| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 12,143 | T→C | 6.2% | S347S (AGT→AGC) | dnaN → | DNA polymerase III subunit beta |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 12,143 | 0 | T | C | 6.2% | 292.2 / 5.5 | 97 | S347S (AGT→AGC) | dnaN | DNA polymerase III subunit beta |
| Reads supporting (aligned to +/- strand): ref base T (51/40); new base C (3/3); total (54/43) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.73e-01 | |||||||||||
CCCGAGCAGGAAGAAGCCGAAGAAGAAATCAGCGTGGACTACGAAGGTAGCTCGCTGGAGATTGGTTTCAACGTCAGCTACTTGCTGGACGTGCTGGGCGTGATGACTACTGAGCAAGTTCGTCTGATCTTGTCCGATTCAAACAGCAGTGCGCTGCTGCAGGAAGCTGGCAATGACGATTCTTCCTACGTTGTCATGCCGATGCGCCTGTAACCTGTAGCAGGCGAAATGTCCCTTCGACGTATCATGGTCACCGCGGTGCGCAACTTGCACCCGGTGACACTCTTACCCTCCCCC > NC_002947/11994‑12290 | cccGAGCAGGAAGAAGCCGAAGAAGAAATCAGCGTGGACTACGAAGGTAGCTCGCTGGAGATTGGTTTCAACGTCAGCTACTTGCTGGACGTGCTGGGCGTGATGACTACTGAGCAAGTTCGTCTGATCTTGTCCGATTCAAACAGCAGt > 2:1352430/1‑150 (MQ=255) ccGAGCAGGAAGAAGCCGAAGAAGAAATCAGCGTGGACTACGAAGGTAGCTCGCTGGAGATTGGTTTCAACGTCAGCTACTTGCTGGACGTGCTGGGCGTGATGACTACTGAGCAAGTTCGTCTGATCTTGTCCGATTCAAACAGCAGTg > 1:1566937/1‑150 (MQ=255) gCAGGAAGAAGCCGAAGAAGAAATCAGCGTGGACTACGAAGGTAGCTCGCTGGAGATTGGTTTCAACGTCAGCTACTTGCTGGACGTGCTGGGCGTGATGACTACTGAGCAAGTTCGTCTGATCTTGTCCGATTCAAACAGCAGTGCgct < 1:400201/150‑1 (MQ=255) ggAAGAAGCCGAAGAAGAAATCAGCGTGGACTACGAAGGTAGCTCGCTGGAGATTGGTTTCAACGTCAGCTACTTGCTGGACGTGCTGGGCGTGATGACTACTGAGCAAGTTCGTCTGATCTTGTCCGATTCAAACAGCAGTGCgctgct > 1:68565/1‑150 (MQ=255) agaagCCGAAGAAGAAATCAGCGTGGACTACGAAGGTAGCTCGCTGGAGATTGGTTTCAACGTCAGCTACTTGCTGGACGTGCTGGGCGTGATGACTACTGAGCAAGTTCGTCTGATCTTGTCCGATTCAAACAGCAGCGCActgctgtt < 2:163632/150‑3 (MQ=255) gaagCCGAAGAAGAAATCAGCGTGGACTACGAAGGTAGCTCGCTGGAGATTGGTTTCAACGTCAGCTACTTGCTGGACGTGCTGGGCGTGATGACTACTGAGCAAGTTCGTCTGATCTTGTCCGATTCAAACAGCAGTGCGCTGCTGCAg < 1:1826843/150‑1 (MQ=255) gaagaagaaATCAGCGTGGACTACGAAGGTAGCTCGCTGGAGATTGGTTTCAACGTCAGCTACTTGCTGGACGTGCTGGGCGTGATGACTACTGAGCAAGTTCGTCTGATCTTGTCCGATTCAAACAGCAGTGCGCTGCTGCAGGAAGCt > 2:778708/1‑150 (MQ=255) gaaATCAGCGTGGACTACGAACGTAGCTCGCTGGAGATTGGTTTCAACCTCAGCTACTTGCTGGACGTGCTGGGCGTGATGACTACTGAGCAAGTTCGTCTGATCTTGTCCGATTCAAACAGCAGTGCGCTGCTGCAGGAAGCTGGCCAt > 2:1802825/1‑150 (MQ=255) aaTCAGCGTGGACTACGAAGGTAGCTCGCTGGAGATTGGTTTCAACGTCAGCTACTTGCTGGACGTGCTGGGCGTGATGACTACTGAGCAAGTTCGTCTGATCTTGTCCGATTCAAACAGCAGTGCGCTGCTGCAGGAAGCTGGCAATGa < 2:1502038/150‑1 (MQ=255) aaTCAGCGTGGACTACGAAGGTAGCTCGCTGGAGATTGGTTTCAACGTCAGCTACTTGCTGGACGTGCTGGGCGTGATGACTACTGAGCAAGTTCGTCTGATCTTGTCCGATTCAAACAGCAGTGCGCTGCTGCAGGAAGCTGGCAATGa < 1:1096961/150‑1 (MQ=255) tCAGCGTGGACTACGAAGGTAGCTCGCTGGAGATTGGTTTCAACGTCAGCTACTTGCTGGACGTGCTGGGCGTGATGACTACTGAGCAAGTTCGTCTGATCTTGTCCGATTCAAACAGCAGTGCGCTGCTGCAGGAAGCTGGCAATGACg > 2:443923/1‑150 (MQ=255) tGGACTACGAAGGTAGCTCGCTGGAGATTGGTTTCAACGTCAGCTACTTGCTGGACGTGCTGGGCGTGATGACTACTGAGCAAGTTCGTCTGATCTTGTCCGATTCAAACAGCAGCGCActgctgtt < 2:1713995/127‑3 (MQ=255) tGGACTACGAAGGTAGCTCGCTGGAGATTGGTTTCAACGTCAGCTACTTGCTGGACGTGCTGGGCGTGATGACTACTGAGCAAGTTCGTCTGATCTTGTCCGATTCAAACAGCAGCGCActgctgtt > 1:1713995/1‑125 (MQ=255) ggACTACGAAGGTAGCTCGCTGGAGATTGGTTTCAACGTCAGCTACTTGCTGGACGTGCTGGGCGTGATGACTACTGAGCAAGTTCGTCTGATCTTGTCCGATTCAAACAGCAGTGCGCTGCTGCAGGAAGCTGGCAATGACGAttcttc > 2:2038769/1‑150 (MQ=255) cTACGAAGGTAGCTCGCTGGAGATTGGTTTCAACGTCAGCTACTTGCTGGACGTGCTGGGCGTGATGACTACTGAGCAAGTTCGTCTGATCTTGTCCGATTCAAACAGCAGTGCGCTGCTGCAGGAAGCTGGCAATGACGATTCTTCCTa < 1:1650143/150‑1 (MQ=255) tACGAAGGTAGCTCGCTGGAGATTGGTTTCAACGTCAGCTACTTGCTGGACGTGCTGGGCGTGATGACTACTGAGCAAGTTCGTCTGATCTTGTCCGATTCAAACAGCAGTGCgctg > 2:1008172/1‑117 (MQ=255) tACGAAGGTAGCTCGCTGGAGATTGGTTTCAACGTCAGCTACTTGCTGGACGTGCTGGGCGTGATGACTACTGAGCAAGTTCGTCTGATCTTGTCCGATTCAAACAGCAGTGCgctg < 1:1008172/117‑1 (MQ=255) gAAGGTAGCTCGCTGGAGATTGGTTTCAACGTCAGCTACTTGCTGGACGTGCTGGGCGTGATGACTACTGAGCAAGTTCGTCTGATCTTGTCCGATTCAAACAGCAGTGCGCTGCTGCAGGAAGCTGGCAATGACGATTCTTCCTACGtt < 1:778708/150‑1 (MQ=255) gAAGGTAGCTCGCTGGAGATTGGTTTCAACGTCAGCTACTTGCTGGACGTGCTGGGCGTGATGACTACTGAGCAAGTTCGTCTGATCTTGTCCGATTCAAACAGCAGTGCGCTGCTGCAGGAAGCTGGCAATGACGATTCTTCCTACGtt < 2:68565/150‑1 (MQ=255) gCTCGCTGGAGATTGGTTTCAACGTCAGCTACTTGCTGGACGTGCTGGGCATGATGACTACTGAGCAAGTTCGTCTGATCTTGTCCGATTCAAACAGCAGTGCGCTGCTGCAGGAAGCTGGCAATGACGATTCTTCCTACGTTGTCATGc < 1:1352430/150‑1 (MQ=255) cTCGCTGGAGATTGGTTTCAACGTCAGCTACTTGCTGGACGTGCTGGGCGTGATGACTACTGAGCAAGTTCGTCTGATCTTGTCCGATTCAAACAGCAGCGCActgctgtt < 2:1294914/111‑3 (MQ=255) cTCGCTGGAGATTGGTTTCAACGTCAGCTACTTGCTGGACGTGCTGGGCGTGATGACTACTGAGCAAGTTCGTCTGATCTTGTCCGATTCAAACAGCAGCGCActgctgtt > 1:1294914/1‑109 (MQ=255) cTGGAGATTGGTTTCAACGTCAGCTACTTGCTGGACGTGCTGGGCGTGATGACTACTGAGCAAGTTCGTCTGATCTTGTCCGATTCAAACAGCAGTGCGCTGCTGCAGGAAGCTGGCAATGACGATTCTTCCTACGTTGTCATGCCGATg > 2:261699/1‑150 (MQ=255) cTGGAGATTGGTTTCAACGTCAGCTACTTGCTGGACGTGCTGGGCGTGATGACTACTGAGCAAGTTCGTCTGATCTTGTCCGATTCAAACAGCAGTGCGCTGCTGCAGGAAGCTGGCAATGACGATTCTTCCTACGTTGTCATGCCGATg > 1:2317955/1‑150 (MQ=255) ggTTTCAACGTCAGCTACTTGCTGGACGTGCTGGGCGTGATGACTACTGAGCAAGTTCGTCTGATCTTGTCCGATTCAAACAGCAGTGCGCTGCTGCAGGAAGCTGGCCATGACGATTCTTCCGACGTTGTCATGCCGATGCGCCTGTaa < 1:1802825/150‑1 (MQ=255) tttCAACGTCAGCTACTTGCTGGACGTGCTGGGCGTGATGACTACTGAGCAAGTTCGTCTGATCTTGTCCGATTCAAACAGCAGTGCGCTGCTGCAGGAAGCTGGCAATGACGATTCTTCCTACGTTGTCATGCCGATGCGCCTGTAAcc > 2:2113044/1‑150 (MQ=255) cAACGTCAGCTACTTGCTGGACGTGCTGGGCGTGATGACTACTGAGCAAGTTCGTCTGATCTTGTCCGATTCAAACAGCAGTGCGCTGCTGCAGGAAGCTGGCAATGACGATTCTTCCTACGTTGTCATGCCGATGCGCCTGTAACCTGt < 2:1813748/150‑1 (MQ=255) gTCAGCTACTTGCTGGACGTGCTGGGCGTGATGACTACTGAGCAAGTTCGTCTGATCTTGTCCGATTCAAACAGCAGTGCGCTGCTGCAGGAAGCTGGCAATGACGATTCTTCCTACGTTGTCATGCCGATGCGCCTGTAACCTGTAGCa > 2:2224448/1‑150 (MQ=255) tCAGCTACTTGCTGGACGTGCTGGGCGTGATGACTACTGAGCAAGTTCGTCTGATCTTGTCCGATTCAAACAGCAGTGCGCTGCTGCAGGAAGCTGGCAATGACGATTCTTCCTACGTTGTCATGCCGATGCGCCTGTAACCTGTAGCAg > 1:2081624/1‑150 (MQ=255) cAGCTACTTGCTGGACGTGCTGGGCGTGATGACTACTGAGCAAGTTCGTCTGATCTTGTCCGATTCAAACAGCAGTGCGCTGCTGCAGGAAGCTGGCAATGACGATTCTTCCTACGTTGTCATGCCGATGCGCCTGTAACCTGTAGCAgg < 1:727149/150‑1 (MQ=255) gCTGGACGTGCTGGGCGTGATGACTACTGAGCAAGTTCGTCTGATCTTGTCCGATTCAAACAGCAGTGCGCTGCTGCAGGAAGCTGGCAATGACGATTCTTCCTACGTTGTCATGCCGATGCGCCTGTAACCTGTAGCAGGCGAAATGTc < 1:2038769/150‑1 (MQ=255) cTGGACGTGCTGGGCGTGATGACTACTGAGCAAGTTCGTCTGATCTTGTCCGATTCAAACAGCAGTGCGCTGCTGCAGGAAGCTGGCAATGACGATTCTTCCTACGTTGTCATGCCGATGCGCCTGTAACCTGTAGCAGGCGAAATGTcc < 1:261699/150‑1 (MQ=255) tGGACGTGCTGGGCGTGATGACTACTGAGCAAGTTCGTCTGATCTTGTCCGATTCAAACAGCAGTGCGCTGCTGCAGGAAGCTGGCAATGACGATTCTTCCTACGTTGTCATGCCGATGCGCCt < 2:545775/124‑1 (MQ=255) tGGACGTGCTGGGCGTGATGACTACTGAGCAAGTTCGTCTGATCTTGTCCGATTCAAACAGCAGTGCGCTGCTGCAGGAAGCTGGCAATGACGATTCTTCCTACGTTGTCATGCCGATGCGCCt > 1:545775/1‑124 (MQ=255) tGGACGTGCTGGGCGTGATGACTACTGAGCAAGTTCGTCTGATCTTGTCCGATTCAAACAGCAGTGCGCTGCTGCAGGAAGCTGGCAATGACGATTCTTCCTACGTTGTCATGCCGATGCGCCTGTAACCTGTAGCAGGCGAAATGTccc > 2:902478/1‑150 (MQ=255) aCGTGCTGAGCGTGATGACTACTGAGCAAGTTCGTCTGATCTTGTCCGATTCAAACAGCAGTGCGCTGCTGCAGGAAGCTGGCAATGACGATTCTTCCTACGTTGTCATGCCGATGCGCCTGTAACCTGTAGCAGGCGAAATGTCCCTTc > 2:91643/1‑150 (MQ=255) gTGCTGGGCGTGATGACTACTGAGCAAGTTCGTCTGATCTTGTCCGATTCAAACAGCAGTGCGCTGCTGCAGGAAGCTGGCAATGACGATTCTTCCTACGTTGTCATGCCGATGCGCCTGTAACCTg < 1:959850/127‑1 (MQ=255) gTGCTGGGCGTGATGACTACTGAGCAAGTTCGTCTGATCTTGTCCGATTCAAACAGCAGTGCGCTGCTGCAGGAAGCTGGCAATGACGATTCTTCCTACGTTGTCATGCCGATGCGCCTGTAACCTg > 2:959850/1‑127 (MQ=255) tGCTGGGCGTGATGACTACTGAGCAAGTTCGTCTGATCTTGTCCGATTCAAACAGCAGTGCGCTGCTGCAGGAAGCTGGCAATGACGATTCTTCCTACGTTGTCATGc > 2:1108774/1‑108 (MQ=255) tGCTGGGCGTGATGACTACTGAGCAAGTTCGTCTGATCTTGTCCGATTCAAACAGCAGTGCGCTGCTGCAGGAAGCTGGCAATGACGATTCTTCCTACGTTGTCATGc < 1:1108774/108‑1 (MQ=255) gCTGGGCGTGATGACTACTGAGCAAGTTCGTCTGATCTTGTCCGATTCAAACAGCAGTGCGCTGCTGCAGGAAGCTGGCAATGACGATTCTTCCTACGTTGTCATGCCGATGCGCCTGTAACCTGTAGCAGGCGAAATGTCCCTTCGACg > 1:2391056/1‑150 (MQ=255) ggCGTGATGACTACTGAGCAAGTTCGTCTGATCTTGTCCGATTCAAACAGCAGTGCGCTGCTGCAGGAAGCTGGCAATGACGATTCTTCCTACGTTGTCATGCCGATGCGCCTGTAACCTGTAGCAGGCGAAATGTCCCTTCGACGTATc > 2:1993034/1‑150 (MQ=255) cGTGATGACTACTGAGCAAGTTCGTCTGATCTTGTCCGATTCAAACAGCAGTGCGCTGCTGCAGGAAGCTGGCAATGACGATTCTTCCTACGTTGTCATGCCGATGCGCCTGTAACCTGTAGCAGGCGAAATGTCCCTTCGACGTATCAt < 2:2025050/150‑1 (MQ=255) gTGATGACTACTGAGCAAGTTCGTCTGATCTTGTCCGATTCAAACAGCAGTGCGCTGCTGCAGGAAGCTGGCAATGACGATTCTTCCTACGTTGTCATGCCGATGCGCCTGTAACCTGTAGCAGGCGAAATGTCCCTTCGACGTATCATg > 2:2014956/1‑150 (MQ=255) gTGATGACTACTGAGCAAGTTCGTCTGATCTTGTCCGATTCAAACAGCAGTGCGCTGCTGCAGGAAGCTGGCAATGACGATTCTTCCTACGTTGTCATGCCGATGCGCCTGTAACCTGTAGCAGGCGAAATGTCCCTTCGACGTATCATg < 2:582050/150‑1 (MQ=255) tgatgaCTACTGAGCAAGTTCGTCTGATCGTGTCCGATTCAAACAGCAGTGCGCTGCTGCAGGAAGCTGGCAATGACGATTCTTCCTACGTTGTCATGCCGATGCGCCTGTAACCTGTAGCAGGCGAAATGTCCCTTCGACGTATCATgg > 1:66951/1‑150 (MQ=255) gatgaCTACTGAGCAAGTTCGTCTGATCTTGTCCGATTCAAACAGCAGTGCGCTGCTGCAGGAAGCTGGCAATGACGATTCTTCCTACGTTGTCATGCCGATGCGCCTGTAACCTGTAGCAGGCGAAATGTCCCTTCGACGTATCATGGt > 2:525356/1‑150 (MQ=255) tactGAGCAAGTTCGTCTGATCTTGTCCGATTCAAACAGCAGTGCGCTGCTGCAGGAAGCTGGCAATGACGAttct > 2:2238126/1‑76 (MQ=255) tactGAGCAAGTTCGTCTGATCTTGTCCGATTCAAACAGCAGTGCGCTGCTGCAGGAAGCTGGCAATGACGAttct < 1:2238126/76‑1 (MQ=255) actGAGCAAGTTCGTCTGATCTTGTCCGATTCAAACAGCAGTGCGCTGCTGCAGGAAGCTGGCAATGACGATTCTTCCTACGTTGTCATGCCGATGCGCCTGTAACCTGTAGCAGGCGAAATGTCCCTTCGACGTATCATGGTCACcggg > 2:355074/1‑148 (MQ=255) ctGAGCAAGTTCGTCTGATCTTGTCCGATTCAAACAGCAGTGCGCTGCTGCAGGAAGCTGGCAATGACGATTCTTCCTACGTTGTCATGc < 2:1963069/90‑1 (MQ=255) ctGAGCAAGTTCGTCTGATCTTGTCCGATTCAAACAGCAGTGCGCTGCTGCAGGAAGCTGGCAATGACGATTCTTCCTACGTTGTCATGc > 1:1963069/1‑90 (MQ=255) tGAGCAAGTTCGTCTGATCTTGTCCGATTCAAACAGCAGTGCGCTGCTGCAGGAAGCTGGCAATGACGATTCTTCCTACGTTGTCATGCCGATGCGCCTGTAACCTGTAGCAGGCGAAATGTCTCTTCGACGTATCATGGTCACCGCGGt > 1:496121/1‑150 (MQ=255) tGAGCAAGTTCGTCTGATCTTGTCCGATTCAAACAGCAGTGCGCTGCTGCAGGAAGCTGGCAATGACGATTCTTCCTACGTTGTCATGCCGATGCGCCTGTAACCTGTAGCAGGCGAAATGTCCCTTCGACGTATCATGGTCACCGCGGt > 2:1435790/1‑150 (MQ=255) tGAGCAAGTTCGTCTGATCTTGTCCGATTCAAACAGCAGTGCGCTGCTGCAGGAAGCTGGCAATGACGATTCTTCCTACGTTGTCATGCCGATGCGCCTGTAACCTGTAGCAGGCGAAATGTCCCTTCGACGTATCATGGTCACCGCGGt < 1:2113044/150‑1 (MQ=255) gAGCAAGTTCGTCTGATCTTGTCCGATTCAAACAGCAGTGCGCTGCTGCAGGAAGCTGGCAATGACGATTCTTCCTACGTTGTCATGCCGATGCGCCTGTAACCTGTAGCAGGCGAAATGTCCCTTCGACGTATCATGGTCACCGCGGTg > 1:187921/1‑150 (MQ=255) gCAAGTTCGTCTGATCTTGTCCGATTCAAACAGCAGTGCGCTGCTGCAGGAAGCTGGCAATGACGATTCTTCCTACGTTGTCATGCCGATGCGCCTGTAACCTGTAGCAGGCGAAATGTCCCTTCGACGTa < 1:1623308/131‑1 (MQ=255) gCAAGTTCGTCTGATCTTGTCCGATTCAAACAGCAGTGCGCTGCTGCAGGAAGCTGGCAATGACGATTCTTCCTACGTTGTCATGCCGATGCGCCTGTAACCTGTAGCAGGCGAAATGTCCCTTCGACGTa > 2:1623308/1‑131 (MQ=255) gCAAGTTCGTCTGATCTTGTCCGATTCAAACAGCAGTGCGCTGCTGCAGGAAGCTGGCAATGACGATTCTTCCTACGTTGTCATGCCGATGCGCCTGTAACCTGTAGCAGGCGAAATGTCCCTTCGACGTATCATGGTCACCGCGGTgc < 2:869165/149‑1 (MQ=255) gCAAGTTCGTCTGATCTTGTCCGATTCAAACAGCAGTGCGCTGCTGCAGGAAGCTGGCAATGACGATTCTTCCTACGTTGTCATGCCGATGCGCCTGTAACCTGTAGCAGGCGAAATGTCCCTTCGACGTATCATGGTCACCGCGGTgc > 1:869165/1‑149 (MQ=255) aGTTCGTCTGATCTTGTCCGATTCAAACAGCAGTGCGCTGCTGCAGGAAGCTGGCAATGACGATTCTTCCTACGTTGTCATGCCGATGCGCCTGTAACCTGTAGCAGGCGAAATGTCCCTTCGACGTAt > 2:2374707/1‑129 (MQ=255) aGTTCGTCTGATCTTGTCCGATTCAAACAGCAGTGCGCTGCTGCAGGAAGCTGGCAATGACGATTCTTCCTACGTTGTCATGCCGATGCGCCTGTAACCTGTAGCAGGCGAAATGTCCCTTCGACGTAt < 1:2374707/129‑1 (MQ=255) aGTTCGTCTGATCTTGTCCGATTCAAACAGCAGTGCGCTGCTGCAGGAAGCTGGCAATGACGATTCTTCCTACGTTGTCATGCCGATGCGCCTGTAACCTGTAGCAGGCGAAATGTCCCTTCGACGTATCATGGTCACCGCGGTGCGCaa < 1:1435790/150‑1 (MQ=255) ttCGTCTGATCTTGTCCGATTCAAACAGCAGTGCGCTGCTGCAGGAAGCTGGCAATGACGATTCTTCCTACGTTGTCATGCCGATGCGCCTGTAACCTGTAGCAGGCGAAATGTCCCTTCGACGTATCATGGTCACCGCGGTGCGCAACt < 2:134181/150‑1 (MQ=255) tCGTCTGATCTTGTCCGATTCAAACAGCAGTGCGCTGCTGCAGGAAGCTGGCAATGACGATTCTTCCTACGTTGTCATGCCGATGCGCCTGTAACCTGTAGCAGGCGAAATGTCCCTTCGACGTATCATGGTCACCGCGGTGCGCAACtt < 2:496121/150‑1 (MQ=255) tCGTCTGATCTTGTCCGATTCAAACAGCAGTGCGCTGCTGCAGGAAGCTGGCAATGACGATTCTTCCTACGTTGTCATGCCGATGCGCCTGTAACCTGTAGCAGGCGAAATGTCCCTTCGACGTATCATGGTCACCGCGGTGCGCAACtt < 2:1566937/150‑1 (MQ=255) tCTGATCTTGTCCGATTCAAACAGCAGTGCGCTGCTGCAGGAAGCTGGCAATGACGATTCTTCCTACGTTGTCATGCCGATGCGCCTGTAACCTGTAGCAGGCGAAATGTCCCTTCGACGTATCATGGTCACCGCGGTGCGCAACTTGCa > 1:1459175/1‑150 (MQ=255) tCTGATCTTGTCCGATTCAAACAGCAGTGCGCTGCTGCAGGAAGCTGGCAATGACGATTCTTCCTACGTTGTCATGCCGATGCGCCTGTAACCTGTAGCAGGCGAAATGTCCCTTCGACGTATCATGGTCACCGCGGTGCGCAACTTGCa > 2:2066047/1‑150 (MQ=255) tCTGATCTTGTCCGATTCAAACAGCAGTGCGCTGCTGCAGGAAGCTGGCAATGACGATTCTTCCTACGTTGTCATGCCGATGCGCCTGTAACCTGTAGCAGGCGAAATGTCCCTTCGACGTATCATGGTCACCGCGGTGCGCAACTTGCa > 1:265318/1‑150 (MQ=255) tGATCTTGTCCGATTCAAACAGCAGTGCGCTGCTGCAGGAAGATGGCAATGGCGATTCTTCCTACGTTGTCATGCCGATGCGCCTGTAACCTGTAGCAGGCGAAATGTCCCTTCGACGTATCATGGTCACCGCGGTGCGCAACTTGCAcc > 2:1784164/1‑150 (MQ=255) gATCTTGTCCGATTCAAACAGCAGTGCGCTGCTGCAGGAAGCTGGCAATGACGATTCTTCCTACGTTGTCATGCCGATgcgc < 1:2319430/82‑1 (MQ=255) gATCTTGTCCGATTCAAACAGCAGTGCGCTGCTGCAGGAAGCTGGCAATGACGATTCTTCCTACGTTGTCATGCCGATgcgc > 2:2319430/1‑82 (MQ=255) gATCTTGTCCGATTCAAACAGCAGTGCGCTGCTGCAGGAAGCTGGCAATGACGATTCTTCCTACGTTGTCATGCCGATGCGCCTGTAACCTGTAGCAGGCGAAATGTCCCTTCGACGTATCATGGTCACCGCGGTGCGCAACTTGCAccc > 1:2004677/1‑150 (MQ=255) tCTTGTCCGATTCAAACAGCAGTGCGCTGCTGCAGGAAGCTGGCAATGACGATTCTTCCTACGTTGTCATGCCGATGCGCCTGTAACCTGTAGCAGGCGAAATGt > 