| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,557,402 | C→G | 6.8% | G271G (GGG→GGC) | PP_1368 ← | glycosyltransferase domain‑containing protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,557,402 | 0 | C | G | 6.8% | 452.0 / 16.2 | 144 | G271G (GGG→GGC) | PP_1368 | glycosyltransferase domain‑containing protein |
| Reads supporting (aligned to +/- strand): ref base C (69/65); new base G (6/4); total (75/69) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.47e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.91e-01 | |||||||||||
Only 100 of 146 total aligned reads displayed.
GTCCCAGCAGGCACACAAACACCGGCCCCCCAGCCAGCAGATAAAAGTAATACGTAACCGCCCGCCATATCAGGATTGCCGCAGCTGCGGTCGAGCTGCCCACCAAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAGCGACAGCATCTGCACCAGGAAGCTGGGAATCCAGTGCAGGTCTACCCCCAAGCCCCGCAGCACCAGGTACAAGACGCTGTAGCGCAGTCCCCAGTGGATGCAGGTC > NC_002947/1557260‑1557549 | gTCCCAGCAGGCACACAAACACCGGCCCCCCAGCCAGCAGATAAAAGTAATACGTAACCGCCCGCCATATCAGGATTGCCGCAGCTGCGGTCGAGCTGCCCACCAAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGgcgc > 1:554606/1‑150 (MQ=255) cccAGCAGGCACACAAACACCGGCCGCGCAGCCAGCAGATAAAAGTAATACGTAACCGCCCGCCATATCAGGATTGCCGCAGCTGCGGTCGAGCTGCCCACCAAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGcgccg < 2:1161566/150‑1 (MQ=255) agcagGCACACAAACACCGGCCCCCCAGCCAGCAGATAAAAGTAATACGTAACCGCCCGCCATATCAGGATTGCCGCAGCTGCGGTCGAGCTGCCCACCAAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGcgccgaac < 2:741365/150‑4 (MQ=255) agGCACACAAACACCGGCCCCCCAGCCAGCAGATAAAAGTAATACGTAACCGCCCGCCATATCAGGATTGCCGCAGCTGCGGTCGAGCTGCCCACCAAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGgc > 1:1887494/1‑150 (MQ=255) cacacaAACACCGGCCCCCCAGCCAGCAGATAAAAGTAATACGTAACCGCCCGCCATATCAGGATTGCCGCAGCTGCGGTCGAGCTGCCCACCAAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGgcagc < 1:1364930/150‑1 (MQ=255) acacaAACACCGGCCCCCCAGCCAGCAGATAAAAGTAATACGTAACCGCCCGCCATATCAGGATTGCCGCAGCTGCGGTCGAGCTGCCCACCAAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGgcagca > 1:239993/1‑150 (MQ=255) acacaAACACCGGCCCCCCAGCCAGCAGATAAAAGTAATACGTAACCGCCCGCCATATCAGGATTGCCGCAGCTGCGGTCGAGCTGCCCACCAAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGgcagca > 1:1815998/1‑150 (MQ=255) acacaAACACCGGCCCCCCAGCCAGCAGATAAAAGTAATACGTAACCGCCCGCCATATCAGGATTGCCGCAGCTGCGGTCGAGCTGCCCACCAAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGgcagca > 1:2063857/1‑150 (MQ=255) acacaAACACCGGCCCCCCAGCCAGCAGATAAAAGTAATACGTAACCGCCCGCCATATCAGGATTGCCGCAGCTGCGGTCGAGCTGCCCACCAAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGgcagca > 2:546688/1‑150 (MQ=255) cacaAACACCGGCCCCCCAGCCAGCAGATAAAAGTCATACGAACACGCCCGCCATGCTAGGATTGTCGCATCTTGGGTGGAGCTGCCCACCGAGGGTTGCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGcagcag > 2:2080634/1‑150 (MQ=255) acaAACACCGGCCCCCCAGCCAGCAGATAAAAGTAATACGTAACCGCCCGCCATATCAGGATTGCCGCAGCTGCGGTCGAGCTGCCCACCAAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCGCCGGGgccgccgaa > 2:2313529/1‑140 (MQ=255) acaAACACCGGCCCCCCAGCCAGCAGATAAAAGTAATACGTAACCGCCCGCCATATCAGGATTGCCGCAGCTGCGGTCGAGCTGCCCACCAAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCGCCGGGgccgccgaa < 1:2313529/143‑4 (MQ=255) acaAACACCGGCCCCCCAGCCAGCAGATAAAAGTAATACGTAACCGCCCGCCATATCAGGATTGCCGCAGCTGCGGTCGAGCTGCCCACCAAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGcgccgc < 1:977326/139‑1 (MQ=255) acaAACACCGGCCCCCCAGCCAGCAGATAAAAGTAATACGTAACCGCCCGCCATATCAGGATTGCCGCAGCTGCGGTCGAGCTGCCCACCAAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGa > 1:232603/1‑150 (MQ=255) acaAACACCGGCCCCCCAGCCAGCAGATAAAAGTAATACGTAACCGCCCGCCATATCAGGATTGCCGCAGCTGCGGTCGAGCTGCCCACCAAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGa > 1:438994/1‑150 (MQ=255) acaAACACCGGCCCCCCAGCCAGCAGATAAAAGTAATACGTAACCGCCCGCCATATCAGGATTGCCGCAGCTGCGGTCGAGCTGCCCACCAAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGa > 1:119217/1‑150 (MQ=255) acaAACACCGGCCCCCCAGCCAGCAGATAAAAGTAATACGTAACCGCCCGCCATATCAGGATTGCCGCAGCTGCGGTCGAGCTGCCCACCAAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGa > 1:179027/1‑150 (MQ=255) aaaCACCGGCCCCCCAGCCAGCAGATAAAAGTAATACGTAACCGCCCGCCATATCAGGATTGCCGCAGCTGCGGTCGAGCTGCCCACCAAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCa < 2:16294/139‑1 (MQ=255) aaaCACCGGCCCCCCAGCCAGCAGATAAAAGTAATACGTAACCGCCCGCCATATCAGGATTGCCGCAGCTGCGGTCGAGCTGCCCACCAAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACt > 2:661323/1‑150 (MQ=255) aaCACCGGCCCCCCAGCCAGCAGATAAAAGTAATACGTAACAACCCGGCCTATGAGGATTGCCGCAGCTGCTGTCGAGCTGCCCACCAAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTg > 1:1856103/1‑150 (MQ=255) acacCGGCCCCCCAGCCAGTAGATAAAAGTAATACGTAACCGCCCGCCATATCAGGATTGCCGCAGCTGCGGTCGAGCTGCCCACCAAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGa > 2:819443/1‑150 (MQ=255) acacCGGCCCCCCAGCCAGCAGATAAAAGTAATACGTAACCGCCCGCCATATCAGGATTGCCGCAGCTGCGGTCGAGCTGCCCACCAAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCGCCGGGgccgccgaa > 1:1216872/1‑136 (MQ=255) acacCGGCCCCCCAGCCAGCAGATAAAAGTAATACGTAACCGCCCGCCATATCAGGATTGCCGCAGCTGCGGTCGAGCTGCCCACCAAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGa > 2:2377451/1‑150 (MQ=255) acCGGCCCCCCAGCCAGCAGATAAAAGTAATACGTAACCGCCCGCCATATCAGGATTGCCGCAGCTGCGGTCGAGCTGCCCACCAAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAAt > 2:1699984/1‑150 (MQ=255) ccGGCCCCCCAGCCAGCAGATAAAAGTAATACGTCACCCTTCGCCATATCAGGATTGCCGCAGCTGCGGTCGAGCTGCCCACCAAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAAtt < 1:1933127/150‑1 (MQ=255) gCCCCCCAGCCAGCAGATAAAAGTAATACGTAACCGCCCGCCATATCAGGATTGCCGCAGCTGCGGTCGAGCTGCCCACCAAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAATTGGc < 2:232603/150‑1 (MQ=255) ccccAGCCAGCAGATAAAAGTAATACGTAACCGCCCGCCATATCAGGATTGCCGCAGCTGCGGTCGAGCTGCCCACCAAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAATTGGCCgg > 2:175051/1‑150 (MQ=255) ccccAGCCAGCAGATAAAAGTAATACGTAACCGCCCGCCATATCAGGATTGCCGCAGCTGCGGTCGAGCTGCCCACCAAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAATTGGCCgg > 2:1482624/1‑150 (MQ=255) cccAGCCAGCAGATAAAAGTAATACGTAACCGCCCGCCATATCAGGATTGCCGCAGCTGCGGTCGAGCTGCCCACCAAGGGTGTCAAAAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGaa > 2:1306982/1‑141 (MQ=255) agcagATAAAAGTAATACGTACCCGCCCGCCATATTAGGATTGCCGCAGCTGCGGTCGAGCTGCCCACCAAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAGc < 1:11847/150‑1 (MQ=255) agcagATAAAAGTAATACGTAACCGCCCGCCATATCAGGATTGCCGCAGCTGCGGTCGAGCTGCCCACCAAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAGc < 1:1482624/150‑1 (MQ=255) agcagATAAAAGTAATACGTAACCGCCCGCCATATCAGGATTGCCGCAGCTGCGGTCGAGCTGCCCACCAAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAGc < 2:438994/150‑1 (MQ=255) gATAAAAGTAATACGTAACCGCCCGCCATATCAGGATTGCCGCCGCTGCGGTCGAGCTGCCCACCAAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAGCGACa < 2:2085661/150‑1 (MQ=255) tAAAAGTAATACGTAACCGCCCGCCATATCAGGATTGCCGCAGCTGCGGTCGAGCTGCCCACCAGGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGgcagc > 1:1262168/1‑120 (MQ=255) tAAAAGTAATACGTAACCGCCCGCCATATCAGGATTGCCGCAGCTGCGGTCGAGCTGCCCACCAGGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGgcagc < 2:1262168/120‑1 (MQ=255) acaCGTAACCGCCCGCCATATCACGATTGCCGCAGCTGCGGTCGAGCTGGCCACCAAGGGTGTCAACAGGCTGGCCGGCGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAGCGACAGCATCTGCAc < 2:357731/148‑1 (MQ=255) aTACGTAACCGCCCGCCATATCAGGATTGCCGCAGCTGTGGTCGAGCTGCCCACCAAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAGCGACAGCATCTGCAc < 2:1373999/150‑1 (MQ=255) aTACGTAACCGCCCGCCATATCAGGATTGCCGCAGCTGCGGTCGAGCTGCCCACCAAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAGCGACAGCATCTGCAc < 2:2251299/150‑1 (MQ=255) gTAACCGCCCGCCATATCAGGATTGCCGCAGCTGCGGTCGAGCTGCCCACCAAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGgcagca > 1:2228629/1‑109 (MQ=255) gTAACCGCCCGCCATATCAGGATTGCCGCAGCTGCGGTCGAGCTGCCCACCAAGGGTGTCAACAGGCTGGCCCAGGCCAGCTCGGCGGCGCGGCCGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAGCGACAGCATCTGCACAAgg > 2:1059498/1‑150 (MQ=255) aCCGCCCGCCATATCAGGATTGCCGCAGCTGCGGTCGAGCTGCCCACCAAGGGTGTCAACATGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGa > 2:418739/1‑108 (MQ=255) cgcccgccATATCAGGATTGCCGCAGCTGCGGTCGAGCTGCCCACCAAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAGCGACAGCATCTGCACCAGGAAGCt < 2:1905460/150‑1 (MQ=255) gcccgccATATCAGGATTGCCGCAGCTGCGGTCGAGCTGCCCACCAAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAGCGACAGCATCTGCACCAGGAAGCTg < 1:2377451/150‑1 (MQ=255) gcccgccATATCAGGATTGCCGCAGCTGCGGTCGAGCTGCCCACCAAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAGCGACAGCATCTGCACCAGGAAGCTg < 2:1815998/150‑1 (MQ=255) cccgccATATTAGGATTGCCGCAGCCGCGGTCGAGCTGCCCACCGATGGTGTCAACAGGCTGGCCGACGTCCTTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAGCGACAGCATCTGCACCAGGAAGCTgg < 2:1145894/150‑1 (MQ=255) cccgccATATCAGGATTGCCGCAGCTGCGGTCGAGCTGCCCACCAAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAGCGACAGCATCTGCACCAGGAAGCTgg < 1:661323/150‑1 (MQ=255) gccATATCAGGATTGCCGCAGCTGCGGTCGAGCTGCCCACCAAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAGCGACAGCATCTGCACCAGGAAGCTGGGaa > 1:409295/1‑150 (MQ=255) ccATATCAGGATTGCCGCAGCTGCGGTCGAGCTGCCCACCAAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAGCGACAGCATCTGCACCAGGAAGCTGGGAAt > 2:414245/1‑150 (MQ=255) atacCAGGATTGCCGCAGCTGCGGTCGAGCTGCCCACCAAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAGCGACAGCATCTGCACCAGGAAGCTTGGAATcc < 1:1299883/150‑1 (MQ=255) tCAGGATTGCCGCAGGTGCGGTCGAGCTGCCCACCAAGGGTGTCAACAGGATGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAGCGACAGCATCTGCACCAGGAAGCTGGGAATCCAGt < 2:334709/150‑1 (MQ=255) tCAGGATTGCCGCAGCTGCGGTCGAGCTGCCCACCAAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAGCGACAGCATCTGCACCAGGAAGCTgg > 1:1317258/1‑141 (MQ=255) tCAGGATTGCCGCAGCTGCGGTCGAGCTGCCCACCAAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAGCGACAGCATCTGCACCAGGAAGCTGGGAATCCAGt > 2:1453398/1‑150 (MQ=255) ggATTGCCGCAGCTGCGGTCGAGCTGCCCACCAAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAGCGACAGCATCTGCACCAGGAAGCTGGGAATCCAGTGCa < 2:1887494/150‑1 (MQ=255) gATTGCCGCAGCTGCGGTCGAGCTGCCCACCAAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAGCGACAGCATCTGCACCAGGAAGCTGGGAATCCAGTGCAg < 1:1729081/150‑1 (MQ=255) gATTGCCGCAGCTGCGGTCGAGCTGCCCACCAAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAGCGACAGCATCTGCACCAGGAAGCTGGGAACCCAGTGCAg < 2:1774894/150‑1 (MQ=255) aTTGCCGCAGCTGCGGTCGAGCTGCCCACCAAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAGCGACAGCATCTGCACCAGGAAGCTGGGAATCCa < 1:407930/143‑1 (MQ=255) aTTGCCGCAGCTGCGGTCGAGCTGCCCACCAAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAGCGACAGCATCTGCACCAGGAAGCTGGGAATCCa > 2:407930/1‑143 (MQ=255) aTTGCCGCAGCTGCGGTCGAGCTGCCCACCAAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAGCGACAGCATCTGCACCAGGAAGCTGGGAATCCAGTGCAgg > 1:1700527/1‑150 (MQ=255) ttGCCGCAGCTGCGGTCGAGCTGCCCACCAAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAGCGACAGCATCTGCACCAGGAAGCTGGGAATCCAGTGCAGGt < 1:819443/150‑1 (MQ=255) cGCAGCTGCGGTCGAGCTGCCCACCAAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAGCGACAGCATCTGCACCAGGAAGCTg < 1:717909/130‑1 (MQ=255) cGCAGCTGCGGTCGAGCTGCCCACCAAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAGCGACAGCATCTGCACCAGGAAGCTg > 2:717909/1‑130 (MQ=255) cGCAGCTGCGGTCGAGCTGCCCACCAAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAGCGACAGCATCTGCACCAGGAAGCTGGGAATCCAGTGCAGGTCTAc > 1:1102054/1‑150 (MQ=255) cAGCTGCGGTCGAGCTGCCCACCAAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAGCGACAGCATCTGCACCAGGAAGCTGGGAATCCAGTGCAGGTCTAccc < 2:1820742/150‑1 (MQ=255) gCGGTCGAGCTGCCCACCAAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAGCGACAGCATCTGCACCAGGAAGCTGGGAATCCAGTGCAGGTCTACCCCCAAg < 2:8819/150‑1 (MQ=255) tCGAGCTGCCCACCAAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAGCGACAGCATCTGCACCAGGAAGCTGGGAATCCAGTGCAGGTCTACCCCCAAGcccc > 1:1237990/1‑150 (MQ=255) aGCTGCCCACCAAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAGCGACAGCATCTGCACCAGGAAGCTGGGAATCCAGTGCAGGTCTACCCCCAAGCCCCgca < 2:658946/150‑1 (MQ=255) ccaccaAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAGCGACAGCATCTGCACCAGGAAGCTGGGAATCCAg < 2:1370863/119‑1 (MQ=255) ccaccaAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAGCGACAGCATCTGCACCAGGAAGCTGGGAATCCAg > 1:1370863/1‑119 (MQ=255) accaAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCt > 2:555168/1‑80 (MQ=255) accaAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAGCGACAGCATCTGCACCAGGAAGCTGGGAATCCAGTGc < 1:1499940/120‑1 (MQ=255) accaAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAGCGACAGCATCTGCACCAGGAAGCTGGGAATCCAGTGCAGGTCTACCCCCAAGCCCCGCAGCACCAgg < 2:1346365/150‑1 (MQ=255) accaAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAGCGACAGCATCTGCACCAGGAAGCTGGGAATCCAGTGCAGGTCTACCCCCAAGCCCCGCAGCACCAgg > 1:196061/1‑150 (MQ=255) ccaAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAGCGACAGCATCTGCACCAGGAAGCTgg < 2:1959417/108‑1 (MQ=255) ccaAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAGCGACAGCATCTGCACCAGGAAGCTgg > 1:1959417/1‑108 (MQ=255) caAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAGCGACAGCATCTGCACCAGGAAGCTg < 2:314622/106‑1 (MQ=255) caAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAGCGACAGCATCTGCACCAGGAAGCTg > 1:314622/1‑106 (MQ=255) aaGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAGCGACAGCATCTGCACCAGGAAGCTGGGAATCCAGTGCAGGTCTACCCCCAAGCCCCGCAGCACCAGGTAc > 1:324280/1‑150 (MQ=255) gggTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAGCGACAGCATCTGCACCAGGAAGCTGGGAATCCAGTGCAGGTCTACCCCCAAGCCCCGCAGCACCAGGTACaa < 1:2034459/150‑1 (MQ=255) gggTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAGCGACAGCATCTGCACCAGGAAGCTGGGAATCCAGTGCAGGTCTACCCCCAAGCCCCGCAGCACCAGGTACaa < 1:649259/150‑1 (MQ=255) aaCAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGa > 2:1656025/1‑70 (MQ=255) aaCAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGa < 1:1656025/70‑1 (MQ=255) aaCAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAGCGACAGCATCTGCACCAGGAAGCTGGGAATCCa < 1:1641331/104‑1 (MQ=255) gCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAGCGACAGCATCTGCACCAGGAAGCTGGGAATCCAGTGCAGGTCTACCCCCAAGCCCCGCAGCACCAGGTACAAGACGCTGTAgcg > 1:2234192/1‑150 (MQ=255) tGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAGCGACAGCATCTGCACCAGGAAGCTGGGAATCCAGTGCAGGTCTACCCCCAAGCCCCGCAGCACCAGGTACAAGACGCTGTAGCGCa < 2:2234192/150‑1 (MQ=255) tGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAGCGACAGCATCTGCACCAGGAAGCTGGGAATCCAGTGCAGGTCTACCCCCAAGCCCCGCAGCACCAGGTACAAGACGCTGTAGCGCa > 1:133285/1‑150 (MQ=255) tGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAGCGACAGCATCTGCACCAGGAAGCTGGGAATCCAGTGCAGGTCTACCCCCAAGCCCCGCAGCACCAGGTACAAGACGCTGTAGCGCa < 2:133285/150‑1 (MQ=255) tGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAGCGACAGCATCTGCACCAGGAAGCTGGGAATCCAGTGCACGTCTACCCCCAAGACCCGCAGCACCAGGTACAAGACGCTGTAGCGCa > 2:679087/1‑150 (MQ=255) ggCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAGCGACAGCATCTGCACCAGGAAGCTgg < 1:1406076/89‑1 (MQ=255) ccGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAGCGACAGCATCTGCACCAGGAAGCTGGGAATCCAGTGCAGGTCTACCCCCAAGCCCCGCAGCACCAGGTACAAGACGCTGTAGCGCAGTc < 1:799690/150‑1 (MQ=255) gTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAGCGACAGCATCTGCACCAGGAAGCTGGGAATCCAGTGCAGGTCTACCCCCAAGCCCCGCAGCACCAGGTACAAGACGCTGTAGCGCAGTCCCCAg > 2:1554395/1‑150 (MQ=255) cAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAGCGACAGCATCTGCACCAGGAAGCTGGGAATCCAGTGCAGGTCTACCCCCAAGCCCCGCAGCACCAGGTACAAGACGCTGTAGCGCAGTCCCCAGTg < 2:2063857/150‑1 (MQ=255) ttCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAGCGACAGCATCTGCACCAGGAAGCTGGGAATCCAGTGCAGGTCTACCCCCAAGCCCCGCAGCACCAGGTACAAGACGCTGTAGCGCAGTCCCCAGTGGAt > 1:107454/1‑150 (MQ=255) ctggcggcGCCGGGGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAGCGACAGCATCTGCACCAGGAAGCTGGGAATCCAGTGCAGGTCTACCCCCAAGCCCCGCAGCACCAGGTACAAGACGCTGTAGCGCAGTCCCCAGTGGATg > 2:1595813/3‑150 (MQ=255) tggcggcGCCGGGGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAGCGACAGCATCTGCACCAGGAAGCTGGGAATCCAGTGCAGGTCTACCCCCAAGCCCCGCAGCACCAg < 2:682140/114‑1 (MQ=255) tggcggcGCCGGGGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAGCGACAGCATCTGCACCAGGAAGCTGGGAATCCAGTGCAGGTCTACCCCCAAGCCCCGCAGCACCAg > 1:682140/2‑115 (MQ=255) tggcggcGCCGGGGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAGCGACAGCATCTGCACCAGGAAGCTGGGAATCCAGTGCAGGTCTACCCCCAAGCCCCGCAGCACCAGGTACAAGACGCTGTAGCGCAGTCCCCAGTGGATGc > 2:1163312/2‑150 (MQ=255) ggcggcCCCGGCGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAGCGACAGCATCTGCACCAGGAAGCTGGGAATCCAGTGCAGGTCTACCCCCAAGCCCCGCAGCACCAGGTACAAGACGCTGTAGCGCAGTCCCCAGTGGATGCa > 1:1038481/1‑150 (MQ=255) gcggcCCCGGCGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAGCGACAGCATCTGCACCAGGAAGCTGGGAATCCAGTGCAGGTCTACCCCCAAGCCCCGCAGCACCAGGTACAAGACGCTGTAGCGCAGTCCCCAGTGGATGCAg > 1:404199/1‑150 (MQ=255) gcCCCGGCGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAGCGACAGCATCTGCACCAGGAAGCTGGGAATCCAGTGCAGGTCTACCCCCAAGCCCCGCAGCACCAGGTACAAGACGCTGTAGCGCAGTCCCCAGTGGATGCAGGTc < 2:2365716/150‑1 (MQ=255) cccGGCGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAGCGACAGCATCTGCACCAGGAAGCTGGGAATCCAGTGCAGGTCTACCCCCAAGCCCCGCAGCACCAGGTa > 2:201704/1‑111 (MQ=255) | GTCCCAGCAGGCACACAAACACCGGCCCCCCAGCCAGCAGATAAAAGTAATACGTAACCGCCCGCCATATCAGGATTGCCGCAGCTGCGGTCGAGCTGCCCACCAAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGCCAGGCAGCAGACTGAATTGGCCGGCGCTGAGCGACAGCATCTGCACCAGGAAGCTGGGAATCCAGTGCAGGTCTACCCCCAAGCCCCGCAGCACCAGGTACAAGACGCTGTAGCGCAGTCCCCAGTGGATGCAGGTC > NC_002947/1557260‑1557549 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |