGAATGCg     <  2:672466/150‑1 (MQ=255)
                                                                                                                                             tGCGCCTGACCGCCG‑AATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGATGAAGTCGTCGCGCCGCAGCTGGTTTACGAATGGTCCGACAGCCTGTCGCGT‑CCCCATGAGCTGCTGAAAGTGGCAGAATGCg     <  1:2381330/150‑1 (MQ=255)
                                                                                                                                             tGCGCCTGACCGCCG‑AATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGATGAAGTCGTCGCGCCGCAGCTGGTTTACGAATGGTCCGACAGCCTGTCGCGT‑CCCCATGAGCTGCTGAAAGTGGCAGAATGCg     >  2:725205/1‑150 (MQ=255)
                                                                                                                                             ctccccTGCCCTCTG‑AATACCCGATGCCCCAGCGCTGCCCGCTCACCGTGGTGCAGCCTGACGCCGATGAACTCGTCCCGCCGCAGCTGGTTTACGAATGATCCGACAGCCTGTCGCGT‑CCCCATGATCTGCTGAAAGTGGCAGAATGCg     <  2:749798/146‑1 (MQ=255)
                                                                                                                                               cgcCTGACCGCCG‑AATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGATGAAGTCGTCGCGCCGCAGCTGGTTTACGAATGGTCCGACAGCCTGTCGCGT‑CCCCATGAGCTGCTGAAAGTGGCAGAATGCGGa   <  1:1046579/150‑1 (MQ=255)
                                                                                                                                                gcCTGACCGCCG‑AATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGATGAAGTCGTCGCGCCGCAGCTGGTTTACGAATGGTc                                                     <  2:1165416/100‑1 (MQ=255)
                                                                                                                                                gcCTGACCGCCG‑AATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGATGAAGTCGTCGCGCCGCAGCTGGTTTACGAATGGTc                                                     >  1:1165416/1‑100 (MQ=255)
                                                                                                                                                gcCTGACCGCCG‑AATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGATGAAGTCGTCGCGCCGCAGCTGGTTTACGAATGGTCCGACAGCCTGTCGCGT‑CCCCATGAGCTGCTGAAAGTGGCAGAATGCGGac  >  2:1286552/1‑150 (MQ=255)
                                                                                                                                                gcCTGACCGCCG‑AATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGATGAAGTCGTCGCGCCGCAGCTGGTTTACGAATGGTCCGACAGACTGTCGCGT‑CCCCATGAGCTGCTGAAAGTGGCAGAATGCGGag  >  1:749798/1‑149 (MQ=255)
                                                                                                                                                 ccTGACCGCCG‑AATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGATGAAGTCGTCGCGCCGCAGCTGGTTTACGAATGGTCCGACAGc                                              >  1:828447/1‑106 (MQ=255)
                                                                                                                                                 ccTGACCGCCG‑AATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGATGAAGTCGTCGCGCCGCAGCTGGTTTACGAATGGTCCGACAGc                                              <  2:828447/106‑1 (MQ=255)
                                                                                                                                                  |                                                                                                                                                     
GGCTGCGTGCCAGGCACCCCGGGCTACCGCTGGTGCTGATGGGCTTTTCGTTCGGTGGTTTCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCG‑AATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGATGAAGTCGTCGCGCCGCAGCTGGTTTACGAATGGTCCGACAGCCTGTCGCGT‑CCCCATGAGCTGCTGAAAGTGGCAGAATGCGGAC  >  NC_002947/1497700‑1497993

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