1:2217523/1‑105 (MQ=255) tCTTGTCCGATTCAAACAGCAGTGCGCTGCTGCAGGAAGCTGGCAATGACGATTCTTCCTACGTTGTCATGCCGATGCGCCTGTAACCTGTAGCAGGCGAAATGt < 2:2217523/105‑1 (MQ=255) cTTGTCCGATTCAAACAGCAGTGCGCTGCTGCAGGAAGCTGGCAATGACGATTCTTCCTACGTTGTCATGCCGATGCGCCTGTAACCTGTAGCAGGCGAAATGTCCCTTCGACGTAt < 2:1431332/117‑1 (MQ=255) cTTGTCCGATTCAAACAGCAGTGCGCTGCTGCAGGAAGCTGGCAATGACGATTCTTCCTACGTTGTCATGCCGATGCGCCTGTAACCTGTAGCAGGCGAAATGTCCCTTCGACGTAt > 1:1431332/1‑117 (MQ=255) cGATTCAAACAGCAGTGCGCTGCTGCAGGAAGCTGGCAATGACGATTCTTCCTACGTTGTCATGCCGATGCGCCTGTAACCTGTAGCAGGCGAAATGTCCCTTCGACGTATCATGGTCACCGCGGTGCGCAACTTGCACCCGGTGACAct > 2:1363032/1‑150 (MQ=255) gATTCAAACAGCAGTGCGCTGCTGCAGGAAGCTGGCAATGACGATTCTTCCTACGTTGTCATGCCGATGCGCCTGTAACCTGTAGCAGGCGAAATGTcc > 2:2066976/1‑99 (MQ=255) gATTCAAACAGCAGTGCGCTGCTGCAGGAAGCTGGCAATGACGATTCTTCCTACGTTGTCATGCCGATGCGCCTGTAACCTGTAGCAGGCGAAATGTcc < 1:2066976/99‑1 (MQ=255) gATTCAAACAGCAGTGCGCTGCTGCAGGAAGCTGGCAATGACGATTCTTCCTACGTTGTCATGCCGATGCGCCTGTAACCTGTAGCAGGCGAAATGTCCTTTCGACGGATCATGGTCACCGCGGTGCGCAACTTGCACCCGGTGACActc < 1:2224448/150‑1 (MQ=255) gATTCAAACAGCAGTGCGCTGCTGCAGGAAGCTGGCAATGACGATTCTTCCTACGTTGTCATGCCGATGCGCCTGTAACCTGTAGCAGGCGAAATGTCCCTTCGACGTATCATGGTCACCGCGGTGCGCAACTTGCACCCGGTGACActc > 2:1517446/1‑150 (MQ=255) cttcctgcagcagCGCACTGCTGTAGGAAGCTGGCAATGACGATTCTTCCTACGTTGTCATGCCGATGCGCCTGTAACCTGTCGCAGGCGAAATGTCACTTCGACGTATCATGGTCACCGCGGTGCGCAACTTGCACCCGGTGAGActct > 1:322941/8‑150 (MQ=255) aTTCAAACAGCAGTGCGCTGCTGCAGGAAGCTGGCAATGACGATTCTTCCTACGTTGTCATGCCGATGCGCCTGTAACCTGTAGCAGGCGAAATGTCCCTTCGACGTATCATGGTCACCGCgg < 1:166237/123‑1 (MQ=255) aTTCAAACAGCAGTGCGCTGCTGCAGGAAGCTGGCAATGACGATTCTTCCTACGTTGTCATGCCGATGCGCCTGTAACCTGTAGCAGGCGAAATGTCCCTTCGACGTATCATGGTCACCGCgg > 2:166237/1‑123 (MQ=255) aTTCAAACAGCAGTGCGCTGCTGCAGGAAGCTGGCAATGACGATTCTTCCTACGTTGTCATGCCGATGCGCCTGTAACCTGTAGCAGGCGAAATGTCCCTTCGACGTATCATGGTCACCGCGGTGCGCAACTTGCACCCGGt > 1:575492/1‑142 (MQ=255) aTTCAAACAGCAGTGCGCTGCTGCAGGAAGCTGGCAATGACGATTCTTCCTACGTTGTCATGCCGATGCGCCTGTAACCTGTAGCAGGCGAAATGTCCCTTCGACGTATCATGGTCACCGCGGTGCGCAACTTGCACCCGGt < 2:575492/142‑1 (MQ=255) aTTCAAACAGCAGTGCGCTGCTGCAGGAAGCTGGCAATGACGATTCTTCCTACGTTGTCATGCCGATGCGCCTGTAACCTGTAGCAGGCGAAATGTCCCTTCGACGTATCATGGTCACCGCGGTGCGCAACTTGCACCCGGTGACActct < 2:1432772/150‑1 (MQ=255) ttCAAACAGCAGTGCGCTGCTGCAGGAAGCTGGCAATGACGATTCTTCCTACGTTGTCATGCCGATGCGCCTGTAACCTGTAGCAGGCGAAATGTCCCTTCGACGTATCATGGTCACCGCGGTGCGCAACTTGCACCCGGTGACACTCtt > 1:2191887/1‑150 (MQ=255) tCAAACAGCAGTGCGCTGCTGCAGGAAGCTGGCAATGACGATTCTTCCTACGTTGTCATGCCGATGCGCCTGTAACCTGTAGCAGGCGAAATGTCCCTTCGACGTATCATGGTCACCGAGCTCCGCAACTTGCACCCGGTGACACTCTTa < 1:443923/150‑1 (MQ=255) aaaCAGCAGTGCGCTGCTGCAGGAAGCTGGCAATGACGATTCTTCCTACGTTGTCATGCCGATGCGCCTGTAACCTGTAGCAGGCGAAATGTCCCTTCGACGTATCATGGTCACCGCGGTGCGCAAc > 1:2317856/1‑127 (MQ=255) aaaCAGCAGTGCGCTGCTGCAGGAAGCTGGCAATGACGATTCTTCCTACGTTGTCATGCCGATGCGCCTGTAACCTGTAGCAGGCGAAATGTCCCTTCGACGTATCATGGTCACCGCGGTGCGCAAc < 2:2317856/127‑1 (MQ=255) aaaCAGCAGTGCGCTGCTGCAGGAAGCTGGCAATGACGATTCTTCCTACGTTGTCATGCCGATGCGCCTGTAACCTGTAGCAGGCGAAATGTCCCTTCGACGTATCATGGTCACCGCGGTGCGCAACTTGCACCCGGTGACACTCTTAcc > 1:3808/1‑150 (MQ=255) aaCAGCAGTGCGCTGCTGCAGGAAGCTGGCAATGACGATTCTTCCTACGTTGTCATGCCGATGCGCCTGTAACCTGTAGCAGGCGAAATGTCCCTTCGACGTATCATGGTCACCGCGGTGCGCAACTTGCACCCGGTGACACTCTTAccc > 1:1509055/1‑150 (MQ=255) cggcagTGCGCTGCTGCAGGAAGCTGGCAATGACGATTCTTCCTACGTTGTCATGCCGATGCGCCTGTAACCTGTAGCAGGCGAAATGTCCCTTCGACGTATCATGGTCACCGCGGTGCGCAACTTGCACCCGGTGACACTCTTACCCTc > 1:1985181/3‑150 (MQ=255) cagcagTGCGCTGCTGCAGGAAGCTGGCAATGACGATTCTTCCTACGTTGTCATGCCGATGCGCCTGTAACCTGTAGCAGGCGAAATGTCCCTTCGACGTATCATGGTCACCGCGGTGCGCAACTTGCACCCGGTGACACTCTTACCCTc > 2:802838/1‑150 (MQ=255) agcagTGCGCTGCTGCAGGAAGCTGGCAATGACGATTCTTCCTACGTTGTCATGCCGATGCGCCTGTAACCTGTAGCAGGCGAAATGTCCCTTCGACGTATCATGGTCACCGCGGTGCGCAACTTGCACCCGGTGACACTCTTACCCTcc < 1:2066047/150‑1 (MQ=255) agTGCGCTGCTGCAGGAAGCTGGCAATGACGATTCTTCCTACGTTGTCATGCCGATGCGCCTGTAACCTGTAGCAGGCGAAATGTCCCTTCGACGTATCATGGTCACCGCGGTGCGCAACTTGCACCCGGTGACACTCTTACCCTccccc > 2:2297348/1‑150 (MQ=255) | CCCGAGCAGGAAGAAGCCGAAGAAGAAATCAGCGTGGACTACGAAGGTAGCTCGCTGGAGATTGGTTTCAACGTCAGCTACTTGCTGGACGTGCTGGGCGTGATGACTACTGAGCAAGTTCGTCTGATCTTGTCCGATTCAAACAGCAGTGCGCTGCTGCAGGAAGCTGGCAATGACGATTCTTCCTACGTTGTCATGCCGATGCGCCTGTAACCTGTAGCAGGCGAAATGTCCCTTCGACGTATCATGGTCACCGCGGTGCGCAACTTGCACCCGGTGACACTCTTACCCTCCCCC > NC_002947/11994‑12290 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |